Miyakogusa Predicted Gene

Lj0g3v0292139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292139.1 CUFF.19524.1
         (462 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   128   9e-30
AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   128   1e-29
AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   111   1e-24

>AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:17122171-17124177 FORWARD LENGTH=211
          Length = 211

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 74/110 (67%)

Query: 83  AVIRAQEIQSKLVPDFPSFVKSLVRSHVASCFWMGLPVAFCKRHLPDKDTTITLEDESGK 142
           A+ RA + Q +L   +PSFVKS+++SHV+  FW+GLPV FCK HL   D  ITL DE G+
Sbjct: 92  AISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGE 151

Query: 143 EYKTKYIACKTGLSAGWRQFSAVHKLQEGDVVVFQLVEPTKFKVYIVRAN 192
           EY+T Y+A K GLS GW  F+  H L  GD +VF+LV  T FKVYI R  
Sbjct: 152 EYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVG 201


>AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:6637555-6639035 FORWARD LENGTH=277
          Length = 277

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 78/115 (67%)

Query: 78  EALSTAVIRAQEIQSKLVPDFPSFVKSLVRSHVASCFWMGLPVAFCKRHLPDKDTTITLE 137
           +A   A  RA+++QS L  ++ SF K +++SHV   FW+GLP+ FCK H+P +D  +TL 
Sbjct: 107 DARMYAFDRAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLV 166

Query: 138 DESGKEYKTKYIACKTGLSAGWRQFSAVHKLQEGDVVVFQLVEPTKFKVYIVRAN 192
           DE  +E + KY+A K GLS GWR F+  H+L +GD VVF L+  T FKVYI+R N
Sbjct: 167 DEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVN 221


>AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:23567338-23568670 FORWARD LENGTH=273
          Length = 273

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 76/114 (66%)

Query: 87  AQEIQSKLVPDFPSFVKSLVRSHVASCFWMGLPVAFCKRHLPDKDTTITLEDESGKEYKT 146
           A++ Q  L    P FVKS+VRSHV SCFW+GLP  FC  + P++   I LEDE G+ Y+ 
Sbjct: 113 AEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGEVYEA 172

Query: 147 KYIACKTGLSAGWRQFSAVHKLQEGDVVVFQLVEPTKFKVYIVRANKLRELDGA 200
            YI  + GLS GW++F+  HKL +GD ++F+LVEP KFK+Y+ + N+   L  A
Sbjct: 173 VYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFKIYVFKGNENANLTSA 226