Miyakogusa Predicted Gene
- Lj0g3v0287829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0287829.1 tr|G7KNR1|G7KNR1_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_6g025090 PE=4 SV=1,36.89,0.093,seg,NULL;
F-box domain,F-box domain, cyclin-like; RNI-like,NULL; FAMILY NOT
NAMED,NULL; no descripti,CUFF.19234.1
(387 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 74 2e-13
AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 65 7e-11
AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 63 4e-10
AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 61 1e-09
AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 7e-09
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 6e-08
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-07
AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 52 5e-07
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 52 5e-07
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 6e-07
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 7e-07
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-06
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 2e-06
AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT2G39415.1 | Symbols: | F-box family protein | chr2:16458607-1... 50 3e-06
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 49 5e-06
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-06
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 6e-06
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 6e-06
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 49 8e-06
AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 9e-06
AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 9e-06
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 9e-06
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 136/319 (42%), Gaps = 36/319 (11%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXX-------XXXX 78
D +S+LP+ I H+LSFL K A T VLS +W+ L+ + N
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 79 XXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIK 138
F F+ R+L L+ G+ L + VEP + + + + L L V + +
Sbjct: 68 SSFMDFVDRVLALQ-GNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETE 126
Query: 139 H-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWENHH 197
FP + SKTL LKL ++P ++ + +Y LP L +L++ + F +
Sbjct: 127 FVFPSEMFLSKTLVRLKLMLYPLLEF----------EDVY-LPKLKTLYIDSCYFEKYGI 175
Query: 198 GIAEPFSAFIKLNSLIIEN---CSLSEAHCTLSISSRTLCHLTVFNQYR--LLHKTELSS 252
G+ + S L L++++ C+ A S+S TL LT Q R + +
Sbjct: 176 GLTKLLSGCPILEDLVLDDIPWCTWDFA----SVSVPTLKRLTFSTQVRDEFPKSVSIDT 231
Query: 253 PSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDREMLMWANYPQPPFILLSWL 312
P+L F T K N SL + HI++ Q E M N ++
Sbjct: 232 PNLVYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATD-------FI 284
Query: 313 LKLPNIKLLTFSACTLQAL 331
+++ N+K L S+ TLQ L
Sbjct: 285 MRICNVKTLYLSSNTLQVL 303
>AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18151665-18153164
FORWARD LENGTH=438
Length = 438
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 24 NEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXX-XXXXXXXXFT 82
DR+S LPD +L H+L +L ++ +++T VLS+RW+ LW ++ F
Sbjct: 2 GRDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFE 61
Query: 83 KFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKY---AVSHNIQQLRLSV-RC--- 135
M + L + G + L++E + +L+ R + + V IQ L ++ C
Sbjct: 62 SLMDKFLEVNRGRLQNFKLNYESNLY---YLMDRFVPWIATVVDRGIQHLDVTATDCPPW 118
Query: 136 DIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWEN 195
I P I SKTL SLKL ++ + + PK + +LP L +HL +
Sbjct: 119 TIDFMPANICKSKTLVSLKL-VNVGLDT---------PKFVVSLPCLKIMHLEDIF---- 164
Query: 196 HHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQ----YRLLHK---- 247
+S I N +I C + E + L L V +Q +RL
Sbjct: 165 -------YSPLIAEN--LISGCPVLEDLTIVRNHEDFLNFLRVMSQTLKNFRLTFDWGMG 215
Query: 248 -----TELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHIN 282
E+ +P L+ +F + ++ NLSSL ++ ++
Sbjct: 216 SNDFSVEIDAPGLKYMSFRDSQSDRIVVKNLSSLVKIDLD 255
>AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536906-7537853
REVERSE LENGTH=315
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 37/290 (12%)
Query: 21 KSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXX 80
+ EDR+S+LPD +L +LS L + AV T +LSTRWKDLW
Sbjct: 8 RRSGEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATT 67
Query: 81 FTKFMSRLL-TLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCD--I 137
F F +R L + +D + + F+ E V+ + ++ AV IQ L + R D I
Sbjct: 68 FISFATRFLDSFKDSCLHKLQISFQMEA-VDMWTIIPWIEDAVKRRIQHLEVDSRIDHMI 126
Query: 138 KHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWENHH 197
P + S++L SL+L + L +LP L +HL EN +
Sbjct: 127 DTLPLTVYLSESLVSLRLHL-----------VMLHRFVFVSLPNLKVMHLE-----ENIY 170
Query: 198 GIAEPFSAFIK----LNSLIIENCSLSEAHCTLSISSRTLCHLTV--------FNQYRLL 245
AE FI L L + L +SS++L L + +N
Sbjct: 171 SYAETMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDD 230
Query: 246 HKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHI----NVAN-WSLEQ 290
K + +P L + + +NL S + I NV++ W LE+
Sbjct: 231 WKVVIDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEE 280
>AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536328-7537853
REVERSE LENGTH=450
Length = 450
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 37/290 (12%)
Query: 21 KSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXX 80
+ EDR+S+LPD +L +LS L + AV T +LSTRWKDLW
Sbjct: 8 RRSGEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATT 67
Query: 81 FTKFMSRLL-TLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCD--I 137
F F +R L + +D + + F+ E V+ + ++ AV IQ L + R D I
Sbjct: 68 FISFATRFLDSFKDSCLHKLQISFQMEA-VDMWTIIPWIEDAVKRRIQHLEVDSRIDHMI 126
Query: 138 KHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWENHH 197
P + S++L SL+L + L +LP L +HL EN +
Sbjct: 127 DTLPLTVYLSESLVSLRLHL-----------VMLHRFVFVSLPNLKVMHL-----EENIY 170
Query: 198 GIAEPFSAFIK----LNSLIIENCSLSEAHCTLSISSRTLCHLTV--------FNQYRLL 245
AE FI L L + L +SS++L L + +N
Sbjct: 171 SYAETMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDD 230
Query: 246 HKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHI----NVAN-WSLEQ 290
K + +P L + + +NL S + I NV++ W LE+
Sbjct: 231 WKVVIDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKVSFNVSDIWDLEE 280
>AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21778381-21780014 REVERSE LENGTH=482
Length = 482
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 135/344 (39%), Gaps = 55/344 (15%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKR-----------LHNXXXXXXX 74
DR+SNLPD + H+LSFL K+ T VLS W +LWK LH
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAER 61
Query: 75 XXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRL--- 131
F F+ R+L L+D S + + + P + R + + + L L
Sbjct: 62 LEIRQSFVDFVDRVLALQDDS-PIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFID 120
Query: 132 ----SVRCDIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHL 187
+ D P + SKTL LK+ V C K T +LP L SL++
Sbjct: 121 FSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGT-------SLPMLKSLYI 173
Query: 188 -VNFAFWENHHGIAEPF-SAFIKLNSLIIENCSLSEAHCTLSISS-RTLCHL-TVFNQYR 243
+ W G + F S+F L L + + E+H T+S +S R L L T Y
Sbjct: 174 DSDLILW----GKMKRFLSSFPVLEELRMASMEWKESHETVSSASLRKLSILGTGCEDYV 229
Query: 244 LLHKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINV------------ANWSLEQE 291
+PSL + + N+ L + IN+ N L Q+
Sbjct: 230 NPKSISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLIVKDDQIKRVREPNNDLLQD 289
Query: 292 DRE--MLMWANYPQPPFILLSWLLKLPNIKLLTFSACTLQALFL 333
D +L + N ++ + + NI++L +A TL+ L L
Sbjct: 290 DAGNVVLQFGN-------VVKLMNGIQNIQILYLTADTLEVLSL 326
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXX------- 74
S + D +S+LPD I H+LSFL K A T VLS +W+ L+ + N
Sbjct: 4 SGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENE 63
Query: 75 XXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVR 134
F F+ R+L L+ G+ L + ++P + + + + L L +
Sbjct: 64 TEISTSFMDFVDRVLALQ-GNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLN 122
Query: 135 CDIKH-FPHCIISSKTLTSLKL--AIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFA 191
+ + P + KTL LKL ++P + +LP L +L++
Sbjct: 123 LESEFLLPSQVYLCKTLVWLKLRFGLYPTIDV-----------EDVHLPKLKTLYIEATH 171
Query: 192 FWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYR--LLHKTE 249
F E+ G+ + S L L++++ S S+S TL L Q R
Sbjct: 172 FEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFA-SVSVPTLKRLRFSWQERDEFPKSVL 230
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHIN-------VANWSLEQEDREMLMWANYP 302
L +P+L F T K NL SL + HI+ + N+ + +M+ A
Sbjct: 231 LDTPNLVYLKFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT-- 288
Query: 303 QPPFILLSWLLKLPNIKLLTFSACTLQAL 331
+++++ N+K L SA TLQ L
Sbjct: 289 -------DFIMRICNVKTLYLSANTLQVL 310
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXX------- 74
S + D +S+LPD I H+LSFL K A T VLS +W+ L+ + N
Sbjct: 4 SGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENE 63
Query: 75 XXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVR 134
F F+ R+L L+ G+ L + ++P + + + + L L +
Sbjct: 64 TEISTSFMDFVDRVLALQ-GNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLN 122
Query: 135 CDIKH-FPHCIISSKTLTSLKL--AIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFA 191
+ + P + KTL LKL ++P + +LP L +L++
Sbjct: 123 LESEFLLPSQVYLCKTLVWLKLRFGLYPTIDV-----------EDVHLPKLKTLYIEATH 171
Query: 192 FWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYR--LLHKTE 249
F E+ G+ + S L L++++ S S+S TL L Q R
Sbjct: 172 FEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFA-SVSVPTLKRLRFSWQERDEFPKSVL 230
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHIN-------VANWSLEQEDREMLMWANYP 302
L +P+L F T K NL SL + HI+ + N+ + +M+ A
Sbjct: 231 LDTPNLVYLKFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT-- 288
Query: 303 QPPFILLSWLLKLPNIKLLTFSACTLQAL 331
+++++ N+K L SA TLQ L
Sbjct: 289 -------DFIMRICNVKTLYLSANTLQVL 310
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 33/275 (12%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHN---------XXXXXXXXX 76
DR+S+LP+ ++ H+LSFL K A T VLS +W+ L+ + N
Sbjct: 7 DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVE 66
Query: 77 XXXXFTKFMSRLLTLRDGSIALQNLDFEREGF-VEPHLLKRIMKY---AVSHNIQQLRLS 132
F +F+ R+L L+ G+ ++ E + V+ L R+ + + + +L LS
Sbjct: 67 LSRSFMEFVDRVLALQ-GNGSVNKFSLECSNYDVD---LARVTGWILNVLGRGVSELDLS 122
Query: 133 VRCDIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFA 191
+ +++ P I SKTL LKL + +K PK L +L++
Sbjct: 123 I---LEYPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPK-------LKTLYIDCVD 172
Query: 192 FWENHHGIAEPFSAFIKLNSLIIENCSLSE-AHCTLSISSRTLCHLTVFNQ--YRLLHKT 248
E G + S L L++ N C++S+ +TL LT F + Y
Sbjct: 173 VQERGFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSV--KTLKRLTFFCEETYENPKSV 230
Query: 249 ELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINV 283
+P+L + K N +SL + HI +
Sbjct: 231 SFDTPNLVYLEYSDAIASKYPKVNFNSLVEAHIGL 265
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 141/339 (41%), Gaps = 42/339 (12%)
Query: 15 KRGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXX 74
KR R S D +SNLP+ +L +L +L K V++ VLS+RW++LWK +
Sbjct: 7 KRVRAKGSREVDWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCD 66
Query: 75 XXXXXXFTKFMSRLLTLRDGSIALQN--------LDFEREGFVEPH--LLKRIMKYAVSH 124
F+ + L D + + L+++ G+ EP L++R + VS
Sbjct: 67 FHVRNTFSYDHNTFLRFVDSFMGFNSQSCLQSFRLEYDSSGYGEPKLALIRRWINSVVSR 126
Query: 125 NIQQLR-LSVRCDIKHF--PHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPA 181
++ L L CD F P + + +TL L L +L +LP+
Sbjct: 127 KVKYLGVLDDSCDNYEFEMPPTLYTCETLVYLTL-----------DGLSLASPKFVSLPS 175
Query: 182 LTSLHL--VNFAFWENHHGIAEPFSAFIKLNSLIIEN--CSLSEAHCTLSISSRTLCHLT 237
L LHL V FA +H + S L +L I C E C S S + H
Sbjct: 176 LKELHLSIVKFA---DHMALETLISQCPVLENLNINRSFCDDFEFTCVRSQSLLSFTH-- 230
Query: 238 VFNQYRLLHK---TELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHIN-VANWSLEQEDR 293
V + +L++ + +P L+ ++L+SL + I+ V N ++
Sbjct: 231 VADTDEMLNEDLVVAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVFNLICKK--- 287
Query: 294 EMLMWANYPQPPFILLSWLLKLPNIKLLTFSACTLQALF 332
+ N ++ +L+ + +IK L ++ TL+ ++
Sbjct: 288 --MFNPNDLNKRNMIRDFLVGISSIKTLIIASSTLEVIY 324
>AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18160600-18162058
FORWARD LENGTH=435
Length = 435
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 24 NEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW---KRLHNXXXXXXXXXXXXX 80
+ D +S LPD +L +L L+ K +V+T VLS RW++LW L
Sbjct: 2 DRDYISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLELFTLQFTYPDREEI 61
Query: 81 FTKFMSRLLT------LRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSV- 133
F +FM R + L+ I + R+ +E ++ V H +Q L + +
Sbjct: 62 FVRFMDRFMEFKCRSRLKKFMITYVDCKGYRDRLME------LIGTLVDHGLQHLYVFMH 115
Query: 134 ---RCDIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNF 190
R D K I SKTL SLKL + ++K+ + + +LP L L L N
Sbjct: 116 TFDRVDFKR--QNIYKSKTLVSLKLH-NVELKNSDF---------VVSLPCLKILKLENI 163
Query: 191 AFWENHHGIAEPFSAFIKLNSLIIENCSLSE--------------AHCTLSISSRTL--- 233
E+ + E +I CS+ E L +SS+TL
Sbjct: 164 CHGEDGPLVVEK----------LISGCSVLEDLELIRPFDIRTHKVLLLLRVSSQTLKSF 213
Query: 234 -CHLTVFNQYRLLHKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQED 292
H ++ R E+ +P L+ E + + NLSSL + I L ED
Sbjct: 214 TLHFAIYKD-RTDFSVEIDAPRLKYMTVEQSQSDSIVVKNLSSLFSIDIGTKFNPLRHED 272
Query: 293 REM 295
M
Sbjct: 273 LRM 275
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 23 ENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW-----KRLHNXXXXXXXXXX 77
E D +S PDC+L +L L K +V+T VLS RW++LW RL
Sbjct: 2 EEFDYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFPYPY 61
Query: 78 XXXFTKFMSRLLTLRDGSIALQNL---DFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVR 134
F +FM R + + S LQ FE G+ + L ++ V IQ L + +
Sbjct: 62 EEGFVRFMDRFMEFKCRS-RLQKFMITYFEHNGYRD--RLMELIGTLVDRGIQHLYVYMH 118
Query: 135 -CD-IKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
C+ + I SKTL SLKL Y + P+ + +LP L L L N
Sbjct: 119 TCNRVDFIRQNIYKSKTLVSLKL----------YNVELKNPEFVVSLPCLKILKLENIFH 168
Query: 193 WENHHGIAE 201
E+ + E
Sbjct: 169 GEDGPLVVE 177
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 21/252 (8%)
Query: 18 RHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXX-XXXXXXX 76
R+ NEDR+S+LP+ +LL +LS L VK V T VLS W+ LWK +
Sbjct: 6 RNGNGVNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQS 65
Query: 77 XXXXFTKFMSRLLTLRDGSIALQNLDFE-REGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
+++ + RLL L + + L++L R G + + A + +++ L L V
Sbjct: 66 EDETYSEIVCRLL-LSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVE- 123
Query: 136 DIKH---FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
+K FP + + +TL SL L V P P L +L L L V++ +
Sbjct: 124 SVKGSFIFPTGLYNCETLESLTLRSWVLVDVPS-------PACLKSLRTL-RLENVDYKY 175
Query: 193 WENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVF--NQYRLLHKTEL 250
++ + + S L +L++ +L E T +I+ +L LT++ N +
Sbjct: 176 DDSVYNL---LSGCPNLENLVVYRGNLLEVE-TFTIAVPSLQRLTIYDDNDGEYCTGYVI 231
Query: 251 SSPSLRTFAFEG 262
++PSL+ +G
Sbjct: 232 NAPSLKYLKIDG 243
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 16 RGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW 62
+GR S EDR+S LP+ +L H+LSFL+ K +V+T VLS+RW+DLW
Sbjct: 2 QGRVRGS-GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLW 47
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 16 RGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW 62
+GR S EDR+S LP+ +L H+LSFL+ K +V+T VLS+RW+DLW
Sbjct: 2 QGRVRGS-GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLW 47
>AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18218858-18221877 FORWARD LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 36/338 (10%)
Query: 8 MLISPKAKRGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHN 67
M I K H+K +D +S+LP+ ++ H+LSFL ++ + T VLS +W+ L+ N
Sbjct: 1 MDICCKDIISDHSK---KDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPN 57
Query: 68 XXXXXXXXX-------XXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKY 120
F F+ R+L+L+ G + F +P + R +
Sbjct: 58 LEFDDAVVYLNPDGERNETIFENFVDRVLSLQ-GDYPINKFSLTCRDFTDPTCVSRWISN 116
Query: 121 AVSHNIQQLRLSVRC----DIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSL 176
+ + L L RC D P I SK L L++ + +F
Sbjct: 117 VMERGVSDLDL--RCIVYWDNGTMPPDIFVSKALVHLRIETG---NGAFIDVEDVF---- 167
Query: 177 YNLPALTSLHLVNFAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHL 236
LP L +L+L + +G + ++ L L I N + + S+SS+TL L
Sbjct: 168 --LPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDLFIMNICW-DGYLKRSLSSKTLKRL 224
Query: 237 TVFNQYRLLHKTE---LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDR 293
T F + E +P+L F + K N SL I + S ++
Sbjct: 225 TFFCEDVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDSLVYASICLQMTSHQR--- 281
Query: 294 EMLMWANYPQPPFILLSWLLKLPNIKLLTFSACTLQAL 331
A+Y +LL + N+++L A T++ L
Sbjct: 282 ---THASYEHLVGNATDFLLGISNVQILELFANTIEVL 316
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 21/232 (9%)
Query: 13 KAKRGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXX 72
+ K R S+ D +S LPDC+L +L L K V+T VLS RW++LWK +
Sbjct: 5 REKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDN 64
Query: 73 XXXXXXXXFTKFMSRLLTLRDGSIALQNL----DFEREGFVEPHLLKRIMKYAVSHNIQQ 128
F F+ L S LQ D + E + L+ R + V+ +Q
Sbjct: 65 TDFQEFNTFLSFVDSFLDFNSESF-LQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQH 123
Query: 129 LRL---SVRCDIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSL 185
+ + S P I + ++L SLKL TL +LP+L +
Sbjct: 124 IDVLDDSYGSWEVQLPSSIYTCESLVSLKLC-----------GLTLASPEFVSLPSLKVM 172
Query: 186 HLVNFAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLT 237
L+ F ++ G+ + L SL IE E L + S++L T
Sbjct: 173 DLIITKFADD-MGLETLITKCPVLESLTIERSFCDEIE-VLRVRSQSLLRFT 222
>AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7545653-7547307
REVERSE LENGTH=437
Length = 437
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 22/190 (11%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXF 81
S DR+S+LPD +L +LS L K AV T +LSTRW+ +W F
Sbjct: 2 SNRGDRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTF 61
Query: 82 TKFMSRLLTL-RDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIKHF 140
F SR L +D + L ER+ V+ + ++ AV+ IQ L + R HF
Sbjct: 62 VSFASRFLEFSKDSCLHKFKLSVERDD-VDMCTIMPWIQDAVNRRIQHLEVDCRFSF-HF 119
Query: 141 PHCIIS---SKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWENHH 197
++ S+TL SL+L TL +LP L +HL EN +
Sbjct: 120 EAVYLTLYLSETLVSLRLHF-----------VTLHRYEFVSLPNLKVMHL-----EENIY 163
Query: 198 GIAEPFSAFI 207
E FI
Sbjct: 164 YCLETLENFI 173
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 112/278 (40%), Gaps = 17/278 (6%)
Query: 8 MLISPKAKRGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHN 67
M+ + +G SE E+RLS LPD ++ +LS L K AV+T +LSTRW++LW+ +
Sbjct: 1 MVKTEICGKGSSQGSE-EERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPV 59
Query: 68 XXXXXXXXXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQ 127
F F L S +Q L + L + H IQ
Sbjct: 60 LDFDSRELRSFSEFVSFAGSFFYLHKDS-YIQKLRVCIYDLAGNYYLTSWIDLVTRHRIQ 118
Query: 128 QLRLSV-RC-DIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSL 185
+ +SV C P + + TL LKL+ + T+ +LP L L
Sbjct: 119 HIDISVFTCSGFGVIPLSLYTCDTLVHLKLS-----------RVTMVNVEFVSLPCLKIL 167
Query: 186 HLVNFAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYRLL 245
L +F + N + + S L L I S + + S+TL + + ++
Sbjct: 168 DL-DFVNFTNETTLDKIISCSPVLEELTIVKSSEDNVK-IIQVRSQTLKRVEIHRRFDRH 225
Query: 246 HKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINV 283
+ + +P L+ + + + + NL +V I+V
Sbjct: 226 NGLVIDTPLLQFLSIKAHSIKSIEFINLGFTTKVDIDV 263
>AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 130/329 (39%), Gaps = 38/329 (11%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXX---------XXXXXX 75
+D ++ LPD +L +LS L K A T +LS RW+ L+ + N
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQD 65
Query: 76 XXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F F+ R+L LR G + + +E + + + H + L L V
Sbjct: 66 QDQTSFIDFVDRVLKLR-GKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSP 124
Query: 136 DIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWE 194
+ + P + +SKTL LK I PK P K + + LP L +L+L + F E
Sbjct: 125 SLVYWLPSKVFASKTLVRLK--IGPK-DGPRVKLRNVC------LPKLKTLNLDSVVFEE 175
Query: 195 NHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQY--RLLHKTELSS 252
G A+ S L L + N + + S+SS+ L LT++ + R +
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWD-SCSVSSKILKRLTLYCAHSSRNPKSVSFDT 234
Query: 253 PSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQE--------DREMLMWANYPQP 304
P++ F + K N SL + I + +++ D E M N
Sbjct: 235 PNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATD- 293
Query: 305 PFILLSWLLKLPNIKLLTFSACTLQALFL 333
L+ + N+K L S TL+ L L
Sbjct: 294 ------LLMGICNVKTLYLSYDTLETLNL 316
>AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 130/329 (39%), Gaps = 38/329 (11%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXX---------XXXXXX 75
+D ++ LPD +L +LS L K A T +LS RW+ L+ + N
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQD 65
Query: 76 XXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F F+ R+L LR G + + +E + + + H + L L V
Sbjct: 66 QDQTSFIDFVDRVLKLR-GKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSP 124
Query: 136 DIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWE 194
+ + P + +SKTL LK I PK P K + + LP L +L+L + F E
Sbjct: 125 SLVYWLPSKVFASKTLVRLK--IGPK-DGPRVKLRNVC------LPKLKTLNLDSVVFEE 175
Query: 195 NHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQY--RLLHKTELSS 252
G A+ S L L + N + + S+SS+ L LT++ + R +
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWD-SCSVSSKILKRLTLYCAHSSRNPKSVSFDT 234
Query: 253 PSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQE--------DREMLMWANYPQP 304
P++ F + K N SL + I + +++ D E M N
Sbjct: 235 PNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATD- 293
Query: 305 PFILLSWLLKLPNIKLLTFSACTLQALFL 333
L+ + N+K L S TL+ L L
Sbjct: 294 ------LLMGICNVKTLYLSYDTLETLNL 316
>AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 130/329 (39%), Gaps = 38/329 (11%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXX---------XXXXXX 75
+D ++ LPD +L +LS L K A T +LS RW+ L+ + N
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQD 65
Query: 76 XXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F F+ R+L LR G + + +E + + + H + L L V
Sbjct: 66 QDQTSFIDFVDRVLKLR-GKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSP 124
Query: 136 DIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWE 194
+ + P + +SKTL LK I PK P K + + LP L +L+L + F E
Sbjct: 125 SLVYWLPSKVFASKTLVRLK--IGPK-DGPRVKLRNVC------LPKLKTLNLDSVVFEE 175
Query: 195 NHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQY--RLLHKTELSS 252
G A+ S L L + N + + S+SS+ L LT++ + R +
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWD-SCSVSSKILKRLTLYCAHSSRNPKSVSFDT 234
Query: 253 PSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQE--------DREMLMWANYPQP 304
P++ F + K N SL + I + +++ D E M N
Sbjct: 235 PNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATD- 293
Query: 305 PFILLSWLLKLPNIKLLTFSACTLQALFL 333
L+ + N+K L S TL+ L L
Sbjct: 294 ------LLMGICNVKTLYLSYDTLETLNL 316
>AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 130/329 (39%), Gaps = 38/329 (11%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXX---------XXXXXX 75
+D ++ LPD +L +LS L K A T +LS RW+ L+ + N
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQD 65
Query: 76 XXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F F+ R+L LR G + + +E + + + H + L L V
Sbjct: 66 QDQTSFIDFVDRVLKLR-GKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSP 124
Query: 136 DIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWE 194
+ + P + +SKTL LK I PK P K + + LP L +L+L + F E
Sbjct: 125 SLVYWLPSKVFASKTLVRLK--IGPK-DGPRVKLRNVC------LPKLKTLNLDSVVFEE 175
Query: 195 NHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQY--RLLHKTELSS 252
G A+ S L L + N + + S+SS+ L LT++ + R +
Sbjct: 176 GKIGFAKLLSGCPVLEELSLLNLAWDRWD-SCSVSSKILKRLTLYCAHSSRNPKSVSFDT 234
Query: 253 PSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQE--------DREMLMWANYPQP 304
P++ F + K N SL + I + +++ D E M N
Sbjct: 235 PNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATD- 293
Query: 305 PFILLSWLLKLPNIKLLTFSACTLQALFL 333
L+ + N+K L S TL+ L L
Sbjct: 294 ------LLMGICNVKTLYLSYDTLETLNL 316
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 44/329 (13%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXX---- 80
+D +S LPD +L +LS + K AV T VLS RWK+++ + N
Sbjct: 4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRI 63
Query: 81 -----FTKFMSRLLTLRDGSIALQNLDFER----EGFVEPHLLKRIMKYAVSHNIQQLRL 131
+ F+ +LL + GS +++ L + G + ++ + + H + L +
Sbjct: 64 EIHRNYMAFVDKLLDTQRGS-SIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV 122
Query: 132 SVRCDIKH--FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVN 189
+ K P I SKTL L++ + T+ +LP L +L L +
Sbjct: 123 FITLKGKSPPVPAMIFKSKTLVKLRVG----------RGFTIKLSQDVSLPLLRTLCLDS 172
Query: 190 FAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHC---TLSISSRTLCHLTV-FNQYRLL 245
F H+ + S L L++E E C T S+SS +L L + F+ R
Sbjct: 173 VNFVGGHNVVGTLISRCPVLEELVVE-----ERRCVDWTCSVSSPSLKRLHIRFD--RKF 225
Query: 246 HKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDREMLMWAN--YPQ 303
L +P+L + G K L SL + +N L ++ M+ N
Sbjct: 226 TSISLDAPNLIYYKHSGYVLGKYPNVKLDSLIEARLN-----LRMDETRMVGVRNGSLGS 280
Query: 304 PPFILLSWLLKLPNIKLLTFSACTLQALF 332
P + + + + N+++L S+ TL+ L+
Sbjct: 281 IPADMRNLINGIRNVRILHLSSHTLELLY 309
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 135/329 (41%), Gaps = 44/329 (13%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXX---- 80
+D +S LPD +L +LS + K AV T VLS RWK+++ + N
Sbjct: 4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRI 63
Query: 81 -----FTKFMSRLLTLRDGSIALQNLDFER----EGFVEPHLLKRIMKYAVSHNIQQLRL 131
+ F+ +LL + GS +++ L + G + ++ + + H + L +
Sbjct: 64 EIHRNYMAFVDKLLDTQRGS-SIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV 122
Query: 132 SVRCDIKH--FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVN 189
+ K P I SKTL L++ + T+ +LP L +L L +
Sbjct: 123 FITLKGKSPPVPAMIFKSKTLVKLRVG----------RGFTIKLSQDVSLPLLRTLCLDS 172
Query: 190 FAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHC---TLSISSRTLCHLTV-FNQYRLL 245
F H+ + S L L++E E C T S+SS +L L + F+ R
Sbjct: 173 VNFVGGHNVVGTLISRCPVLEELVVE-----ERRCVDWTCSVSSPSLKRLHIRFD--RKF 225
Query: 246 HKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDREMLMWAN--YPQ 303
L +P+L + G K L SL + +N L ++ M+ N
Sbjct: 226 TSISLDAPNLIYYKHSGYVLGKYPNVKLDSLIEARLN-----LRMDETRMVGVRNGSLGS 280
Query: 304 PPFILLSWLLKLPNIKLLTFSACTLQALF 332
P + + + + N+++L S+ TL+ L+
Sbjct: 281 IPADMRNLINGIRNVRILHLSSHTLELLY 309
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKF 84
ED +S LPD ++ +L +L+ K AV T VLS RW+ LW F F
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDYNAFVSF 81
Query: 85 MSRLLTL-RDGSIALQNLDFE-REGFVEPHLLKRIMKYAVSHNIQQLRLSV---RCD-IK 138
+ + L R+ + L L R+G + + R + + + ++ L + + RC+ +
Sbjct: 82 VDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHLDVEIGPTRCECFE 141
Query: 139 HFPHCIISSKTLTSLK-----LAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFW 193
P + S ++L L+ L V PC K +L N L SL +
Sbjct: 142 VIPLSLYSCESLLYLRLNHVCLGKFESVSLPCLKTMSLEQNIYANEADLESL-ISTCPVL 200
Query: 194 ENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFN--QYRLLHKTE-- 249
E+ ++ A+ K+N L + S+TL L + +Y L K+E
Sbjct: 201 EDLSFVS---GAYDKVN--------------VLRVQSQTLTSLNIEGCVEYLDLDKSEVL 243
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHI 281
+ + L+ E Y+ T N SL +V++
Sbjct: 244 IDATRLKYLNLEADQYESKTIRNSGSLTKVNL 275
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKF 84
ED +S LPD ++ +L +L+ K AV T VLS RW+ LW F F
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDYNAFVSF 81
Query: 85 MSRLLTL-RDGSIALQNLDFE-REGFVEPHLLKRIMKYAVSHNIQQLRLSV---RCD-IK 138
+ + L R+ + L L R+G + + R + + + ++ L + + RC+ +
Sbjct: 82 VDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHLDVEIGPTRCECFE 141
Query: 139 HFPHCIISSKTLTSLK-----LAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFW 193
P + S ++L L+ L V PC K +L N L SL +
Sbjct: 142 VIPLSLYSCESLLYLRLNHVCLGKFESVSLPCLKTMSLEQNIYANEADLESL-ISTCPVL 200
Query: 194 ENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFN--QYRLLHKTE-- 249
E+ ++ A+ K+N L + S+TL L + +Y L K+E
Sbjct: 201 EDLSFVS---GAYDKVN--------------VLRVQSQTLTSLNIEGCVEYLDLDKSEVL 243
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHI 281
+ + L+ E Y+ T N SL +V++
Sbjct: 244 IDATRLKYLNLEADQYESKTIRNSGSLTKVNL 275
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 34/282 (12%)
Query: 15 KRGRHNKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXX 74
KR R ++ EDRLSNLP+ ++ ++ + K V++ VLS RW++LW+ +
Sbjct: 8 KRARRSE---EDRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEYNQ 64
Query: 75 XXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVR 134
F F+ R L L D Q+ + E + + ++ Q+L++
Sbjct: 65 FLDYNAFVSFVDRFLAL-DRESCFQSFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDV 123
Query: 135 CDIK------HFPHCIISSKTLTSLKLA----IHPKVKSPCYKKQTLFPKSLYNLPALTS 184
D P + + ++L SLKL +PKV S P L +
Sbjct: 124 LDYTWGNEEVQIPPSVYTCESLVSLKLCNVILPNPKVIS--------LP-----LVKVIE 170
Query: 185 LHLVNFAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLC---HLTVFNQ 241
L +V F+ N + + S+ L SLII S+ + + L +SSR+L H+ +
Sbjct: 171 LDIVKFS---NALVLEKIISSCSALESLIISRSSVDDIN-VLRVSSRSLLSFKHIGNCSD 226
Query: 242 YRLLHKTELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINV 283
+ + +P L K N SL + IN+
Sbjct: 227 GWDELEVAIDAPKLEYLNISDHSTAKFKMKNSGSLVEAKINI 268
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKFM 85
D ++ LPD +L+ +LSF+ AV TCVLS RW+ LW L N
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVSPWDSRPGIVDFIN 61
Query: 86 SRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLS 132
+L R I + ++P +KR ++ AVSH +++L++
Sbjct: 62 KKLPIHRAPVIERLCIHINSNPHIKPEYIKRWIEIAVSHYVRELQID 108
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKFM 85
DR+S LPD +L+ ++SF+ K AV T +LS RW+ LWK + F+
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPK----LECDCTEPALRDFI 57
Query: 86 SRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIKHF----- 140
+ L L+ I L F RE F+ +K A+SH +++LR+ H+
Sbjct: 58 LKNLPLQARIIESLYLRFRRESFLFQD-IKLWGGIAISHCLRELRIDF---FSHYANPYV 113
Query: 141 --PHCIISSKTLTSLKL 155
P + + K+L +LKL
Sbjct: 114 ILPRSLYTCKSLVTLKL 130
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRL 65
S NEDR+S+LPD +LL +LS L + A+ T VLS RW+ LW L
Sbjct: 9 SMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTML 52
>AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:21787146-21788807
REVERSE LENGTH=475
Length = 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKFM 85
DR+S+L + I+ +++SFL K A VLS RW++++ + N T F+
Sbjct: 2 DRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPN-LEFDNTLENQGSLTDFL 60
Query: 86 SRLLTLRDGSIALQNLDFEREGFVEPHL---LKRIMKYAVSHNIQQLRLS--VRCDIKH- 139
+ LL L S ++N+ +R G P+ L R + + + +L+L V D ++
Sbjct: 61 NGLLAL-PASTRIKNVSIKRRGRDGPNRDADLNRFLCNVLKRGVLKLKLDIWVTLDGRYS 119
Query: 140 FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFWENHHGI 199
P + + KTL L+L ++ L P++ LPAL +L +++ + + G
Sbjct: 120 LPVEVFTCKTLVELELGSILQID--------LVPENAL-LPALKTL-IIDAVQFSDQSGC 169
Query: 200 AEPFSAFIKLNSLIIE----NCSLSEAHCTLSISSRTLCHLTV------FNQYRLLHKTE 249
A F + +++E N + +SS TL LT+ N Y +
Sbjct: 170 A--FQKLLSSCPVLVELRMLNVQWEHWQWSRRVSSPTLEKLTMNHRYHFGNTYYDMEGIT 227
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVA 284
+PSL + + P + NL SL + I++
Sbjct: 228 FDTPSLTSLKYYDLPPKSYPTVNLDSLVEATISLT 262
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 23 ENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFT 82
ENEDR+S L + +L+H++S L K V T VLS RW+ +WK + N F+
Sbjct: 8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQN---LKFVSKYHQTFS 64
Query: 83 KFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSV 133
+ + R L L++LD E ++ L ++ A + +++ L L +
Sbjct: 65 EDVYRFFMLHKAPF-LESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDL 114
>AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21872729-21874422 FORWARD LENGTH=509
Length = 509
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRL-------HNXXXXXXXXXXX 78
D +SNLP+ +L +LS+L K A T +LS RW +L +
Sbjct: 47 DVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQRKN 106
Query: 79 XXFTKFMSRLLTLR-DGSIALQNLDFE-REGFVEPH-LLKRIMKYAVSHNIQQLRLSVRC 135
F F+ RLL+ R + S +Q + + R+G VEP ++K I+ + L L +
Sbjct: 107 VFFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDCVIKWILTTVRDLGVLDLSLCIDF 166
Query: 136 DIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHL 187
I H P + SKTL L++ ++ FP + + P L SL L
Sbjct: 167 GIFHLPFNVFRSKTLVKLRIGTMIRLSQ--------FPSDVVS-PTLNSLVL 209
>AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:4724681-4726314
FORWARD LENGTH=456
Length = 456
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLH----NXXXXXXXXXXXXXF 81
DR+S LP+ ++ +L L K +V+T VLSTRWK+LW + N
Sbjct: 10 DRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFPFQNNNEKLL 69
Query: 82 TKFMSRLLTLRDGSIALQ--NLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIKH 139
F+ R L + S LQ +D+ R+ ++ RI A+S I+ L + +
Sbjct: 70 IDFIDRFLQFNNES-RLQKFKVDYSRDKIIK--FSDRIGD-AISRGIRVLDVESNTYYRD 125
Query: 140 FPHCI------------ISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHL 187
CI S KTL SLKL+ + ++ P + +Y LP L +HL
Sbjct: 126 ADDCIDYPCIEFMPLNLYSCKTLVSLKLS-YSGLEDPGF---------VY-LPCLKFMHL 174
Query: 188 VNFAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTL--------SISSRTLCHLTV- 238
W++ S + L L + C + E L + SR+L ++
Sbjct: 175 REVR-WDS--------SGTMNLEKL-VSGCPVLEELIYLHDDKLVVTRVRSRSLKRFSIP 224
Query: 239 ----FNQYRLLHKT-ELSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVA-----NWSL 288
+ +R + +T E+ +P L + + + ++ NL+SL + +++ W
Sbjct: 225 FRHKLSLFRRVTQTFEIDAPGLEYMSLKADHFDRIVVKNLTSLFMIDLDIKFIVGFGWMF 284
Query: 289 EQED 292
+ ED
Sbjct: 285 DPED 288
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKFM 85
DR++ L D I+ H+LS L K A T VLS RW+ L+ N F F+
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 86 SRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQL--RLSVRCDIKHFPHC 143
R+L + G+ ++ + + ++ + R M + H + L + DI P
Sbjct: 62 DRVLVVT-GNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 144 IISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFW-ENHHGIAEP 202
I + KTL LKLA P Y +LP+L +L L + F + +
Sbjct: 121 IFTCKTLVELKLARGFYAMVPDY----------VSLPSLKTLFLSSIWFCNRDCCPLGRL 170
Query: 203 FSAFIKLNSL-IIENCSLSEAHCTLSISSRTLCHLTVFNQYRLLH-KTELSSPSLRTFAF 260
SA L L II C C ++SS TL LT+ + + + + +PSL +
Sbjct: 171 LSACPVLEELTIIGGCWQHIEFCR-TVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEY 229
Query: 261 EGTPYQKLTGSNLSSLEQVHI 281
+ NL SL + +
Sbjct: 230 SDLVPRHFPFVNLESLVEAKL 250
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 NEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFT- 82
+DR+S LPD +L+ +LSFL K V T V S +W+ LWK + N +T
Sbjct: 14 GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTF 73
Query: 83 --KFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIK-- 138
L+ + + L+FE E V+P + + A S ++++L L V D
Sbjct: 74 SEIVCKSFLSHKAPVLESFRLEFESEK-VDPVDIGLWVGIAFSRHLRELVL-VAADTGTG 131
Query: 139 ---HFPHCIISSKTLTSLKLA--IHPKVKSPCYKK 168
FP + + TL +L+L I + SP K
Sbjct: 132 TAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMK 166
>AT2G39415.1 | Symbols: | F-box family protein |
chr2:16458607-16458966 REVERSE LENGTH=119
Length = 119
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 20 NKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW 62
+ SEN D +S+LPD IL +LS L A++T VLSTRW+ +W
Sbjct: 32 DASENIDSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVW 74
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXFTKFM 85
DR++ L D I+ H+LS L K A T VLS RW+ L+ N F F+
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 86 SRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQL--RLSVRCDIKHFPHC 143
R+L + G+ ++ + + ++ + R M + H + L + DI P
Sbjct: 62 DRVLVVT-GNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 144 IISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFW-ENHHGIAEP 202
I + KTL LKLA P Y +LP+L +L L + F + +
Sbjct: 121 IFTCKTLVELKLARGFYAMVPDY----------VSLPSLKTLFLSSIWFCNRDCCPLGRL 170
Query: 203 FSAFIKLNSL-IIENCSLSEAHCTLSISSRTLCHLTVFNQYRLLH-KTELSSPSLRTFAF 260
SA L L II C C ++SS TL LT+ + + + + +PSL +
Sbjct: 171 LSACPVLEELTIIGGCWQHIEFCR-TVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEY 229
Query: 261 EGTPYQKLTGSNLSSLEQVHI 281
+ NL SL + +
Sbjct: 230 SDLVPRHFPFVNLESLVEAKL 250
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 21 KSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXX 80
K N DR+SNLPD +L +LS L K +V T VLS RW++LW +
Sbjct: 10 KQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDV 69
Query: 81 FTKFMSRLL 89
F F++R L
Sbjct: 70 FVSFVNRFL 78
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 26/275 (9%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW-----------KRLHNXXX 70
SE D S LPD ++ H+LS L K A T VL+ +W+ L+ LH
Sbjct: 3 SEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEG 62
Query: 71 XXXXXXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLR 130
F F+ R+L L+ G+ ++ + V+P + R + + + L
Sbjct: 63 KREKDGILRSFMDFVDRVLALQ-GASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLA 121
Query: 131 LSVRCDIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVN 189
L + + ++ P+ I SKTL LK + L+ ++ LP L +L L +
Sbjct: 122 LFMDFEEEYSLPYEISVSKTLVELKTGYGVDL--------YLWDDDMF-LPMLKTLVLES 172
Query: 190 FAFWENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYRLLHKTE 249
F P A L L++ N + + LS SS L +L + ++ L
Sbjct: 173 VEFGRGQFQTLLP--ACPVLEELMLLNMEWKDRNVILSSSS--LKNLKITSEDGCLGTLS 228
Query: 250 LSSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVA 284
+P+L + + NL +L +V IN+
Sbjct: 229 FDTPNLVFLDYYDYVAEDYPIVNLKNLVEVGINLV 263
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 12 PKAKRGRH----NKSENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW 62
P + GRH E D +S+LPD IL H+LSF+ K A+ T +LS RW+ +W
Sbjct: 13 PSHRYGRHYHRRKIKEAVDSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVW 67
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 22 SENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWK---------DLWKRLHN--XXX 70
S ++D +SNLPD +L H+LSFL A T VL+ RW+ DL +++
Sbjct: 8 SGSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMG 67
Query: 71 XXXXXXXXXXFTKFMSRLLTLRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLR 130
F F+ R++ L+ G+ L+ + +P + + + +++L
Sbjct: 68 RRKRLELRKSFKLFVDRVMALQ-GNAPLKKFSLRCKIGSDPSRVNGWVLKVLDRGVEELD 126
Query: 131 LSVRCDIKH-FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVN 189
L + + ++ P ++ +KTL SLK++ + + LP L +LHL
Sbjct: 127 LYIASEYEYPLPPKVLMTKTLVSLKVS---------GTDEFTIDVGEFFLPKLKTLHLSA 177
Query: 190 FAFWENHHGIAEPFSAFI 207
+F + PF+ I
Sbjct: 178 ISFGDEG---GPPFAKLI 192
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWK---------RLHNXXXXXXXXX 76
DRLS LPD LL +LS+L K + T +LS RW+ LW RLH+
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHD--------N 57
Query: 77 XXXXFTKFMSRLLTLRDG-SIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F++F+ R L L ++ N+ F + ++ V +++L +S C
Sbjct: 58 TCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSY-C 116
Query: 136 DIKH---FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
+ P C+ + TL LKL + CY +L +LHL++ +
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLENITLEDASCY----------VCFQSLKTLHLLDVKY 166
Query: 193 WENHHGIAEPFSAFIKLNSLIIENC 217
++ + S+ L L+++ C
Sbjct: 167 LDD-QSLPRIISSCSSLEDLVVQRC 190
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWK---------RLHNXXXXXXXXX 76
DRLS LPD LL +LS+L K + T +LS RW+ LW RLH+
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHD--------N 57
Query: 77 XXXXFTKFMSRLLTLRDG-SIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSVRC 135
F++F+ R L L ++ N+ F + ++ V +++L +S C
Sbjct: 58 TCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSY-C 116
Query: 136 DIKH---FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
+ P C+ + TL LKL + CY +L +LHL++ +
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLENITLEDASCY----------VCFQSLKTLHLLDVKY 166
Query: 193 WENHHGIAEPFSAFIKLNSLIIENC 217
++ + S+ L L+++ C
Sbjct: 167 LDD-QSLPRIISSCSSLEDLVVQRC 190
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD LENGTH=479
Length = 479
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 25 EDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRL 65
+DR+S LPD +L+ +L+ L + A++T VLSTRWK++WK++
Sbjct: 40 DDRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQV 80
>AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr2:17785653-17787211 FORWARD LENGTH=443
Length = 443
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 36/324 (11%)
Query: 26 DRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLW---KRLH-NXXXXXXXXXXXXXF 81
DR+S+LPD IL H+LSFL K A T LSTRWK+++ LH + F
Sbjct: 2 DRISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLDYARQHENPREFIDF 61
Query: 82 TKFMSRLLTLRDGS----IALQ-----NLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLS 132
F++ L + S +AL+ N + + V+ + + + + V+ L ++
Sbjct: 62 VDFVNTLFNRKGNSPIKKLALKIHLKDNQSLQNQTHVQSWIHRVLSRGGVTD--LDLFIT 119
Query: 133 VRCDIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
+ + P I S TL L+L +K L +++Y LP L +L L F
Sbjct: 120 FKGKFQLVPLLIFKSNTLVKLRLGRGFTIK--------LCHENVY-LPMLKTLCLDTVDF 170
Query: 193 WENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYRLLH--KTEL 250
+H+ L L++E+ + C S+SS +L L + R H L
Sbjct: 171 DGDHNVFETLLPRCPLLEELVLEDQRWKQW-CG-SVSSPSLKRLRI----RFFHIPIISL 224
Query: 251 SSPSLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDREMLMWANYPQPPFILLS 310
P L K NL SL + +N +W EQE R++ +++ P ++
Sbjct: 225 DVPGLVYLELSCIFGSKYANVNLDSLVEARLN--HWVEEQELRKLRDGSSHLVPA-DMMD 281
Query: 311 WLLKLPNIKLLTFSACTLQALFLF 334
+ + +K+L ++ L+ LF F
Sbjct: 282 LITGIRKVKVLHLTSDALE-LFYF 304
>AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18153852-18155391
FORWARD LENGTH=416
Length = 416
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 45/318 (14%)
Query: 23 ENEDRLSNLPDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXX---XX 79
E D ++ LPD +L +L L+ K +V+T V S RW++LW +
Sbjct: 2 EECDYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQFTNPHHEE 61
Query: 80 XFTKFMSRLLT------LRDGSIALQNLDFEREGFVEPHLLKRIMKYAVSHNIQQLRLSV 133
KFM R + L+ I + R+ F+E L+ ++ + H +
Sbjct: 62 GLIKFMDRFMESNCRSRLQKFMIRYFECNGYRDRFME--LIGTVVDCGIQHLYVYMHTCN 119
Query: 134 RCDIKHFPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAFW 193
R D I SKTL SLKL Y + P + +LP L L L+ +
Sbjct: 120 RVDF--IRQNIYKSKTLVSLKL----------YNVELKNPDFVVSLPCLKILKLMKICYG 167
Query: 194 ENHHGIAEPFSAFIKLNSLIIENCSLSEAHCTLSISSRTLCHLTVFNQYRLLHKTELSSP 253
E+ + E +I C + E + + Q +L + +P
Sbjct: 168 EDGPLVVEK----------LISGCPVLE-------DLELIKPFDILTQDVILF-LRIDAP 209
Query: 254 SLRTFAFEGTPYQKLTGSNLSSLEQVHINVANWSLEQEDREMLMWANYPQPPFILLSWLL 313
L+ F + + ++ N+SSL + I A S E L+ A P+ I+ +L
Sbjct: 210 RLKYMTFYESRFDRIMVKNMSSLFSIEIR-AKSSFEYGG---LLKAEDPRKRAIICDFLT 265
Query: 314 KLPNIKLLTFSACTLQAL 331
+ +++ + S L+ L
Sbjct: 266 VISSVRHMIISGSILEEL 283
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 23 ENEDRLSNL-PDCILLHLLSFLKVKYAVQTCVLSTRWKDLWKRLHNXXXXXXXXXXXXXF 81
EN+D +S L PD +L +L L K +V+T +LSTRW+ +W+R+
Sbjct: 2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPG-LDLNQTNFRYKGL 60
Query: 82 TKFMSRLLTLRDGSIALQ-NLDFE-REGFVEPHLLKRIMKYAVSHNIQQLRLSVRCDIKH 139
F++R L L S+ Q L+F+ R+ E L + + V+ +Q L ++ C IK
Sbjct: 61 KGFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHL-VNNYCPIK- 118
Query: 140 FPHCIISSKTLTSLKLAIHPKVKSPCYKKQTLFPKSLYNLPALTSLHLVNFAF 192
P I +TL LKL +V + +LP L ++HL++ F
Sbjct: 119 LPGSISMCETLVHLKLV---EVGIDSFDS--------VSLPRLETMHLLSVWF 160