Miyakogusa Predicted Gene

Lj0g3v0291659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291659.1 Non Chatacterized Hit- tr|K4BX66|K4BX66_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,72.58,1e-18,DUF789,Protein of unknown function DUF789;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.19494.1
         (62 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15030.1 | Symbols:  | Protein of unknown function (DUF789) |...    91   1e-19
AT2G01260.1 | Symbols:  | Protein of unknown function (DUF789) |...    91   2e-19
AT5G49220.1 | Symbols:  | Protein of unknown function (DUF789) |...    69   4e-13
AT4G03420.1 | Symbols:  | Protein of unknown function (DUF789) |...    53   4e-08
AT4G16100.1 | Symbols:  | Protein of unknown function (DUF789) |...    52   8e-08
AT1G73210.1 | Symbols:  | Protein of unknown function (DUF789) |...    52   9e-08
AT1G73210.2 | Symbols:  | Protein of unknown function (DUF789) |...    52   1e-07
AT1G03610.1 | Symbols:  | Protein of unknown function (DUF789) |...    47   2e-06

>AT1G15030.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr1:5177895-5179853 FORWARD LENGTH=360
          Length = 360

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 48/61 (78%)

Query: 2   DGVPKMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFSR 61
           + V KM LPVFGLASYK +GS+WT  GG   QLA SL QAAD+WLRL QVNHPDF+FF R
Sbjct: 300 ESVEKMELPVFGLASYKLRGSVWTSFGGSGHQLANSLFQAADNWLRLRQVNHPDFIFFCR 359

Query: 62  R 62
           R
Sbjct: 360 R 360


>AT2G01260.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr2:135494-137504 REVERSE LENGTH=369
          Length = 369

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 45/57 (78%)

Query: 6   KMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFSRR 62
           KMSLPVFGLASYKF+GSLWTP GG E QL  SL QAAD WL    V+HPDFLFF RR
Sbjct: 313 KMSLPVFGLASYKFRGSLWTPIGGSEHQLVNSLFQAADKWLHSCHVSHPDFLFFCRR 369


>AT5G49220.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr5:19956627-19958453 FORWARD LENGTH=409
          Length = 409

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 39/55 (70%)

Query: 6   KMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFS 60
           K+ LP FGLASYK K S+W  N   E Q   SL+QAAD WL+ LQV+HPD+ FF+
Sbjct: 348 KLPLPTFGLASYKLKVSVWNQNRIQESQKMTSLLQAADKWLKRLQVDHPDYRFFT 402


>AT4G03420.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr4:1512226-1513594 FORWARD LENGTH=310
          Length = 310

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 7   MSLPVFGLASYKFKGSLW--TPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFSR 61
           ++L  FGLA+YK +G++W    + G +++  +SL+  ADSWL+ L+V H DF +FSR
Sbjct: 249 VTLLPFGLATYKMQGNVWLSEDDQGQDQERVLSLLSVADSWLKQLRVQHHDFNYFSR 305


>AT4G16100.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr4:9105809-9107986 FORWARD LENGTH=394
          Length = 394

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 7   MSLPVFGLASYKFKGSLWTPNGGY-ERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           + LP FGLASYKFK S W+P     E Q   +L++ A+ WLR L+V  PDF  F
Sbjct: 332 LPLPTFGLASYKFKLSEWSPESDVDENQRVGTLLRTAEEWLRRLKVILPDFRHF 385


>AT1G73210.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr1:27528428-27530453 REVERSE LENGTH=314
          Length = 314

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 6   KMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           +M LP FG+ +YK +G LW    G+++   + L  AADSWL+ L V+H D+ FF
Sbjct: 257 RMPLPPFGVTTYKMQGDLWG-KTGFDQDRLLYLQSAADSWLKQLNVDHHDYNFF 309


>AT1G73210.2 | Symbols:  | Protein of unknown function (DUF789) |
           chr1:27528428-27530453 REVERSE LENGTH=312
          Length = 312

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 6   KMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           +M LP FG+ +YK +G LW    G+++   + L  AADSWL+ L V+H D+ FF
Sbjct: 255 RMPLPPFGVTTYKMQGDLWG-KTGFDQDRLLYLQSAADSWLKQLNVDHHDYNFF 307


>AT1G03610.1 | Symbols:  | Protein of unknown function (DUF789) |
           chr1:901304-902672 FORWARD LENGTH=308
          Length = 308

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 7   MSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           ++L  FG+A+YK +G +W      +++   SL   ADSWL+ L+V H DF +F
Sbjct: 247 ITLLPFGMATYKMQGDVWLSQDHDDQERLASLYSVADSWLKQLRVQHHDFNYF 299