Miyakogusa Predicted Gene
- Lj0g3v0288719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0288719.1 Non Chatacterized Hit- tr|J3MXH8|J3MXH8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,37.61,0.00000000000006,seg,NULL; OS11G0103400 PROTEIN,NULL;
ARIADNE RING ZINC FINGER,NULL; no description,Zinc finger,
RING,CUFF.19309.1
(493 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53690.1 | Symbols: | RING/U-box superfamily protein | chr3:... 270 1e-72
AT3G14250.1 | Symbols: | RING/U-box superfamily protein | chr3:... 218 9e-57
AT4G19670.2 | Symbols: | RING/U-box superfamily protein | chr4:... 143 2e-34
AT4G19670.1 | Symbols: | RING/U-box superfamily protein | chr4:... 143 2e-34
AT5G37560.1 | Symbols: | RING/U-box superfamily protein | chr5:... 138 1e-32
AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 137 1e-32
AT3G45470.1 | Symbols: | IBR domain containing protein | chr3:1... 127 2e-29
AT2G25360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 124 1e-28
AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 122 4e-28
AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 119 5e-27
AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 119 6e-27
AT2G21420.1 | Symbols: | IBR domain containing protein | chr2:9... 116 3e-26
AT2G25370.2 | Symbols: | RING/U-box superfamily protein | chr2:... 112 8e-25
AT2G25370.1 | Symbols: | RING/U-box superfamily protein | chr2:... 111 1e-24
AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 111 1e-24
AT3G45555.1 | Symbols: | RING/U-box protein | chr3:16712368-167... 103 3e-22
AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 102 8e-22
AT2G19610.2 | Symbols: | RING/U-box superfamily protein | chr2:... 95 1e-19
AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 95 1e-19
AT3G45460.1 | Symbols: | IBR domain containing protein | chr3:1... 92 9e-19
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 80 3e-15
AT2G19610.1 | Symbols: | RING/U-box superfamily protein | chr2:... 78 1e-14
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 78 2e-14
AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-1... 74 2e-13
AT5G07640.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 8e-13
AT3G45510.1 | Symbols: | RING/U-box protein | chr3:16690790-166... 69 5e-12
AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 69 6e-12
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pro... 68 2e-11
AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily p... 63 5e-10
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily p... 62 1e-09
AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily pro... 57 3e-08
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | c... 54 2e-07
AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily pro... 54 2e-07
AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing prot... 53 4e-07
AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing prot... 50 4e-06
>AT3G53690.1 | Symbols: | RING/U-box superfamily protein |
chr3:19898997-19900044 REVERSE LENGTH=320
Length = 320
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 169/233 (72%), Gaps = 2/233 (0%)
Query: 260 IRCRCGYAECSDTAGEGESSNAAPFICEICTETKTAWESFGITGCSHAYCSDCVAMYVRS 319
IR C G+ SS A F CEIC ++K+ ESF I GCSH YC+DCV+ Y+ +
Sbjct: 89 IRILCFAPPIHREKGQSSSSKTATFDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAA 148
Query: 320 KVEENVINIKCPVSGCSGLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCS 379
K+++N+++I+CPVSGCSG LE + CR ILP+EVFDRWG A EA++ S+KFYCP+ +CS
Sbjct: 149 KLQDNILSIECPVSGCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCS 208
Query: 380 ALL-IDDGRVKVSQSECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLA 438
AL+ +++ VK+ SECP C R+ C +C WH +TC E+QKL ++RG++D++L +A
Sbjct: 209 ALVFLEESEVKMKDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMA 268
Query: 439 KDKKWRRCPNCKLYVAKSEGCMYMRCRCGHTFCYNCGTPNLNKKSHYCDTCRR 491
K KKW+RCP+CK Y+ KS+GC+YM+CRCG FCYNCGTP+ + +HYC C+R
Sbjct: 269 KQKKWKRCPSCKFYIEKSQGCLYMKCRCGLAFCYNCGTPSRD-HTHYCYNCKR 320
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 10/199 (5%)
Query: 78 SSNDAPPFICEICTETKTAWEXXXXXXXXXXXXXXXSECVFTYVSSKLQQNQINITCPIP 137
SS+ F CEIC ++K+ E ++CV Y+++KLQ N ++I CP+
Sbjct: 106 SSSKTATFDCEICVDSKSIIESFRIGGCSHFYC---NDCVSKYIAAKLQDNILSIECPVS 162
Query: 138 ECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKFYCPFVDCSAML-IDDGVEKVTE 196
C+G LE + CR ILP EV DRW ALCEA++ S+KFYCP+ DCSA++ +++ K+ +
Sbjct: 163 GCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKD 222
Query: 197 SECPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKG----LVVKLAKE--MKKCPNCRFY 250
SECP+C R+ C +C WH E+TCEEFQK+ E+G L+ +AK+ K+CP+C+FY
Sbjct: 223 SECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWKRCPSCKFY 282
Query: 251 IAKSDDCEVIRCRCGYAEC 269
I KS C ++CRCG A C
Sbjct: 283 IEKSQGCLYMKCRCGLAFC 301
>AT3G14250.1 | Symbols: | RING/U-box superfamily protein |
chr3:4745963-4746958 REVERSE LENGTH=303
Length = 303
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 8/222 (3%)
Query: 271 DTAGEGESSNAAPFICEICTETKTAWESF-GITGCSHAYCSDCVAMYVRSKVEENVINIK 329
+ E E + +C IC + K + + F G T C+HAYC+DC YV +K++EN IK
Sbjct: 80 EIKAENEPMEPSRRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIK 139
Query: 330 CPVSGCSGLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLID--DGR 387
CP C+ L+E CR ++P++VFDRW K E++I+ +KFYCPF +CSA++++ +G
Sbjct: 140 CPDVECTRLIEPYTCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGD 199
Query: 388 VKVSQSECPDCRRLFCAQCKVPWHAGVTCVEYQKLG---KDDRGKEDLMLIKLAKDKKWR 444
V+Q+EC C RLFC QCKV WHAG+ C E+Q+ G K ++D +LI++AK+K+WR
Sbjct: 200 ANVTQTECRSCHRLFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWR 259
Query: 445 RCPNCKLYVAKSEGCMYMRCRCGHTFCYNCGTPNLNKKSHYC 486
RCP+CK YV K EGC +++CRCG+ FCY CG+ + SH C
Sbjct: 260 RCPSCKFYVDKVEGCQHIKCRCGYQFCYGCGS--VWSSSHAC 299
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 118/179 (65%), Gaps = 11/179 (6%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
++C YV++K+++N I CP ECT L+E CR ++P +V DRW LCE++I++ +
Sbjct: 120 TDCTVRYVATKIKENASRIKCPDVECTRLIEPYTCRDLIPKDVFDRWEKILCESLISSWD 179
Query: 174 KFYCPFVDCSAMLID--DGVEKVTESECPNCRRLFCAQCKVPWHNEVTCEEFQ------- 224
KFYCPF DCSAM+++ +G VT++EC +C RLFC QCKV WH + C+EFQ
Sbjct: 180 KFYCPFKDCSAMMVNNENGDANVTQTECRSCHRLFCVQCKVTWHAGIGCDEFQRFGNTKK 239
Query: 225 KMNQEEKGLVVKLA--KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSDTAGEGESSNA 281
K + E+ L++++A K+ ++CP+C+FY+ K + C+ I+CRCGY C SS+A
Sbjct: 240 KSSDEDDALLIQMAKNKQWRRCPSCKFYVDKVEGCQHIKCRCGYQFCYGCGSVWSSSHA 298
>AT4G19670.2 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 21/207 (10%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C IC E + + E C+H +CS C+ YV KV+ + + I+CP C L A +C+
Sbjct: 207 CSICCEDRQS-EMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 265
Query: 346 AILPEEVFDRWGKAASEAMI--AESEKFYCPFANCSALLIDDGRVKVSQS---------- 393
+ LP F K+ EA + + K YCP+ NCS LL + ++
Sbjct: 266 SFLPVTTF----KSFEEANVCSKNNGKIYCPYPNCSFLLDPQECLSSGRASSSSSTQSEN 321
Query: 394 ----ECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNC 449
ECP C R C C VPWHA ++C E+Q L D+R +D+ L +LA+ K+WRRC C
Sbjct: 322 SCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQC 381
Query: 450 KLYVAKSEGCMYMRCRCGHTFCYNCGT 476
++ + ++GC +M CRCGH FCY+CG
Sbjct: 382 RIMIELAQGCNHMTCRCGHEFCYSCGA 408
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
S C+ TYV K++ +++ I CP +C L A +C++ LP + A +
Sbjct: 230 SHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECKSFLPVTTFKSFEEA--NVCSKNNG 287
Query: 174 KFYCPFVDCSAMLIDDGVEKVTES----------------ECPNCRRLFCAQCKVPWHNE 217
K YCP+ +CS +L D E ++ ECP C R C C VPWH
Sbjct: 288 KIYCPYPNCSFLL--DPQECLSSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHAS 345
Query: 218 VTCEEFQKMNQEEKG----LVVKLA--KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSD 271
++CEEFQ + +E+ + +LA K ++C CR I + C + CRCG+ C
Sbjct: 346 MSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQCRIMIELAQGCNHMTCRCGHEFCYS 405
Query: 272 TAGE 275
E
Sbjct: 406 CGAE 409
>AT4G19670.1 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 21/207 (10%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C IC E + + E C+H +CS C+ YV KV+ + + I+CP C L A +C+
Sbjct: 207 CSICCEDRQS-EMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 265
Query: 346 AILPEEVFDRWGKAASEAMI--AESEKFYCPFANCSALLIDDGRVKVSQS---------- 393
+ LP F K+ EA + + K YCP+ NCS LL + ++
Sbjct: 266 SFLPVTTF----KSFEEANVCSKNNGKIYCPYPNCSFLLDPQECLSSGRASSSSSTQSEN 321
Query: 394 ----ECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNC 449
ECP C R C C VPWHA ++C E+Q L D+R +D+ L +LA+ K+WRRC C
Sbjct: 322 SCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQC 381
Query: 450 KLYVAKSEGCMYMRCRCGHTFCYNCGT 476
++ + ++GC +M CRCGH FCY+CG
Sbjct: 382 RIMIELAQGCNHMTCRCGHEFCYSCGA 408
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
S C+ TYV K++ +++ I CP +C L A +C++ LP + A +
Sbjct: 230 SHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECKSFLPVTTFKSFEEA--NVCSKNNG 287
Query: 174 KFYCPFVDCSAMLIDDGVEKVTES----------------ECPNCRRLFCAQCKVPWHNE 217
K YCP+ +CS +L D E ++ ECP C R C C VPWH
Sbjct: 288 KIYCPYPNCSFLL--DPQECLSSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHAS 345
Query: 218 VTCEEFQKMNQEEKG----LVVKLA--KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSD 271
++CEEFQ + +E+ + +LA K ++C CR I + C + CRCG+ C
Sbjct: 346 MSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQCRIMIELAQGCNHMTCRCGHEFCYS 405
Query: 272 TAGE 275
E
Sbjct: 406 CGAE 409
>AT5G37560.1 | Symbols: | RING/U-box superfamily protein |
chr5:14921986-14923790 FORWARD LENGTH=444
Length = 444
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 277 ESSNAAPFICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCS 336
+++ P C IC++ A C H +C CV V+ K+ ++ C GC
Sbjct: 172 KATQEKPLTCSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRSGIVP-PCLEDGCK 230
Query: 337 GLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE-- 394
L E C +L ++ + W + E +I ++EK YCP+ +CS L+ + ++
Sbjct: 231 SELTLESCSMVLTPKLIEMWKRKMEEDLIPDAEKIYCPYRSCSMLMSKTELSREAEQSNV 290
Query: 395 --CPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLY 452
C C LFC CKVPWH+ ++C +Y+++ +R D+ML LA D+ WR+C CK
Sbjct: 291 RACIKCSELFCIDCKVPWHSDLSCADYKRI-HSERLVNDMMLKVLANDQMWRQCSECKHM 349
Query: 453 VAKSEGCMYMRCRCGHTFCYNCGTPNLNKKSHY 485
+ +EGC ++ CRCG+ FCY CG K HY
Sbjct: 350 IELTEGCNHITCRCGYEFCYRCG-HKWTKYHHY 381
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 116 CVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKF 175
CV V KL+ I C C L E C +L P++++ W + E +I +EK
Sbjct: 207 CVKQQVKVKLRSG-IVPPCLEDGCKSELTLESCSMVLTPKLIEMWKRKMEEDLIPDAEKI 265
Query: 176 YCPFVDCSAMLIDDGVEKVTESE----CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQE-- 229
YCP+ CS ++ + + E C C LFC CKVPWH++++C ++++++ E
Sbjct: 266 YCPYRSCSMLMSKTELSREAEQSNVRACIKCSELFCIDCKVPWHSDLSCADYKRIHSERL 325
Query: 230 --EKGLVVKLAKEM-KKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
+ L V +M ++C C+ I ++ C I CRCGY C
Sbjct: 326 VNDMMLKVLANDQMWRQCSECKHMIELTEGCNHITCRCGYEFC 368
>AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24252226-24254710 FORWARD
LENGTH=655
Length = 655
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 19/204 (9%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C IC A F + C H +C CV +V K+ + KCP GC L + C
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAP-KCPHDGCKSELVIDACG 359
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQS------------ 393
+L ++ W + E I +E+ YCP+ CSAL+ + K+S+S
Sbjct: 360 KLLTPKLSKLWQQRLQENAIPVTERVYCPYPRCSALM---SKTKISESAKSLLSLYPKSG 416
Query: 394 --ECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKL 451
C +CR LFC CKVPWH ++C EY+KL + +D+ L LA +K WR+C C+
Sbjct: 417 VRRCVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPA-DDVKLKSLANNKMWRQCGKCQH 475
Query: 452 YVAKSEGCMYMRCRCGHTFCYNCG 475
+ S+GC ++ CRCGH FCYNCG
Sbjct: 476 MIELSQGCNHITCRCGHEFCYNCG 499
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
+CV +V KL + CP C L + C +L P++ W L E I +E+
Sbjct: 326 QCVKQHVEVKLLHG-MAPKCPHDGCKSELVIDACGKLLTPKLSKLWQQRLQENAIPVTER 384
Query: 175 FYCPFVDCSAMLIDDGVEKVTES-----------ECPNCRRLFCAQCKVPWHNEVTCEEF 223
YCP+ CSA++ + + +S C CR LFC CKVPWH ++C E+
Sbjct: 385 VYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECRGLFCVDCKVPWHGNLSCTEY 444
Query: 224 QKMNQEEKGLVVKLA-----KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSDTAG 274
+K++ E VKL K ++C C+ I S C I CRCG+ C + G
Sbjct: 445 KKLHPEPPADDVKLKSLANNKMWRQCGKCQHMIELSQGCNHITCRCGHEFCYNCGG 500
>AT3G45470.1 | Symbols: | IBR domain containing protein |
chr3:16680505-16681261 REVERSE LENGTH=222
Length = 222
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C IC E A F + C H +C CV V K+ + C C L E+C
Sbjct: 6 CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPT-CLDYECKLKLSLENCF 64
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE------CPDCR 399
+L +V + W E I +++ YCP+ NCS L+ + ++S+S C C
Sbjct: 65 KVLKPKVIELWKHMMKEESIPLAKRIYCPYINCSTLM---SKTEISRSNKSNDRACIKCS 121
Query: 400 RLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGC 459
L C CKVPWH+ ++C EY+KL D +DL L LA D+KWR+C C+ + ++GC
Sbjct: 122 GLVCIDCKVPWHSDLSCAEYKKLHPDPV-LDDLTLKLLANDQKWRQCVKCRHLIELNQGC 180
Query: 460 MYMRCRCGHTFCYNCGT 476
+M CRCG+ FCY CG
Sbjct: 181 NHMTCRCGYQFCYKCGV 197
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 116 CVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKF 175
CV V KL+ + TC EC L E+C +L P+V++ W + E I +++
Sbjct: 32 CVNQLVEVKLRNGTVP-TCLDYECKLKLSLENCFKVLKPKVIELWKHMMKEESIPLAKRI 90
Query: 176 YCPFVDCSAMLIDDGVEKVTESE---CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEE-- 230
YCP+++CS ++ + + +S C C L C CKVPWH++++C E++K++ +
Sbjct: 91 YCPYINCSTLMSKTEISRSNKSNDRACIKCSGLVCIDCKVPWHSDLSCAEYKKLHPDPVL 150
Query: 231 KGLVVKLA---KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSDTAGEGESSNAA 282
L +KL ++ ++C CR I + C + CRCGY C E +
Sbjct: 151 DDLTLKLLANDQKWRQCVKCRHLIELNQGCNHMTCRCGYQFCYKCGVEWKKGQVT 205
>AT2G25360.1 | Symbols: | RING/U-box superfamily protein |
chr2:10804249-10805761 FORWARD LENGTH=373
Length = 373
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 96/195 (49%), Gaps = 7/195 (3%)
Query: 285 ICEICTETKTAWESFGIT-GCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAED 343
IC IC E F T C H +C CV YV K+ + C GC L E
Sbjct: 89 ICSICFEETEGERMFFTTEKCVHRHCFPCVKQYVEVKLLSGTVPT-CLDDGCKFKLTLES 147
Query: 344 CRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALL----IDDGRVKVSQSECPDCR 399
C +L E+ + W + E I +E+ YCP+ NCS L+ + + C C
Sbjct: 148 CSKVLTLELIEMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTELSSESDLSNDRSCVKCC 207
Query: 400 RLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGC 459
LFC CKVP H+ ++C EY+KL D E L L LAKDKKWR+C C+ + S C
Sbjct: 208 GLFCIDCKVPSHSDLSCAEYKKLHHDPLVDE-LKLKSLAKDKKWRQCKMCRHMIELSHAC 266
Query: 460 MYMRCRCGHTFCYNC 474
+M CRCG+ FCY C
Sbjct: 267 NHMTCRCGYQFCYQC 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 116 CVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKF 175
CV YV KL + TC C L E C +L E+++ W + E I A+E+
Sbjct: 117 CVKQYVEVKLLSGTVP-TCLDDGCKFKLTLESCSKVLTLELIEMWKQKMKEDSIPAAERI 175
Query: 176 YCPFVDCSAMLIDDGVEKVTESECPNCRR------LFCAQCKVPWHNEVTCEEFQKMNQE 229
YCP+ +CS ++ E +ES+ N R LFC CKVP H++++C E++K++ +
Sbjct: 176 YCPYPNCSMLM--SKTELSSESDLSNDRSCVKCCGLFCIDCKVPSHSDLSCAEYKKLHHD 233
Query: 230 EKGLVVKLA-----KEMKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
+KL K+ ++C CR I S C + CRCGY C
Sbjct: 234 PLVDELKLKSLAKDKKWRQCKMCRHMIELSHACNHMTCRCGYQFC 278
>AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16729989-16731511 REVERSE LENGTH=408
Length = 408
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 286 CEICTETKTAWE-SFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDC 344
C IC++ E F + C H +C +CV ++ ++ + +C C L +C
Sbjct: 173 CSICSDDNFEPELMFSVALCGHEFCVECVKRHIEVRLLAGGVP-RCLHYQCESKLTLANC 231
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSAL-----LIDDGRVKVSQSECPDCR 399
+L ++ W E I E+ YCP CS+L L + R V+ C C
Sbjct: 232 ANLLTSKLKAMWELRIEEESIPVEERVYCPNPRCSSLMSVTKLSNSTREDVTMRSCVKCG 291
Query: 400 RLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGC 459
FC CK+PWH+ ++C +Y+ LG + +D+ L LA K WR+C NCK + SEGC
Sbjct: 292 EPFCINCKLPWHSNLSCNDYKSLGPNPTA-DDIKLKALANQKMWRQCENCKNVIELSEGC 350
Query: 460 MYMRCRCGHTFCYNCG 475
M++ CRCGH FCY CG
Sbjct: 351 MHITCRCGHQFCYKCG 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
ECV ++ +L + C +C L +C +L ++ W + E I E+
Sbjct: 199 ECVKRHIEVRLLAGGVP-RCLHYQCESKLTLANCANLLTSKLKAMWELRIEEESIPVEER 257
Query: 175 FYCPFVDCSAM-----LIDDGVEKVTESECPNCRRLFCAQCKVPWHNEVTCEEFQKMNQE 229
YCP CS++ L + E VT C C FC CK+PWH+ ++C +++ +
Sbjct: 258 VYCPNPRCSSLMSVTKLSNSTREDVTMRSCVKCGEPFCINCKLPWHSNLSCNDYKSLGPN 317
Query: 230 EKGLVVKL-----AKEMKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
+KL K ++C NC+ I S+ C I CRCG+ C
Sbjct: 318 PTADDIKLKALANQKMWRQCENCKNVIELSEGCMHITCRCGHQFC 362
>AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16706312-16707649 REVERSE LENGTH=348
Length = 348
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 10/198 (5%)
Query: 286 CEICTETKTAW-ESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDC 344
C+IC + + F + C H +CSDC+ ++ ++ E + ++CP C L+ C
Sbjct: 100 CKICLDDDINENQMFCVGKCRHRFCSDCMRRHIEVRLLEGSV-MRCPHYRCKTTLKFGGC 158
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE------CPDC 398
+L ++ + W + E +I + + YCP + CSAL+ + + +S E C C
Sbjct: 159 INLLTPKIREMWQQRIKEDLIPVTGRIYCPNSRCSALM-SETELSISTKEDEVRRCCFKC 217
Query: 399 RRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEG 458
++FC +CKV WH+ ++C +Y+KL + D + LA K+WR+C C+ + S+G
Sbjct: 218 GQIFCIKCKVSWHSNLSCNDYKKLNPYP-TENDGKIKALANQKRWRQCGKCQHMIELSKG 276
Query: 459 CMYMRCRCGHTFCYNCGT 476
C+ ++CRCGH FCY CG
Sbjct: 277 CVQVKCRCGHKFCYRCGV 294
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
S+C+ ++ +L + + + CP C L+ C +L P++ + W + E +I +
Sbjct: 125 SDCMRRHIEVRLLEGSV-MRCPHYRCKTTLKFGGCINLLTPKIREMWQQRIKEDLIPVTG 183
Query: 174 KFYCPFVDCSAMLIDDGVEKVTESE-----CPNCRRLFCAQCKVPWHNEVTCEEFQKMN- 227
+ YCP CSA++ + + T+ + C C ++FC +CKV WH+ ++C +++K+N
Sbjct: 184 RIYCPNSRCSALMSETELSISTKEDEVRRCCFKCGQIFCIKCKVSWHSNLSCNDYKKLNP 243
Query: 228 --QEEKGLVVKLA--KEMKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
E G + LA K ++C C+ I S C ++CRCG+ C
Sbjct: 244 YPTENDGKIKALANQKRWRQCGKCQHMIELSKGCVQVKCRCGHKFC 289
>AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11130119-11131514 FORWARD LENGTH=384
Length = 384
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 286 CEICTETK-TAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDC 344
C IC + A F I C H +CS+CV ++ + + + I CP C L C
Sbjct: 153 CTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQGSL-ITCPSYRCKSKLTYGSC 211
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALL--IDDGRVKVSQSECPDCRRLF 402
IL +V + W + E I +++ YCP CSAL+ + ++ S+ C C F
Sbjct: 212 VNILTPKVKEMWIQRMGEDSIPVTDRVYCPNPTCSALMSVTELDQLTGSKRCCVKCGESF 271
Query: 403 CAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCMYM 462
C +CKVPWH ++C Y+KL +R D L +LA + WR+C CK + ++GC+ +
Sbjct: 272 CIKCKVPWHDNLSCKRYKKL-HSNRTTNDKQLNELANQESWRQCSKCKHMIELTQGCVRV 330
Query: 463 RCRCGHTFCYNCG 475
CRCGH FCY CG
Sbjct: 331 ICRCGHEFCYGCG 343
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
SECV ++ L Q + ITCP C L C IL P+V + W+ + E I ++
Sbjct: 178 SECVKRHIEVSLLQGSL-ITCPSYRCKSKLTYGSCVNILTPKVKEMWIQRMGEDSIPVTD 236
Query: 174 KFYCPFVDCSAMLIDDGVEKVTESE--CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEE- 230
+ YCP CSA++ ++++T S+ C C FC +CKVPWH+ ++C+ ++K++
Sbjct: 237 RVYCPNPTCSALMSVTELDQLTGSKRCCVKCGESFCIKCKVPWHDNLSCKRYKKLHSNRT 296
Query: 231 --KGLVVKLAKE--MKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
+ +LA + ++C C+ I + C + CRCG+ C
Sbjct: 297 TNDKQLNELANQESWRQCSKCKHMIELTQGCVRVICRCGHEFC 339
>AT2G21420.1 | Symbols: | IBR domain containing protein |
chr2:9169713-9171746 FORWARD LENGTH=468
Length = 468
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C IC E A F C H C CV +V+ + I+ C C+ L E C
Sbjct: 187 CCICRENTDADRMFFTENCFHRQCFSCVNRHVQRMLLCG-ISPTCLHFPCNSELTFESCS 245
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE----CPDCRRL 401
+L + + W + E ++ ++K YCP+ CS L+ + + C C RL
Sbjct: 246 KVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSMLMSKTALSRETDQSNVRACIKCCRL 305
Query: 402 FCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCMY 461
FC CKVP HAG++CV+Y+KL D D+ L LA KKWR+C C V EGC +
Sbjct: 306 FCIDCKVPSHAGLSCVDYKKLNPDPL--YDVKLKSLANKKKWRQCVQCSNLVELFEGCNH 363
Query: 462 MRCRCGHTFCYNCG 475
+ CRCG FCY CG
Sbjct: 364 ITCRCGFEFCYVCG 377
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 130 INITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKFYCPFVDCSAMLIDD 189
I+ TC C L E C +L P +++ W + E ++ A++K YCP+ CS ++
Sbjct: 226 ISPTCLHFPCNSELTFESCSKVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSMLMSKT 285
Query: 190 GVEKVTESE----CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEE------KGLVVKLAK 239
+ + T+ C C RLFC CKVP H ++C +++K+N + K L K K
Sbjct: 286 ALSRETDQSNVRACIKCCRLFCIDCKVPSHAGLSCVDYKKLNPDPLYDVKLKSLANK--K 343
Query: 240 EMKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
+ ++C C + + C I CRCG+ C
Sbjct: 344 KWRQCVQCSNLVELFEGCNHITCRCGFEFC 373
>AT2G25370.2 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=546
Length = 546
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C I E F C H +C CV +V+ K+ C GC L E C
Sbjct: 247 CGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGT-EPTCLEYGCKFKLTLERCS 305
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE-------CPDC 398
+L ++ + W + E I +E+ YCP+ NCS L+ + ++S C C
Sbjct: 306 KVLTLKLIEMWKQKMKEDSIPAAERIYCPYPNCSMLM---SKTELSSEADLSNVRTCVKC 362
Query: 399 RRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEG 458
LFC CKVP H ++ +Y+KL D +DL L LA DK WR+C C+ + S G
Sbjct: 363 CGLFCIDCKVPSHTDLSYDDYKKLHPDPL-VDDLKLKSLANDKMWRQCVKCRHMIELSHG 421
Query: 459 CMYMRCRCGHTFCYNCG 475
C +M CRCG+ FCY CG
Sbjct: 422 CNHMTCRCGYEFCYECG 438
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 116 CVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKF 175
CV +V KL+ TC C L E C +L ++++ W + E I A+E+
Sbjct: 273 CVKQHVKVKLRSG-TEPTCLEYGCKFKLTLERCSKVLTLKLIEMWKQKMKEDSIPAAERI 331
Query: 176 YCPFVDCSAMLIDDGVEKVTESECPNCRR------LFCAQCKVPWHNEVTCEEFQKMNQE 229
YCP+ +CS ++ E +E++ N R LFC CKVP H +++ ++++K++ +
Sbjct: 332 YCPYPNCSMLM--SKTELSSEADLSNVRTCVKCCGLFCIDCKVPSHTDLSYDDYKKLHPD 389
Query: 230 EKGLVVKLA-----KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSDTAGEGESSNAAPF 284
+KL K ++C CR I S C + CRCGY C + E + +
Sbjct: 390 PLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTCRCGYEFCYECGIEWQKRDKVIM 449
Query: 285 ICEICTET 292
+ +I T
Sbjct: 450 MMKIAMMT 457
>AT2G25370.1 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=603
Length = 603
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C I E F C H +C CV +V+ K+ C GC L E C
Sbjct: 304 CGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGT-EPTCLEYGCKFKLTLERCS 362
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE-------CPDC 398
+L ++ + W + E I +E+ YCP+ NCS L+ + ++S C C
Sbjct: 363 KVLTLKLIEMWKQKMKEDSIPAAERIYCPYPNCSMLM---SKTELSSEADLSNVRTCVKC 419
Query: 399 RRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEG 458
LFC CKVP H ++ +Y+KL D +DL L LA DK WR+C C+ + S G
Sbjct: 420 CGLFCIDCKVPSHTDLSYDDYKKLHPDPL-VDDLKLKSLANDKMWRQCVKCRHMIELSHG 478
Query: 459 CMYMRCRCGHTFCYNCG 475
C +M CRCG+ FCY CG
Sbjct: 479 CNHMTCRCGYEFCYECG 495
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 116 CVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKF 175
CV +V KL+ TC C L E C +L ++++ W + E I A+E+
Sbjct: 330 CVKQHVKVKLRSG-TEPTCLEYGCKFKLTLERCSKVLTLKLIEMWKQKMKEDSIPAAERI 388
Query: 176 YCPFVDCSAMLIDDGVEKVTESECPNCRR------LFCAQCKVPWHNEVTCEEFQKMNQE 229
YCP+ +CS ++ E +E++ N R LFC CKVP H +++ ++++K++ +
Sbjct: 389 YCPYPNCSMLM--SKTELSSEADLSNVRTCVKCCGLFCIDCKVPSHTDLSYDDYKKLHPD 446
Query: 230 EKGLVVKLA-----KEMKKCPNCRFYIAKSDDCEVIRCRCGYAECSDTAGEGESSNAAPF 284
+KL K ++C CR I S C + CRCGY C + E + +
Sbjct: 447 PLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTCRCGYEFCYECGIEWQKRDKVIM 506
Query: 285 ICEICTET 292
+ +I T
Sbjct: 507 MMKIAMMT 514
>AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11127134-11128476 FORWARD LENGTH=398
Length = 398
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 286 CEIC-TETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDC 344
C IC + A + F + H CS+CV ++ ++ E + I CP C+ LL + C
Sbjct: 159 CNICLNDDINADQMFSVDKSGHMCCSECVKRHIEVRLLEGSL-ITCPHYRCNSLLTSVRC 217
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLID---DGRVKVSQSECPDCRRL 401
+L ++ W + + +I ++ YCP CS L+ + G + C C
Sbjct: 218 GNLLTPKLNKMWEQKTKDELIPVMDRVYCPNPRCSTLMSETELSGLNIGVRRCCVKCGEP 277
Query: 402 FCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCMY 461
FC +CKV WH ++C EY+ L + + D L LA +K WR+C CK + S GC+
Sbjct: 278 FCVKCKVSWHNNLSCDEYKTLHPNPT-ENDGRLRDLANEKSWRQCSKCKHMIELSSGCIS 336
Query: 462 MRCRCGHTFCYNCG 475
+ CRCGHTFCY CG
Sbjct: 337 VVCRCGHTFCYQCG 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 114 SECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE 173
SECV ++ +L + + ITCP C LL + C +L P++ W + +I +
Sbjct: 184 SECVKRHIEVRLLEGSL-ITCPHYRCNSLLTSVRCGNLLTPKLNKMWEQKTKDELIPVMD 242
Query: 174 KFYCPFVDCSAMLID---DGVEKVTESECPNCRRLFCAQCKVPWHNEVTCEEFQKMN--- 227
+ YCP CS ++ + G+ C C FC +CKV WHN ++C+E++ ++
Sbjct: 243 RVYCPNPRCSTLMSETELSGLNIGVRRCCVKCGEPFCVKCKVSWHNNLSCDEYKTLHPNP 302
Query: 228 QEEKGLVVKLAKEM--KKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
E G + LA E ++C C+ I S C + CRCG+ C
Sbjct: 303 TENDGRLRDLANEKSWRQCSKCKHMIELSSGCISVVCRCGHTFC 346
>AT3G45555.1 | Symbols: | RING/U-box protein |
chr3:16712368-16713009 REVERSE LENGTH=213
Length = 213
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 283 PFICEIC-TETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEA 341
P C IC + + + + + C+H +C +C+ Y+ ++ E + I CP C L
Sbjct: 14 PETCSICFNDDFKSEQMYYVALCNHKFCLECMKRYIEVRLLEGTVLI-CPYYQCESKLTL 72
Query: 342 EDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALL---------IDDGRVKVSQ 392
+ C IL ++ W + E I +E+FYCP CSAL+ ++DG V+
Sbjct: 73 KSCFHILTSKLKAMWEQKIEEESIPVTERFYCPNPRCSALMSKIELSKSTLEDGFVR--- 129
Query: 393 SECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLY 452
C C FC CKV W + ++C +KLG ++ +D ML LA +KKWR+C C+
Sbjct: 130 --CFQCGERFCINCKVSWQSNLSCDNCKKLG-NNPTSDDKMLKVLANEKKWRQCEKCQHM 186
Query: 453 VAKSEGCMYMRCR--CGHTFCYN 473
+ SEGC+++ C H YN
Sbjct: 187 IKLSEGCIHVTCMYLSNHFLNYN 209
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
EC+ Y+ +L + + + CP +C L + C IL ++ W + E I +E+
Sbjct: 43 ECMKRYIEVRLLEGTV-LICPYYQCESKLTLKSCFHILTSKLKAMWEQKIEEESIPVTER 101
Query: 175 FYCPFVDCSAMLIDDGVEKVTESE----CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQ-- 228
FYCP CSA++ + K T + C C FC CKV W + ++C+ +K+
Sbjct: 102 FYCPNPRCSALMSKIELSKSTLEDGFVRCFQCGERFCINCKVSWQSNLSCDNCKKLGNNP 161
Query: 229 --EEKGL-VVKLAKEMKKCPNCRFYIAKSDDCEVIRC 262
++K L V+ K+ ++C C+ I S+ C + C
Sbjct: 162 TSDDKMLKVLANEKKWRQCEKCQHMIKLSEGCIHVTC 198
>AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:15646460-15647566 FORWARD
LENGTH=346
Length = 346
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 276 GESSNAAPFICEIC-TETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSG 334
E S P C IC A + F + C H +C +CV Y+ K+ E + +C
Sbjct: 145 SEISICMPATCSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEGGVP-RCLDYQ 203
Query: 335 CSGLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE 394
C L C +L ++ W + E +I +E+ YCP CS L+ + ++S S
Sbjct: 204 CESKLTLTSCGNLLTPKLKAIWKQRIEEELILVAERVYCPNPRCSGLM---SKTELSTST 260
Query: 395 ---------CPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRR 445
C C FC CKVPWH+ ++C +Y++LG + K D+ L LA +KW +
Sbjct: 261 EEDVSTRTCCVKCGEPFCINCKVPWHSNLSCDDYKRLGPNP-TKNDIKLKVLANQQKWSQ 319
Query: 446 CPNCKLYVAKSEGCMYMRCRCGHTF 470
C C+ +A+ EGC + CR H +
Sbjct: 320 CAKCQHMIARIEGCNVIICRYHHRY 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
ECV Y+ KL + + C +C L C +L P++ W + E +I +E+
Sbjct: 181 ECVKHYIEVKLLEGGVP-RCLDYQCESKLTLTSCGNLLTPKLKAIWKQRIEEELILVAER 239
Query: 175 FYCPFVDCSAMLIDDGVEKVTESE------CPNCRRLFCAQCKVPWHNEVTCEEFQKM-- 226
YCP CS ++ + TE + C C FC CKVPWH+ ++C++++++
Sbjct: 240 VYCPNPRCSGLMSKTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWHSNLSCDDYKRLGP 299
Query: 227 NQEEKGLVVK-LAKEMK--KCPNCRFYIAKSDDCEVIRCR 263
N + + +K LA + K +C C+ IA+ + C VI CR
Sbjct: 300 NPTKNDIKLKVLANQQKWSQCAKCQHMIARIEGCNVIICR 339
>AT2G19610.2 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485863 FORWARD LENGTH=418
Length = 418
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C +C + + F + GC H C C+ S+ CP C L EDCR
Sbjct: 203 CPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAICPYPDCENDLVPEDCR 262
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVK-VSQS--------ECP 396
A + + E I ++ YCP +CS L+ D ++ +S++ +C
Sbjct: 263 AFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKCM 322
Query: 397 DCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIK-LAKDKKWRRCPNCKLYVAK 455
+C FC +C VPWH TC E++K + K D +++ K + W++C C+ V
Sbjct: 323 ECGLSFCKKCHVPWHYKKTCDEFKK--SESYLKSDAAILESFVKTQGWKKCSQCQSIVQH 380
Query: 456 SEGCMYMRCR-CGHTFCYNCGTP 477
GC M CR C H FCY CG P
Sbjct: 381 GGGCQQMTCRHCKHEFCYTCGAP 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 134 CPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKFYCPFVDCSAMLID-DGVE 192
CP P+C L EDCRA + + + E I ++ YCP CS ++ D D +
Sbjct: 247 CPYPDCENDLVPEDCRAFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIR 306
Query: 193 KVTES--------ECPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKGLVVKL-----AK 239
++++ +C C FC +C VPWH + TC+EF+K K L +
Sbjct: 307 HISKNPRHSEEARKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQ 366
Query: 240 EMKKCPNCRFYIAKSDDCEVIRCR 263
KKC C+ + C+ + CR
Sbjct: 367 GWKKCSQCQSIVQHGGGCQQMTCR 390
>AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16683263-16684592 REVERSE LENGTH=382
Length = 382
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 299 FGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCRAILPEEVFDRWGK 358
F CSH +C +C+ ++ + E + +CP GC+ L C +L + + W K
Sbjct: 170 FSADLCSHYFCVECMKEHIEVSLNEGGLP-RCPHDGCTSNLTLRSCDHLLTPKQREMWEK 228
Query: 359 AASEAMIAESEKFYCPFANCSALLIDDGRVKVSQSE-----CPDCRRLFCAQCKVPWHAG 413
E I ++F+CP C AL+ + ++ + C CR+ FC CKVPWH+
Sbjct: 229 RIKEESIPVCDRFHCPNPRCWALMSKTELTESTEEDGVRRCCYKCRKHFCINCKVPWHSN 288
Query: 414 VTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCMYMRCRCGHTFCYN 473
++C E++ G+E + + WR+C +C + SE M + CRCG+ FCY
Sbjct: 289 LSCKEHK-----SSGREPITTV-------WRQCRSCLHKIKLSEERMPVTCRCGYKFCYA 336
Query: 474 CG 475
CG
Sbjct: 337 CG 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
EC+ ++ L + + CP CT L C +L P+ + W + E I ++
Sbjct: 182 ECMKEHIEVSLNEGGLP-RCPHDGCTSNLTLRSCDHLLTPKQREMWEKRIKEESIPVCDR 240
Query: 175 FYCPFVDCSAMLIDDGVEKVTESE-----CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQE 229
F+CP C A++ + + TE + C CR+ FC CKVPWH+ ++C+E + +E
Sbjct: 241 FHCPNPRCWALMSKTELTESTEEDGVRRCCYKCRKHFCINCKVPWHSNLSCKEHKSSGRE 300
Query: 230 EKGLVVKLAKEMKKCPNCRFYIAKSDDCEVIRCRCGYAEC 269
V ++C +C I S++ + CRCGY C
Sbjct: 301 PITTV------WRQCRSCLHKIKLSEERMPVTCRCGYKFC 334
>AT3G45460.1 | Symbols: | IBR domain containing protein |
chr3:16678680-16680043 REVERSE LENGTH=389
Length = 389
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 273 AGEGESSNAAPFICEICTETKTAWE-SFGITGCSHAYCSDCVAMYVRSKVEENVINIKCP 331
A E S P + C E E F + C H + + + ++ ++ E + +CP
Sbjct: 157 AKESISIRTPPTEQKACGEVNIEHELMFSVALCRHQFGVEWMKQHIEVRLIEGDVP-RCP 215
Query: 332 VSGCSGLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVKVS 391
GC +L + C +L ++ + W E I ++F+CP C AL+ V+ +
Sbjct: 216 HDGCKSILSLKSCSHLLTPKLEEMWEHRIKEEFIPVCDRFHCPNPRCWALMSKTELVEST 275
Query: 392 QSE----CPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCP 447
+ C CR+ FC CKV WH+ ++C EY+ LG++ + R+C
Sbjct: 276 EDGVRRCCFKCRKAFCINCKVLWHSDLSCKEYKTLGRNPKTIS-------------RQCK 322
Query: 448 NCKLYVAKSEGCMYMRCRCGHTFCYNCG 475
C+ + S + + CRCG++FCY CG
Sbjct: 323 KCQHMIKLSHKTINVYCRCGYSFCYTCG 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 134 CPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKFYCPFVDCSAMLIDDGVEK 193
CP C +L + C +L P++ + W + E I ++F+CP C A++ + +
Sbjct: 214 CPHDGCKSILSLKSCSHLLTPKLEEMWEHRIKEEFIPVCDRFHCPNPRCWALMSKTELVE 273
Query: 194 VTESE----CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKGLVVKLAKEMKKCPNCRF 249
TE C CR+ FC CKV WH++++C+E++ + + K + ++C C+
Sbjct: 274 STEDGVRRCCFKCRKAFCINCKVLWHSDLSCKEYKTLGRNPKTIS-------RQCKKCQH 326
Query: 250 YIAKSDDCEVIRCRCGYAEC 269
I S + CRCGY+ C
Sbjct: 327 MIKLSHKTINVYCRCGYSFC 346
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 222 EFQKMNQEEKGLVVKLAKEMKKCPNCRFYIAKSDDCEVIRCRCGYAE---CSDTAGEGES 278
E Q + ++ G+ +KL N R+++ + + +R + + GE
Sbjct: 1505 ELQGIKEKVHGVDLKL--------NTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEK 1556
Query: 279 SNAAPFICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEE-NVINIKCPVSGCSG 337
+ C IC + + + GCSH +C C+ + + + I C C
Sbjct: 1557 PDEIEVECPICLSEVD--DGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGA 1614
Query: 338 LLEAEDCRAILPEEVFDRWGKAASEAMIAESE-KF-YCPFANCSALLIDDGRVKVSQSE- 394
+ D RA+L +E D A+ + + S+ KF +C +C ++ RV Q
Sbjct: 1615 PIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVY----RVAGPQESG 1670
Query: 395 ----CPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCK 450
C C C +C + +H +TC Y+K ++ DL L AK K + CP CK
Sbjct: 1671 EPFICGACHSEICTRCHLEYHPLITCERYKKFKENP----DLSLKDWAKGKNVKECPICK 1726
Query: 451 LYVAKSEGCMYMRCRCGHTFCYNC 474
+ K++GC +M+CRCG C+ C
Sbjct: 1727 STIEKTDGCNHMKCRCGKHICWTC 1750
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 132 ITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASE-KF-YCPFVDCSAMLIDD 189
I C +C + D RA+L E +D +A + +T+S+ KF +C DC ++
Sbjct: 1605 ILCSHIDCGAPIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVA 1664
Query: 190 GVEKVTESE-CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKGLVVK---LAKEMKKCP 245
G ++ E C C C +C + +H +TCE ++K +E L +K K +K+CP
Sbjct: 1665 GPQESGEPFICGACHSEICTRCHLEYHPLITCERYKKF-KENPDLSLKDWAKGKNVKECP 1723
Query: 246 NCRFYIAKSDDCEVIRCRCGYAEC 269
C+ I K+D C ++CRCG C
Sbjct: 1724 ICKSTIEKTDGCNHMKCRCGKHIC 1747
>AT2G19610.1 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485723 FORWARD LENGTH=397
Length = 397
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C +C + + F + GC H C C+ S+ CP C L EDCR
Sbjct: 203 CPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAICPYPDCENDLVPEDCR 262
Query: 346 AILPEEVFDRWGKAASEAMIAESEKFYCPFANCSALLIDDGRVK-VSQS--------ECP 396
A + + E I ++ YCP +CS L+ D ++ +S++ +C
Sbjct: 263 AFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKCM 322
Query: 397 DCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIK-LAKDKKWRRCPNCKLYVAK 455
+C FC +C VPWH TC E++K + K D +++ K + W++C C+ V
Sbjct: 323 ECGLSFCKKCHVPWHYKKTCDEFKK--SESYLKSDAAILESFVKTQGWKKCSQCQSIVQH 380
Query: 456 SEGCMYMRCR 465
GC M CR
Sbjct: 381 GGGCQQMTCR 390
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 134 CPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEKFYCPFVDCSAMLID-DGVE 192
CP P+C L EDCRA + + + E I ++ YCP CS ++ D D +
Sbjct: 247 CPYPDCENDLVPEDCRAFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIR 306
Query: 193 KVTES--------ECPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKGLVVKL-----AK 239
++++ +C C FC +C VPWH + TC+EF+K K L +
Sbjct: 307 HISKNPRHSEEARKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQ 366
Query: 240 EMKKCPNCRFYIAKSDDCEVIRCR 263
KKC C+ + C+ + CR
Sbjct: 367 GWKKCSQCQSIVQHGGGCQQMTCR 390
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 29/264 (10%)
Query: 222 EFQKMNQEEKGLVVKLAKEMKKCPNCRFYIAKSDDCEVIRCRCGYAE---CSDTAGEGES 278
E Q + ++ G+ +KL N R+++ + + +R + + GE
Sbjct: 1502 ELQGIKEKVHGVDLKL--------NTRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEK 1553
Query: 279 SNAAPFICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEE-NVINIKCPVSGCSG 337
+ C IC + + + GCSH +C C+ + + + I C C
Sbjct: 1554 PDEIELECPICLSEVD--DGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGA 1611
Query: 338 LLEAEDCRAILPEEVFDRWGKAASEAMIAESEK--FYCPFANCSALLIDDGRVKVSQSE- 394
+ D RA+L +E D A+ A + S+ +C +C ++ RV Q
Sbjct: 1612 PIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIY----RVAGPQESG 1667
Query: 395 ----CPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCK 450
C C C +C + +H +TC Y+K ++ DL L AK K + CP CK
Sbjct: 1668 EPFICGACHSETCTRCHLEYHPLITCERYKKFKEN----PDLSLKDWAKGKDVKECPICK 1723
Query: 451 LYVAKSEGCMYMRCRCGHTFCYNC 474
+ K++GC +++CRCG C+ C
Sbjct: 1724 STIEKTDGCNHLQCRCGKHICWTC 1747
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 132 ITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK--FYCPFVDCSAMLIDD 189
I C +C + D RA+L E +D ++A A +T+S+ +C DC ++
Sbjct: 1602 ILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVA 1661
Query: 190 GVEKVTESE-CPNCRRLFCAQCKVPWHNEVTCEEFQKMNQEEKGLVVK---LAKEMKKCP 245
G ++ E C C C +C + +H +TCE ++K +E L +K K++K+CP
Sbjct: 1662 GPQESGEPFICGACHSETCTRCHLEYHPLITCERYKKF-KENPDLSLKDWAKGKDVKECP 1720
Query: 246 NCRFYIAKSDDCEVIRCRCGYAEC 269
C+ I K+D C ++CRCG C
Sbjct: 1721 ICKSTIEKTDGCNHLQCRCGKHIC 1744
>AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 |
chr1:11663462-11666037 REVERSE LENGTH=688
Length = 688
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 292 TKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVIN-IKCPVSGCSGLLEAEDCRAILPE 350
+++A F C H +C C+ Y V E +N +KCP S C + + +L +
Sbjct: 383 SESAGIDFVKLPCQHFFCLKCMKTYTDIHVTEGTVNKLKCPDSKCGETVPPGILKRLLGD 442
Query: 351 EVFDRWGKAASEAMI-AESEKFYCPFANCSALLIDDGRVKVSQSECPDCRRLFCAQCKVP 409
E ++RW + + + ++ YCP C I+D + + C C FC CK
Sbjct: 443 EAYERWETLMLQKTLESMTDVAYCP--RCETPCIED---EEQLALCFKCYFSFCTLCKEK 497
Query: 410 WHAGVTCV-------------EYQKLGKDDRGKE-----DLMLIKLAKDKKWRRCPNCKL 451
H GV C+ + +LG++ R KE ++M +K+ K ++CP+CK+
Sbjct: 498 RHVGVACMSPELRLQILQERQDSSRLGEEQRRKEKEMINEIMSVKVIM-KSAKQCPSCKI 556
Query: 452 YVAKSEGCMYMRC-RCGHTFCYNCG 475
++++ GC M C CG FCY C
Sbjct: 557 AISRTGGCNKMVCNNCGQYFCYRCN 581
>AT5G07640.1 | Symbols: | RING/U-box superfamily protein |
chr5:2414847-2415876 FORWARD LENGTH=316
Length = 316
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCR 345
C +C E T+ E F + GC H +C DC+ +E + CP GC+ L+ EDC
Sbjct: 157 CPVCYEHVTSDEKFEVPGCFHRFCFDCIKKQADVALEFAKPVVNCPSFGCNSELQREDCE 216
Query: 346 AILPEEVFDRWGKAASEAMI-AESEKFYCPFANCSALLIDDGRVKVSQS----------- 393
+L + DR +MI A+ F C C ++ ++ +++
Sbjct: 217 GVLKPKQLDRMTMYKKASMIKAKVLDFVCC-TTCDNVMAKPDLIEYTKTFFVDAELSGVR 275
Query: 394 ECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDL 432
+C +C FC +C+ WH+G+TC EY K ++ ED+
Sbjct: 276 KCTECGYCFCGECRAGWHSGMTCEEYFKRESNEPSPEDV 314
>AT3G45510.1 | Symbols: | RING/U-box protein |
chr3:16690790-16691728 REVERSE LENGTH=257
Length = 257
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 297 ESFGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDCRAILPEEVFDRW 356
E F CSH +C +C+ + + E + +CP GC L C +L + + W
Sbjct: 78 EMFSAALCSHYFCVECMKQRIEVSLNEGGVP-RCPRHGCKSALTLRSCDHLLTPKQREMW 136
Query: 357 GKAASEAMIAESEKFYCPFANCSALL--------IDDGRVKVSQSECPDCRRLFCAQCKV 408
+ E I +F+CP C AL+ DDG + C CR+ FC C V
Sbjct: 137 EQRIKEESIPVCNRFHCPNPKCWALMSKTELTESTDDGVRRC----CSKCRKPFCIDCNV 192
Query: 409 PWHAGVTCVEYQKLG 423
WH+ ++C EY+ G
Sbjct: 193 SWHSNLSCKEYKMKG 207
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
EC+ + L + + CP C L C +L P+ + W + E I +
Sbjct: 92 ECMKQRIEVSLNEGGVP-RCPRHGCKSALTLRSCDHLLTPKQREMWEQRIKEESIPVCNR 150
Query: 175 FYCPFVDCSAML--------IDDGVEKVTESECPNCRRLFCAQCKVPWHNEVTCEEFQ 224
F+CP C A++ DDGV + C CR+ FC C V WH+ ++C+E++
Sbjct: 151 FHCPNPKCWALMSKTELTESTDDGVRRC----CSKCRKPFCIDCNVSWHSNLSCKEYK 204
>AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:16725094-16726116 REVERSE
LENGTH=312
Length = 312
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 286 CEICTETKTAWES-FGITGCSHAYCSDCVAMYVRSKVEENVINIKCPVSGCSGLLEAEDC 344
C IC+ E F + C H +C +CV ++ K+ + +C C L C
Sbjct: 163 CSICSGDNIEPEQIFSVALCGHEFCMECVKQHIEVKLLSGGVP-RCLHYQCESNLTLGSC 221
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKFYCPFANCSAL-----LIDDGRVKVSQSECPDCR 399
IL ++ W E I +E+ YCP CS+L L + R V+ C C
Sbjct: 222 GNILTSKLKAMWELRIEEESIPVAERVYCPNPLCSSLMSVTKLSNSTREDVTMRTCVKCG 281
Query: 400 RLFCAQCKVPWHAGVTCVEYQKLGKD 425
FC CK+PWH+ ++C +Y+ LG +
Sbjct: 282 EPFCINCKLPWHSNLSCNDYKSLGPN 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 115 ECVFTYVSSKLQQNQINITCPIPECTGLLEAEDCRAILPPEVVDRWLTALCEAIITASEK 174
ECV ++ KL + C +C L C IL ++ W + E I +E+
Sbjct: 189 ECVKQHIEVKLLSGGVP-RCLHYQCESNLTLGSCGNILTSKLKAMWELRIEEESIPVAER 247
Query: 175 FYCPFVDCSAM-----LIDDGVEKVTESECPNCRRLFCAQCKVPWHNEVTCEEFQKM 226
YCP CS++ L + E VT C C FC CK+PWH+ ++C +++ +
Sbjct: 248 VYCPNPLCSSLMSVTKLSNSTREDVTMRTCVKCGEPFCINCKLPWHSNLSCNDYKSL 304
>AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily
protein | chr2:13511579-13513550 FORWARD LENGTH=543
Length = 543
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEAED 343
C IC E+ T E C H YC C A Y+ +K+E+ + +KCP CS + +
Sbjct: 128 CGICFESYTR-EEIARVSCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186
Query: 344 CRAILPEEVFDRWGKAASEAMIAESEKF-YCPFANCSALLIDDGRVKVSQSECPDCRRLF 402
+ +V +++ + + + + +K +CP C + G S C F
Sbjct: 187 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRF 246
Query: 403 CAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCMYM 462
C C H+ V C K ++ + + LA K CP CK + K++GC +M
Sbjct: 247 CWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKP---CPECKRPIEKNDGCNHM 303
Query: 463 RCR--CGHTFCYNC 474
C CGH FC+ C
Sbjct: 304 TCSAPCGHEFCWIC 317
>AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily
protein | chr2:13508493-13510390 FORWARD LENGTH=514
Length = 514
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEAED 343
C IC E+ T E ++ C H YC C Y+ +K+E+ + +KCP C ++ +
Sbjct: 121 CGICFESYTRKEIASVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 179
Query: 344 CRAILPEEVFDRWGKAASEAMIAESEKF-YCPFANCSALLIDDGRVKVSQSECPD----C 398
+ ++ D++ + + + + +K +CP C V+ +S D C
Sbjct: 180 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECA------VEFGESSGYDVACLC 233
Query: 399 RRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEG 458
FC C H+ V C K ++ + + LA K CP CK + KS G
Sbjct: 234 SYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSKP---CPKCKRPIEKSHG 290
Query: 459 CMYMRC--RCGHTFCYNCG 475
C +M C CGH FC+ CG
Sbjct: 291 CNHMTCSASCGHRFCWICG 309
>AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517142 FORWARD LENGTH=443
Length = 443
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEAED 343
C IC E+ T E C H YC C Y+ +K+E+ + +KCP C ++ +
Sbjct: 139 CGICFESYTRKE-IARVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 197
Query: 344 CRAILPEEVFDRWGKAASEAMIAESEKF-YCPFANCSALLIDDGRVKVSQSECPD----C 398
+ ++ D++ + + + + +K +CP C + V+ S D C
Sbjct: 198 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAV----EFGVNGSSSYDVSCLC 253
Query: 399 RRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEG 458
FC C H+ V C K ++ + + M LAK K CP CK + K+ G
Sbjct: 254 SYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKTKP---CPKCKRPIEKNTG 310
Query: 459 CMYMRCR--CGHTFCYNCGTPNLNKKS 483
C +M C C H FC+ C P + K+
Sbjct: 311 CNHMSCSAPCRHYFCWACLQPLSDHKA 337
>AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily
protein | chr3:10269304-10270917 FORWARD LENGTH=537
Length = 537
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEEN-VINIKCPVSGCSGLLEAEDC 344
C++C E C H +C+DC + K+ E I C C + + +
Sbjct: 121 CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICDEDVV 180
Query: 345 RAILPEEVFDRWGKAASEAMIAESEKF-YCPFA-NCSALL--IDDGRVKVSQSECPDCRR 400
R ++ E+ DR+ + E+ + ++ +CP +C + + I+DG V + C C
Sbjct: 181 RKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGH-DVVEVGCS-CGL 238
Query: 401 LFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCM 460
FC C H+ +C+ + KL K E + + + K CP C + K +GC
Sbjct: 239 QFCFSCLSESHSPCSCLMW-KLWKKKCEDESETVNWITVNTKL--CPKCSKPIQKRDGCN 295
Query: 461 YMRCRCGHTFCYNCG 475
M C+CG FC+ CG
Sbjct: 296 LMTCKCGQHFCWLCG 310
>AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein |
chr1:1779631-1784166 FORWARD LENGTH=594
Length = 594
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 10/196 (5%)
Query: 284 FICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEA 341
F C IC ++ T E ++ C H +C+ C Y+ + + + + +KCP C +
Sbjct: 172 FTCGICFDSYTLEEIVSVS-CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGR 230
Query: 342 EDCRAILPEEVFDRWGKAASEAMI-AESEKFYCPFANCSALLIDDGRVKVSQSECPDCRR 400
+ + +E +++ + + + E +CP C + G + C C
Sbjct: 231 DMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCL-CSH 289
Query: 401 LFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCM 460
FC C H V C K + + + M LA K CP CK + K+ GCM
Sbjct: 290 SFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKP---CPKCKRPIEKNHGCM 346
Query: 461 YMRCR--CGHTFCYNC 474
+M C C FC+ C
Sbjct: 347 HMTCTPPCKFEFCWLC 362
>AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily
protein | chr1:1779631-1784166 FORWARD LENGTH=552
Length = 552
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 10/196 (5%)
Query: 284 FICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEA 341
F C IC ++ T E ++ C H +C+ C Y+ + + + + +KCP C +
Sbjct: 130 FTCGICFDSYTLEEIVSVS-CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGR 188
Query: 342 EDCRAILPEEVFDRWGKAASEAMI-AESEKFYCPFANCSALLIDDGRVKVSQSECPDCRR 400
+ + +E +++ + + + E +CP C + G + C C
Sbjct: 189 DMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCL-CSH 247
Query: 401 LFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSEGCM 460
FC C H V C K + + + M LA K CP CK + K+ GCM
Sbjct: 248 SFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKP---CPKCKRPIEKNHGCM 304
Query: 461 YMRCR--CGHTFCYNC 474
+M C C FC+ C
Sbjct: 305 HMTCTPPCKFEFCWLC 320
>AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing protein
| chr2:13416991-13421170 REVERSE LENGTH=562
Length = 562
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 279 SNAAPFICEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCS 336
S+ + C IC ++ E C H +C+ C Y+ + + + + ++CP C
Sbjct: 130 SDDSELTCGICFDSYPP-EKIASVSCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCL 188
Query: 337 GLLEAEDCRAILPEEVFDRWGKAASEAMIAESEKF-YCPFANCS---ALLIDDGRVKVSQ 392
+ + + E+ +++ + + I ++ K +CP C + G VS
Sbjct: 189 AAVGHDMVDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDFAIDFVAGSGNYDVS- 247
Query: 393 SECPDCRRLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLY 452
C C FC C H V C K + + + M LA K CP CK
Sbjct: 248 --CL-CSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANSKP---CPRCKRP 301
Query: 453 VAKSEGCMYMRCR--CGHTFCYNC 474
+ K++GCM+M C C + FC+ C
Sbjct: 302 IEKNQGCMHMTCTPPCKYEFCWLC 325
>AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing protein
| chr1:24301165-24306159 REVERSE LENGTH=567
Length = 567
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 286 CEICTETKTAWESFGITGCSHAYCSDCVAMYVRSKVEENV--INIKCPVSGCSGLLEAED 343
C IC ET + + C H +C C Y+ + + + + ++CP C + +
Sbjct: 128 CGICFETFLS-DKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDM 186
Query: 344 CRAILPEEVFDRWGKAASEAMIAESEKF-YCPFANCSA---LLIDDGRVKVSQSECPDCR 399
+ P++ ++ + + ++ K +CP C ++ G V +CR
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFVVGSGNYDV------NCR 240
Query: 400 --RLFCAQCKVPWHAGVTCVEYQKLGKDDRGKEDLMLIKLAKDKKWRRCPNCKLYVAKSE 457
FC C H V C K + + + M LA K CP CK + K++
Sbjct: 241 CCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANSKP---CPKCKRPIEKNQ 297
Query: 458 GCMYMRCR--CGHTFCYNC 474
GCM++ C C FC+ C
Sbjct: 298 GCMHITCTPPCKFEFCWLC 316