Miyakogusa Predicted Gene

Lj0g3v0291799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291799.1 tr|F2U0N4|F2U0N4_SALS5 Hsp16-like protein
OS=Salpingoeca sp. (strain ATCC 50818) GN=PTSG_01546 PE=3
,51.95,0.000000000000001,CBS,Cystathionine beta-synthase, core;
seg,NULL,NODE_13170_length_636_cov_754.105347.path2.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48530.1 | Symbols: KING1 | SNF1-related protein kinase regul...   173   5e-44
AT1G69800.2 | Symbols:  | Cystathionine beta-synthase (CBS) prot...    78   2e-15
AT1G69800.1 | Symbols:  | Cystathionine beta-synthase (CBS) prot...    78   2e-15

>AT3G48530.1 | Symbols: KING1 | SNF1-related protein kinase
           regulatory subunit gamma 1 | chr3:17987559-17989592
           FORWARD LENGTH=424
          Length = 424

 Score =  173 bits (438), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/104 (79%), Positives = 92/104 (88%)

Query: 11  STEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAV 70
           S EAKLGMRVEDLWD  +PQLSPNEKLNACFESIPVSAFPL   +Q+IEI+SD +LAEAV
Sbjct: 23  SPEAKLGMRVEDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAV 82

Query: 71  KILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQ 114
           + L++  V SAPVVDVDAPEDASWIDRYIGIVEF GIVVW+LHQ
Sbjct: 83  QTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQ 126


>AT1G69800.2 | Symbols:  | Cystathionine beta-synthase (CBS) protein
           | chr1:26274416-26276325 REVERSE LENGTH=476
          Length = 476

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 55/83 (66%)

Query: 32  SPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPED 91
           S  E LN+ F  IPVS+FP  P  + IEI+++  ++EAVKIL+   + SAPV++ D    
Sbjct: 64  SLQETLNSAFAGIPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESS 123

Query: 92  ASWIDRYIGIVEFAGIVVWILHQ 114
             W +RY+GI++++ I++W+L  
Sbjct: 124 LDWRERYLGIIDYSSIILWVLES 146


>AT1G69800.1 | Symbols:  | Cystathionine beta-synthase (CBS) protein
           | chr1:26274416-26276105 REVERSE LENGTH=447
          Length = 447

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 55/83 (66%)

Query: 32  SPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPED 91
           S  E LN+ F  IPVS+FP  P  + IEI+++  ++EAVKIL+   + SAPV++ D    
Sbjct: 35  SLQETLNSAFAGIPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESS 94

Query: 92  ASWIDRYIGIVEFAGIVVWILHQ 114
             W +RY+GI++++ I++W+L  
Sbjct: 95  LDWRERYLGIIDYSSIILWVLES 117