Miyakogusa Predicted Gene

Lj0g3v0287649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287649.1 Non Chatacterized Hit- tr|B9G712|B9G712_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,39.13,3.1,MsrA,Peptide methionine sulphoxide reductase MsrA; no
description,Peptide methionine sulphoxide redu,CUFF.19233.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfox...   261   2e-70
AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4...   255   1e-68
AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfox...   246   6e-66
AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfox...   243   8e-65
AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase...   115   3e-26
AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase...   114   6e-26

>AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfoxide
           reductase 1 | chr5:24775107-24776147 FORWARD LENGTH=202
          Length = 202

 Score =  261 bits (666), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 119/188 (63%), Positives = 148/188 (78%)

Query: 4   SDLDTNPALKLDSDTPINPDHEFAEFGAGCFWGAELAFQRIAGVVKTEVGYSQGHHDNPD 63
           +++D +P  ++  D    P ++F +FGAGCFW  ELA+QR+ GV +TEVGYSQG   +P 
Sbjct: 15  TNMDPSPIAQVIDDEAPAPGNQFTQFGAGCFWSVELAYQRVPGVTQTEVGYSQGITHDPS 74

Query: 64  YKLVCTGTTNHAELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGTQYRSGIYYY 123
           YK VC+GTTNHAE+VR+Q+DPK C Y +LL++FW++ DPT LNRQG DVGTQYRSGIY+Y
Sbjct: 75  YKDVCSGTTNHAEIVRVQYDPKECSYQSLLDLFWSKHDPTTLNRQGNDVGTQYRSGIYFY 134

Query: 124 NETQARLAQESKEAKQLELKEKVVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGC 183
           N  Q +LA+ES E  Q ++  KVVTEILPAK+FYRAEE+HQQYL KGG  GLKQS EKGC
Sbjct: 135 NPEQEKLARESLERHQQQVDRKVVTEILPAKKFYRAEEHHQQYLSKGGRFGLKQSTEKGC 194

Query: 184 TDPIRCYG 191
            DPIRCYG
Sbjct: 195 NDPIRCYG 202


>AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4 |
           chr4:12898802-12899998 REVERSE LENGTH=258
          Length = 258

 Score =  255 bits (651), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 140/177 (79%), Gaps = 1/177 (0%)

Query: 15  DSDTPINPDHEFAEFGAGCFWGAELAFQRIAGVVKTEVGYSQGHHDNPDYKLVCTGTTNH 74
           D D P +   +FA+FGAGCFWG ELA+QR+ GV KTEVGYS G   NP Y+ VCTGTT H
Sbjct: 83  DDDVP-SSGQQFAQFGAGCFWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTTGH 141

Query: 75  AELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGTQYRSGIYYYNETQARLAQES 134
            E+VR+Q+DPK C + +LL+VFW R DPT LNRQGGDVGTQYRSGIYYY + Q R+A+E+
Sbjct: 142 NEVVRVQYDPKECSFESLLDVFWNRHDPTTLNRQGGDVGTQYRSGIYYYTDEQERIAREA 201

Query: 135 KEAKQLELKEKVVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCYG 191
            E +Q  L +++VTEILPA +FYRAE YHQQYL KGG  GL+QSAEKGC DPIRCYG
Sbjct: 202 VEKQQKILNKRIVTEILPATKFYRAENYHQQYLAKGGRMGLRQSAEKGCKDPIRCYG 258


>AT5G07470.1 | Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfoxide
           reductase 3 | chr5:2362760-2364286 REVERSE LENGTH=202
          Length = 202

 Score =  246 bits (629), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 145/189 (76%), Gaps = 2/189 (1%)

Query: 4   SDLDTNP-ALKLDSDTPINPDHEFAEFGAGCFWGAELAFQRIAGVVKTEVGYSQGHHDNP 62
           +++D +P A   D DTP  P ++FA+FGAGCFWG ELAFQR+ GV +TE GY+QG  DNP
Sbjct: 15  TNMDPSPIAQGNDDDTPA-PGNQFAQFGAGCFWGVELAFQRVPGVTQTEAGYTQGTVDNP 73

Query: 63  DYKLVCTGTTNHAELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGTQYRSGIYY 122
            Y  VC+GTT H+E+VR+Q+D   C Y +LL++FW+R DPT LNRQG DVGTQYRSGIY+
Sbjct: 74  SYGDVCSGTTGHSEVVRVQYDLNDCTYESLLDLFWSRHDPTTLNRQGNDVGTQYRSGIYF 133

Query: 123 YNETQARLAQESKEAKQLELKEKVVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKG 182
           Y   Q +LA+ES E  Q +++ K++TEILPAK+FYRAEE+HQQYL KGG  G  QS  KG
Sbjct: 134 YTPEQEKLARESLERHQQQMERKIMTEILPAKKFYRAEEHHQQYLSKGGRFGQGQSTAKG 193

Query: 183 CTDPIRCYG 191
           C DPIRCYG
Sbjct: 194 CNDPIRCYG 202


>AT5G07460.1 | Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfoxide
           reductase 2 | chr5:2360844-2361885 REVERSE LENGTH=218
          Length = 218

 Score =  243 bits (619), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 115/181 (63%), Positives = 138/181 (76%), Gaps = 1/181 (0%)

Query: 11  ALKLDSDTPINPDHEFAEFGAGCFWGAELAFQRIAGVVKTEVGYSQGHHDNPDYKLVCTG 70
           A + D+D P  P +EFAEF AGCFWG ELAFQRI GV  TEVGY+ G   NP Y+ VCT 
Sbjct: 39  AQEPDNDVPA-PGNEFAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTN 97

Query: 71  TTNHAELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGTQYRSGIYYYNETQARL 130
           TTNHAE+VR+Q+DPK C Y  LL++FW+R +PT LNRQG  +G QYRSGIY+Y   Q +L
Sbjct: 98  TTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKL 157

Query: 131 AQESKEAKQLELKEKVVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCY 190
           A+ES E +Q +L++K+VTEILPAK+FY+AEEYHQQYL KGG  G  QS  K C DPIRCY
Sbjct: 158 ARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPAKSCKDPIRCY 217

Query: 191 G 191
           G
Sbjct: 218 G 218


>AT2G18030.1 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841496 FORWARD LENGTH=254
          Length = 254

 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 11/173 (6%)

Query: 1   MATSDLDTNPALKLD---SDTPIN-PDHEF--AEFGAGCFWGAELAFQRIAGVVKTEVGY 54
           +  S LD   ++++    SDT ++ PD     A F  G FW +E AF  I GVV+T  GY
Sbjct: 23  LCVSLLDKTVSIRISNQISDTVVDSPDRPLKSAVFALGSFWRSEAAFGCINGVVRTSAGY 82

Query: 55  SQGHHDNPDYKLVCTGTTNHAELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGT 114
           + G   NP+Y+       +HAE V++++DP++  Y  LL+VFW+  D   +  QG DVG 
Sbjct: 83  AGGTKTNPEYR----NLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPDVGN 138

Query: 115 QYRSGIYYYNETQARLAQESKEAKQLELKEKVV-TEILPAKRFYRAEEYHQQY 166
           QYRS I+  +  + RLA  SKE +QL  +  +V T+I     FYRAE  HQ++
Sbjct: 139 QYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQKF 191


>AT2G18030.2 | Symbols:  | Peptide methionine sulfoxide reductase
           family protein | chr2:7840207-7841206 FORWARD LENGTH=192
          Length = 192

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 11/174 (6%)

Query: 1   MATSDLDTNPALKLD---SDTPIN-PDHEF--AEFGAGCFWGAELAFQRIAGVVKTEVGY 54
           +  S LD   ++++    SDT ++ PD     A F  G FW +E AF  I GVV+T  GY
Sbjct: 23  LCVSLLDKTVSIRISNQISDTVVDSPDRPLKSAVFALGSFWRSEAAFGCINGVVRTSAGY 82

Query: 55  SQGHHDNPDYKLVCTGTTNHAELVRIQFDPKLCPYTNLLNVFWARIDPTALNRQGGDVGT 114
           + G   NP+Y+       +HAE V++++DP++  Y  LL+VFW+  D   +  QG DVG 
Sbjct: 83  AGGTKTNPEYR----NLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPDVGN 138

Query: 115 QYRSGIYYYNETQARLAQESKEAKQLELKEKVV-TEILPAKRFYRAEEYHQQYL 167
           QYRS I+  +  + RLA  SKE +QL  +  +V T+I     FYRAE  HQ  L
Sbjct: 139 QYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQVQL 192