Miyakogusa Predicted Gene

Lj0g3v0289809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0289809.1 tr|A8J7C4|A8J7C4_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_150291 PE=4
SV=1,29.67,0.00002, ,CUFF.19357.1
         (251 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23110.4 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   373   e-104
AT1G23110.5 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   373   e-104
AT1G23110.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   373   e-104
AT1G23110.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   373   e-104
AT1G23110.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   373   e-104
AT1G70900.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   360   e-100

>AT1G23110.4 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G70900.1). | chr1:8196608-8197665
           REVERSE LENGTH=248
          Length = 248

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ +N   +S ALEG+HG+HV  HSPF+  +T Q  D   +T   S  E+NQ L ++R W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKS-SVMESNQRLSIERFW 59

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPI CS    GDQ + ET ANV TS+PFI LGM APRKNL +K+YANSLIGVG
Sbjct: 60  QQRPPCLRPICCSI--RGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 117

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YH+SRGKLRKYLRWVDY MIATTT+CLSRALRNENPK LMAASA+ LP  P MVS
Sbjct: 118 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 177

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKR+LKDPDL+ AH VHKMS+LLGG LF+ADD FP TP+LHA WHLAAA
Sbjct: 178 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 237

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLLE
Sbjct: 238 IGVGTCNKLLE 248


>AT1G23110.5 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G70900.1). | chr1:8196608-8197665
           REVERSE LENGTH=248
          Length = 248

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ +N   +S ALEG+HG+HV  HSPF+  +T Q  D   +T   S  E+NQ L ++R W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKS-SVMESNQRLSIERFW 59

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPI CS    GDQ + ET ANV TS+PFI LGM APRKNL +K+YANSLIGVG
Sbjct: 60  QQRPPCLRPICCSI--RGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 117

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YH+SRGKLRKYLRWVDY MIATTT+CLSRALRNENPK LMAASA+ LP  P MVS
Sbjct: 118 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 177

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKR+LKDPDL+ AH VHKMS+LLGG LF+ADD FP TP+LHA WHLAAA
Sbjct: 178 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 237

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLLE
Sbjct: 238 IGVGTCNKLLE 248


>AT1G23110.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G70900.1); Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr1:8196608-8197665 REVERSE LENGTH=248
          Length = 248

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ +N   +S ALEG+HG+HV  HSPF+  +T Q  D   +T   S  E+NQ L ++R W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKS-SVMESNQRLSIERFW 59

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPI CS    GDQ + ET ANV TS+PFI LGM APRKNL +K+YANSLIGVG
Sbjct: 60  QQRPPCLRPICCSI--RGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 117

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YH+SRGKLRKYLRWVDY MIATTT+CLSRALRNENPK LMAASA+ LP  P MVS
Sbjct: 118 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 177

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKR+LKDPDL+ AH VHKMS+LLGG LF+ADD FP TP+LHA WHLAAA
Sbjct: 178 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 237

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLLE
Sbjct: 238 IGVGTCNKLLE 248


>AT1G23110.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G70900.1); Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr1:8196608-8197665 REVERSE LENGTH=248
          Length = 248

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ +N   +S ALEG+HG+HV  HSPF+  +T Q  D   +T   S  E+NQ L ++R W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKS-SVMESNQRLSIERFW 59

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPI CS    GDQ + ET ANV TS+PFI LGM APRKNL +K+YANSLIGVG
Sbjct: 60  QQRPPCLRPICCSI--RGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 117

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YH+SRGKLRKYLRWVDY MIATTT+CLSRALRNENPK LMAASA+ LP  P MVS
Sbjct: 118 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 177

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKR+LKDPDL+ AH VHKMS+LLGG LF+ADD FP TP+LHA WHLAAA
Sbjct: 178 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 237

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLLE
Sbjct: 238 IGVGTCNKLLE 248


>AT1G23110.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59
           proteins in 15 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:8196608-8197665 REVERSE LENGTH=248
          Length = 248

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/251 (69%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ +N   +S ALEG+HG+HV  HSPF+  +T Q  D   +T   S  E+NQ L ++R W
Sbjct: 1   MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKS-SVMESNQRLSIERFW 59

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPI CS    GDQ + ET ANV TS+PFI LGM APRKNL +K+YANSLIGVG
Sbjct: 60  QQRPPCLRPICCSI--RGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVG 117

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YH+SRGKLRKYLRWVDY MIATTT+CLSRALRNENPK LMAASA+ LP  P MVS
Sbjct: 118 IASSLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVS 177

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKR+LKDPDL+ AH VHKMS+LLGG LF+ADD FP TP+LHA WHLAAA
Sbjct: 178 AVHTGMMEVAFAKRSLKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAA 237

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLLE
Sbjct: 238 IGVGTCNKLLE 248


>AT1G70900.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in
           14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:26732456-26733637 FORWARD
           LENGTH=244
          Length = 244

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/251 (66%), Positives = 196/251 (78%), Gaps = 7/251 (2%)

Query: 1   MNQENTLSNSRALEGVHGIHVVPHSPFTLTETNQSGDLHPSTGGKSASEANQLLFMQRAW 60
           M+ ++    S++LEGVHG+HVV HS F      Q      +  G       Q LF++R W
Sbjct: 1   MSPQSVSKTSKSLEGVHGVHVVSHSHFGFESIGQVSGFESADAG-----TKQRLFIERVW 55

Query: 61  QQRPACLRPIHCSTSCHGDQHLAETVANVLTSIPFIALGMHAPRKNLTSKLYANSLIGVG 120
           QQRP CLRPIHCS   HGDQ + ET ANV+TSIPFI LGM APRKNL  K+YANSLIGVG
Sbjct: 56  QQRPPCLRPIHCSI--HGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVG 113

Query: 121 VASSMYHSSRGKLRKYLRWVDYAMIATTTVCLSRALRNENPKLLMAASAVFLPVNPFMVS 180
           +ASS+YHSSRGK RKYLRW DY MIAT T+CL+RALR ENPK LMAASA+ LP  P +VS
Sbjct: 114 IASSLYHSSRGKFRKYLRWADYTMIATATICLTRALREENPKFLMAASALALPFQPLVVS 173

Query: 181 AIHTGMLEVAFAKRALKDPDLRMAHTVHKMSTLLGGLLFVADDLFPRTPYLHAAWHLAAA 240
           A+HTGM+EVAFAKRAL+DPDL+MAH VHKMS+LLGG LF+ADDLFP TP++HA WHLAAA
Sbjct: 174 AVHTGMMEVAFAKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAA 233

Query: 241 VGVGTCNKLLE 251
           +GVGTCNKLL+
Sbjct: 234 IGVGTCNKLLQ 244