Miyakogusa Predicted Gene

Lj0g3v0289619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0289619.1 Non Chatacterized Hit- tr|I1ND24|I1ND24_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.04,0,seg,NULL;
PhoX homologous domain, present in p47phox a,Phox homologous domain;
GB DEF: HYPOTHETICAL ,CUFF.19346.1
         (662 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   544   e-155
AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   191   2e-48
AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   154   2e-37
AT1G15240.1 | Symbols:  | Phox-associated domain;Phox-like;Sorti...   100   2e-21

>AT2G15900.1 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr2:6927390-6932535 FORWARD
           LENGTH=994
          Length = 994

 Score =  544 bits (1401), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 312/672 (46%), Positives = 399/672 (59%), Gaps = 51/672 (7%)

Query: 2   LEAATQRRTEVLMPENLENMWXXXXXXXXXXXXXXXDHATDHSLPDRNLAQETSVSKPGT 61
           LE ATQRRTEVL PENLENMW                  +     +  +AQ         
Sbjct: 350 LEVATQRRTEVLRPENLENMWTKGRNYQKKEYKKSLKKGSSTGAKENAVAQ--------- 400

Query: 62  YAVPEGKSSSHPLHTVGSDPLINIGNTTRSESSPDPEKELSFGADHQVDEGNDIKDHTSS 121
             +P               P ++    ++++ + +  K       HQ+ E +  K+  S 
Sbjct: 401 --LP---------------PKVSTDKQSQAQMAEEFSKSSLHDGGHQIYEADVRKESRSD 443

Query: 122 KHTIPLKRSSSSSVLGIQPHNGWS--------IVSEFYTPDLEKRGEG-LRGKSGSDMVV 172
            +   LKRS+S+S L ++P    +        +++EFYT D  K  +  +       +V+
Sbjct: 444 GNKNRLKRSNSTSDLNLRPETSLALLGVSEGPLITEFYTTDFIKHNDNYISDNKSQSIVL 503

Query: 173 RREGLSVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQENTWFVKRRYRNFERLHRHLKD 232
            +EG    KL+CRV+GAYFEK GS SFAVYSIAVTD +  TWFVKRRY NFERLHR LK+
Sbjct: 504 HKEGQHCLKLKCRVLGAYFEKQGSKSFAVYSIAVTDVENKTWFVKRRYSNFERLHRQLKE 563

Query: 233 IPNYSLHLPPKRIFSSSTEDAFVHQRCIQLNKYLQDLLSIANVAEQHEVWDFLXXXXXXX 292
           IPNY+L LPPKRIFSSSTEDAFVH+RCIQL+KYLQDLL IANVAEQHEVWDFL       
Sbjct: 564 IPNYNLQLPPKRIFSSSTEDAFVHRRCIQLDKYLQDLLCIANVAEQHEVWDFLSAASKNY 623

Query: 293 XXXXXXXXMRTLXXXXXXXXXXXXRQFKDVSDGLMRKVVGASPXXXXXXXXXXXXXXXXM 352
                   M+TL            RQFK VSDGLMRKVVG SP                +
Sbjct: 624 SFGKSSSVMKTLAVNVDDAMDDIVRQFKGVSDGLMRKVVG-SP-LDEHDHAPTRHLSWSV 681

Query: 353 DEMDKSILRQNAVESALS--SDNEE----GEKEVNIDREAAEDNEWHSDNELTLKDYSQQ 406
           +E+   + R++A ES  S  SD E+    GE      R  +E N WHSDNEL  K    +
Sbjct: 682 NEISTQLSRESATESMHSSISDTEDIDKLGENTQGEGRFDSEANGWHSDNELDSKYVPPR 741

Query: 407 IINPGNESANLDQDRKHDVMMEAKVGKDVPPTNPTLLPDYLDDPVGVPPEWAPPNVTVPI 466
           ++    E  +   ++++D   +++V       +   L   + +P G+ PEW PPNV+VPI
Sbjct: 742 VVRRLGEPESSPSEKENDFKAKSQVRGSTDFQHADPLTALVQNPHGI-PEWMPPNVSVPI 800

Query: 467 LNLVDNIFQLKKRGWLRRQVFWISKQILQVVMEDAIDDLLLSEIHWLRREDTIAQGIRGV 526
           LNLVD +FQL +RGWLRRQVFWISKQILQ+VMEDA+DDLL+ EI WLR EDTIAQGIR  
Sbjct: 801 LNLVDKVFQLNRRGWLRRQVFWISKQILQLVMEDAVDDLLMREICWLRNEDTIAQGIRWA 860

Query: 527 QDILWPGGKFFLRVQTPQLFIGGNVIDQNPLQTIESCGSKIGK---SQSGSFEQQLEAAR 583
           QDILWP G FF R+   Q        + +P +       ++G    ++  SFEQQLEA R
Sbjct: 861 QDILWPNGVFFTRLNDSQ----EASDETDPSEKTYQMAGQLGGMKVTKPSSFEQQLEAFR 916

Query: 584 RASDLKKLLFDGAPAALVSLIGQKQYRRCASDIYYFSQSSICVKQLAYAILELLLISVFP 643
           RAS++KK LFDGAP ALVSL+G  QYRRCA DI+YF+QS+IC+KQL +AILELLL SVFP
Sbjct: 917 RASEIKKFLFDGAPTALVSLVGHNQYRRCARDIFYFTQSNICIKQLTFAILELLLRSVFP 976

Query: 644 ELRNVVMSVHEN 655
           EL++++  + EN
Sbjct: 977 ELQDLLRDIREN 988


>AT1G15240.2 | Symbols:  | Phox-associated domain;Phox-like;Sorting
            nexin, C-terminal | chr1:5243799-5248604 FORWARD
            LENGTH=1020
          Length = 1020

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 135/208 (64%), Gaps = 23/208 (11%)

Query: 451  VGVPPEWAPPNVTVPILNLVDNIFQLKKRGWLRRQVFWISKQILQVVMEDAIDDLLLSEI 510
             G+P EW PP +T+P+L+LVD +FQL++ GW+RR+ FW++KQILQ+ M DA+DD +L +I
Sbjct: 828  AGLPTEWVPPKLTLPLLDLVDVVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKI 887

Query: 511  HWLRREDTIAQGIRGVQDILWPGGKFFLRVQTPQLFIGGNVIDQNPLQTIESCGSKIGKS 570
              LRR   +A GI+ V+ ILWP G F               + ++P +  +S  S+    
Sbjct: 888  CLLRRGTVVASGIQRVEQILWPDGVF---------------MTKHPKRQQQSSISE---- 928

Query: 571  QSGSFEQQLEAARRASDLKKLLFDGAPAALVSLIGQKQYRRCASDIYYFSQSSICVKQLA 630
                 EQ+ EA RRA  + +L+ + APA +VSLIGQK+Y +CA D+Y+F QSS+C+KQLA
Sbjct: 929  ----EEQKQEAERRAKFVHELMIEKAPATIVSLIGQKEYEQCAEDLYFFLQSSVCLKQLA 984

Query: 631  YAILELLLISVFPELRNVVMSVHENMHV 658
            + ILELLL+S FPE+      +H   H+
Sbjct: 985  FDILELLLLSAFPEMEQAFKKLHYEKHL 1012



 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query: 178 SVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQENTWFVKRRYRNFERLHRHLKDIPNYS 237
           S  KLRC V+GA   K  S  FAVYS+AVTD   ++W +KRR+R+FE LHR LK  P Y 
Sbjct: 609 SFAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYK 668

Query: 238 LHLPPKRIFSSSTEDAFVHQRCIQLNKYLQDLLSIANVAEQHEVWDFL 285
           LHLPPK   S+  +   + +RC+ L++Y++ LL +  ++   EVWDFL
Sbjct: 669 LHLPPKHFLSTGVDIPVIQERCVLLDEYIKKLLQLQRISGSIEVWDFL 716


>AT1G15240.3 | Symbols:  | Phox-associated domain;Phox-like;Sorting
            nexin, C-terminal | chr1:5243799-5248498 FORWARD
            LENGTH=1012
          Length = 1012

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 31/199 (15%)

Query: 452  GVPPEWAPPNVTVPILNLVDNIFQLKKRGWLRRQVFWISKQILQVVMEDAIDDLLLSEIH 511
            G+P EW PP +T+P+L+LVD +FQL++ GW+RR+ FW++KQILQ+ M DA+DD +L +I 
Sbjct: 829  GLPTEWVPPKLTLPLLDLVDVVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIC 888

Query: 512  WLRREDTIAQGIRGVQDILWPGGKFFLRVQTPQLFIGGNVIDQNPLQTIESCGSKIGKSQ 571
             LRR   +A GI+ V+ ILWP G F               + ++P +  +S  S+     
Sbjct: 889  LLRRGTVVASGIQRVEQILWPDGVF---------------MTKHPKRQQQSSISE----- 928

Query: 572  SGSFEQQLEAARRASDLKKLLFDGAPAALVSLIGQKQYRRCASDIYYFSQSSI------- 624
                EQ+ EA RRA  + +L+ + APA +VSLIGQK+Y +CA D+Y+F Q +I       
Sbjct: 929  ---EEQKQEAERRAKFVHELMIEKAPATIVSLIGQKEYEQCAEDLYFFLQVNIPLDFRFV 985

Query: 625  -CVKQLAYAILELLLISVF 642
             C+      I++++L+SV 
Sbjct: 986  RCLHAFDDFIVKIILVSVI 1004



 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 71/108 (65%)

Query: 178 SVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQENTWFVKRRYRNFERLHRHLKDIPNYS 237
           S  KLRC V+GA   K  S  FAVYS+AVTD   ++W +KRR+R+FE LHR LK  P Y 
Sbjct: 609 SFAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYK 668

Query: 238 LHLPPKRIFSSSTEDAFVHQRCIQLNKYLQDLLSIANVAEQHEVWDFL 285
           LHLPPK   S+  +   + +RC+ L++Y++ LL +  ++   EVWDFL
Sbjct: 669 LHLPPKHFLSTGVDIPVIQERCVLLDEYIKKLLQLQRISGSIEVWDFL 716


>AT1G15240.1 | Symbols:  | Phox-associated domain;Phox-like;Sorting
           nexin, C-terminal | chr1:5243799-5246495 FORWARD
           LENGTH=706
          Length = 706

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 60/90 (66%)

Query: 178 SVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQENTWFVKRRYRNFERLHRHLKDIPNYS 237
           S  KLRC V+GA   K  S  FAVYS+AVTD   ++W +KRR+R+FE LHR LK  P Y 
Sbjct: 609 SFAKLRCEVLGANIVKGSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRLKVFPEYK 668

Query: 238 LHLPPKRIFSSSTEDAFVHQRCIQLNKYLQ 267
           LHLPPK   S+  +   + +RC+ L++Y++
Sbjct: 669 LHLPPKHFLSTGVDIPVIQERCVLLDEYIK 698