Miyakogusa Predicted Gene

Lj0g3v0292789.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292789.2 Non Chatacterized Hit- tr|I0Z677|I0Z677_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.3,6e-17,UNCHARACTERIZED,NULL; PX SERINE/THREONINE KINASE
(PXK),NULL; Nexin_C,Sorting nexin, C-terminal; seg,,CUFF.19584.2
         (332 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   279   2e-75
AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   278   5e-75
AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   135   3e-32

>AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr1:5243799-5248498 FORWARD
           LENGTH=1012
          Length = 1012

 Score =  279 bits (714), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 193/326 (59%), Gaps = 56/326 (17%)

Query: 1   MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSEKTKS------SSHLS 54
           +QL  IS SIEVWDFLSVDSQTY FSSSFSI+ETL+V    KP  KT +      S   +
Sbjct: 701 LQLQRISGSIEVWDFLSVDSQTYAFSSSFSIIETLTV----KPVNKTSTVATNIASMTQA 756

Query: 55  LPGSDPSAFRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSLPKRSGLESRKSPDNS 114
            PG  P   RREN S E+  +    RNNV+ D +K KV ++     K   ++ R   +N 
Sbjct: 757 APGPLP---RRENLSSENGISGQNMRNNVMVDDVKSKVKNLGNDHVKTPDVDVRNRKENG 813

Query: 115 GSNTDFLARKNAPSPNNLHKTVRGRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPXXXXXX 174
           G                      G   +D+VA A       +PTEWVPP L+ P      
Sbjct: 814 GLKV-------------------GTQHADDVACA------GLPTEWVPPKLTLPLLDLVD 848

Query: 175 XXXXXXXGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILW 234
                  GGWIRRKAFW AKQILQLGMGDA DDW++EK+ LLR+G+V+ASG++RVEQILW
Sbjct: 849 VVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKICLLRRGTVVASGIQRVEQILW 908

Query: 235 PDGIFLTKHXXXXXXXXXXXXXXXXXXXXTQVSSPTMSDEQKQEADRRAKFVYELMIENA 294
           PDG+F+TKH                     Q  S    +EQKQEA+RRAKFV+ELMIE A
Sbjct: 909 PDGVFMTKHPKR------------------QQQSSISEEEQKQEAERRAKFVHELMIEKA 950

Query: 295 PPAIVSLVGRKEYEQCARDLYFFLQV 320
           P  IVSL+G+KEYEQCA DLYFFLQV
Sbjct: 951 PATIVSLIGQKEYEQCAEDLYFFLQV 976


>AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr1:5243799-5248604 FORWARD
           LENGTH=1020
          Length = 1020

 Score =  278 bits (710), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 162/338 (47%), Positives = 198/338 (58%), Gaps = 58/338 (17%)

Query: 1   MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSEKTKS------SSHLS 54
           +QL  IS SIEVWDFLSVDSQTY FSSSFSI+ETL+V    KP  KT +      S   +
Sbjct: 701 LQLQRISGSIEVWDFLSVDSQTYAFSSSFSIIETLTV----KPVNKTSTVATNIASMTQA 756

Query: 55  LPGSDPSAFRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSLPKRSGLESRKSPDNS 114
            PG  P   RREN S E+  +    RNNV+ D +K KV ++     K   ++ R   +N 
Sbjct: 757 APGPLP---RRENLSSENGISGQNMRNNVMVDDVKSKVKNLGNDHVKTPDVDVRNRKENG 813

Query: 115 GSNTDFLARKNAPSPNNLHKTVRGRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPXXXXXX 174
           G                      G   +D+VA A       +PTEWVPP L+ P      
Sbjct: 814 GLKV-------------------GTQHADDVACA------GLPTEWVPPKLTLPLLDLVD 848

Query: 175 XXXXXXXGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILW 234
                  GGWIRRKAFW AKQILQLGMGDA DDW++EK+ LLR+G+V+ASG++RVEQILW
Sbjct: 849 VVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKICLLRRGTVVASGIQRVEQILW 908

Query: 235 PDGIFLTKHXXXXXXXXXXXXXXXXXXXXTQVSSPTMSDEQKQEADRRAKFVYELMIENA 294
           PDG+F+TKH                     Q  S    +EQKQEA+RRAKFV+ELMIE A
Sbjct: 909 PDGVFMTKHPKR------------------QQQSSISEEEQKQEAERRAKFVHELMIEKA 950

Query: 295 PPAIVSLVGRKEYEQCARDLYFFLQVISVFLVVLISFD 332
           P  IVSL+G+KEYEQCA DLYFFLQ  S   +  ++FD
Sbjct: 951 PATIVSLIGQKEYEQCAEDLYFFLQ--SSVCLKQLAFD 986


>AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr2:6927390-6932535 FORWARD
           LENGTH=994
          Length = 994

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 158/367 (43%), Gaps = 61/367 (16%)

Query: 1   MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGL--------------------- 39
           + +  ++E  EVWDFLS  S+ Y F  S S+M+TL+V +                     
Sbjct: 601 LCIANVAEQHEVWDFLSAASKNYSFGKSSSVMKTLAVNVDDAMDDIVRQFKGVSDGLMRK 660

Query: 40  ----------HAKPSEKTKSSSHLSLPGSDPSAFRRENYSLESKEAVVRTRNNVVTDG-L 88
                     HA     + S + +S   S  SA    + S+   E + +   N   +G  
Sbjct: 661 VVGSPLDEHDHAPTRHLSWSVNEISTQLSRESATESMHSSISDTEDIDKLGENTQGEGRF 720

Query: 89  KPKVNS-----------MPLSLPKRSGLESRKSPDNSGSNTDFLARKNAPSPNNLHKTVR 137
             + N            +P  + +R G E   SP  S    DF A+       +      
Sbjct: 721 DSEANGWHSDNELDSKYVPPRVVRRLG-EPESSP--SEKENDFKAKSQVRGSTDFQHA-- 775

Query: 138 GRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPXXXXXXXXXXXXXGGWIRRKAFWAAKQIL 197
             D    + +  H     IP EW+PPN+S P              GW+RR+ FW +KQIL
Sbjct: 776 --DPLTALVQNPH----GIP-EWMPPNVSVPILNLVDKVFQLNRRGWLRRQVFWISKQIL 828

Query: 198 QLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILWPDGIFLTKHXXXXXXXXXXXXXX 257
           QL M DA DD L+ ++  LR    IA G++  + ILWP+G+F T+               
Sbjct: 829 QLVMEDAVDDLLMREICWLRNEDTIAQGIRWAQDILWPNGVFFTRLNDSQEASDETDPSE 888

Query: 258 XXXXXXTQ-----VSSPTMSDEQKQEADRRAKFVYELMIENAPPAIVSLVGRKEYEQCAR 312
                  Q     V+ P+ S EQ+ EA RRA  + + + + AP A+VSLVG  +Y +CAR
Sbjct: 889 KTYQMAGQLGGMKVTKPS-SFEQQLEAFRRASEIKKFLFDGAPTALVSLVGHNQYRRCAR 947

Query: 313 DLYFFLQ 319
           D+++F Q
Sbjct: 948 DIFYFTQ 954