Miyakogusa Predicted Gene
- Lj0g3v0288979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0288979.1 Non Chatacterized Hit- tr|I1K3I1|I1K3I1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,96.15,0,FAMILY NOT
NAMED,NULL,CUFF.19328.1
(105 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 192 4e-50
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 187 1e-48
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 177 9e-46
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 177 9e-46
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 149 3e-37
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 144 1e-35
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 144 1e-35
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 144 2e-35
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 135 7e-33
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 102 5e-23
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 100 1e-22
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 100 2e-22
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 100 2e-22
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 100 2e-22
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 100 2e-22
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 95 8e-21
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 92 7e-20
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 92 7e-20
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 92 7e-20
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 92 7e-20
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 86 4e-18
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 85 1e-17
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 84 2e-17
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 84 2e-17
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 78 9e-16
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 77 2e-15
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 77 2e-15
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 74 2e-14
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 74 2e-14
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 74 3e-14
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 73 3e-14
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 73 4e-14
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 72 9e-14
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 71 1e-13
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 70 3e-13
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 68 1e-12
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 57 2e-09
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 192 bits (487), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/103 (88%), Positives = 95/103 (92%)
Query: 1 MKLSSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60
M+LSSAGF+ P EGEKRVL+SELWHACAGPLVSLP VGSRVVYFPQGHSEQVA STN+E
Sbjct: 1 MRLSSAGFNPQPHEGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE 60
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
VDAHIPNYPSL PQLICQLHNVTMHAD ETDEVY QMTLQPLN
Sbjct: 61 VDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLN 103
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 187 bits (475), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/105 (86%), Positives = 95/105 (90%), Gaps = 2/105 (1%)
Query: 1 MKLSSAGFSSPPQE--GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTN 58
M+LSSAGF+ P E GEKRVL+SELWHACAGPLVSLP VGSRVVYFPQGHSEQVA STN
Sbjct: 1 MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60
Query: 59 REVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
+EVDAHIPNYPSL PQLICQLHNVTMHAD ETDEVY QMTLQPLN
Sbjct: 61 KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLN 105
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 177 bits (450), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MKLSSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60
MKLS++G EGEK L+SELWHACAGPLVSLP+ GSRVVYFPQGHSEQVA +TN+E
Sbjct: 1 MKLSTSGLGQQGHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLNP 104
VD HIPNYPSLPPQLICQLHNVTMHAD ETDEVY QMTLQPL P
Sbjct: 60 VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTP 103
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 177 bits (450), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 1 MKLSSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60
MKLS++G EGEK L+SELWHACAGPLVSLP+ GSRVVYFPQGHSEQVA +TN+E
Sbjct: 1 MKLSTSGLGQQGHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLNP 104
VD HIPNYPSLPPQLICQLHNVTMHAD ETDEVY QMTLQPL P
Sbjct: 60 VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTP 103
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 149 bits (376), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Query: 1 MKLSSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60
MK S GF EGEK+ ++S+LWHACAGPLVSLP VGS VVYFPQGHSEQVA S ++
Sbjct: 1 MKAPSNGFLPSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
D IPNYP+LP +LIC LH+VT+HADTETDEVY QMTLQP+N
Sbjct: 61 TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVN 102
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 144 bits (362), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query: 4 SSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDA 63
SS G S P EGE+R ++SELWHACAGPL+SLP GS VVYFPQGHSEQVA S ++ D
Sbjct: 5 SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63
Query: 64 HIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
IP+YP+LP +LIC LHNVT++AD ETDEVY QMTLQP+N
Sbjct: 64 FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN 103
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 144 bits (362), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query: 4 SSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDA 63
SS G S P EGE+R ++SELWHACAGPL+SLP GS VVYFPQGHSEQVA S ++ D
Sbjct: 5 SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63
Query: 64 HIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
IP+YP+LP +LIC LHNVT++AD ETDEVY QMTLQP+N
Sbjct: 64 FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN 103
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 144 bits (362), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query: 4 SSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDA 63
SS G S P EGE+R ++SELWHACAGPL+SLP GS VVYFPQGHSEQVA S ++ D
Sbjct: 5 SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63
Query: 64 HIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQPLN 103
IP+YP+LP +LIC LHNVT++AD ETDEVY QMTLQP+N
Sbjct: 64 FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN 103
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 135 bits (339), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 13 QEGEKR-VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSL 71
Q G ++ V++SELWHACAGPLV LP VGS V YF QGHSEQVAVST R +PNYP+L
Sbjct: 43 QSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNL 102
Query: 72 PPQLICQLHNVTMHADTETDEVYVQMTLQPL 102
P QL+CQ+HNVT+HAD ++DE+Y QM+LQP+
Sbjct: 103 PSQLMCQVHNVTLHADKDSDEIYAQMSLQPV 133
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 102 bits (254), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 5/102 (4%)
Query: 1 MKLSSAGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60
+KL + G++ + E L +ELW ACAGPLV +P G RV YFPQGH EQ+ STN+
Sbjct: 23 LKLIAVGWNLGSNDDE---LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQG 79
Query: 61 -VDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQP 101
VD IP + +LPP+++C++ +VT+ A+ ETDEVY Q+TLQP
Sbjct: 80 VVDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQP 120
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 100 bits (250), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE-VDAHIPNYPSLPPQLICQ 78
L +ELW ACAGPLV +P G RV YFPQGH EQ+ STN+ VD IP + +LPP+++C+
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ +VT+ A+ ETDEVY Q+TLQP
Sbjct: 77 VLSVTLKAEHETDEVYAQITLQP 99
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 25/123 (20%)
Query: 3 LSSAGFSSPPQ--------EGEK----------RVLD------SELWHACAGPLVSLPAV 38
SS+GFS P + EG+K R LD ELWHACAGPLV++P
Sbjct: 17 FSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQ 76
Query: 39 GSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMT 98
RV YFPQGH EQV STN+ + +P Y LP +L+C++ NV + A+ +TDEVY Q+T
Sbjct: 77 DDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQIT 135
Query: 99 LQP 101
L P
Sbjct: 136 LLP 138
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 25/123 (20%)
Query: 3 LSSAGFSSPPQ--------EGEK----------RVLD------SELWHACAGPLVSLPAV 38
SS+GFS P + EG+K R LD ELWHACAGPLV++P
Sbjct: 17 FSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQ 76
Query: 39 GSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMT 98
RV YFPQGH EQV STN+ + +P Y LP +L+C++ NV + A+ +TDEVY Q+T
Sbjct: 77 DDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQIT 135
Query: 99 LQP 101
L P
Sbjct: 136 LLP 138
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 25/123 (20%)
Query: 3 LSSAGFSSPPQ--------EGEK----------RVLD------SELWHACAGPLVSLPAV 38
SS+GFS P + EG+K R LD ELWHACAGPLV++P
Sbjct: 17 FSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQ 76
Query: 39 GSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMT 98
RV YFPQGH EQV STN+ + +P Y LP +L+C++ NV + A+ +TDEVY Q+T
Sbjct: 77 DDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQIT 135
Query: 99 LQP 101
L P
Sbjct: 136 LLP 138
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 25/123 (20%)
Query: 3 LSSAGFSSPPQ--------EGEK----------RVLD------SELWHACAGPLVSLPAV 38
SS+GFS P + EG+K R LD ELWHACAGPLV++P
Sbjct: 17 FSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQ 76
Query: 39 GSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYVQMT 98
RV YFPQGH EQV STN+ + +P Y LP +L+C++ NV + A+ +TDEVY Q+T
Sbjct: 77 DDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQIT 135
Query: 99 LQP 101
L P
Sbjct: 136 LLP 138
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 95.1 bits (235), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 8 FSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDA-HIP 66
F S + L +ELW CAGPLV +P RV YFPQGH EQ+ STN+ +++ IP
Sbjct: 10 FGSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIP 69
Query: 67 NYPSLPPQLICQLHNVTMHADTETDEVYVQMTLQP 101
+ LPP+++C++ +VT+ A+ ETDEVY Q+TLQP
Sbjct: 70 VF-DLPPKILCRVLDVTLKAEHETDEVYAQITLQP 103
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 19 VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQ 78
L ELWHACAGPLV+LP G RV YFP+GH EQ+ S ++ ++ +P++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ N+ A+ ETDEVY Q+TL P
Sbjct: 77 VINIQRRAEPETDEVYAQITLLP 99
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 19 VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQ 78
L ELWHACAGPLV+LP G RV YFP+GH EQ+ S ++ ++ +P++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ N+ A+ ETDEVY Q+TL P
Sbjct: 77 VINIQRRAEPETDEVYAQITLLP 99
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 19 VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQ 78
L ELWHACAGPLV+LP G RV YFP+GH EQ+ S ++ ++ +P++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ N+ A+ ETDEVY Q+TL P
Sbjct: 77 VINIQRRAEPETDEVYAQITLLP 99
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 19 VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQ 78
L ELWHACAGPLV+LP G RV YFP+GH EQ+ S ++ ++ +P++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ N+ A+ ETDEVY Q+TL P
Sbjct: 77 VINIQRRAEPETDEVYAQITLLP 99
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 22 SELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLICQLHN 81
SELWHACAGPL LP G+ VVYFPQGH EQ A+ + IP + L PQ++C++ N
Sbjct: 64 SELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAM-VSYSSPLEIPKF-DLNPQIVCRVVN 121
Query: 82 VTMHADTETDEVYVQMTLQPL 102
V + A+ +TDEVY Q+TL PL
Sbjct: 122 VQLLANKDTDEVYTQVTLLPL 142
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 16/83 (19%)
Query: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPS----LPPQLICQ 78
ELWHACAGPL+SLP GS V+YFPQGH EQ P++ + LPP + C+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA------------PDFSAAIYGLPPHVFCR 101
Query: 79 LHNVTMHADTETDEVYVQMTLQP 101
+ +V +HA+T TDEVY Q++L P
Sbjct: 102 ILDVKLHAETTTDEVYAQVSLLP 124
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNR-EVDAHIPNYPSLPPQLICQ 78
L ELW CAGPLV +P RV YFPQGH EQ+ ST + +++ P + LPP+++C
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 67
Query: 79 LHNVTMHADTETDEVYVQMTLQPL 102
+ NV++ A+ +TDEVY Q+TL P+
Sbjct: 68 VMNVSLQAEKDTDEVYAQITLIPV 91
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNR-EVDAHIPNYPSLPPQLICQ 78
L ELW CAGPLV +P RV YFPQGH EQ+ ST + +++ P + LPP+++C
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 67
Query: 79 LHNVTMHADTETDEVYVQMTLQPL 102
+ NV++ A+ +TDEVY Q+TL P+
Sbjct: 68 VMNVSLQAEKDTDEVYAQITLIPV 91
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 78.2 bits (191), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Query: 16 EKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIP---NYPSLP 72
+++ LD +LWHACAG +V +P++ S V YF QGH+E AH P + P +P
Sbjct: 3 QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEH----------AHAPPDFHAPRVP 52
Query: 73 PQLICQLHNVTMHADTETDEVYVQMTLQPL 102
P ++C++ +V AD ETDEV+ ++TL PL
Sbjct: 53 PLILCRVVSVKFLADAETDEVFAKITLLPL 82
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V ST E++ PN LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE YV++TL P
Sbjct: 77 KLQCRVIAIHLKVENNSDETYVEITLMP 104
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 10 SPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYP 69
+P + G ++ LD +LWHACAG +V +P + S+V YFPQGH+E + N P
Sbjct: 6 NPMKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP 59
Query: 70 SLPPQLICQLHNVTMHADTETDEVYVQMTLQPL 102
+PP ++C++ + AD E+DEV+ ++ L PL
Sbjct: 60 -IPPMVLCRVLAIKYMADAESDEVFAKLRLIPL 91
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 17 KRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLI 76
K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77
Query: 77 CQLHNVTMHADTETDEVYVQMTLQP 101
C++ + D TDEVY Q++L P
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP 102
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 17 KRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLI 76
K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77
Query: 77 CQLHNVTMHADTETDEVYVQMTLQP 101
C++ + D TDEVY Q++L P
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP 102
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 73.6 bits (179), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 17 KRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLI 76
K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77
Query: 77 CQLHNVTMHADTETDEVYVQMTLQP 101
C++ + D TDEVY Q++L P
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP 102
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V ST E++ P LP
Sbjct: 18 DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE Y ++TL P
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMP 104
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V ST E++ P P
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE Y ++TL P
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMP 104
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G ++ YFPQG+ E V ST E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE Y ++TL P
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMP 104
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G V YFPQG+ E V ST E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE+Y ++TL P
Sbjct: 77 KLQCRVIAIHLKVENNSDEIYAEITLMP 104
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 14 EGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G V YFPQG+ E V ST E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADTETDEVYVQMTLQP 101
+L C++ + + + +DE Y ++TL P
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMP 104
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 17 KRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLI 76
K + +LW CAGPL +P +G +V YFPQG+ E V ST E++ P LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79
Query: 77 CQLHNVTMHADTETDEVYVQMTLQP 101
C++ + + + +DE Y ++TL P
Sbjct: 80 CRVIAIHLKVENNSDETYAKITLMP 104
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 18 RVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAHIPNYPSLPPQLIC 77
R +D +W ACAG V +P + SRV YFPQGH E + PS + C
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCC--------PLLSTLPSSTSPVPC 65
Query: 78 QLHNVTMHADTETDEVYVQMTLQPL 102
+ ++ + AD TDEV+ + LQP+
Sbjct: 66 IITSIQLLADPVTDEVFAHLILQPM 90