Miyakogusa Predicted Gene

Lj0g3v0291089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291089.1 Non Chatacterized Hit- tr|E1ZJV9|E1ZJV9_CHLVA
Putative uncharacterized protein OS=Chlorella variabil,20.3,0.0005,no
description,FMN-binding split barrel; FMN-binding split
barrel,FMN-binding split barrel-related; ,CUFF.19459.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04020.1 | Symbols:  | unknown protein; Has 26 Blast hits to ...   280   1e-75

>AT3G04020.1 | Symbols:  | unknown protein; Has 26 Blast hits to 25
           proteins in 10 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
           Eukaryotes - 3 (source: NCBI BLink). |
           chr3:1040548-1042377 FORWARD LENGTH=304
          Length = 304

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/308 (47%), Positives = 207/308 (67%), Gaps = 7/308 (2%)

Query: 1   MKRNKATVLTYAEKCKNILASNWQGSLNTIKADAKGSKESIHTSKVKYIVKRGQPYLWVP 60
           MK +KA +   AEKCK ++ SNWQG LNT+K + K S   IHTSK+KY+++RG+PYLWVP
Sbjct: 2   MKGSKANLSALAEKCKTVIVSNWQGYLNTVKPEDKAS--IIHTSKIKYVMRRGKPYLWVP 59

Query: 61  EDDLHNVNTIIDERGSFAVTSPFPGPLGVLLKSLDKLPARIALSGDIRPLNEDKAKSLAE 120
           E + HNVN + DERGSF++  P+PGPL  L KS+ KLP R+A +G+I P+ E +  ++ +
Sbjct: 60  ESEPHNVNIMFDERGSFSIAHPYPGPLAALFKSIGKLPERVAFTGEIVPVKEKRVDAVKK 119

Query: 121 KLQEVILSEQKAIKEFTYTXXXXXXXX-XXXXXXXDNLQELLRD-DEKYSVYRFKIRSCT 178
            ++E I SE KAI +   +                D+L+ L+ D  EKY +Y+F   SC 
Sbjct: 120 YVEEAIQSEMKAISDTPNSVRSILNSSDQMYASRCDSLRALINDAKEKYVIYKFVPSSCM 179

Query: 179 FLDGRGGNFEVDVENLETTKADKLAPFSAKLIDGINQSEARRRALVLLCFVDMNAHAKDA 238
           F+D  G   E+D++ LE +K D L  +S KL+DGIN++E+RRRAL+L C   ++ +A+DA
Sbjct: 180 FIDPNGTK-EIDLKVLELSKPDPLGTWSTKLVDGINKNESRRRALILFCLYFLDINARDA 238

Query: 239 YVTSIDRKGFDVLAKVMSPVLKDGVGHYQWKEFRFMFKEEAKDVEMFCSQLVEMEEEVIY 298
           Y+ S+DRKGF +L KV  P  ++    YQW+EFRF F+EE KDVE FC QLVEME+EV+ 
Sbjct: 239 YMVSVDRKGFHLLGKV--PSEQEAGDEYQWREFRFEFEEEVKDVEAFCHQLVEMEQEVVS 296

Query: 299 KISTSSGL 306
           K +  +GL
Sbjct: 297 KFTDHTGL 304