Miyakogusa Predicted Gene

Lj0g3v0291739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291739.1 Non Chatacterized Hit- tr|F0Y1K1|F0Y1K1_AURAN
Putative uncharacterized protein OS=Aureococcus
anopha,27.65,6e-18,seg,NULL; LrgB,LrgB-like protein; PUTATIVE
SEROTONIN TRANSPORTER,NULL,
NODE_6204_length_1763_cov_445.528656.path1.1
         (450 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32080.1 | Symbols:  | membrane protein, putative | chr1:1153...   651   0.0  

>AT1G32080.1 | Symbols:  | membrane protein, putative |
           chr1:11537572-11539756 REVERSE LENGTH=512
          Length = 512

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/452 (73%), Positives = 376/452 (83%), Gaps = 2/452 (0%)

Query: 1   MGSQGNCQ-SRDISTNSA-GSETGSTSSLTQSVFGLSHLIVSLGLIIAMDKFLKQAFVAA 58
           MGS       R +S  +  G+ TG+TS+++++V  +SHL+VSLG+I+A D FLKQAFVAA
Sbjct: 61  MGSSKEMNFERKLSVQAMDGAGTGNTSTISRNVIAISHLLVSLGIILAADYFLKQAFVAA 120

Query: 59  AIKFPSALFGMFCIFSVLIILDSTVPAAAKALMNFFEPALLFIQRWXXXXXXXXXXXXXX 118
           +IKFPSALFGMFCIFSVL+I DS VPAAA  LMNFFEPA LFIQRW              
Sbjct: 121 SIKFPSALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAFLFIQRWLPLFYVPSLVVLPL 180

Query: 119 XXKDIPAASGIKISLIVVGGWLATLCVAGFTAIAVRKAVKTEMTEAEPMGKPSPFSSIEV 178
             +DIPAASG+KI  IV GGWLA+LCVAG+TAIAVRK VKTEMTEAEPM KPSPFS++E+
Sbjct: 181 SVRDIPAASGVKICYIVAGGWLASLCVAGYTAIAVRKMVKTEMTEAEPMAKPSPFSTLEL 240

Query: 179 WAWTGVLLISFVSALFYPTSLGTSARTCLPFLLAATVLGYMVGSGLPSNVKKVFHPIICC 238
           W+W+G+ ++SFV ALFYP SLGTSART LPFLL++TVLGY+VGSGLPS++KKVFHPIICC
Sbjct: 241 WSWSGIFVVSFVGALFYPNSLGTSARTSLPFLLSSTVLGYIVGSGLPSSIKKVFHPIICC 300

Query: 239 ALSADLTAFAFGYFSKSGLDPVLGYYLTNASTNPGAGDILMGFLGSVILSFSFSMFKQRK 298
           ALSA L A AFGY S SGLDPVLG YLT  +++PGAGDILMGFLGSVILSF+FSMFKQRK
Sbjct: 301 ALSAVLAALAFGYASGSGLDPVLGNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRK 360

Query: 299 LVKRHAAEIFTSVIISTVFSLYSTALVGRLVQLEPSLTVSILPRCITVALALSIVSLFDG 358
           LVKRHAAEIFTSVI+STVFSLYSTALVGRLV LEPSLTVSILPRCITVALALSIVSLF+G
Sbjct: 361 LVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 420

Query: 359 ANPSXXXXXXXXXXXXXXNFVQATLDKLRFQDPIARGIATASSAHGLGTAALSAKEPEAL 418
            N S              NFVQ  LDKLR +DPIARGIATASSAHGLGTAALSAKEPEAL
Sbjct: 421 TNSSLTAAVVVVTGLIGANFVQVVLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEAL 480

Query: 419 PFCAIAYALNGIFGSLLCSIPAVRQSLIAIIG 450
           PFCAIAYAL GIFGSLLCS+PAVRQSL+A++G
Sbjct: 481 PFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 512