Miyakogusa Predicted Gene

Lj0g3v0287499.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287499.2 tr|A8IWU8|A8IWU8_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_190480 PE=4
SV=1,29.27,0.000000000000002,seg,NULL,CUFF.19221.2
         (497 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48340.1 | Symbols:  | unknown protein; Has 1807 Blast hits t...   401   e-112
AT5G48340.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   394   e-110

>AT5G48340.1 | Symbols:  | unknown protein; Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:19590785-19592487 FORWARD LENGTH=510
          Length = 510

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/507 (43%), Positives = 307/507 (60%), Gaps = 23/507 (4%)

Query: 1   MINLFLSEPNWNDGGADDGSSELRIRLLKELETVIWSAMS---RAEARMWLCKTVAGLKC 57
           M+NLFLSEP WND      +  + + LL +L + I S ++   R+EAR+WLC  ++ +  
Sbjct: 1   MVNLFLSEPKWNDDAQKSSNINVILPLLNKLGSQIQSLVTHGARSEARLWLCSALSTI-S 59

Query: 58  VAPRHQRELFVDLLKTRRKKQSLASQLLHLMFDKSPQKLGSVLARRTRVLEDFFIGNPKR 117
           ++P  Q  +F+ LL+++ +K    SQ+L +MF+K P+KLG +LA+R+ +LE FF GN KR
Sbjct: 60  ISPSKQLNIFMKLLRSKPRKMQFLSQVLTMMFEKRPRKLGFLLAKRSYILEKFFEGNQKR 119

Query: 118 VSQWFLYVGLEQG----KGLRALSQFAFKNRDICWEELEWKGKHGQSPAMVATKPHYFLD 173
           + +WF     + G    +G +AL+QFAF NRDICWEELEW+GKHGQSPA+VATKPHY LD
Sbjct: 120 ILEWFSEFAYDGGSDHKRGAKALAQFAFANRDICWEELEWRGKHGQSPAVVATKPHYLLD 179

Query: 174 LDIQRTVENFLENVPLFWSSSEVAESVKDGDIFQIDRSFFVRYFEGLMYKEDSRDAWEVV 233
           LD++RT++NFL+NVP FWSS+E AES+KDG I  +D  FF+  F   MY+ED  D W+ V
Sbjct: 180 LDVERTIQNFLDNVPEFWSSNEFAESLKDGQILFLDTKFFIDLFIRFMYEEDMYDVWDAV 239

Query: 234 NEFLMEQPFSCLCEHLLITLEDRELLYFLELLCKYPAPKFEFQHLDGVSHLFLFVLSKCG 293
            EFL E+ FS L +HLLITLE+R+L  FLELL  Y  P  E       S     +LS+  
Sbjct: 240 EEFLREESFSSLTQHLLITLEERDLCRFLELLGNYFEPGIESWDSGDSSRWLGVLLSRYV 299

Query: 294 ASGSIDWMLLLNAVITQGRQLLRLLRDEEAQESLVKIDEIVSKISAIPSDANSLTPIFKN 353
            + SID +LLL+++I QGRQLLRL+RDE   +    + E +++I     + +S + I + 
Sbjct: 300 DTESIDELLLLSSIINQGRQLLRLVRDENGNDEGELLKETMAEICRGLENESSFSVILRE 359

Query: 354 TYKMKTIEAVKCLGLQSWVFFYRLSQECQTPESWESIFGDNQIGFRNSNEHALLDED--- 410
             KMK I+ +K LGL SW   +RLS+ECQTP+SWE +F +N I FR S++H+LL  +   
Sbjct: 360 LSKMKHIQVIKLLGLLSWTIHFRLSEECQTPDSWELLFRENGIEFRRSSDHSLLSYNGFS 419

Query: 411 ---VPSEEDCSGFDLVXXXXXXXXXXXXXXXXXXXXXXXXXXELLDFGSAGQKLDFLSNT 467
                  +  S                               ELLD  S          +
Sbjct: 420 EESESDSDSRSRVSKKRHKREKKKRKKKKKRAFDDDDDRGDDELLDLHSI---------S 470

Query: 468 RSWLLSTDGYCSAWSSIYLSTFIGNVC 494
           RSWLLSTDG+ + W+S+ L  +I   C
Sbjct: 471 RSWLLSTDGFSATWTSVDLPEYIAKYC 497


>AT5G48340.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 14 growth stages. |
           chr5:19590785-19592477 FORWARD LENGTH=506
          Length = 506

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/496 (43%), Positives = 302/496 (60%), Gaps = 23/496 (4%)

Query: 1   MINLFLSEPNWNDGGADDGSSELRIRLLKELETVIWSAMS---RAEARMWLCKTVAGLKC 57
           M+NLFLSEP WND      +  + + LL +L + I S ++   R+EAR+WLC  ++ +  
Sbjct: 1   MVNLFLSEPKWNDDAQKSSNINVILPLLNKLGSQIQSLVTHGARSEARLWLCSALSTI-S 59

Query: 58  VAPRHQRELFVDLLKTRRKKQSLASQLLHLMFDKSPQKLGSVLARRTRVLEDFFIGNPKR 117
           ++P  Q  +F+ LL+++ +K    SQ+L +MF+K P+KLG +LA+R+ +LE FF GN KR
Sbjct: 60  ISPSKQLNIFMKLLRSKPRKMQFLSQVLTMMFEKRPRKLGFLLAKRSYILEKFFEGNQKR 119

Query: 118 VSQWFLYVGLEQG----KGLRALSQFAFKNRDICWEELEWKGKHGQSPAMVATKPHYFLD 173
           + +WF     + G    +G +AL+QFAF NRDICWEELEW+GKHGQSPA+VATKPHY LD
Sbjct: 120 ILEWFSEFAYDGGSDHKRGAKALAQFAFANRDICWEELEWRGKHGQSPAVVATKPHYLLD 179

Query: 174 LDIQRTVENFLENVPLFWSSSEVAESVKDGDIFQIDRSFFVRYFEGLMYKEDSRDAWEVV 233
           LD++RT++NFL+NVP FWSS+E AES+KDG I  +D  FF+  F   MY+ED  D W+ V
Sbjct: 180 LDVERTIQNFLDNVPEFWSSNEFAESLKDGQILFLDTKFFIDLFIRFMYEEDMYDVWDAV 239

Query: 234 NEFLMEQPFSCLCEHLLITLEDRELLYFLELLCKYPAPKFEFQHLDGVSHLFLFVLSKCG 293
            EFL E+ FS L +HLLITLE+R+L  FLELL  Y  P  E       S     +LS+  
Sbjct: 240 EEFLREESFSSLTQHLLITLEERDLCRFLELLGNYFEPGIESWDSGDSSRWLGVLLSRYV 299

Query: 294 ASGSIDWMLLLNAVITQGRQLLRLLRDEEAQESLVKIDEIVSKISAIPSDANSLTPIFKN 353
            + SID +LLL+++I QGRQLLRL+RDE   +    + E +++I     + +S + I + 
Sbjct: 300 DTESIDELLLLSSIINQGRQLLRLVRDENGNDEGELLKETMAEICRGLENESSFSVILRE 359

Query: 354 TYKMKTIEAVKCLGLQSWVFFYRLSQECQTPESWESIFGDNQIGFRNSNEHALLDED--- 410
             KMK I+ +K LGL SW   +RLS+ECQTP+SWE +F +N I FR S++H+LL  +   
Sbjct: 360 LSKMKHIQVIKLLGLLSWTIHFRLSEECQTPDSWELLFRENGIEFRRSSDHSLLSYNGFS 419

Query: 411 ---VPSEEDCSGFDLVXXXXXXXXXXXXXXXXXXXXXXXXXXELLDFGSAGQKLDFLSNT 467
                  +  S                               ELLD  S          +
Sbjct: 420 EESESDSDSRSRVSKKRHKREKKKRKKKKKRAFDDDDDRGDDELLDLHSI---------S 470

Query: 468 RSWLLSTDGYCSAWSS 483
           RSWLLSTDG+ + W+S
Sbjct: 471 RSWLLSTDGFSATWTS 486