Miyakogusa Predicted Gene

Lj0g3v0290919.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290919.1 tr|A9TIP4|A9TIP4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93266
,34.3,3e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BTB,BTB/POZ; no description,BTB/POZ fold; BTB,BTB/P,CUFF.19442.1
         (174 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21780.2 | Symbols:  | BTB/POZ domain-containing protein | ch...   251   1e-67
AT1G21780.1 | Symbols:  | BTB/POZ domain-containing protein | ch...   251   1e-67
AT1G55760.1 | Symbols:  | BTB/POZ domain-containing protein | ch...   187   3e-48
AT2G39760.2 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains conta...    58   3e-09
AT2G39760.1 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains conta...    57   4e-09
AT3G56230.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    57   6e-09
AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4 ...    55   2e-08
AT2G40450.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    54   4e-08
AT1G01640.2 | Symbols:  | BTB/POZ domain-containing protein | ch...    54   5e-08
AT1G01640.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    54   5e-08
AT4G04090.1 | Symbols:  | BTB/POZ domain-containing protein | ch...    50   7e-07

>AT1G21780.2 | Symbols:  | BTB/POZ domain-containing protein |
           chr1:7652476-7653866 FORWARD LENGTH=326
          Length = 326

 Score =  251 bits (642), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 123/174 (70%), Positives = 148/174 (85%), Gaps = 3/174 (1%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           ML+E I  D+ I TADGTL AHKA+LSASS VF+ ++HH D++  EKE+STIH++DMS++
Sbjct: 154 MLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHH-DLM--EKESSTIHIDDMSRE 210

Query: 61  SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
           SC ALLSYLYG I  E+FWKHRLALLGAANK++I DLK ACEESL++D+ S NVL RL E
Sbjct: 211 SCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQE 270

Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
           AWLYQL KLKKGC  +LFDFGKIYDVREEI++FF  A+RELM+EMFQEVL+VWK
Sbjct: 271 AWLYQLEKLKKGCLMYLFDFGKIYDVREEISSFFRQADRELMLEMFQEVLSVWK 324


>AT1G21780.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr1:7652476-7653866 FORWARD LENGTH=326
          Length = 326

 Score =  251 bits (642), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 123/174 (70%), Positives = 148/174 (85%), Gaps = 3/174 (1%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           ML+E I  D+ I TADGTL AHKA+LSASS VF+ ++HH D++  EKE+STIH++DMS++
Sbjct: 154 MLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHH-DLM--EKESSTIHIDDMSRE 210

Query: 61  SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
           SC ALLSYLYG I  E+FWKHRLALLGAANK++I DLK ACEESL++D+ S NVL RL E
Sbjct: 211 SCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQE 270

Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
           AWLYQL KLKKGC  +LFDFGKIYDVREEI++FF  A+RELM+EMFQEVL+VWK
Sbjct: 271 AWLYQLEKLKKGCLMYLFDFGKIYDVREEISSFFRQADRELMLEMFQEVLSVWK 324


>AT1G55760.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr1:20847117-20848507 REVERSE LENGTH=329
          Length = 329

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 126/174 (72%), Gaps = 3/174 (1%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           ML E I+ D+TI  +DG++ AH+AVL+A SPVF  ++ H D+   EKE S I++ DM   
Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLH-DL--KEKELSEINVLDMPLD 213

Query: 61  SCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
           +C+A LSY+YG I++EDF  HRLALL AA K++I DLK+AC  SLLDD+ + NVL RL  
Sbjct: 214 ACQAFLSYIYGNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNVLERLQN 273

Query: 121 AWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQEVLTVWK 174
           A+LYQLP+LK  C  +L  FGKI+++R+E N F   A+R+L+ E+F EVL+ WK
Sbjct: 274 AYLYQLPELKASCMRYLVKFGKIFEIRDEFNIFMQCADRDLISEIFHEVLSTWK 327


>AT2G39760.2 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains
           containing protein | chr2:16583213-16584815 FORWARD
           LENGTH=343
          Length = 343

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           +LD E+  D+     D T +AHK +L+A SPVF   +              I ++D+   
Sbjct: 187 LLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGP---IGNNNVDRIVIDDIEPS 243

Query: 61  SCKALLSYLY-----------GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
             KA+LS++Y           G+     F      LL AA+ +++  LK  CE  L + L
Sbjct: 244 IFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKL 303

Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL 137
              NV + L  A  +Q  +LK  C  F+
Sbjct: 304 DVDNVATTLALAEQHQFLQLKAFCLEFV 331


>AT2G39760.1 | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains
           containing protein | chr2:16583213-16585983 FORWARD
           LENGTH=408
          Length = 408

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           +LD E+  D+     D T +AHK +L+A SPVF   +              I ++D+   
Sbjct: 187 LLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGP---IGNNNVDRIVIDDIEPS 243

Query: 61  SCKALLSYLY-----------GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDL 109
             KA+LS++Y           G+     F      LL AA+ +++  LK  CE  L + L
Sbjct: 244 IFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEKL 303

Query: 110 TSGNVLSRLNEAWLYQLPKLKKGCFTFL 137
              NV + L  A  +Q  +LK  C  F+
Sbjct: 304 DVDNVATTLALAEQHQFLQLKAFCLEFV 331


>AT3G56230.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr3:20860899-20862135 REVERSE LENGTH=282
          Length = 282

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 5/137 (3%)

Query: 4   EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQS 61
           E++HAD+ +   D    + AH+A+L++ S +F+ +    D      E + I +++++ + 
Sbjct: 107 EQLHADILLKPGDDGPPIPAHRALLASKSEIFKNILD-SDGCKTAPEYA-ITLQELNSEQ 164

Query: 62  CKALLSYLY-GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNE 120
            +ALL +LY GT+  +   K+  AL  AA+K+ I  L++ CE+ +L  L   +VL+ L+ 
Sbjct: 165 LQALLEFLYTGTLASDKLEKNVYALFIAADKYMIHYLQELCEQYMLSSLDISSVLNVLDV 224

Query: 121 AWLYQLPKLKKGCFTFL 137
           + L     LK+ C  F+
Sbjct: 225 SDLGSSKTLKEACVGFV 241


>AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4 |
           chr3:937106-939807 REVERSE LENGTH=465
          Length = 465

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 1   MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQ 60
           +L+ E  +D+T   +    RAH+ VL+A SPVFE  +   DV  +E     I + DM  +
Sbjct: 209 LLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEF--LDVTGEEDR--DIEVTDMEPK 264

Query: 61  SCKALLSYLYGTIKHED-------------FWKHRLA--LLGAANKFEIGDLKDACEESL 105
             KALL Y+Y     ED                  LA  LLGAA+K+++  L   CE  L
Sbjct: 265 VFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYKLPRLSLMCESVL 324

Query: 106 LDDLTSGNVLSRLNEAWLYQLPKLKKGCFTF 136
             D++  +V + L  A  Y    LK  C  F
Sbjct: 325 CKDISVDSVANILALADRYNASALKSVCLKF 355


>AT2G40450.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr2:16892024-16892790 REVERSE LENGTH=209
          Length = 209

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 1   MLDEEIHADLTIVTADG----TLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMED 56
           +L+E+  AD+ +   D     ++ AHK VL A S VF+ +    +     K+  T+ + +
Sbjct: 17  LLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVTLSE 76

Query: 57  MSQQSCKALLSYLY---GTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLL 106
           M  +  +A + ++Y   G+I      KH  +L  AA+K+EI  L+D C   L+
Sbjct: 77  MKHEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELI 129


>AT1G01640.2 | Symbols:  | BTB/POZ domain-containing protein |
           chr1:231164-231915 REVERSE LENGTH=207
          Length = 207

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 11/117 (9%)

Query: 4   EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETS---TIHMEDMS 58
           E++H D+ +   +    +  HKAVL+A S VF  +     +  DE +TS   +I + D+S
Sbjct: 20  EQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNM-----LDSDECKTSPEESITLPDLS 74

Query: 59  QQSCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVL 115
               K+LL +LY       + ++R +L  AA+K++I  L+D C    +  L+S NVL
Sbjct: 75  HDELKSLLEFLYSGNLKAPYNQYR-SLYLAADKYDISYLQDVCRNHFIASLSSRNVL 130


>AT1G01640.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr1:231164-231915 REVERSE LENGTH=207
          Length = 207

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 11/117 (9%)

Query: 4   EEIHADLTIVTAD--GTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETS---TIHMEDMS 58
           E++H D+ +   +    +  HKAVL+A S VF  +     +  DE +TS   +I + D+S
Sbjct: 20  EQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNM-----LDSDECKTSPEESITLPDLS 74

Query: 59  QQSCKALLSYLYGTIKHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVL 115
               K+LL +LY       + ++R +L  AA+K++I  L+D C    +  L+S NVL
Sbjct: 75  HDELKSLLEFLYSGNLKAPYNQYR-SLYLAADKYDISYLQDVCRNHFIASLSSRNVL 130


>AT4G04090.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr4:1964980-1965650 FORWARD LENGTH=192
          Length = 192

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 16  DGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSCKALLSYLY--GTI 73
           D  + AHK +LSA S VFE ++   D      +  TI + +M  +  +A + + Y  G++
Sbjct: 35  DAAISAHKRILSARSEVFEEMF-ESDKYKASSKLETITLSEMKHEVLEAFVDFTYSDGSM 93

Query: 74  KHEDFWKHRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEAWLYQLP 127
             E   +H ++L  AA  +EI  L   C + L+  L   N L  L    L Q+P
Sbjct: 94  LSEKAKQHAMSLYSAAKDYEIPRLWCLCRKELIASLNMSNALRVLQ---LAQIP 144