Miyakogusa Predicted Gene
- Lj0g3v0289679.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0289679.2 tr|G7K958|G7K958_MEDTR TNP1 OS=Medicago
truncatula GN=MTR_5g061300 PE=4 SV=1,33.81,0.000000000000003,seg,NULL;
Transposase_24,Transposase, Ptta/En/Spm, plant,CUFF.19353.2
(232 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40087.1 | Symbols: | Plant transposase (Ptta/En/Spm family)... 62 5e-10
AT3G30200.1 | Symbols: | Plant transposase (Ptta/En/Spm family)... 61 8e-10
>AT1G40087.1 | Symbols: | Plant transposase (Ptta/En/Spm family) |
chr1:14999762-15001868 REVERSE LENGTH=390
Length = 390
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 1 MRDRLKNRPMDVPEAHFKKLIAYWKNSTVQRISQINAANRAKKKYMHRTGPVNFARIRAQ 60
+ + L+NRP VPE + L+ +++ + N N+ H G +F+R R +
Sbjct: 160 LNETLQNRPEKVPEDQWSHLVHLIFTDKWRKMQERNTKNQKNHIMPHLCGRKSFSRKRDE 219
Query: 61 LRAKKENDDDVSQAEMFIMTRQSRKGKQVDEETQTAIAILQDSIQNSNESETF------- 113
++ K +AE FI +R+ G V +E + L ++ N N T+
Sbjct: 220 IKIKTGKTP--CRAEFFIESRKKHDGSFVSDEAKLRAEALT-TLLNLNPQVTYNGTASLD 276
Query: 114 ---TSLFGKEKSGRVRCYGRTLTPSMM--------KKNVEISAIKKQHKDEVSGMKRQKD 162
+ +FG E+ GRVRC GR TPS + ++++E S + Q K +V + Q +
Sbjct: 277 DEYSQVFGPERPGRVRCVGRGPTPSRLVRHSNATRRQDIENSELVAQLKTQVKTLGDQVN 336
Query: 163 GLTLLVRNML 172
++ + +L
Sbjct: 337 AMSTFLGQIL 346
>AT3G30200.1 | Symbols: | Plant transposase (Ptta/En/Spm family) |
chr3:11827752-11834262 REVERSE LENGTH=510
Length = 510
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 1 MRDRLKNRPMDVPEAHFKKLIAYWKNSTVQRISQINAANRAKKKYMHRTGPVNFARIRAQ 60
+ + L+NRP VPE + L+ +++ + N N+ H G +F+R R +
Sbjct: 280 LNETLENRPEKVPEDQWSHLVHLRFTDKWRKMQERNTKNQKNHIMPHLCGRKSFSRKRDE 339
Query: 61 LRAKKENDDDVSQAEMFIMTRQSRKGKQVDEETQTAIAILQDSIQNSNESETF------- 113
++ K + E FI +R+ G V +E + AI ++ N N T+
Sbjct: 340 IKIKTGKTP--CRVEFFIESRKKHDGSFVSDEAKLR-AIALTTLLNLNPQVTYNGTASLD 396
Query: 114 ---TSLFGKEKSGRVRCYGRTLTPSMM--------KKNVEISAIKKQHKDEVSGMKRQKD 162
+ +FG E+ GRV C GR TPS + +K++E S + Q K +V + Q +
Sbjct: 397 DEYSQVFGPERPGRVHCVGRGPTPSRLVRHSNATRRKDIENSELVAQLKTQVKTLGDQVN 456
Query: 163 GLTLLVRNML 172
++ + +L
Sbjct: 457 AMSTFLGQIL 466