Miyakogusa Predicted Gene
- Lj0g3v0290919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0290919.1 tr|A9TIP4|A9TIP4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93266
,34.3,3e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BTB,BTB/POZ; no description,BTB/POZ fold; BTB,BTB/P,CUFF.19442.1
(174 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21780.2 | Symbols: | BTB/POZ domain-containing protein | ch... 251 1e-67
AT1G21780.1 | Symbols: | BTB/POZ domain-containing protein | ch... 251 1e-67
AT1G55760.1 | Symbols: | BTB/POZ domain-containing protein | ch... 187 3e-48
AT2G39760.2 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains conta... 58 3e-09
AT2G39760.1 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains conta... 57 4e-09
AT3G56230.1 | Symbols: | BTB/POZ domain-containing protein | ch... 57 6e-09
AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4 ... 55 2e-08
AT2G40450.1 | Symbols: | BTB/POZ domain-containing protein | ch... 54 4e-08
AT1G01640.2 | Symbols: | BTB/POZ domain-containing protein | ch... 54 5e-08
AT1G01640.1 | Symbols: | BTB/POZ domain-containing protein | ch... 54 5e-08
AT4G04090.1 | Symbols: | BTB/POZ domain-containing protein | ch... 50 7e-07
>AT1G21780.2 | Symbols: | BTB/POZ domain-containing protein |
chr1:7652476-7653866 FORWARD LENGTH=326
Length = 326
Score = 251 bits (642), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 148/174 (85%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
ML+E I D+ I TADGTL AHKA+LSASS VF+ ++HH D++ EKE+STIH++DMS++
Sbjct: 154 MLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHH-DLM--EKESSTIHIDDMSRE 210
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC ALLSYLYG I E+FWKHRLALLGAANK++I DLK ACEESL++D+ S NVL RL E
Sbjct: 211 SCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQE 270
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
AWLYQL KLKKGC +LFDFGKIYDVREEI++FF A+RELM+EMFQEVL+VWK
Sbjct: 271 AWLYQLEKLKKGCLMYLFDFGKIYDVREEISSFFRQADRELMLEMFQEVLSVWK 324
>AT1G21780.1 | Symbols: | BTB/POZ domain-containing protein |
chr1:7652476-7653866 FORWARD LENGTH=326
Length = 326
Score = 251 bits (642), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 148/174 (85%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
ML+E I D+ I TADGTL AHKA+LSASS VF+ ++HH D++ EKE+STIH++DMS++
Sbjct: 154 MLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHH-DLM--EKESSTIHIDDMSRE 210
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
SC ALLSYLYG I E+FWKHRLALLGAANK++I DLK ACEESL++D+ S NVL RL E
Sbjct: 211 SCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQE 270
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
AWLYQL KLKKGC +LFDFGKIYDVREEI++FF A+RELM+EMFQEVL+VWK
Sbjct: 271 AWLYQLEKLKKGCLMYLFDFGKIYDVREEISSFFRQADRELMLEMFQEVLSVWK 324
>AT1G55760.1 | Symbols: | BTB/POZ domain-containing protein |
chr1:20847117-20848507 REVERSE LENGTH=329
Length = 329
Score = 187 bits (475), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
ML E I+ D+TI +DG++ AH+AVL+A SPVF ++ H D+ EKE S I++ DM
Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLH-DL--KEKELSEINVLDMPLD 213
Query: 61 SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
+C+A LSY+YG I++EDF HRLALL AA K++I DLK+AC SLLDD+ + NVL RL
Sbjct: 214 ACQAFLSYIYGNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNVLERLQN 273
Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
A+LYQLP+LK C +L FGKI+++R+E N F A+R+L+ E+F EVL+ WK
Sbjct: 274 AYLYQLPELKASCMRYLVKFGKIFEIRDEFNIFMQCADRDLISEIFHEVLSTWK 327
>AT2G39760.2 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains
containing protein | chr2:16583213-16584815 FORWARD
LENGTH=343
Length = 343
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+LD E+ D+ D T +AHK +L+A SPVF + I ++D+
Sbjct: 187 LLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGP---IGNNNVDRIVIDDIEPS 243
Query: 61 SCKALLSYLY-----------GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
KA+LS++Y G+ F LL AA+ +++ LK CE L + L
Sbjct: 244 IFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKL 303
Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL 137
NV + L A +Q +LK C F+
Sbjct: 304 DVDNVATTLALAEQHQFLQLKAFCLEFV 331
>AT2G39760.1 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains
containing protein | chr2:16583213-16585983 FORWARD
LENGTH=408
Length = 408
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+LD E+ D+ D T +AHK +L+A SPVF + I ++D+
Sbjct: 187 LLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGP---IGNNNVDRIVIDDIEPS 243
Query: 61 SCKALLSYLY-----------GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
KA+LS++Y G+ F LL AA+ +++ LK CE L + L
Sbjct: 244 IFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKL 303
Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL 137
NV + L A +Q +LK C F+
Sbjct: 304 DVDNVATTLALAEQHQFLQLKAFCLEFV 331
>AT3G56230.1 | Symbols: | BTB/POZ domain-containing protein |
chr3:20860899-20862135 REVERSE LENGTH=282
Length = 282
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQS 61
E++HAD+ + D + AH+A+L++ S +F+ + D E + I +++++ +
Sbjct: 107 EQLHADILLKPGDDGPPIPAHRALLASKSEIFKNILD-SDGCKTAPEYA-ITLQELNSEQ 164
Query: 62 CKALLSYLY-GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
+ALL +LY GT+ + K+ AL AA+K+ I L++ CE+ +L L +VL+ L+
Sbjct: 165 LQALLEFLYTGTLASDKLEKNVYALFIAADKYMIHYLQELCEQYMLSSLDISSVLNVLDV 224
Query: 121 AWLYQLPKLKKGCFTFL 137
+ L LK+ C F+
Sbjct: 225 SDLGSSKTLKEACVGFV 241
>AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4 |
chr3:937106-939807 REVERSE LENGTH=465
Length = 465
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 1 MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
+L+ E +D+T + RAH+ VL+A SPVFE + DV +E I + DM +
Sbjct: 209 LLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEF--LDVTGEEDR--DIEVTDMEPK 264
Query: 61 SCKALLSYLYGTIKHED-------------FWKHRLA--LLGAANKFEIGDLKDACEESL 105
KALL Y+Y ED LA LLGAA+K+++ L CE L
Sbjct: 265 VFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYKLPRLSLMCESVL 324
Query: 106 LDDLTSGNVLSRLNEAWLYQLPKLKKGCFTF 136
D++ +V + L A Y LK C F
Sbjct: 325 CKDISVDSVANILALADRYNASALKSVCLKF 355
>AT2G40450.1 | Symbols: | BTB/POZ domain-containing protein |
chr2:16892024-16892790 REVERSE LENGTH=209
Length = 209
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 1 MLDEEIHADLTIVTADG----TLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMED 56
+L+E+ AD+ + D ++ AHK VL A S VF+ + + K+ T+ + +
Sbjct: 17 LLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVTLSE 76
Query: 57 MSQQSCKALLSYLY---GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLL 106
M + +A + ++Y G+I KH +L AA+K+EI L+D C L+
Sbjct: 77 MKHEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELI 129
>AT1G01640.2 | Symbols: | BTB/POZ domain-containing protein |
chr1:231164-231915 REVERSE LENGTH=207
Length = 207
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 4 EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETS---TIHMEDMS 58
E++H D+ + + + HKAVL+A S VF + + DE +TS +I + D+S
Sbjct: 20 EQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNM-----LDSDECKTSPEESITLPDLS 74
Query: 59 QQSCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVL 115
K+LL +LY + ++R +L AA+K++I L+D C + L+S NVL
Sbjct: 75 HDELKSLLEFLYSGNLKAPYNQYR-SLYLAADKYDISYLQDVCRNHFIASLSSRNVL 130
>AT1G01640.1 | Symbols: | BTB/POZ domain-containing protein |
chr1:231164-231915 REVERSE LENGTH=207
Length = 207
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 4 EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETS---TIHMEDMS 58
E++H D+ + + + HKAVL+A S VF + + DE +TS +I + D+S
Sbjct: 20 EQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNM-----LDSDECKTSPEESITLPDLS 74
Query: 59 QQSCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVL 115
K+LL +LY + ++R +L AA+K++I L+D C + L+S NVL
Sbjct: 75 HDELKSLLEFLYSGNLKAPYNQYR-SLYLAADKYDISYLQDVCRNHFIASLSSRNVL 130
>AT4G04090.1 | Symbols: | BTB/POZ domain-containing protein |
chr4:1964980-1965650 FORWARD LENGTH=192
Length = 192
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 16 DGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSCKALLSYLY--GTI 73
D + AHK +LSA S VFE ++ D + TI + +M + +A + + Y G++
Sbjct: 35 DAAISAHKRILSARSEVFEEMF-ESDKYKASSKLETITLSEMKHEVLEAFVDFTYSDGSM 93
Query: 74 KHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEAWLYQLP 127
E +H ++L AA +EI L C + L+ L N L L L Q+P
Sbjct: 94 LSEKAKQHAMSLYSAAKDYEIPRLWCLCRKELIASLNMSNALRVLQ---LAQIP 144