Miyakogusa Predicted Gene

Lj0g3v0291009.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291009.1 Non Chatacterized Hit- tr|I1KAS9|I1KAS9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,91.36,0,ATPases
associated with a variety of cellula,AAA+ ATPase domain; ATP-DEPENDENT
CLP PROTEASE ATP-BIND,CUFF.19456.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X ...   530   e-151
AT1G33360.1 | Symbols:  | ATP-dependent Clp protease | chr1:1209...   488   e-138
AT5G49840.1 | Symbols:  | ATP-dependent Clp protease | chr5:2025...   409   e-114

>AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X |
           chr5:21644060-21647503 FORWARD LENGTH=579
          Length = 579

 Score =  530 bits (1365), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/301 (86%), Positives = 276/301 (91%), Gaps = 5/301 (1%)

Query: 2   EGCWGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPA 61
           E CWGGSNLG +FPTPKEICKGL+KFVIGQERAKKVLSVAVYNHYKR++HE+S K     
Sbjct: 146 EDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGE 205

Query: 62  GDSSDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLT 121
            DS+     A    DDD VELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLT
Sbjct: 206 TDST-----AAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLT 260

Query: 122 QAGYVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQH 181
           QAGYVGEDVESILYKLL  ADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 
Sbjct: 261 QAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 320

Query: 182 ALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGF 241
           ALLKMLEGT+VNVPEKGARKHPRGDNIQIDTK+ILFICGGAFVD+EKTIS+RR DSSIGF
Sbjct: 321 ALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGF 380

Query: 242 GAPVRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQ 301
           GAPVRA MR GGVT++A+AS+L+ETVESSDLIAYGLIPEFVGRFP+LVSLSALTENQL+Q
Sbjct: 381 GAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQ 440

Query: 302 V 302
           V
Sbjct: 441 V 441


>AT1G33360.1 | Symbols:  | ATP-dependent Clp protease |
           chr1:12092111-12095789 FORWARD LENGTH=656
          Length = 656

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/298 (81%), Positives = 265/298 (88%), Gaps = 11/298 (3%)

Query: 5   WGGSNLGGNFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPAGDS 64
           WGG+ LG +FPTPKEICK LDKFVIGQ RAKKVLSVAVYNHYKR++H TS+K        
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYH-TSMK-------- 290

Query: 65  SDNGNRAEAIDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 124
              G+ A+ IDDDD VEL+KSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAG
Sbjct: 291 --KGSAAQPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAG 348

Query: 125 YVGEDVESILYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQHALL 184
           YVG+DVESIL+KLL  A++NV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ ALL
Sbjct: 349 YVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 408

Query: 185 KMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGFGAP 244
           K+LEGT+VNVP KGARKHPRGD+IQIDTK+ILFICGGAFVDLEKTI DRRQDSSIGFGAP
Sbjct: 409 KLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAP 468

Query: 245 VRAKMRTGGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQV 302
           VRA M T GVT  AI SSLLE+VES+DL AYGLIPEFVGRFPILVSLSALTE+QLI+V
Sbjct: 469 VRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRV 526


>AT5G49840.1 | Symbols:  | ATP-dependent Clp protease |
           chr5:20255243-20259035 FORWARD LENGTH=608
          Length = 608

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/291 (69%), Positives = 243/291 (83%), Gaps = 7/291 (2%)

Query: 14  FPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRVFHETSLKSKWPAGDSSDNGNRAEA 73
            PTPKEIC+GLD+FVIGQE+AKKVLSVAVYNHYKR++H +  K     G +S++ N    
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKK-----GSASESYNIDME 251

Query: 74  IDDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 133
            D+ D VEL+KSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESI
Sbjct: 252 DDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESI 311

Query: 134 LYKLLLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQHALLKMLEGTVVN 193
           LYKL + A  NV  AQ+GIVYIDEVDK+T K+ S N  RDVSGEGVQ +LLK+LEGTVV+
Sbjct: 312 LYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVS 371

Query: 194 V--PEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISDRRQDSSIGFGAPVRAKMRT 251
           V  PEKG R+ PRGD+IQ+DTK+ILFICGGAF+DLEKT+S+R+ D+SIGFGA VR  M T
Sbjct: 372 VPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMST 431

Query: 252 GGVTDSAIASSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQV 302
            G++ +A+ SSLLE+++S DL+AYGLIPEFVGR PILVSLSAL E+QL+QV
Sbjct: 432 SGLSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQV 482