Miyakogusa Predicted Gene
- Lj0g3v0287449.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0287449.2 Non Chatacterized Hit- tr|F6H257|F6H257_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,61.95,0,TPR-like,NULL; PPR,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; coiled-coil,NULL; PPR: ,CUFF.19266.2
(504 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 471 e-133
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 3e-73
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 174 1e-43
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 174 1e-43
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 174 1e-43
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 9e-35
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 3e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 1e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 77 4e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 76 7e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 8e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 74 3e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 73 5e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 3e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 68 2e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 66 5e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 66 7e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 5e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 7e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 6e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 1e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 5e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 56 6e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 9e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 54 3e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 4e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 52 8e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 50 4e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 50 4e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 50 4e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/471 (49%), Positives = 319/471 (67%), Gaps = 2/471 (0%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
T + + LYS+ISPLGDP SV P L+NW+Q G V EL RIV LR RKRF AL+
Sbjct: 19 TNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALE 78
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
VS+WM+ G+C P + AV L+LIGRV G +AE YF+NL + K +K +GALLNCYV
Sbjct: 79 VSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVR 138
Query: 153 AGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
+V+KSL +KMK+MGFV S L YNNIM LYT QHEKVP VL MKE+ V+PD +S
Sbjct: 139 QQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYS 198
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
YRIC+N++GA DLE + L +E DI +DW TY+ A FY+ G D+A+ LK
Sbjct: 199 YRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMS 258
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
E++ K+D YNH+I+ YA LGKK +++RLW L+KD CK+++N++Y+T+L LVK+ L
Sbjct: 259 ENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDAL 318
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
EAE++L +W+ SGN YDF+VPN ++ GY K + EKAE ML + +GK TP SW ++
Sbjct: 319 VEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELV 378
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
A+ + K +E AF+C K AL V ++ WRP +V+S+LSWV D ++EVE FV SL
Sbjct: 379 ATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASL 438
Query: 452 KKVMSMNRDMYLSLIKLYVR-CGREVDGVLESMKADNIELDEEMEEILNSR 501
+ + +N+ MY +L+K +R GR +D +L+ MK D IE+DEE IL++R
Sbjct: 439 RNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTR 489
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 266/460 (57%), Gaps = 20/460 (4%)
Query: 9 ILRNKF--HSFTATFQLLRPYCSASTTVTINRRNLYSRISPLGDPSLSVVPVLENWLQEG 66
ILR F HS T L PY + L R++ GDPS S++ VL+ WL +G
Sbjct: 17 ILRRSFLFHSGKTTPSPLDPYDT-----------LQRRVARSGDPSASIIKVLDGWLDQG 65
Query: 67 HAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESA 126
+ V+ EL I+K LR RF+ ALQ+S+WMS + I GD A++L+LI +V GL A
Sbjct: 66 NLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEA 125
Query: 127 ESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP-LHYNNIMSLYT 185
E +F+ + + ++GALLNCY + K+ Q+MK++GF+ L YN +++LY
Sbjct: 126 EKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYV 185
Query: 186 RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDW 245
RT ++ V +L M+++ V PDIF+ L++Y SD+E MEK L + E + + +DW
Sbjct: 186 RTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDW 245
Query: 246 MTYSTVANFYVKAGLKDKALIYLKKCED--KAYKRDAVAYNHMISHYASLGKKKDMMRLW 303
TY+ AN Y+KAGL +KAL L+K E A KR AY ++S Y + GKK+++ RLW
Sbjct: 246 RTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH-AYEVLMSFYGAAGKKEEVYRLW 304
Query: 304 KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
L K+ N YI+++ L+K+ D+EE EK++ +WE + +D ++P++L+ GY +K
Sbjct: 305 SLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKK 363
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G++EKAE ++ +V K + ++W +A G+ MEKA + +K A+ V GWRP
Sbjct: 364 GMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEV--SKPGWRP 421
Query: 424 KSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYL 463
V+ S + ++ RD+E + + L + ++ D L
Sbjct: 422 HQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISYDQLL 461
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 263/465 (56%), Gaps = 14/465 (3%)
Query: 41 LYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSK 100
+Y +IS + P L VL W + G + EL R+VK LR KR QAL+V +WM+++
Sbjct: 69 IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128
Query: 101 G-LCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKS 159
G + D A+QL+LIG+VRG+ AE +F L ++ K +V+G+LLN YV A S +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188
Query: 160 LSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNS 218
+ + M+D G+ + PL +N +M+LY +++KV ++ MK+ + DI+SY I L+S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248
Query: 219 YGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKR 278
G+ +E ME + ++++++ I +W T+ST+A Y+K G +KA L+K E + R
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308
Query: 279 DAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLL 338
+ + Y++++S Y SLG KK++ R+W + K N Y ++ LV++GD+E AEK+
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368
Query: 339 GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
+W ++YD ++PN+L+ Y + +E AE + MV+ G P+ ++W I+A GH K
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428
Query: 399 ENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMN 458
+ +A C + A + + WRPK ++S + D+ E + L++ +
Sbjct: 429 RCISEALTCLRNAFSAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLE 487
Query: 459 RDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEMEEILNSRLQ 503
YL+LI +VD E+ +N E+D + L ++LQ
Sbjct: 488 DKSYLALI--------DVD---ENRTVNNSEIDAHETDALLTQLQ 521
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 259/467 (55%), Gaps = 6/467 (1%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
TV R L R+ L S V + W +EGH+VR EL RIV+ LR KR+ AL+
Sbjct: 55 TVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALE 114
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
+ EWM + + GD AV L+LI ++RGL SAE +F+++ D + +LL+ YV
Sbjct: 115 ICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQ 174
Query: 153 AGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
DK+ + +KM + GF+ S L YN+++S+Y Q EKVP ++ +K SPDI +
Sbjct: 175 NKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVT 233
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y + L ++ + +D+E EK+ K + E + DW+TYS + N Y K +KA + LK+
Sbjct: 234 YNLWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEM 292
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
E K++ VAY +IS +A+LG K + WK K + KK + EY++M+ +VKLG+
Sbjct: 293 EKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEF 352
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
E+A+ L +WE T D ++PN++L Y + + E +V+KG P+ ++W I+
Sbjct: 353 EQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEIL 412
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
++ +++MEK CF +A+ + K W +V + + +++ E + L
Sbjct: 413 TWAYLKRKDMEKVLDCFGKAIDSV---KKWTVNVRLVKGACKELEEQGNVKGAEKLMTLL 469
Query: 452 KKVMSMNRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEMEEIL 498
+K +N +Y SL++ Y + G V E M DN+ELDEE +E++
Sbjct: 470 QKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 262/462 (56%), Gaps = 4/462 (0%)
Query: 41 LYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSK 100
LY+R+ G + V L +L+ V E+ +K LR R + AL++SE M +
Sbjct: 25 LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84
Query: 101 GLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSL 160
G+ + D+A+ L+L+ + R + + E+YF +L ++ KTE +G+LLNCY +K+
Sbjct: 85 GMNKTV-SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 143
Query: 161 SQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY 219
+ KMK++ S + YN++M+LYT+T + EKVP ++ +K + V PD ++Y + + +
Sbjct: 144 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 203
Query: 220 GARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRD 279
A +D+ +E+++E++ +G +A DW TYS +A+ YV AGL KA L++ E K +RD
Sbjct: 204 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 263
Query: 280 AVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLG 339
AY +I+ Y LGK ++ R+W+ + K N Y+ M+ LVKL DL AE L
Sbjct: 264 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFK 323
Query: 340 QWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKE 399
+W+ + +TYD ++ N+L+ Y+++GLI+KA + +G +W I +V
Sbjct: 324 EWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSG 383
Query: 400 NMEKAFQCFKEALAVLAENKG-WRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK-VMSM 457
+M +A +C +A+++ + G W P + V +++S+ +D+ E+ + LK ++
Sbjct: 384 DMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNI 443
Query: 458 NRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEMEEILN 499
+++ LI+ Y G+ + +K +N+E++E +++L+
Sbjct: 444 GAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLD 485
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 256/486 (52%), Gaps = 6/486 (1%)
Query: 8 AILRNKFHSFTATFQLLRPYCSASTTVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGH 67
A+ + +F++ +L+ S T ++ RN I P SV +L+ + GH
Sbjct: 7 AVAKTRFNTTGVVSRLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGH 66
Query: 68 AVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAE 127
AV EL+ I K L R+ ALQ+ EWM ++ D A++L+LI + GL+ E
Sbjct: 67 AVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGE 126
Query: 128 SYFQNLSDSDKTEKVHGA----LLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMS 182
YF+ L S + +V + LL YV V ++ + M+K+ +GF V+P +N +M
Sbjct: 127 EYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMK 186
Query: 183 LYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIA 242
LY + Q+EKV V++MMK + + ++ SY + +N+ S + +E + +++ + +
Sbjct: 187 LYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVE 246
Query: 243 VDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL 302
V W + T+AN Y+K+G +KA + L+ E + + + Y +I+ YASLG K+ ++RL
Sbjct: 247 VGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRL 306
Query: 303 WKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSR 362
W++ K C + YI +L LVK GDLEEAE++ +WE YD +V N+LL Y R
Sbjct: 307 WEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVR 366
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWR 422
G I KAE++ ++++G TP +W I+ G V ENMEKA + VL WR
Sbjct: 367 NGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVF-VLMRRCHWR 425
Query: 423 PKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVLES 482
P ++V +I + IEE +V L ++ + +Y L++++ R + E
Sbjct: 426 PSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEM 485
Query: 483 MKADNI 488
MK D +
Sbjct: 486 MKLDKL 491
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 255/474 (53%), Gaps = 4/474 (0%)
Query: 30 ASTTVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQ 89
A+ TV +R LY ++S L +V L ++ EG VR +L R KTLR +R
Sbjct: 62 AAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQH 121
Query: 90 ALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKT-EKVHGALLN 148
A ++ +WM + + D A+ L+LIG+ +GLE+AE+YF NL S K + +GAL+N
Sbjct: 122 AFEIFDWMEKRKMT-FSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMN 180
Query: 149 CYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSP 207
CY + +K+ + + M ++ FV+ L +NN+MS+Y R Q EKVP ++ MK+ G+SP
Sbjct: 181 CYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISP 240
Query: 208 DIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIY 267
+Y I + S G+ +DL+ +EK+++++ + + W T+S +A Y KAGL +KA
Sbjct: 241 CGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSA 300
Query: 268 LKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVK 327
LK E+K + +++ ++S YA + K ++ R+W+ K + N Y+ ML + K
Sbjct: 301 LKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSK 360
Query: 328 LGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNS 387
LGDL+ +K+ +WE YD ++ NI + Y + + E+AE +L + K K P +
Sbjct: 361 LGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKA 420
Query: 388 WSIIASGHVAKENMEKAFQCFKEALAVLAENKG-WRPKSDVVSSILSWVTDNRDIEEVED 446
++ + + + A + + A++ AENK W S++VS +D++ ED
Sbjct: 421 RQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAED 480
Query: 447 FVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEMEEILNS 500
F L ++ + LIK Y + + E + IE+ EE++++L +
Sbjct: 481 FCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKT 534
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 257/484 (53%), Gaps = 5/484 (1%)
Query: 18 TATFQLLRPYCSASTTVTINRRNLYSRISPLGDPSLSVVP-VLENWLQEGHAVRDQELQR 76
TAT ++ ++ T R++Y ++S LG + L ++ EG V+ +L R
Sbjct: 18 TATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIR 77
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
K LR ++ +AL++ EWM K + D A++L LI + +GLE+AE+YF +L DS
Sbjct: 78 YAKDLRKFRQPQRALEIFEWMERKEI-AFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDS 136
Query: 137 DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPD 195
K + +G+LLNCY + K+ + + M D+ VS L +NN+M++Y Q EKVP
Sbjct: 137 IKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPA 196
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
++ MKE ++P +Y + + S G+ DL+ +EK+L++++ EG+ W T++ +A Y
Sbjct: 197 LVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIY 256
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN 315
+K GL KA LK E+ Y+ +I+ Y + ++ R+W L K N
Sbjct: 257 IKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNN 316
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
Y+TML L KL D++ +K+ +WE + TYD ++ N+ + Y ++ + E+AE +
Sbjct: 317 SSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNG 376
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
+ K K + ++ + + + A + F+ AVL ++K W S+++SS
Sbjct: 377 AMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEA--AVLDQDKNWTWSSELISSFFLHF 434
Query: 436 TDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEME 495
+ +D++ E+F +L K ++ + Y L+K Y+ G+ + + ++ I +DEE E
Sbjct: 435 EEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQE 494
Query: 496 EILN 499
+L+
Sbjct: 495 CLLS 498
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 217/370 (58%), Gaps = 7/370 (1%)
Query: 97 MSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSV 156
MS + I GD A++L+LI +V GL AE +F+ + + ++GALLNCY +
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 157 DKSLSQMQKMKDMGFVSP-LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRIC 215
K+ Q+MK++GF+ L YN +++LY RT ++ V +L M+++ V PDIF+
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 216 LNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED-- 273
L++Y SD+E MEK L + E + + +DW TY+ AN Y+KAGL +KAL L+K E
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
A KR AY ++S Y + GKK+++ RLW L K+ N YI+++ L+K+ D+EE
Sbjct: 181 NAQKRKH-AYEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEE 238
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
EK++ +WE + +D ++P++L+ GY +KG++EKAE ++ +V K + ++W +A
Sbjct: 239 VEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLAL 298
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK 453
G+ MEKA + +K A+ V GWRP V+ S + ++ RD+E + + L +
Sbjct: 299 GYKMAGKMEKAVEKWKRAIEV--SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSE 356
Query: 454 VMSMNRDMYL 463
++ D L
Sbjct: 357 RGHISYDQLL 366
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 263/508 (51%), Gaps = 38/508 (7%)
Query: 16 SFTATFQLL---RPYCSASTTVTINRRNLY------SRISPLGDPSLSVVPVLENWLQEG 66
SF +Q + RPY + +T++ L RI+ + ++PVLE W Q+G
Sbjct: 4 SFPFVYQNMLAKRPYGAYQNVITVSMSWLKIHGSCPHRITDALHRNAQIIPVLEQWRQQG 63
Query: 67 HAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESA 126
+ V ++ I+K LR + QALQVSEWMS + +C ++P D A +L LI V GLE A
Sbjct: 64 NQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEA 123
Query: 127 ESYFQNLSDSDKTEKVHGALLNCYVMAG-SVDKSLSQMQKMKDMG-FVSPLHYNNIMSLY 184
E +F+++ + + + V+ +LLN Y + ++ K+ + QKM+D+G + P+ YN +MSLY
Sbjct: 124 EKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLY 183
Query: 185 TRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVD 244
+ + EKV ++L MK++ V D + L Y A D+ MEK L K E I ++
Sbjct: 184 SALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLE 243
Query: 245 WMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRD-AVAYNHMISHYASLGKKKDMMRLW 303
W T +A Y++A KA+ L+ E ++ AY+H++ Y G +++++R+W
Sbjct: 244 WHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVW 303
Query: 304 KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
KL K ++ N Y T++ L+K+ D+ AE++ WE +D ++P +L GY +
Sbjct: 304 KLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDR 363
Query: 364 GLIEKAETMLRS------MVDKGKTPTPNSWSIIASGHVAK---ENMEKAFQCFKEALAV 414
G+ EKAE ++ S ++K TP W K +N+ + Q F +AL V
Sbjct: 364 GMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGDQMKPSDLKCLIKNLRDSKQ-FSKALQV 422
Query: 415 LAENKGWRPKSDVVSSILS------WVTDN-RDIEEVEDFVNSLKKVMSMNRDMYLSLIK 467
W + V + L ++T+N +EE E + ++ + M + +Y++L+
Sbjct: 423 ----SEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMK-DYSVYVALLS 477
Query: 468 LYVRC----GREVDGVLESMKADNIELD 491
Y + G VD +L M+ +N++ D
Sbjct: 478 SYAKSDKNLGNMVDEILREMEENNVDPD 505
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 240/464 (51%), Gaps = 25/464 (5%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
TV + L+ I + P LS+ L+ W++EG+ + E+ + + LR R+ + +ALQ
Sbjct: 124 TVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
+SEW+ + + D A +L+L ++RGLE E+ Q + S K E ++ LL V
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 153 AGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG+V KS KMKD+GF +S + ++ L+ R ++ +K+ DVL +M+++ + P + +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLT 300
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y+I ++ GA +D+ ME++LE ++ EG + +D+ T + A Y AGLKDKA LK+
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK-KQLNREYITMLGCLVKLGD 330
E ++ + + A+ ++S YASLG++ ++ R+WK+ C+ K E + + KL
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGKLNK 415
Query: 331 LEEAEKLLGQW-----ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
++EAE + + S +TY ++LL Y ++ K + +++ M + G
Sbjct: 416 VQEAEAIFEKIVKMDRRASSSTY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEA 470
Query: 386 NSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVE 445
+W + +V +EKA +A ++ + + I+ + D+ E
Sbjct: 471 TTWDALIKLYVEAGEVEKADSLLDKA----SKQSHTKLMMNSFMYIMDEYSKRGDVHNTE 526
Query: 446 DFVNSLKKVMSMNR-DMYLSLIKLYVRCGREVDGVLESMKADNI 488
+++ +R + +L++ Y+ G+ + +KADNI
Sbjct: 527 KIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNI 570
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 240/464 (51%), Gaps = 25/464 (5%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
TV + L+ I + P LS+ L+ W++EG+ + E+ + + LR R+ + +ALQ
Sbjct: 124 TVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
+SEW+ + + D A +L+L ++RGLE E+ Q + S K E ++ LL V
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 153 AGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG+V KS KMKD+GF +S + ++ L+ R ++ +K+ DVL +M+++ + P + +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLT 300
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y+I ++ GA +D+ ME++LE ++ EG + +D+ T + A Y AGLKDKA LK+
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK-KQLNREYITMLGCLVKLGD 330
E ++ + + A+ ++S YASLG++ ++ R+WK+ C+ K E + + KL
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGKLNK 415
Query: 331 LEEAEKLLGQW-----ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
++EAE + + S +TY ++LL Y ++ K + +++ M + G
Sbjct: 416 VQEAEAIFEKIVKMDRRASSSTY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEA 470
Query: 386 NSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVE 445
+W + +V +EKA +A ++ + + I+ + D+ E
Sbjct: 471 TTWDALIKLYVEAGEVEKADSLLDKA----SKQSHTKLMMNSFMYIMDEYSKRGDVHNTE 526
Query: 446 DFVNSLKKVMSMNR-DMYLSLIKLYVRCGREVDGVLESMKADNI 488
+++ +R + +L++ Y+ G+ + +KADNI
Sbjct: 527 KIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNI 570
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 240/464 (51%), Gaps = 25/464 (5%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
TV + L+ I + P LS+ L+ W++EG+ + E+ + + LR R+ + +ALQ
Sbjct: 124 TVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
+SEW+ + + D A +L+L ++RGLE E+ Q + S K E ++ LL V
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 153 AGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG+V KS KMKD+GF +S + ++ L+ R ++ +K+ DVL +M+++ + P + +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLT 300
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y+I ++ GA +D+ ME++LE ++ EG + +D+ T + A Y AGLKDKA LK+
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK-KQLNREYITMLGCLVKLGD 330
E ++ + + A+ ++S YASLG++ ++ R+WK+ C+ K E + + KL
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGKLNK 415
Query: 331 LEEAEKLLGQW-----ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
++EAE + + S +TY ++LL Y ++ K + +++ M + G
Sbjct: 416 VQEAEAIFEKIVKMDRRASSSTY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEA 470
Query: 386 NSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVE 445
+W + +V +EKA +A ++ + + I+ + D+ E
Sbjct: 471 TTWDALIKLYVEAGEVEKADSLLDKA----SKQSHTKLMMNSFMYIMDEYSKRGDVHNTE 526
Query: 446 DFVNSLKKVMSMNR-DMYLSLIKLYVRCGREVDGVLESMKADNI 488
+++ +R + +L++ Y+ G+ + +KADNI
Sbjct: 527 KIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNI 570
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 170/311 (54%), Gaps = 3/311 (0%)
Query: 40 NLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSS 99
+L SRI L P S VLE W+ EG+ + EL+ I K LR +R+ AL+V+EWM
Sbjct: 56 DLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQ 115
Query: 100 KGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKS 159
I D A +++LI +V G+++AE YF+ L KT + + +LL+ Y + +++
Sbjct: 116 HEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERA 175
Query: 160 LSQMQKM--KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLN 217
+ +++ D + YN +M+LY Q EKVP+V+ ++K+ VSPDIF+Y + L+
Sbjct: 176 EALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLS 235
Query: 218 SYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLK-KCEDKAY 276
S A +++ + K+LE++ + W+ Y + + Y+ + A L + E
Sbjct: 236 SCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSIS 295
Query: 277 KRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEK 336
+R+ + Y+ ++ + LG K + ++WK ++ + +R YI +L + LG L EAE+
Sbjct: 296 QREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEE 355
Query: 337 LLGQWELSGNT 347
++ QW+ S T
Sbjct: 356 IIHQWKESKTT 366
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 227/440 (51%), Gaps = 15/440 (3%)
Query: 53 LSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAV 112
LSV L+ W+++G +E + + LR R+ F +ALQ++EW+ + D A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 199
Query: 113 QLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF- 171
+L+LI +VRG E+Y + + +S + E V+ LL +V +V + + KMKD+GF
Sbjct: 200 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 259
Query: 172 VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKL 231
+S N ++ LY R ++ +K+ DVL +++++ + P++ +Y+I +++ G+ +D+ ME++
Sbjct: 260 LSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQI 318
Query: 232 LEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYA 291
+E +++EG + +D + +A Y AGLK+KA LK+ E ++ + + ++S Y
Sbjct: 319 VETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYG 377
Query: 292 SLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEA-EKLLG-QWELSGNTYD 349
L ++ ++ R+WK+ ++N + I G + K+ D E EK+L +S N Y
Sbjct: 378 YLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVY- 436
Query: 350 FKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
++LL Y ++ + + +++ M D G +W + +V +EKA
Sbjct: 437 ----SVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492
Query: 410 EALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRD-MYLSLIKL 468
+A+ ++K +P ++ D+ E +K+ +R Y +LI+
Sbjct: 493 KAI----QSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQA 548
Query: 469 YVRCGREVDGVLESMKADNI 488
YV G+ E MKADNI
Sbjct: 549 YVNAKAPAYGMKERMKADNI 568
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 205/443 (46%), Gaps = 23/443 (5%)
Query: 54 SVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQ 113
SV VLE W++EG + E+ + LR RK + LQ+ EW+ + + A Q
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 114 LELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVS 173
L+L+ +V L+ AE + +++ +S + E V+ LL V+ V+K+ KMK++ F +
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPT 275
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+ N + L +K+ DVL +M+ + + P +Y +NS G D+ MEK++E
Sbjct: 276 SVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVE 335
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
I+ EG I +D S +A +Y++AGLK++A +K+ E K ++ ++ YA +
Sbjct: 336 TIKEEG-IELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADI 394
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE-------EAEKLLGQWELSGN 346
G ++ RL + N + Y + + G L+ E+L+ ++++
Sbjct: 395 GDSDNVRRLSRFVDQNPR------YDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPM 448
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
F + I Y+ ++ K +++ M + G P++W + ++ + KA
Sbjct: 449 MPYFALMEI----YTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAEL 504
Query: 407 CFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM-YLSL 465
A ++ RP +IL D+ E +K+ + M Y ++
Sbjct: 505 ILNRA----TKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETV 560
Query: 466 IKLYVRCGREVDGVLESMKADNI 488
+ Y+ G++E MKADN+
Sbjct: 561 LLAYINAKTPAYGMIERMKADNV 583
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 199/442 (45%), Gaps = 74/442 (16%)
Query: 74 LQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNL 133
L+ IV+ LR+ R QAL+VS+WM + + LP D + + L +V LE AE +F+++
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYN-LPEDFSARFHLTEKVLNLEEAEKFFESI 136
Query: 134 SDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKM-----KDMGFVSPLHYNNIMSLYTRTE 188
++ + E ++ +LL Y S +K+L + + + K + P YN++ SLY+
Sbjct: 137 PENMRFESMYNSLLRSYARQ-SGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLG 195
Query: 189 QHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTY 248
+KV ++L MKE+ V D + L Y A SD+ M+K L + + +D +T
Sbjct: 196 NRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL--ADRKEITRLDGLTM 253
Query: 249 STVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKD 308
+A KAY+ ++S Y G+ +D+ R+W K
Sbjct: 254 LAMA---------------------KAYE--------LMSLYGEAGEIEDVHRVWDKYKA 284
Query: 309 NCKKQLNREYITMLGCLVKLGDLEEAEKL-LGQWELSGNTYDFKVPNILLIGYSRKGLIE 367
+K N E+ T++G L+KLGD + AEK+ +WE SG +D ++P++L+ GY KG++
Sbjct: 285 TRQKD-NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVM 343
Query: 368 KAET-----------------MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ---- 406
KA+ +L M KG +P + + KA +
Sbjct: 344 KADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTW 403
Query: 407 -CFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSL 465
C K+ + +E+ R L +EE E+F S + +Y +L
Sbjct: 404 MCQKKVFNLFSEDYATR---------LHLTEKVLGLEEAENFFESSIPENMKDYSVYDTL 454
Query: 466 IKLYVRCGR---EVDGVLESMK 484
+ Y R + + V E M+
Sbjct: 455 LSCYARSSNTQSKAEAVFEKMR 476
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 45 ISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCP 104
I L P + +LE ++G+ V L+ ++K LR + ++AL+ S WM K +
Sbjct: 355 IRGLATP---ITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFN 411
Query: 105 ILPGDRAVQLELIGRVRGLESAESYFQ-NLSDSDKTEKVHGALLNCYVMAGSV-DKSLSQ 162
+ D A +L L +V GLE AE++F+ ++ ++ K V+ LL+CY + + K+ +
Sbjct: 412 LFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAV 471
Query: 163 MQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGA 221
+KM+++G S L +N+++SLY+ + V +L MK + PDI + L +
Sbjct: 472 FEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAY 531
Query: 222 RSDLENMEKL 231
+++MEK+
Sbjct: 532 ILAIDSMEKV 541
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
Query: 42 YSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKG 101
+SRI LG V P L+ WL+ G + L+ ++ +L +RF ALQVSEW++ +G
Sbjct: 36 HSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRG 95
Query: 102 LCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSV---DK 158
+ + D A +L L+ GL+ AE +F+++ ++ + + VH LL+ Y ++ +
Sbjct: 96 IFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAE 155
Query: 159 SLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDI-FSYRICLN 217
+ Q ++++M + P Y +++ LY + + ++L MKE+GV D + L
Sbjct: 156 ATYQTMRVQNM-LLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLK 214
Query: 218 SYGARSDLENMEKLLEKIET-EGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAY 276
+Y + D+E ME L +E E ++ W T ++A Y+K G KA+ L++ E
Sbjct: 215 AYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVD 274
Query: 277 KRDAVAYNH-MISHYASLGKKKDMMRLWKLQKDNCKK 312
+ + N ++ Y G K+D RL +L KK
Sbjct: 275 TKSKDSANKVLMMMYWDAGAKQDASRLSRLIYPKSKK 311
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 192/426 (45%), Gaps = 8/426 (1%)
Query: 52 SLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRA 111
++V L++W+ +G V ++ + LR R +AL++ EW+ + + + +
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 112 VQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF 171
LE ++ G+ E F + + E ++ L+ + G + +L M+KM+++G+
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 172 -VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
S L YN ++ + + + + LA+MK D +P + +Y I + +++ + K
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
+ ++ G + + ++Y +A + A L A Y ++ E + + ++ Y
Sbjct: 258 AFDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILY 316
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDF 350
LGK+K++ R W + + + ++ Y+ ++G+L+ AE+L + + +
Sbjct: 317 GRLGKEKELARTWNVIRGFHHVR-SKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKET 375
Query: 351 KVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ N LL Y + GLIEKA + R M G P ++ +A G + M++A + +
Sbjct: 376 EQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEM 435
Query: 411 ALAVLAENK--GWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRD--MYLSLI 466
L + P + SI+ + D+E E +K NR +Y +L
Sbjct: 436 GLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNA-KYNRYAFVYNALF 494
Query: 467 KLYVRC 472
K YV+
Sbjct: 495 KAYVKA 500
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 33 TVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQ 92
T+ + L SRI + S++P+LE W ++G+ V L+ ++K L K FT AL+
Sbjct: 30 TLPAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALE 89
Query: 93 VSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVM 152
S+WM + P D A QL L+ V GLE AE F+N+ + + + LL+ Y
Sbjct: 90 ASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTK 146
Query: 153 -AGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIF 210
+VDK+ + +KM+++GF + P +N+++ LY + ++ + V +L +K++ + ++
Sbjct: 147 PVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNM--EVG 204
Query: 211 SYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
S ++ N +++ MEK + EG I ++ T +A Y +AG +KA
Sbjct: 205 SLKVN-NVSRVYANINAMEKFKTWVSKEG-IELERDTIVAMAKAYHRAGSIEKA 256
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 177/403 (43%), Gaps = 22/403 (5%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
+VK+ +AL + + G P + AV I R + AE+ F+ + +S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 137 DKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKV 193
+ V + L+ + AG++D +L+ KM+ G + + + YN ++ Y + + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
+L M G+ P++ SY + +N ++ + +L ++ G ++D +TY+T+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIK 318
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK------DMMRLWKLQK 307
Y K G +AL+ + + Y +I G D MR+ L
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL-- 376
Query: 308 DNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIE 367
C + R Y T++ + G + EA ++L + +G + N L+ G+ G +E
Sbjct: 377 --CPNE--RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 368 KAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDV 427
A +L M +KG +P S+S + SG ++++A + +E + KG +P +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-----EKGIKPDTIT 487
Query: 428 VSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLY 469
SS++ + R +E D + +V + + Y +LI Y
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 166/386 (43%), Gaps = 50/386 (12%)
Query: 58 VLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPIL----------- 106
VL + G+++ + ++K F QAL + M GL P +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 107 -PGDRAVQLELIG--RVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQM 163
G+ +E + RVRGL E + L D + G ++++ +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG-------------FSQKGYMNEAYRVL 403
Query: 164 QKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGAR 222
++M D GF S + YN +++ + T + E VL MKE G+SPD+ SY L+ +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 223 SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVA 282
D++ ++ ++ +G I D +TYS++ + + +A ++ D
Sbjct: 464 YDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 283 YNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLG 339
Y +I+ Y G D+ + +L + +K + + +T ++ L K EA++LL
Sbjct: 523 YTALINAYCMEG---DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 340 QWEL-----SGNTY----------DFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPT 384
+ S TY +FK L+ G+ KG++ +A+ + SM+ K P
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 385 PNSWSIIASGHVAKENMEKAFQCFKE 410
+++I+ GH ++ KA+ +KE
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKE 665
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 140/313 (44%), Gaps = 26/313 (8%)
Query: 89 QALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESY--FQNLSDSDKTEKV--HG 144
+A++ + M +GLCP +R + G + E+Y + ++D+ + V +
Sbjct: 363 RAMEFLDQMRVRGLCP---NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
AL+N + + G ++ +++ ++ MK+ G +SP + Y+ ++S + R+ ++ V M E
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G+ PD +Y + + + + L E++ G + D TY+ + N Y G +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYCMEGDLE 537
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL---------------WKLQK 307
KAL + +K D V Y+ +I+ + ++ RL +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 308 DNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIE 367
+NC + ++++ G + EA+++ + D NI++ G+ R G I
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 368 KAETMLRSMVDKG 380
KA T+ + MV G
Sbjct: 658 KAYTLYKEMVKSG 670
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 8/248 (3%)
Query: 163 MQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLN-SYGA 221
+Q+ D+ + + ++ ++ Y+R +K ++ + + G P + SY L+ + +
Sbjct: 123 LQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS 182
Query: 222 RSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV 281
+ ++ E + +++ E ++ + TY+ + + AG D AL K E K + V
Sbjct: 183 KRNISFAENVFKEM-LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLL 338
YN +I Y L K D +KL + K L I+ ++ L + G ++E +L
Sbjct: 242 TYNTLIDGYCKLRKIDDG---FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 339 GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
+ G + D N L+ GY ++G +A M M+ G TP+ +++ +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 399 ENMEKAFQ 406
NM +A +
Sbjct: 359 GNMNRAME 366
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 172/399 (43%), Gaps = 25/399 (6%)
Query: 27 YCSASTTVTINRRNLYSR----ISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLR 82
+C T + RNL R +G + V + + +Q + R+ +
Sbjct: 40 FCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIA 99
Query: 83 TRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLS--DSDKTE 140
K++ L + + M SKG+ + ++ + R R L A S + +
Sbjct: 100 KTKQYELVLALCKQMESKGIAHSIY-TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQ---HEKVPDVL 197
+ LLN + V ++L + +M +MG H +++L T + KV D +
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMG-----HKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 198 AM---MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
+ M E G P+ +Y LN +LL K+E E +I +D + YS + +
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDG 272
Query: 255 YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL 314
K G D A + E K +K D + YN +I + + G+ D KL +D K+++
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG---AKLLRDMIKRKI 329
Query: 315 NREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ +T ++ VK G L EA++LL + G + N L+ G+ ++ +E+A
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
M+ M+ KG P +++I+ +G+ ++ + F+E
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 132/269 (49%), Gaps = 6/269 (2%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
L++ +V G + ++ +++M G ++P + YN+++ + + + E+ ++ +M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G PDI ++ I +N Y + +++ +L ++ G IA + +TY+T+ + ++G +
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLE 455
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITM 321
A ++ + + D V+Y ++ G+ + + ++ K++K + + Y+ +
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI-YMII 514
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ + +++A L L G D + NI++ RK + KA+ + R M ++G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKE 410
P +++I+ H+ ++ A + +E
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEE 603
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 140/323 (43%), Gaps = 9/323 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G V + + +++ GF ++ Y +++S + + ++ + +V M+EDG P + +Y
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 213 RICLNSYGARSDLEN-MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
+ LN +G N + L+EK++++G IA D TY+T+ + L +A ++
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
+ + D V YN ++ Y + K+ M++ N Y +++ + G L
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
+EA +L Q G D LL G+ R G +E A ++ M + G P +++
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
+ + + + F E G P +++L+ N EV +
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVC-----GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 452 KKV-MSMNRDMYLSLIKLYVRCG 473
K+ R+ + +LI Y RCG
Sbjct: 481 KRAGFVPERETFNTLISAYSRCG 503
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 136/310 (43%), Gaps = 12/310 (3%)
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
I+S+ + + ++ ++EDG S D++SY ++++ + +K+E +G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 240 DIAVDWMTYSTVANFYVKAGLK-DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKD 298
+TY+ + N + K G +K ++K + DA YN +I+ ++
Sbjct: 239 -CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 299 MMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
++++ K Y +L K +EA K+L + L+G + N L+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN 418
Y+R G++++A + M +KG P +++ + SG +E A F+E N
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE-----MRN 412
Query: 419 KGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYVRCG--R 474
G +P ++ + + E+ + + V ++ D+ + +L+ ++ + G
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 475 EVDGVLESMK 484
EV GV + MK
Sbjct: 472 EVSGVFKEMK 481
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 159/350 (45%), Gaps = 24/350 (6%)
Query: 89 QALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLN 148
+A+++ M+ KG P + L R +ESA S F+ + ++ + N
Sbjct: 367 EAMELKNQMAEKGTKPDV-FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI--CTFN 423
Query: 149 CYV-MAGSVDKSLSQMQKMKD---MGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
++ M G+ K ++M K+ D + +SP + +N +++++ + +V V MK
Sbjct: 424 AFIKMYGNRGK-FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G P+ ++ +++Y E + ++ G + D TY+TV + G+ +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGGMWE 541
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI--- 319
++ L + ED K + + Y ++ YA+ GK+ +M L ++ + +
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMH--SLAEEVYSGVIEPRAVLLK 598
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T++ K L EAE+ + + G + D N ++ Y R+ ++ KA +L M ++
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVS 429
G TP+ +++ + H + K+ + +E LA KG +P D++S
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILA-----KGIKP--DIIS 701
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 170/429 (39%), Gaps = 52/429 (12%)
Query: 54 SVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQ 113
S + + E G +K R +FT+ +++ + ++ GL P + +
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL- 460
Query: 114 LELIGRVRGLESAES-YFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMG 170
L + G+ G++S S F+ + + + L++ Y GS +++++ ++M D G
Sbjct: 461 LAVFGQ-NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 171 FVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENME 229
L YN +++ R E+ VLA M++ P+ +Y L++Y ++ M
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 230 KLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISH 289
L E++ + G I + T+ K L +A + +++ + D N M+S
Sbjct: 580 SLAEEVYS-GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 290 YASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYD 349
Y ++Q+ + +A +L + G T
Sbjct: 639 YG-------------------RRQM----------------VAKANGVLDYMKERGFTPS 663
Query: 350 FKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
N L+ +SR K+E +LR ++ KG P S++ + + M A + F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 410 EALAVLAENKGWRPKSDVVSS---ILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLI 466
E N G P DV++ I S+ D+ E + +K N++ Y S++
Sbjct: 724 E-----MRNSGIVP--DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 467 KLYVRCGRE 475
Y + R+
Sbjct: 777 DGYCKLNRK 785
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 163 MQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYG 220
++K+ GF SP N+++S+Y R + K VL MKE G +P + +Y + +
Sbjct: 617 FSELKERGF-SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 221 ARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK-AGLKDKALIYLKKCEDKAYKRD 279
+D E++L +I +G I D ++Y+TV Y + ++D + I+ + + D
Sbjct: 676 RSADFGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIF-SEMRNSGIVPD 733
Query: 280 AVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAE 335
+ YN I YA+ ++ + + + + K C+ N Y +++ KL +EA+
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAK 789
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM---MK 201
+LLN + + ++++ + +M +MG+ P +L QH K + +A+ M
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGY-QP-DTVTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G PD+ +Y +N R + + LL K+E +G I D + Y+T+ + K
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYNTIIDGLCKYKHM 266
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI-- 319
D A K E K K D YN +IS + G+ D RL D +K +N + +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL---SDMLEKNINPDLVFF 323
Query: 320 -TMLGCLVKLGDLEEAEKLLGQWELSGNTY-DFKVPNILLIGYSRKGLIEKAETMLRSMV 377
++ VK G L EAEKL + S + + D N L+ G+ + +E+ + R M
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
+G +++ + G + + A FK+ ++ G P + +L + +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-----DGVHPDIMTYNILLDGLCN 438
Query: 438 NRDIE-EVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDG 478
N ++E + F K+ M ++ Y ++I+ + G+ DG
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
M+K PD+ +Y + + +E ++ ++ G + + +TY+T+ + + +A
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQA 404
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNRE 317
D A + K+ D + YN ++ + G + + +++ +QK + K +
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI-VT 463
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y TM+ L K G +E+ L L G + ++ G+ RKGL E+A+ + M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 378 DKGKTPTPNSWS 389
+ G P PNS +
Sbjct: 524 EDG--PLPNSGT 533
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 187/440 (42%), Gaps = 63/440 (14%)
Query: 5 PFSAILRNKFHSFTATFQLLRPYCSASTTVTINRRNLYS---RISPLGDPSLSVVPVLEN 61
PFS L N RP+CS+ + + S + SPL SV V +
Sbjct: 8 PFSVPLLN------------RPHCSSQSHCLYKNGDFLSDDSKCSPLSSSRTSVRWVFNS 55
Query: 62 -------WLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL 114
W++ + V D +VK+ R L S W+S + +L G +++
Sbjct: 56 SSLPPPEWIEPFNDVSD-----LVKSNRN-------LLPSPWVSQ--ILNLLDGSASMES 101
Query: 115 ELIGRVRG--LESAESYFQNLSDSD----------------KTEKVHGALLNCYV----- 151
L G R ++ + ++ + SD + +K + L CYV
Sbjct: 102 NLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDV 161
Query: 152 --MAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPD 208
+A VD+ ++K F ++ N ++ + + E++ V MKE+G+ P
Sbjct: 162 LALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPT 221
Query: 209 IFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYL 268
+++Y +N + +++ E++ E +E+ G I D +TY+T+ Y KAG KA+ L
Sbjct: 222 LYTYNFLMNGLVSAMFVDSAERVFEVMES-GRIKPDIVTYNTMIKGYCKAGQTQKAMEKL 280
Query: 269 KKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKL 328
+ E + ++ D + Y MI + + L++ + + + ++G L K
Sbjct: 281 RDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKE 340
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
G L E + G+ + + +L+ GY++ G +E A +L M+D+G P ++
Sbjct: 341 GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
Query: 389 SIIASGHVAKENMEKAFQCF 408
S++ +G +E+A F
Sbjct: 401 SVVVNGLCKNGRVEEALDYF 420
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 5/250 (2%)
Query: 164 QKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGAR 222
Q+M + G P H ++ ++ + + + V M G P++ Y + ++ Y
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 223 SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVA 282
+E+ +LL ++ EG D +TYS V N K G ++AL Y C +++
Sbjct: 376 GSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 283 YNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW 341
Y+ +I G+ + RL++ + + C + + Y ++ K ++EA L +
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD-SYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 342 ELS-GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKEN 400
E G ILL G ++ E+A + M+DKG TPT + +++G
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 401 MEKAFQCFKE 410
+ +A + E
Sbjct: 554 VARACKILDE 563
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 4/275 (1%)
Query: 137 DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVP 194
+ T + L+N V A VD S ++ ++ + G + P + YN ++ Y + Q +K
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVD-SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 195 DVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
+ L M+ G D +Y + + A SD + L ++++ +G I V +S V
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG-IQVPPHAFSLVIGG 336
Query: 255 YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL 314
K G ++ + K K + Y +I YA G +D +RL D K
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y ++ L K G +EEA G + + L+ G + G +++AE +
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
M +KG T ++ + +++A FK
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 173/403 (42%), Gaps = 29/403 (7%)
Query: 84 RKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRV-RGLESAESYFQNLSDSDK---- 138
+ RF A+++ + M SKG+ D LI + R A+ Y L D K
Sbjct: 281 KGRFKAAIELLDHMKSKGV----DADVCTYNMLIHDLCRSNRIAKGYLL-LRDMRKRMIH 335
Query: 139 -TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH--YNNIMSLYTRTEQHEKVPD 195
E + L+N + G V + + +M G +SP H +N ++ + ++
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALK 394
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
+ MM+ G++P SY + L+ ++ + +++ G + V +TY+ + +
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRITYTGMIDGL 453
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK----KKDMMRLWKLQKDNCK 311
K G D+A++ L + D V Y+ +I+ + +G+ K+ + R++++
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS--- 510
Query: 312 KQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
Y T++ ++G L+EA ++ L G+T D N+L+ + G + +AE
Sbjct: 511 -PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
+R M G P S+ + +G+ KAF F E V G P S+
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV-----GHHPTFFTYGSL 624
Query: 432 LSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRCG 473
L + + E E F+ SL V +++ MY +L+ + G
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 170/430 (39%), Gaps = 73/430 (16%)
Query: 90 ALQVSEWMSSKGLCPILPGDRAVQL-----ELIGRVRGLESAESYFQNLS-DSDKTEKVH 143
AL+ +W+ + P L D VQL ++ R R + A + LS S K+ V
Sbjct: 93 ALKFLKWVVKQ---PGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF 149
Query: 144 GALLNCYVMA-----------------GSVDKSLSQMQKMKDMGFVSPLHY--NNIMSLY 184
GAL+ Y + G + SL + M GF +P Y N I+
Sbjct: 150 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSV 208
Query: 185 TRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVD 244
++ + V L M + + PD+ ++ I +N A E L++K+E G A
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG-YAPT 267
Query: 245 WMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK 304
+TY+TV ++Y K G A+ L + K D YN +I L + + + +
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH---DLCRSNRIAKGYL 324
Query: 305 LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKG 364
L +D K+ ++ +T N L+ G+S +G
Sbjct: 325 LLRDMRKRMIHPNEVTY--------------------------------NTLINGFSNEG 352
Query: 365 LIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPK 424
+ A +L M+ G +P +++ + GH+++ N ++A + F + E KG P
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-----YMMEAKGLTPS 407
Query: 425 SDVVSSILSWVTDNRDIEEVEDFVNSLKK-VMSMNRDMYLSLIKLYVRCG--REVDGVLE 481
+L + N + + F +K+ + + R Y +I + G E +L
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 482 SMKADNIELD 491
M D I+ D
Sbjct: 468 EMSKDGIDPD 477
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 3/262 (1%)
Query: 153 AGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG V ++ M+ M G + + + ++ +++ Y + + K V M + G P F+
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y L L EK L+ + AVD + Y+T+ K+G KA+ +
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAV-PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR-EYITMLGCLVKLGD 330
++ D+ Y +IS GK + K + N+ Y + + K G
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 331 LEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSI 390
+ Q + G+T D N ++ GYSR G IEK +L M ++ P +++I
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 391 IASGHVAKENMEKAFQCFKEAL 412
+ G+ ++++ +F ++ +
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSII 821
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 155/369 (42%), Gaps = 47/369 (12%)
Query: 124 ESAESYFQNLSDS--DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHY---- 177
+SA F + D+ TEK++ LL Y G V+K+L ++MK G SP Y
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG-CSPTVYTYTE 308
Query: 178 ---------------------------------NNIMSLYTRTEQHEKVPDVLAMMKEDG 204
NN+M++ + + E++ +V + M
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 368
Query: 205 VSPDIFSYRICLNS-YGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
+P + SY + + + +++ + + +K++ + ++ TYS + + Y K +K
Sbjct: 369 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPSEFTYSILIDGYCKTNRVEK 427
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
AL+ L++ ++K + AY +I+ + + L+K K+N +R Y M+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 324 CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
K G L EA L + + G+ D N L+ G + G+I +A ++LR M + G
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 384 TPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
NS +II +G +A + F+ ++ G +P +++L EE
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFE-----TIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 444 VEDFVNSLK 452
+ +K
Sbjct: 603 AARMMREMK 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 247 TYSTVANFYVKAGLKDKAL-IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKL 305
TY++V ++ G +K +Y + C + D + Y+ +IS Y LG+ +RL+
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 306 QKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGL 365
KDNC + + Y T+LG K+G +E+A L + + +G + L+ G + G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 366 IEKAETMLRSMVDKGKTP 383
+++A + M+ G TP
Sbjct: 319 VDEAYGFYKDMLRDGLTP 336
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 25/342 (7%)
Query: 70 RDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESY 129
R Q+L+ V LRT SEW K + P + ++ + ++ ++ A+S+
Sbjct: 199 RQQKLEDAVLFLRT----------SEW---KDIGPSVVSFNSI-MSGYCKLGFVDMAKSF 244
Query: 130 FQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYT 185
F + V H L+N + GS+ ++L M G V P + YN + +
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG-VEPDSVTYNILAKGFH 303
Query: 186 RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDW 245
+V+ M + G+SPD+ +Y I L +++ LL+ + + G
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 246 MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKL 305
+ S + + K G D+AL + + D VAY+ +I LGK M LW L
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD--MALW-L 420
Query: 306 QKDNCKKQL---NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSR 362
+ C K++ +R + +L L + G L EA LL SG T D + NI++ GY++
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G IE+A + + +++ G TP+ +++ + G+ +N+ +A
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 52/364 (14%)
Query: 167 KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE 226
KD+G S + +N+IMS Y + + + + G+ P ++S+ I +N +
Sbjct: 216 KDIG-PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM 286
+L + G + D +TY+ +A + G+ A ++ DK D + Y +
Sbjct: 275 EALELASDMNKHG-VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 287 ISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI----TMLGCLVKLGDLEEAEKLLGQWE 342
+ LG DM + L KD + I ML L K G ++EA L Q +
Sbjct: 334 LCGQCQLGNI-DMGLV--LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 343 LSGNTYDFK------------------------------VPN-----ILLIGYSRKGLIE 367
G + D +PN LL+G +KG++
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 368 KAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDV 427
+A ++L S++ G+T ++I+ G+ +E+A + FK + G P
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI-----ETGITPSVAT 505
Query: 428 VSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRCG--REVDGVLESMK 484
+S++ ++I E ++ +K ++ + Y +L+ Y CG + +D + MK
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 485 ADNI 488
A+ I
Sbjct: 566 AEGI 569
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ 306
TYSTV + + + A+++L+ E K V++N ++S Y LG DM + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV-DMAKSFFCT 247
Query: 307 KDNCK--KQLNREYITMLG-CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
C + I + G CLV G + EA +L G D NIL G+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLV--GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G+I A ++R M+DKG +P +++I+ G N++ K+ L+ +G+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS-----RGFEL 360
Query: 424 KSDVVSSI-LSWVTDNRDIEEVEDFVNSLK 452
S + S+ LS + I+E N +K
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 179/425 (42%), Gaps = 28/425 (6%)
Query: 88 TQALQVSEWMSSKGLCP--ILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV--H 143
+AL+++ M+ G+ P + A L+G + G A +++ D + V +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG---AWEVIRDMLDKGLSPDVITY 330
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFV--SPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
LL G++D L ++ M GF S + + ++S +T + ++ + MK
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
DG+SPD+ +Y I ++ + L +++ + I + T+ + + G+
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM-CDKRILPNSRTHGALLLGLCQKGML 449
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+A L D V YN +I YA G ++ + L+K+ + + ++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ K ++ EA K+L +L G L+ Y+ G + + + R M +G
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 382 TPTPNSWSIIASG-----------HVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
PT ++S+I G HV + E+ F+ K+ L + E++G P ++
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIFEKCKQGLRDM-ESEGIPPDQITYNT 625
Query: 431 ILSWVTDNRDIEEVEDFVNSLK-KVMSMNRDMYLSLIKLYVRCG--REVDGVLESMKADN 487
I+ ++ + + F+ +K + + + Y LI G R+ D + S++ N
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 488 IELDE 492
+ L +
Sbjct: 686 VSLSK 690
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 25/342 (7%)
Query: 70 RDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESY 129
R Q+L+ V LRT SEW K + P + ++ + ++ ++ A+S+
Sbjct: 199 RQQKLEDAVLFLRT----------SEW---KDIGPSVVSFNSI-MSGYCKLGFVDMAKSF 244
Query: 130 FQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYT 185
F + V H L+N + GS+ ++L M G V P + YN + +
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG-VEPDSVTYNILAKGFH 303
Query: 186 RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDW 245
+V+ M + G+SPD+ +Y I L +++ LL+ + + G
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 246 MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKL 305
+ S + + K G D+AL + + D VAY+ +I LGK M LW L
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD--MALW-L 420
Query: 306 QKDNCKKQL---NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSR 362
+ C K++ +R + +L L + G L EA LL SG T D + NI++ GY++
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G IE+A + + +++ G TP+ +++ + G+ +N+ +A
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 52/364 (14%)
Query: 167 KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE 226
KD+G S + +N+IMS Y + + + + G+ P ++S+ I +N +
Sbjct: 216 KDIG-PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM 286
+L + G + D +TY+ +A + G+ A ++ DK D + Y +
Sbjct: 275 EALELASDMNKHG-VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 287 ISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI----TMLGCLVKLGDLEEAEKLLGQWE 342
+ LG DM + L KD + I ML L K G ++EA L Q +
Sbjct: 334 LCGQCQLGNI-DMGLV--LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 343 LSGNTYDFK------------------------------VPN-----ILLIGYSRKGLIE 367
G + D +PN LL+G +KG++
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 368 KAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDV 427
+A ++L S++ G+T ++I+ G+ +E+A + FK + G P
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI-----ETGITPSVAT 505
Query: 428 VSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRCG--REVDGVLESMK 484
+S++ ++I E ++ +K ++ + Y +L+ Y CG + +D + MK
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 485 ADNI 488
A+ I
Sbjct: 566 AEGI 569
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ 306
TYSTV + + + A+++L+ E K V++N ++S Y LG DM + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV-DMAKSFFCT 247
Query: 307 KDNCK--KQLNREYITMLG-CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
C + I + G CLV G + EA +L G D NIL G+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLV--GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G+I A ++R M+DKG +P +++I+ G N++ K+ L+ +G+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS-----RGFEL 360
Query: 424 KSDVVSSI-LSWVTDNRDIEEVEDFVNSLK 452
S + S+ LS + I+E N +K
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 179/425 (42%), Gaps = 28/425 (6%)
Query: 88 TQALQVSEWMSSKGLCP--ILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV--H 143
+AL+++ M+ G+ P + A L+G + G A +++ D + V +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG---AWEVIRDMLDKGLSPDVITY 330
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFV--SPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
LL G++D L ++ M GF S + + ++S +T + ++ + MK
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
DG+SPD+ +Y I ++ + L +++ + I + T+ + + G+
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM-CDKRILPNSRTHGALLLGLCQKGML 449
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+A L D V YN +I YA G ++ + L+K+ + + ++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ K ++ EA K+L +L G L+ Y+ G + + + R M +G
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 382 TPTPNSWSIIASG-----------HVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
PT ++S+I G HV + E+ F+ K+ L + E++G P ++
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIFEKCKQGLRDM-ESEGIPPDQITYNT 625
Query: 431 ILSWVTDNRDIEEVEDFVNSLK-KVMSMNRDMYLSLIKLYVRCG--REVDGVLESMKADN 487
I+ ++ + + F+ +K + + + Y LI G R+ D + S++ N
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 488 IELDE 492
+ L +
Sbjct: 686 VSLSK 690
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 172/401 (42%), Gaps = 15/401 (3%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
++ L ++ +A +V M GL P R++ +E + +E+ E F ++
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET-EKVFSDMRSR 369
Query: 137 DKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP-LHYNNIMSLYTRTEQHEKV 193
D + ++++ + +G++DK+L +K+ G + + Y ++ Y R
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
++ M + G + D+ +Y L+ R L +KL ++ TE + D T + + +
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILID 488
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQ 313
+ K G A+ +K ++K + D V YN ++ + +G +W D K+
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA---DMVSKE 545
Query: 314 L---NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
+ Y ++ L G L EA ++ + + N ++ GY R G E
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
+ L M+ +G P S++ + G V +ENM KAF K+ + E G P +S
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK---MEEEQGGLVPDVFTYNS 662
Query: 431 ILSWVTDNRDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYV 470
IL ++E E + + ++ ++ +R Y +I +V
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 165/419 (39%), Gaps = 61/419 (14%)
Query: 37 NRRNLYSRISPLGDPSLSVVPVL---ENWLQEGHAVRDQ---ELQRIVKTLRTRKRFTQA 90
N RN R++PL +VV VL N L G DQ T +
Sbjct: 68 NVRNHLIRLNPL-----AVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHI 122
Query: 91 LQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCY 150
L S +S C + R ++ + R+ + S +S F N +D V L+ Y
Sbjct: 123 LVRSGRLSDAQSCLL----RMIRRSGVSRLEIVNSLDSTFSNCGSNDS---VFDLLIRTY 175
Query: 151 VMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM---------------------------SL 183
V A + ++ ++ GF + N + ++
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 184 YT---------RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
YT + + EKV L+ ++E GV PDI +Y +++Y ++ +E +L+
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ +G + TY+TV N K G ++A + D+ Y ++
Sbjct: 296 MPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC--- 351
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYI---TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFK 351
KK D++ K+ D + + + + +M+ + G+L++A + +G D
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 352 VPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ IL+ GY RKG+I A + M+ +G +++ I G ++ + +A + F E
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
M+ L K G +E+ L Q + G D N L+ YS KGL+E+A ++ +M KG
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRD 440
+P +++ + +G E+A + F E L G P S S+L D
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEML-----RSGLSPDSTTYRSLLMEACKKGD 355
Query: 441 IEEVEDFVNSLKKVMSMNRDM------YLSLIKLYVRCG 473
+ E E + ++ +RD+ + S++ L+ R G
Sbjct: 356 VVETEKVFSDMR-----SRDVVPDLVCFSSMMSLFTRSG 389
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 13/314 (4%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ +L+ Y G ++++ + +K+ V+ H Y +M Y RT Q V M
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
E GV + +N Y L E++ ++ + + D TY+T+ + Y +AG
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI-- 319
D+AL + K + YN ++ Y+ +G D++ LWK+ K+ +N + I
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM---LKRGVNADEISC 474
Query: 320 -TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
T+L L KLGD EA KL G D N+++ G + + +A+ +L ++
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDN 438
P ++ ++ G+ N+++AF A+ E KG P ++ ++++S
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAF-----AVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 439 RDIEEVEDFVNSLK 452
R + +V D V L+
Sbjct: 590 RHLNKVADLVIELR 603
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
VSPD+F+ I +N+Y +++ ++ E+ + ++ +TY+++ N Y G +
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGC 324
L+ ++ R+ V Y +I Y G ++ +++L K+ Y ++
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 325 LVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPT 384
+ G + +A ++ G + + N L+ GY + G + +AE + M D P
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 385 PNSWSIIASGHVAKENMEKAFQ-----CFKEAL 412
++++ + G+ +++A + C KE +
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 148/344 (43%), Gaps = 49/344 (14%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ AL+N Y G V + + M+ + +N +M R + K +L M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
++G+SPDI SY + ++ + KLL + DI D +T++ + N + K G
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF-DIEPDCLTFTAIINAFCKQGKA 492
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK----------------- 304
D A +L K D V +I +GK +D + + +
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 305 --LQKDNCK--------KQLNR--------EYITMLGCLVKLGDLEEAEKLLGQWELSG- 345
+ CK ++N+ Y T++ L++ GD+ + ++L +LSG
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 346 --NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEK 403
N Y + I++ G + G +E+AE +L +M D G +P +++++ G+V +++
Sbjct: 613 LPNVYPY---TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 404 AFQCFKEALAVLAENKGWRPKSDVVSSIL-SWVTDNRDIEEVED 446
A E + + E +G+ + SS+L +V + I+ E+
Sbjct: 670 AL----ETVRAMVE-RGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y ++SL R +K +V M GVS +FSY +N+YG E +LL++++
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYL-KKCEDKAYKRDAVAYNHMISHYASLGK 295
E I+ +TY+TV N + GL + L+ L + + + D V YN ++S A G
Sbjct: 204 NE-KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
+ +++ D Y ++ KL LE+ LLG+ G+ D N+
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
LL Y++ G I++A + M G TP N++S++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 11/326 (3%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
+ K R + ++L++ ++M + C + + L+GR L+ F +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 137 DKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTE-QHE 191
+ V + AL+N Y G + SL + +MK+ +SP L YN +++ R E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK-ISPSILTYNTVINACARGGLDWE 229
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
+ + A M+ +G+ PDI +Y L++ R L + +++ + +G I D TYS +
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG-LGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 252 ANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNC 310
+ K +K L + D +YN ++ YA G K+ M ++ ++Q C
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
N Y +L + G ++ +L + + S D NIL+ + G ++
Sbjct: 349 TPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 371 TMLRSMVDKGKTPTPNSWS--IIASG 394
T+ MV++ P ++ I A G
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACG 433
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 160/387 (41%), Gaps = 47/387 (12%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMM 200
+ LL+ + G D++ + M D G V L Y++++ + + + EKV D+L M
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
G PDI SY + L +Y ++ + +++ G + TYS + N + ++G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGR 367
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYI 319
D + + DA YN +I + G K+++ L+ + ++N + +
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 320 TMLGCLVKLGDLEEAEKLL----------------------GQWEL-------------S 344
+ C K G E+A K+L GQ L
Sbjct: 428 IIFAC-GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G+ + + LL ++R GL++++E +L +VD G ++++ + E+A
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 405 FQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM-YL 463
+ + V E P + ++LS + R ++E + +K + M Y
Sbjct: 547 VKTY-----VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYC 601
Query: 464 SLIKLYVRCGR--EVDGVLESMKADNI 488
++ +Y + R +V+ +LE M ++ +
Sbjct: 602 MMLAVYGKTERWDDVNELLEEMLSNRV 628
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 42/326 (12%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ ++N Y G +DK ++ MK G + Y +I+ L R + + + + M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G+ PD Y ++ + R D+ K ++ + DI D +TY+ + + + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDM 402
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK----------------L 305
+A + K + D+V + +I+ Y G KD R+ L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 306 QKDNCKK-------QLNRE------------YITMLGCLVKLGDLEEAEKLLGQWELSGN 346
CK+ +L E Y +++ L K G++EEA KL+G++E +G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
D L+ Y + G ++KA+ +L+ M+ KG PT +++++ +G +E +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 407 CFKEALAVLAENKGWRPKSDVVSSIL 432
LA KG P + +S++
Sbjct: 583 LLNWMLA-----KGIAPNATTFNSLV 603
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 74 LQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRV--RG-LESAESYF 130
L RI K + F++ M +G+ P D V LI RG + +A +F
Sbjct: 326 LCRICKLAEAEEAFSE-------MIRQGILP----DTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 131 QNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRT 187
+ D T V + A+++ + G + ++ +M G + + +++ Y +
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 188 EQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMT 247
+ V M + G SP++ +Y ++ DL++ +LL ++ G + + T
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG-LQPNIFT 493
Query: 248 YSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQK 307
Y+++ N K+G ++A+ + + E D V Y ++ Y G +M + ++ K
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG---EMDKAQEILK 550
Query: 308 DNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKG 364
+ K L +T ++ G LE+ EKLL G + N L+ Y +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 365 LIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
++ A + + M +G P ++ + GH NM++A+ F+E
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 135/313 (43%), Gaps = 16/313 (5%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ + + ++ +L +M+ G +PD+ SY +N Y +L+ + KL+E ++
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+G + + Y ++ + +A + + D V Y +I + K+
Sbjct: 309 RKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC---KR 364
Query: 297 KDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
D+ K + + + + Y ++ ++GD+ EA KL + G D
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
L+ GY + G ++ A + M+ G +P +++ + G + +++ A + E
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 414 VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRD--MYLSLIKLYVR 471
+ G +P +SI++ + + +IEE V + +N D Y +L+ Y +
Sbjct: 485 I-----GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCK 538
Query: 472 CGREVDGVLESMK 484
G E+D E +K
Sbjct: 539 SG-EMDKAQEILK 550
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 240 DIAVDW--MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
++ V W +Y+ V +F + G +A L E K Y D ++Y+ +++ Y G+
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
+ +L ++ K K + Y +++G L ++ L EAE+ + G D V L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAE 417
G+ ++G I A M + TP +++ I SG +M +A + F E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC---- 414
Query: 418 NKGWRPKSDVVSSILS 433
KG P S + +++
Sbjct: 415 -KGLEPDSVTFTELIN 429
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 42/326 (12%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ ++N Y G +DK ++ MK G + Y +I+ L R + + + + M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G+ PD Y ++ + R D+ K ++ + DI D +TY+ + + + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDM 402
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK----------------L 305
+A + K + D+V + +I+ Y G KD R+ L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 306 QKDNCKK-------QLNRE------------YITMLGCLVKLGDLEEAEKLLGQWELSGN 346
CK+ +L E Y +++ L K G++EEA KL+G++E +G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
D L+ Y + G ++KA+ +L+ M+ KG PT +++++ +G +E +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 407 CFKEALAVLAENKGWRPKSDVVSSIL 432
LA KG P + +S++
Sbjct: 583 LLNWMLA-----KGIAPNATTFNSLV 603
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 74 LQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRV--RG-LESAESYF 130
L RI K + F++ M +G+ P D V LI RG + +A +F
Sbjct: 326 LCRICKLAEAEEAFSE-------MIRQGILP----DTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 131 QNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRT 187
+ D T V + A+++ + G + ++ +M G + + +++ Y +
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 188 EQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMT 247
+ V M + G SP++ +Y ++ DL++ +LL ++ G + + T
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG-LQPNIFT 493
Query: 248 YSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQK 307
Y+++ N K+G ++A+ + + E D V Y ++ Y G +M + ++ K
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG---EMDKAQEILK 550
Query: 308 DNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKG 364
+ K L +T ++ G LE+ EKLL G + N L+ Y +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 365 LIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
++ A + + M +G P ++ + GH NM++A+ F+E
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 135/313 (43%), Gaps = 16/313 (5%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ + + ++ +L +M+ G +PD+ SY +N Y +L+ + KL+E ++
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+G + + Y ++ + +A + + D V Y +I + K+
Sbjct: 309 RKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC---KR 364
Query: 297 KDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
D+ K + + + + Y ++ ++GD+ EA KL + G D
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
L+ GY + G ++ A + M+ G +P +++ + G + +++ A + E
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 414 VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRD--MYLSLIKLYVR 471
+ G +P +SI++ + + +IEE V + +N D Y +L+ Y +
Sbjct: 485 I-----GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCK 538
Query: 472 CGREVDGVLESMK 484
G E+D E +K
Sbjct: 539 SG-EMDKAQEILK 550
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 240 DIAVDW--MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
++ V W +Y+ V +F + G +A L E K Y D ++Y+ +++ Y G+
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
+ +L ++ K K + Y +++G L ++ L EAE+ + G D V L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAE 417
G+ ++G I A M + TP +++ I SG +M +A + F E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC---- 414
Query: 418 NKGWRPKSDVVSSILS 433
KG P S + +++
Sbjct: 415 -KGLEPDSVTFTELIN 429
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ L+ + D L+ Q+M+++G+ +H + ++ + + + + +L MK
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ DI Y +C++S+G ++ K +IE G + D +TY+++ KA
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRL 289
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
D+A+ + E AYN MI Y S GK + L + Q+ Y +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
L CL K+G ++EA K+ + + + NIL+ R G ++ A + SM G
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
P + +I+ + +++A F+E + K P S++ + +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEM-----DYKVCTPDEITFCSLIDGLGK---V 460
Query: 442 EEVEDFVNSLKKVMS----MNRDMYLSLIKLYVRCGREVDG 478
V+D +K++ N +Y SLIK + GR+ DG
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 129/304 (42%), Gaps = 36/304 (11%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
+ +L C G VD++L ++MK + YN ++ + R + + ++ M++
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G+ P++ + I ++ L+ + E+++ + D +T+ ++ + K G D
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK-VCTPDEITFCSLIDGLGKVGRVD 464
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLN------ 315
A +K D + +++ Y +I ++ + G+K+D +++K + NC L
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 316 ----------------------------REYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
R Y ++ L+K G E +L + G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D + NI++ G+ + G + KA +L M KG PT ++ + G + +++A+
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 408 FKEA 411
F+EA
Sbjct: 645 FEEA 648
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 144/341 (42%), Gaps = 15/341 (4%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL--ELIGRVRGLESAESYFQNLS 134
++ L + A ++ + M GL P R V + + + + + L+ A + F+ +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGL---FPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 135 DSDKT--EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHE 191
T E +L++ G VD + +KM D + + Y +++ + + E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 192 KVPDVLAMMKEDGVSPDI---FSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTY 248
+ M SPD+ +Y C+ G + E + E+I+ + D +Y
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG---EPEKGRAMFEEIKARRFVP-DARSY 555
Query: 249 STVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKD 308
S + + +KAG ++ +++ D AYN +I + GK +L + K
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 309 NCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEK 368
+ Y +++ L K+ L+EA L + + + + + L+ G+ + G I++
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 369 AETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
A +L ++ KG TP +W+ + V E + +A CF+
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 142/340 (41%), Gaps = 11/340 (3%)
Query: 117 IGRVRGLESAESYFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP 174
+G+V ++ A ++ + DSD V+ +L+ + G + + M +
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 175 LHY-NNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
L N M + + EK + +K PD SY I ++ +L
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
++ +G + +D Y+ V + + K G +KA L++ + K ++ V Y +I A +
Sbjct: 577 SMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 294 GKKKDMMRLWKLQKDNCKKQLNRE-YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
+ + L++ K + +LN Y +++ K+G ++EA +L + G T +
Sbjct: 636 DRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
N LL + I +A +SM + TP ++ I+ +G KAF ++E
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE-- 752
Query: 413 AVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLK 452
+ +G +P + ++++S + +I E + K
Sbjct: 753 ---MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/292 (17%), Positives = 128/292 (43%), Gaps = 7/292 (2%)
Query: 105 ILPGDRAVQLELIGRVRGLESAESY--FQNLSDSDKT--EKVHGALLNCYVMAGSVDKSL 160
+P R+ + + G ++ + E+Y F ++ + + + +++ + G V+K+
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 161 SQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY 219
+++MK GF + + Y +++ + ++ ++ + K + ++ Y ++ +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 220 GARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRD 279
G ++ +LE++ +G + + T++++ + VKA ++AL+ + ++ +
Sbjct: 668 GKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 280 AVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLG 339
V Y +I+ + K W+ + K Y TM+ L K G++ EA L
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 340 QWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
+++ +G D N ++ G S A ++ +G P N ++
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG-LPIHNKTCVV 837
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
AL++C+V G + ++ ++M G +SP + Y +++ + + Q +K +L +M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G P+I ++ I +N Y + +++ +L K+ G +A D +TY+T+ + + G +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLE 439
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITM 321
A ++ + + D V+Y ++ G+ + + ++ K++K + + I +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
G + +++A L L G D K NI++ G +KG + +A+ + R M + G
Sbjct: 500 HG-MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
+P +++I+ H+ + + K+ + +E + G+ + V ++ ++D R
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEE-----IKRCGFSVDASTVKMVVDMLSDGR 611
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 12/272 (4%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM---MK 201
L+N + G V ++L + +M +MG L N +L + KV D + + M
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN--ALVNGLCLNGKVSDAVLLIDRMV 204
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
E G P+ +Y L +LL K+E E I +D + YS + + K G
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT- 320
D A + E K +K D + Y +I + G+ D KL +D K+++ + +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG---AKLLRDMIKRKITPDVVAF 320
Query: 321 --MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
++ C VK G L EAE+L + G + D L+ G+ ++ ++KA ML MV
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
KG P +++I+ +G+ ++ + F++
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 117/292 (40%), Gaps = 39/292 (13%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNS---------------- 218
+ ++ + S+ RT+Q++ V D+ M+ G++ ++++ I +N
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 219 ---YGARSDLENMEKLLEKIETEGDIA-----VDWM----------TYSTVANFYVKAGL 260
G D L+ + EG ++ VD M T + + N G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
A++ + + + ++ + V Y ++ G+ M L + ++ K +Y
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ L K G L+ A L + E+ G D + L+ G+ G + +LR M+ +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
TP ++S + V + + +A + KE + +G P + +S++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMI-----QRGISPDTVTYTSLI 359
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 164/388 (42%), Gaps = 45/388 (11%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMG-FVSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
V AL + + G +++++ KMK F N ++ + + + + V M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
G P +F+Y I ++ D+E L E+++ G + D +TY+++ + + K G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNSMIDGFGKVGR 312
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDN----------- 309
D + + ++ +D + D + YN +I+ + GK + ++ K N
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 310 -----CKKQLNRE-------------------YITMLGCLVKLGDLEEAEKLLGQWELSG 345
CK+ + ++ Y +++ K+G+L +A +L + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
++ L+ G +++AE + M G P S++ + G V +NM++A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 406 QCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLS 464
+ E + +G +P + + + + IE + +N +K+ + N +Y +
Sbjct: 493 ELLNE-----LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 465 LIKLYVRCGREVDG--VLESMKADNIEL 490
L+ Y + G +G +L+ MK +IE+
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEV 575
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 200/487 (41%), Gaps = 53/487 (10%)
Query: 45 ISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCP 104
I LG+ + V +L ++ + L + L +++ + AL E M + G P
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 105 ILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALL--NCYVMAGSVDKSLSQ 162
LP ++ + + +E S + + D V L+ N D + +
Sbjct: 511 -LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 163 MQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGA 221
+ M+++G + Y++I+ + + + + A M E G+ PD +Y I +N+Y
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 222 RSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV 281
++ +L+E++ + + TY+ + + +VK G+ +K YL K + + V
Sbjct: 630 NGRIDEANELVEEV-VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCL-------------VKL 328
Y +I H+ G K L+ L +N K + YIT+L L V+
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 329 GDLEEAEKL------------LGQW-------ELSGNTYDFKVPNI-----LLIGYSRKG 364
G + ++L LG + E+ G +PN+ ++ GY G
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808
Query: 365 LIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPK 424
+++A L SM +G P +++I+ H+ ++E A F E P
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF--------EGTNCEPD 860
Query: 425 SDVVSSILSWVTD-NRDIEEVEDFVNSLKKVMSMNRDMYLSLIK--LYVRCGREVDGVLE 481
+ S++L + D R ++ + + K ++ N+D Y L++ Y R E V++
Sbjct: 861 QVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVK 920
Query: 482 SMKADNI 488
M A +I
Sbjct: 921 DMAALDI 927
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 22/303 (7%)
Query: 173 SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
SP +N+++S Y Q+E + M EDGV PD F++ L + G ++ E +
Sbjct: 159 SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH 218
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
+ EG D + + Y K G KA + D +D V++N M++ Y
Sbjct: 219 RDLVKEG-FGYDVYVLNALVVMYAKCGDIVKA----RNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 293 LGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
G + + +++L N + + + + L ++ + +L G G ++ V
Sbjct: 274 HGLLHEALDIFRLMVQN---GIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
N L++ YS++G + +A + M+++ SW+ I S H N K F+ A
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTV----SWNAIISAHSKNSNGLKYFEQMHRAN 386
Query: 413 AVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYV 470
A +P S+LS + +E+ E + + K ++ M Y ++ LY
Sbjct: 387 A--------KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYG 438
Query: 471 RCG 473
R G
Sbjct: 439 RAG 441
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 174/427 (40%), Gaps = 62/427 (14%)
Query: 72 QELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQ 131
Q+L I++ R+ +Q+ EWM G I + ++ +G + + A +Q
Sbjct: 99 QDLNVILRDFGISGRWQDLIQLFEWMQQHG--KISVSTYSSCIKFVG-AKNVSKALEIYQ 155
Query: 132 NLSDSDKTEKVH--GALLNCYVMAGSVDKSLSQMQKMKDMGF------------------ 171
++ D V+ ++L+C V G +D + +MK G
Sbjct: 156 SIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 172 -------------------VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
+ + Y ++++ + E+ + + MK +G SP+I+ Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
LNSY + D + ++L+ ++++ G + M +T+ Y+K GL D++ L + E
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM-TTLLKVYIKGGLFDRSRELLSELE 334
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE 332
Y + + Y ++ + GK ++ ++ K + M+ L + +
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFK 394
Query: 333 EAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIA 392
EA++L E + D + N +L Y R G +E M++ M ++ +P N++ I+
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 393 SGHVAKENMEKAFQCFKEALAVLA-------ENKGWRPKSDVVSSILSWVTDNRDIEEVE 445
K F KE L +LA +KG R + ++ SS++ + R E
Sbjct: 455 ----------KYF--IKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF 502
Query: 446 DFVNSLK 452
N L+
Sbjct: 503 SVYNMLR 509
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 141/331 (42%), Gaps = 12/331 (3%)
Query: 176 HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKI 235
H N+ ++ + + ++ D L+ ++ + + L +G +++ +L E +
Sbjct: 65 HSNSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWM 124
Query: 236 ETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK 295
+ G I+V TYS+ F V A KAL + D++ K + N ++S GK
Sbjct: 125 QQHGKISVS--TYSSCIKF-VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGK 181
Query: 296 KKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPN 354
++L+ ++++D K + + GC+ +A +L+G+ +G D +
Sbjct: 182 LDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYG 241
Query: 355 ILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAV 414
+L + G E+AE ++ M +G +P +S + + + K + +KA + E ++
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 415 LAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM-YLSLIKLYVRCG 473
G P +++++L + + ++ L+ +M Y L+ + G
Sbjct: 302 -----GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Query: 474 R--EVDGVLESMKADNIELDEEMEEILNSRL 502
+ E + + MK + D I+ S L
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISAL 387
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 21/381 (5%)
Query: 121 RGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKS--LSQMQKMKDMGFVSPLH-Y 177
R ++ A F + D + V + + GS KS L+ +++M++ G +H Y
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 178 NNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIET 237
++ + EK ++L M E G+ P++ +Y +N Y R +E+ ++E +E+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 238 EGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
++ + TY+ + Y K+ + KA+ L K ++ D V YN +I G
Sbjct: 422 R-KLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
RL L D Y +M+ L K +EEA L E G + + L+
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAE 417
GY + G +++A ML M+ K P +++ + G A +++ A L E
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE---------ATLLE 590
Query: 418 NK----GWRPKSDVVSSILSWVTDNRDIEEV-EDFVNSLKKVMSMNRDMYLSLIKLYVRC 472
K G +P + ++ + + D + F L + Y + I+ Y R
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 473 GREVDG--VLESMKADNIELD 491
GR +D ++ M+ + + D
Sbjct: 651 GRLLDAEDMMAKMRENGVSPD 671
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 70/379 (18%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN +++ R +++ V M ED V P+I++Y +N Y ++E + + KI
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI- 244
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
E + D+ TY+++ Y + D A + K +R+ VAY H+I +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 297 KDMMRLW-KLQKDNC--------------------KKQLN--------------REYITM 321
+ M L+ K++ D C + LN Y +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ L E+A +LLGQ G + N L+ GY ++G+IE A ++ M +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 382 TPTPNSWSIIASGHVAKENMEKAF------------------------QC----FKEA-- 411
+P +++ + G+ K N+ KA QC F A
Sbjct: 425 SPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 412 LAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYV 470
L L ++G P +S++ + ++ +EE D +SL +K ++ N MY +LI Y
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 471 RCGR--EVDGVLESMKADN 487
+ G+ E +LE M + N
Sbjct: 544 KAGKVDEAHLMLEKMLSKN 562
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 20/271 (7%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G D + S+ Q+M G H Y + Y R + D++A M+E+GVSPD+F+Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY-VKAGLK---------- 261
+ YG +L+++ G S + + +K G +
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 262 ------DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQL 314
D + L+K + + +A +Y +I +G + +++ +Q++
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
+ +L C KL EA K++ G+ + +L+ G +KG E+ ++ +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
+++ G +W II G V K+ + +AF
Sbjct: 856 NLLQCGYYEDELAWKIIIDG-VGKQGLVEAF 885
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 151/334 (45%), Gaps = 7/334 (2%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMM 200
++ L+ ++ ++ +++MK+ G + YN+++ ++ ++ ++ L M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
E+G+ P+ F+Y ++ Y S+ + +K ++++ G + + + + + N Y K G
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCKKGK 572
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
+A + D+ DA Y +++ K D +++ + Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ KLG++++A + + G T + + N+LL G+ R G IEKA+ +L M KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRD 440
P ++ I G+ ++ +AF+ F E + KG P S V ++++ D
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE-----MKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 441 IEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGR 474
+E + KK + + + +LI + G+
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGK 781
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKED 203
L+N Y G V ++ S + M D G + Y +M+ + ++ + ++ M+
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G++PD+FSY + +N + +++ + +++ EG + + + Y+ + + ++G +K
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-LTPNVIIYNMLLGGFCRSGEIEK 680
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
A L + K +AV Y +I Y G + RL+ K + Y T++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 324 CLVKLGDLEEAEKLLG-----------------QW---------------ELSGNTYD-F 350
+L D+E A + G W L ++D F
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 351 KVPN-----ILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
PN I++ ++G +E A+ + M + PT +++ + +G+ + F
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 406 QCFKEALA 413
F EA+A
Sbjct: 861 PVFDEAIA 868
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 150/356 (42%), Gaps = 12/356 (3%)
Query: 123 LESAESYFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNN 179
+E A++ F + S + + +L+ Y +V + + +MK V SP Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
++ + + +++ M G P++ Y + ++ S + ++L++++ +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
IA D Y+++ KA D+A +L + + K +A Y IS Y +
Sbjct: 483 -IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 300 MRLWKLQKDNCKKQLNREYIT-MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
+ K ++ C N+ T ++ K G + EA G D K +L+
Sbjct: 542 DKYVKEMRE-CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN 418
G + ++ AE + R M KG P S+ ++ +G NM+KA F E +
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-----E 655
Query: 419 KGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLK-KVMSMNRDMYLSLIKLYVRCG 473
+G P + + +L + +IE+ ++ ++ + K + N Y ++I Y + G
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 144/339 (42%), Gaps = 9/339 (2%)
Query: 123 LESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNN 179
++ AE F+ + V +G L+N + G++ K+ S +M + G + + YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
++ + R+ + EK ++L M G+ P+ +Y ++ Y DL +L ++++ +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK---K 296
+ D Y+T+ + + ++A I + K +N +I+ GK K
Sbjct: 728 -LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 297 KDMM-RLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
+++ RL D K + Y M+ L K G+LE A++L Q + +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 415
LL GY + G + + + G P +S+I + + + KA + A
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 416 AENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV 454
A + G + ++LS ++E E + ++ ++
Sbjct: 906 AVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 26/313 (8%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYG--ARSDLENMEKLLEK 234
Y I+ Y+RT ++EK D+ MKE G SP + +Y + L+ +G RS + +L++
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS-WRKILGVLDE 271
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ ++G + D T STV + + GL +A + + + Y+ V YN ++ + G
Sbjct: 272 MRSKG-LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPN 354
+ + + K ++N + Y ++ V+ G +EA ++ G +
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 355 ILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS--GHVAKENMEKAFQCFKEAL 412
++ Y + G ++A + SM + G P +++ + S G ++ N E +
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN---------EMI 441
Query: 413 AVLAENK--GWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSM-----NRDMYLSL 465
+L + K G P +++L+ + N+ +++ FVN + + M +RD + +L
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDK---FVNRVFREMKSCGFEPDRDTFNTL 497
Query: 466 IKLYVRCGREVDG 478
I Y RCG EVD
Sbjct: 498 ISAYGRCGSEVDA 510
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 23/335 (6%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L++ Y GS + +M GF + + YN +++ R +V++ MK G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV--ANFYVKA-GLK 261
P SY + L Y + +E++ +I+ EG I WM T+ ANF +A
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIK-EGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR-----LWKLQKDNCKKQLNR 316
++A KK YK D V +N M+S + + +M L +++D L
Sbjct: 616 ERAFTLFKK---HGYKPDMVIFNSMLSIFT----RNNMYDQAEGILESIREDGLSPDL-V 667
Query: 317 EYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM 376
Y +++ V+ G+ +AE++L E S D N ++ G+ R+GL+++A ML M
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVT 436
++G P +++ SG+ A F ++ + +A+N RP ++
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAM----GMFAEIEDVIECMAKND-CRPNELTFKMVVDGYC 782
Query: 437 DNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVR 471
E DFV+ +K D + + L VR
Sbjct: 783 RAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVR 817
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 157/385 (40%), Gaps = 73/385 (18%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ ++ + + + VL M+E+ D +Y + +Y R+ + ++
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY-VRAGFSKEAAGVIEMM 377
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
T+ + + +TY+TV + Y KAG +D+AL ++ + YN ++S +
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 297 KDMMR-LWKLQKDNCK-------------------KQLNREYITMLGCLV---------- 326
+M++ L ++ + C K +NR + M C
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 327 -----KLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ G +A K+ G+ +G N LL +RKG E ++ M KG
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 382 TPTPNSWSII------ASGHVAKENMEKA--------------------FQCFKEALA-- 413
PT S+S++ ++ E +E F+C ALA
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC--RALAGS 615
Query: 414 ----VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK-VMSMNRDMYLSLIKL 468
L + G++P + +S+LS T N ++ E + S+++ +S + Y SL+ +
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 469 YVRCGR--EVDGVLESMKADNIELD 491
YVR G + + +L++++ ++ D
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPD 700
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 156/339 (46%), Gaps = 13/339 (3%)
Query: 147 LNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGV 205
++ +V A ++K+L +++M+ +G V + + YN ++ Y + E+ ++L M G
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 206 SPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKAL 265
PD SY + + + L++K+ E + D +TY+T+ + K D+AL
Sbjct: 344 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 266 IYLKKCEDKAYKRDAVAYN---HMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
+LK ++K ++ D + Y+ H + + + KD++ L K +C + Y ++
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM-LSKGHCPPDVV-TYTAVV 461
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKT 382
+LG++++A+KLL G+ + LL G R G +A M+ + +
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521
Query: 383 PTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL-SWVTDNRDI 441
P ++S+I G + + +A +E + KG+ P ++ +L S D R
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVL-----KGFFPGPVEINLLLQSLCRDGRTH 576
Query: 442 EEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVL 480
E + L K ++N + ++I + + E+D L
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQ-NDELDAAL 614
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 61/375 (16%)
Query: 166 MKDMG-FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSD 224
MK G + +P ++ +M Y+R Q VL +M+ GV P++ ++ + +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 225 LENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYN 284
LE + LE+++ G I + +TY+ + Y ++A+ L+ K D V+Y
Sbjct: 293 LEKALRFLERMQVVG-IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 285 HMISHYAS---LGKKKDMMR-------------------------------LWKLQKDNC 310
++ + + + +D+M+ LW L KD
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL-KDAQ 410
Query: 311 KKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNT-YDFKVPNILLIGYSRKGLI 366
+K + Y ++ L K G + EA+ L+ + G+ D ++ G+ R G +
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 367 EKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSD 426
+KA+ +L+ M G P S++ + +G +A + + ++E W P S
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE-----MMNMSEEHWWSPNSI 525
Query: 427 VVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVLESMKAD 486
S I+ + + E D V R+M L K + E++ +L+S+ D
Sbjct: 526 TYSVIMHGLRREGKLSEACDVV----------REMVL---KGFFPGPVEINLLLQSLCRD 572
Query: 487 --NIELDEEMEEILN 499
E + MEE LN
Sbjct: 573 GRTHEARKFMEECLN 587
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 134/347 (38%), Gaps = 45/347 (12%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNL-SD 135
IV L R ++A + M SKG CP + R+ ++ A+ Q + +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 136 SDKTEKV-HGALLNCYVMAGSVDKSLS--QMQKMKDMGFVSP--LHYNNIMSLYTRTEQH 190
K V + ALLN G KSL +M M + + SP + Y+ IM R +
Sbjct: 484 GHKPNTVSYTALLNGMCRTG---KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG----------- 239
+ DV+ M G P + L S K +E+ +G
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 240 ----------DIAV-------------DWMTYSTVANFYVKAGLKDKALIYLKKCEDKAY 276
D A+ D TY+T+ + K G +A +KK K
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 277 KRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEK 336
V Y +I Y +GK D++ + L+K +++ Y ++ L LG LEEA+
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAI--LEKMISRQKCRTIYNQVIEKLCVLGKLEEADT 718
Query: 337 LLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
LLG+ + + D K L+ GY +KG+ A + M ++ P
Sbjct: 719 LLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 164/375 (43%), Gaps = 21/375 (5%)
Query: 40 NLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSS 99
NLY+++ + +L V V++ +EG + ++ K + A V E M
Sbjct: 492 NLYTKVGKISK-ALEVSRVMK---EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 100 KGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDK-----TEKVHGALLNCYVMAG 154
+G+ P D + +I G+ + + Q + + K T + +++ Y +G
Sbjct: 548 EGMKP----DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 155 SVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
+ +SL M+ G V +H +N +++ Q EK ++L M GVS + +Y
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
+ Y + D + +++ EG + VD TY + K+G AL K+
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEG-LDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 274 KAYKRDAVAYNHMISHYASLG---KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGD 330
+ R++ YN +I +A G + D+++ +++K+ K ++ Y + + K GD
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQ--QMKKEGVKPDIH-TYTSFISACSKAGD 779
Query: 331 LEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSI 390
+ A + + + E G + K L+ G++R L EKA + M G P +
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 391 IASGHVAKENMEKAF 405
+ + +++ ++ +A+
Sbjct: 840 LLTSLLSRASIAEAY 854
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 157/367 (42%), Gaps = 10/367 (2%)
Query: 111 AVQLELIGRVRGLESAESYFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKD 168
+ ++ GR + A F+ + T +++ +L++ Y + +D++LS ++KMK+
Sbjct: 313 GLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKE 372
Query: 169 MGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLEN 227
G +S + Y+ I+ +++ E K + + Y + ++ ++E
Sbjct: 373 EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMER 432
Query: 228 MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI 287
E L+ ++E EG I Y T+ + Y + K L+ K+ ++ + V Y +I
Sbjct: 433 AEALVREMEEEG-IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
+ Y +GK + + ++ K+ K + Y M+ VKL D A + G
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D + N ++ + G +++A ++ M PT ++ I G+ +M ++ +
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLI 466
F + G P + +++ + + R +E+ + ++ + +S N Y ++
Sbjct: 612 FD-----MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 467 KLYVRCG 473
+ Y G
Sbjct: 667 QGYASVG 673
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 134/292 (45%), Gaps = 12/292 (4%)
Query: 124 ESAESYFQNLSDSDKT--EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNI 180
E+A+ +F KT ++G ++ + +++++ + +++M++ G +P+ Y+ +
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 181 MSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE--KIETE 238
M YT +K V +KE G +P + +Y +N Y + + + K LE ++ E
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY---TKVGKISKALEVSRVMKE 512
Query: 239 GDIAVDWMTYSTVANFYVKAGLKD--KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+ + TYS + N +VK LKD A + + K D + YN++IS + +G
Sbjct: 513 EGVKHNLKTYSMMINGFVK--LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
++ K + + R ++ ++ K GD+ + ++ G N L
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
+ G K +EKA +L M G + ++++ I G+ + + KAF+ F
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 11/344 (3%)
Query: 73 ELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQN 132
+ R+ + K++ L + + M KG+ L ++ + R R L A S
Sbjct: 90 DFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY-TLSIMINCFCRCRKLCLAFSAMGK 148
Query: 133 LS--DSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQ 189
+ + L+N + G V ++L + +M +MG L N +++ + +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 190 HEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYS 249
+ ++ M E G P+ +Y LN +LL K+E E +I +D + YS
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYS 267
Query: 250 TVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDN 309
+ + K G D A + E K + + YN +I + + G+ D KL +D
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG---AKLLRDM 324
Query: 310 CKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLI 366
K+++N +T ++ VK G L EAE+L + G D L+ G+ ++ +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 367 EKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+KA M+ MV KG P +++I+ +G+ ++ + F++
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 136/298 (45%), Gaps = 11/298 (3%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
L++ +V G + ++ ++M G ++P + Y +++ + + +K ++ +M
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G P+I ++ I +N Y + +++ +L K+ G +A D +TY+T+ + + G +
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLN 455
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITM 321
A ++ + + V Y ++ G+ + + ++ K++K + + I +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
G + +++A L L G K NI++ G +KG + +AE + R M + G
Sbjct: 516 HG-MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
P +++I+ H+ + K+ + +E + G+ + + ++ ++D R
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEE-----LKRCGFSVDASTIKMVIDMLSDGR 627
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 140/325 (43%), Gaps = 8/325 (2%)
Query: 157 DKSLSQMQKMKDMGFVSPLHYNNIM-SLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRIC 215
D L+ ++M+ G L+ +IM + + R + + + + G P+ ++
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 216 LNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKA 275
+N + +L++++ G D +T +T+ N +G + +A++ + K +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 276 YKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAE 335
+ +AV Y +++ G+ M L + ++ K +Y ++ L K G L+ A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 336 KLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGH 395
L + E+ G T + NIL+ G+ G + +LR M+ + P ++S++
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 396 VAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL-KKV 454
V + + +A + KE + ++G P + +S++ +++ V+ + K
Sbjct: 344 VKEGKLREAEELHKEMI-----HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 455 MSMNRDMYLSLIKLYVRCGREVDGV 479
N + LI Y + R DG+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGL 423
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 1/236 (0%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+N+++ T H ++ M+ G PD F+Y + ++S ++ L+ +L+++E
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G A +TY+T+ + + KA +A + E R++V YN +I +
Sbjct: 463 LSG-CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
+D +L +K Y ++L + GD+++A ++ +G D L
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
+ G + G +E A +LRS+ KG TP++++ + G K +A F+E L
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++S + Q E+ ++ ++ G+ PD+ ++ + + +L E++
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
++G D TY+ + + G D+AL LK+ E R + YN +I + K
Sbjct: 428 SKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
++ ++ + + + + Y T++ L K +E+A +L+ Q + G D N L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
L + R G I+KA ++++M G P ++ + SG +E A
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y+ +++ R + E+ ++L +MKE G++PD +SY + ++ L+ + LE +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
++G + D + Y+TV K G D+AL K + ++ +YN M S S G K
Sbjct: 396 SDGCLP-DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLL-----GQWELSGNTYDFK 351
+ + N Y +M+ CL + G ++EA +LL ++ S TY
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY--- 511
Query: 352 VPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASG 394
NI+L+G+ + IE A +L SMV G P +++++ G
Sbjct: 512 --NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 12/295 (4%)
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
+L M G +PD+ + + ++ +++E +E G D Y+ + N +
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ--PDVFAYNALINGF 168
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR-LWKLQKDNCKKQL 314
K D A L + K + D V YN MI S GK ++ L +L DNC+ +
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y ++ + G ++EA KL+ + G D N ++ G ++G++++A M+R
Sbjct: 229 -ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSW 434
++ KG P S++I+ + + E+ E L ++ P S +++
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEG-----EKLMTKMFSEKCDPNVVTYSILITT 342
Query: 435 VTDNRDIEEVEDFVNSLK-KVMSMNRDMYLSLIKLYVRCGREVDGV--LESMKAD 486
+ + IEE + + +K K ++ + Y LI + R GR + LE+M +D
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 153/345 (44%), Gaps = 17/345 (4%)
Query: 155 SVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
++ K++ M+ ++ G YN +++ + + + + VL M+ SPD +Y I
Sbjct: 139 NIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
+ S +R L+ K+L ++ ++ + +TY+ + + G D+AL + + +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 275 AYKRDAVAYNHMISHYASLG---KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
K D YN +I G + +M+R L+ C+ + Y +L L+ G
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVR--NLELKGCEPDV-ISYNILLRALLNQGKW 314
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
EE EKL+ + + +IL+ R G IE+A +L+ M +KG TP S+ +
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
+ + ++ A + F E + + G P +++L+ + N ++ + L
Sbjct: 375 IAAFCREGRLDVAIE-FLETMI----SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 452 KKV-MSMNRDMYLSLIKLYVRCG---REVDGVLESMKADNIELDE 492
+V S N Y ++ G R + +LE M ++ I+ DE
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE-MMSNGIDPDE 473
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNN--IMSLYTRTEQHEKVPDVLAMMKED 203
++NC+ + S + K+ +G+ N I L+ + E V ++ M E+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV-LVDRMVEN 187
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G PD+ +Y +N D LL K+E E ++ D TYST+ + + G D
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT--- 320
A+ K+ E K K V YN ++ GK D L KD +++ IT
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL---KDMVSREIVPNVITFNV 303
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
+L VK G L+EA +L + G + + N L+ GY + + +A ML MV
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFK 409
+P +++ + G+ + ++ + F+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 120/270 (44%), Gaps = 8/270 (2%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
LL+ +V G + ++ ++M G +SP + YN +M Y + + ++L +M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
+ SPDI ++ + Y +++ K+ I G +A + +TYS + + ++G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA-NAVTYSILVQGFCQSGKIK 420
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLN-REYIT 320
A ++ D + Y ++ GK + + +++ LQK K L Y T
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS--KMDLGIVMYTT 478
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ + K G +E+A L G + +++ G +KG + +A +LR M + G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
P +++ + H+ ++ + + +E
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 40/330 (12%)
Query: 174 PLHYN---NIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDL---EN 227
P HY+ I L HE + MK G+ PD F+Y + ++ +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 228 MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI 287
+ L K+ E D+ ++ ++ Y K G + Y +K D+ +RD V++N MI
Sbjct: 154 VHSSLFKVGLERDVHIN----HSLIMMYAKCG----QVGYARKLFDEITERDTVSWNSMI 205
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEA---EKLLGQWELS 344
S Y+ G KD M L++ ++ + R ++MLG LGDL E++ ++
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
+T+ + + L+ Y + G ++ A + M+ K + +W+ + + + +A
Sbjct: 266 LSTF---LGSKLISMYGKCGDLDSARRVFNQMIKKDRV----AWTAMITVYSQNGKSSEA 318
Query: 405 FQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE---EVEDFVNSLKKVMSMNRDM 461
F+ F E E G P + +S++LS +E ++E + L S+ ++
Sbjct: 319 FKLFFE-----MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL----SLQHNI 369
Query: 462 YLS--LIKLYVRCGR--EVDGVLESMKADN 487
Y++ L+ +Y +CGR E V E+M N
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMPVKN 399
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 141/300 (47%), Gaps = 13/300 (4%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ + Q + ++LA M + P++ SY ++ + + L ++
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G IA+D ++Y+T+ + Y K G ++AL L++ K+D V YN ++ Y GK
Sbjct: 437 YLG-IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 297 KDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
++ +++ ++++++ L Y T++ K G +EA ++ +++ +G D + +
Sbjct: 496 DEVKKVFTEMKREHVLPNL-LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEK--------AFQC 407
L+ + GL+ A +++ M +G +P +++ I M++ +
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIK 467
AL+ L E +G R + L+ ++NR ++ E+ + L ++ + R M+ IK
Sbjct: 615 SSSALSALTETEGNRVIQ--LFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIK 672
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 142/334 (42%), Gaps = 47/334 (14%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARS-DLENMEKLLEKI 235
++ ++S Y R+ HE+ V MKE G+ P++ +Y +++ G + + + K +++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 236 ETEG----------------------------------DIAVDWMTYSTVANFYVKAGLK 261
+ G I D +Y+T+ + K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR-EYIT 320
D A L + K + V+Y+ +I +A G+ + + L+ + L+R Y T
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG-EMRYLGIALDRVSYNT 449
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
+L K+G EEA +L + G D N LL GY ++G ++ + + M +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVV--SSILSWVTDN 438
P ++S + G+ +K + +KEA+ + E K ++DVV S+++ + N
Sbjct: 510 VLPNLLTYSTLIDGY-SKGGL------YKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 439 RDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYVR 471
+ ++ + K+ +S N Y S+I + R
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
++L AG +++ + K+ + G V+ + YN + S + +Q + D+ MK+D
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G SPDIF+Y I + S+G +++ + E++E D D ++Y+++ N K G D+
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELE-RSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT--- 320
A + K+ ++K D V Y+ ++ + GK + + + L ++ K +T
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECF---GKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYD 349
+L CL K G EA L + + G T D
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%)
Query: 154 GSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G D+++ +M G ++ + YN +M + + + +K V + M E G P+ ++Y
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 213 RICLNSYGARSDLENMEKLLE---KIETEGDIAVDWMTYSTVAN-------------FYV 256
+ LN A L ++ ++E + T+G + T S + + F V
Sbjct: 344 SLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 257 K---------------AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR 301
K AG +A+ L K +K D + YN + +++LGK K +
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV---FSALGKLKQISH 460
Query: 302 LW----KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
+ K++KD + Y ++ ++G+++EA + + E S D N L+
Sbjct: 461 IHDLFEKMKKDGPSPDI-FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAE 417
+ G +++A + M +KG P ++S + E +E A+ F+E L
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV---- 575
Query: 418 NKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK 453
KG +P + +L + N E D + +K+
Sbjct: 576 -KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 111/229 (48%), Gaps = 12/229 (5%)
Query: 174 PLHYNNIMSLYTRT---EQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
P YN I+ + +R+ ++ ++V +L M + V +I + I + +G DL+ +
Sbjct: 133 PFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLR 192
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
L++K D+ ++ TY + Y+++ KA + +K D AYN ++
Sbjct: 193 LVKK----WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD-- 246
Query: 291 ASLGKKKDMMRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYD 349
+L K + ++++ ++K +C++ Y M+ + ++G +EA L + G T +
Sbjct: 247 -ALAKDEKACQVFEDMKKRHCRRD-EYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304
Query: 350 FKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
N L+ ++ +++KA + MV+ G P ++S++ + VA+
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 20/276 (7%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMG-------FVSPLHYNNIMSLYTRTEQHEKVPDVL 197
+LLN Y + +++ + +M +MG F + +H L+ + E V V
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASEAVALVD 214
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M++ G P++ +Y + +N R D + LL K+E I D + ++T+ + K
Sbjct: 215 RMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTIIDSLCK 272
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
D AL K+ E K + + V Y+ +IS S G+ D +L D +K++N
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL---SDMIEKKINPN 329
Query: 318 YIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
+T ++ VK G EAEKL D N L+ G+ ++KA+ M
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
MV K P +++ + G + +E + F+E
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 170/418 (40%), Gaps = 36/418 (8%)
Query: 82 RTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRG--LESAESYFQNLSDSDKT 139
R +R Q V+ + GLC GD + L L+ ++ +E+ F + DS
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCK--RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 140 EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVL 197
+ VD +L+ ++M+ G + P + Y++++S + +L
Sbjct: 273 YR-------------HVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
+ M E ++P++ ++ ++++ EKL + + + I D TY+++ N +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCM 377
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
DKA + K D V YN +I + + +D L++
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y T++ L GD + A+K+ Q G D +ILL G G +EKA + M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
++ + G ++ + F +L++ KG +P ++++S +
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC-SLSL----KGVKPNVVTYNTMISGLCS 552
Query: 438 NRDIEEVEDFVNSLKKVMSM-NRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEM 494
R ++E + +K+ + N Y +LI+ ++R G KA + EL EM
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD---------KAASAELIREM 601
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 149/335 (44%), Gaps = 43/335 (12%)
Query: 134 SDSDKTE-KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNN------------- 179
S++ KT+ +++ ++N YV + S++ S+S +M D GFV + N
Sbjct: 87 SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN 146
Query: 180 -------------IMSLYT---------RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLN 217
++ +Y+ + EK D+L + E G SP++ Y ++
Sbjct: 147 QWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID 206
Query: 218 SYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYK 277
+ ++E + L ++ G +A + TY+ + N K G+K + +K ++
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVA-NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 278 RDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+ YN +++ G+ KD +++ ++ Y T++G L + L EA K+
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 338 LGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
+ Q + G + N L+ G+ G + KA ++ R + +G +P+ +++I+ SG
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 398 KENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
K + A + KE E +G +P S V +IL
Sbjct: 386 KGDTSGAAKMVKE-----MEERGIKP-SKVTYTIL 414
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 140 EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLA 198
E+ + L+N G + +KM++ G L+ YN +M+ + + + V
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
M+E GVS +I +Y + L K++++++++G I + +TY+T+ + +
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG-INPNLITYNTLIDGFCGV 351
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREY 318
G KAL + + + V YN ++S + G ++ K ++ K Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
++ + ++E+A +L E G D ++L+ G+ KG + +A + +SMV+
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
K P ++ + G+ + + +A + KE
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 86 RFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGA 145
R QAL+VS+WM +C ++P D + + +LI V GLE AE YF+++ ++ + E ++ A
Sbjct: 55 RLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTA 114
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYN---NIMSLYTRTEQHEKVPDVLAMMKE 202
LL Y ++ + K + S +H I S TR +KV + L MKE
Sbjct: 115 LLRSY----------AKRSEKKYLDRASRIHIQEDERISSFGTR----DKVDESLREMKE 160
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWM 246
+ D + L Y A SD+ ME+ L + EG + +D M
Sbjct: 161 SNIDLDRLTVNKALRVYAAASDVAAMERFL--ADWEGTVKLDLM 202
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 179/436 (41%), Gaps = 33/436 (7%)
Query: 73 ELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQN 132
+ R++ + K++ + + E M G+ P + L R L A S+
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 133 LSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQ 189
+ + G+LLN + V +L +M MG+ + + YN I+ +++Q
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 190 HEKVPDVLAMMKEDGVSPDIFSYRIC---LNSYGARSDLENMEKLLEKIETEGDIAVDWM 246
+ D+L M++DG+ PD+ +Y L S G SD M + K E D+
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV----F 257
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI---SHYASLGKKKDMMRLW 303
T++ + + VK G +A + ++ ++ D V Y+ +I Y+ L + ++M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF- 316
Query: 304 KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
+ C + Y ++ K +E KL + G + IL+ GY R
Sbjct: 317 -MVSKGCFPDV-VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G + AE + R MV G P +++++ G +EK AL +LA+ +
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK-------ALVILADMQKNGM 427
Query: 424 KSDVVSS--ILSWVTDNRDIEEVEDFVNSLKKVMSM-----NRDMYLSLIKLYVRCGREV 476
+D+V+ I+ + ++ + D SL M M L L K +R RE
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR--REA 485
Query: 477 DGVLESMKADNIELDE 492
D + MK D I +E
Sbjct: 486 DALFRKMKEDGILPNE 501
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 26/279 (9%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM--SLYTRTEQHEKVPDVLAM--- 199
+LLN Y + K +S+ + D FV+ N + +L H K + +A+
Sbjct: 156 SLLNGYCHS----KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M G PD+ +Y + +N R D + LL K+E +G + + Y+T+ + K
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYK 270
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
D AL K+ E K + + V Y+ +IS + G+ D RL D ++++N +
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL---SDMIERKINPDVF 327
Query: 320 T---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI-----LLIGYSRKGLIEKAET 371
T ++ VK G L EAEKL E+ + D P+I L+ G+ +++A+
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYD--EMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
M MV K P +++ + G + +E+ + F+E
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/304 (17%), Positives = 120/304 (39%), Gaps = 42/304 (13%)
Query: 137 DKTEKVHGALLNCYVMAGSVDKSLSQMQKM-KDMGFVSPLHYNNIMSLYTRTEQHEKVPD 195
D + + +L+N + M +D++ + M F + YN ++ + + ++ E+ +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
V M + G+ + +Y I + D + +++ +++ ++G + + MTY+T+ +
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGL 476
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN 315
K G +KA++ + + + YN MI
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG-------------------------- 510
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
+ K G +E+ L L G D N ++ G+ RKG E+A+ + +
Sbjct: 511 ---------MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
M + G P ++ + + + E + + KE + G+ + + + + +
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC-----GFAGDASTIGLVTNML 616
Query: 436 TDNR 439
D R
Sbjct: 617 HDGR 620
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ LLN +V A K S + G L YN ++ + + ++ EK L M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
++G PD+FSY +N L++ +L +++ G +A D Y+ + + ++K
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDH 235
Query: 262 DKAL-IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
A+ ++ + ED + + +N MIS + G+ D +++W+ K N +++ Y +
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ L G++++AE + + + + D N +L G+ R G I+++ + R M K
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 381 KTPTPNSWSIIASGHVAKENMEKA 404
S++I+ G + +++A
Sbjct: 356 SVNIV-SYNILIKGLLENGKIDEA 378
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 31/396 (7%)
Query: 61 NWL-QEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCP-------ILPG---- 108
+W+ +EG ++ L + AL++ + MS +G+ P ++ G
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 109 -DRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMK 167
D +EL R+ LE + Y K H +++ G VD L ++MK
Sbjct: 233 KDHKTAMELWDRL--LEDSSVY--------PNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 168 DMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE 226
L+ Y++++ +K V + E S D+ +Y L + ++
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM 286
+L +E + +V+ ++Y+ + ++ G D+A + + K Y D Y
Sbjct: 343 ESLELWRIMEHKN--SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 287 ISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGN 346
I G + + + + + Y +++ CL K LEEA L+ + G
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
+ V N L+ G R + +A LR M G PT S++I+ G +A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 407 CFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
KE L EN GW+P S +L + +R I+
Sbjct: 521 FVKEML----EN-GWKPDLKTYSILLCGLCRDRKID 551
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 138/313 (44%), Gaps = 10/313 (3%)
Query: 105 ILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLN----CYVMAGSVDKSL 160
I P V + G ++ ES E+ + +DS ++ HG + N + G VD +
Sbjct: 411 IAPSSVLVHTMIQGCLKA-ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 161 SQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNS 218
S ++ M+ G + P + YNN+M + R + + + + M E G+ P+ F+Y I ++
Sbjct: 470 SFLKMMEQKG-IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 219 YGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKK-CEDKAYK 277
+ D +N ++ ++ + + + Y+T+ N K G KA L+ ++K Y
Sbjct: 529 FFKNKDEQNAWDVINQMNA-SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 278 RDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+YN +I + +G + ++ +N K + +++ K ++ A ++
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 338 LGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
+ + D L+ G+ +K ++ A T+ + + G P + ++ + SG
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 398 KENMEKAFQCFKE 410
M+ A +K+
Sbjct: 708 LGKMDAAIDLYKK 720
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 132 NLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKM-KDMGF-VSPLHYNNIMSLYTRTEQ 189
N S+ + E ++ ++N G K+ +Q + K+ + +S YN+I+ + +
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
Query: 190 HEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYS 249
+ + M E+G SP++ ++ +N + + ++ ++ ++++ ++ +D Y
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM-ELKLDLPAYG 664
Query: 250 TVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKD 308
+ + + K A + + + YN +IS + +LGK + L+K + D
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 309 NCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEK 368
L Y TM+ L+K G++ A L + G D + +L+ G S+KG K
Sbjct: 725 GISCDL-FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 369 AETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
A ML M K TP +S + +GH + N+ +AF+ E L
Sbjct: 784 ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMG-------FVSPLHYNNIMSLYTRTEQHEKVPDVL 197
+LLN + + +++ + +M +MG F + +H L+ + E V ++
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH-----GLFLHNKASEAVA-LI 206
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M + G PD+ +Y +N R D + LL K+E I + + YSTV + K
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA-AKIEANVVIYSTVIDSLCK 265
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
+D AL + E+K + + + Y+ +IS + G+ D RL D ++++N
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL---SDMIERKINPN 322
Query: 318 YIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI-----LLIGYSRKGLIEKA 369
+T ++ VK G L +AEKL E+ + D PNI L+ G+ + +A
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKL--YEEMIKRSID---PNIFTYSSLINGFCMLDRLGEA 377
Query: 370 ETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ ML M+ K P +++ + +G + ++K + F+E
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
P+ +N +++ + R + E+ +L MK++G +P++++Y +N + ++ ++ +
Sbjct: 268 PVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
+++ G + +D + Y+T+ N + + G D+A+ L + + + D + YN ++ +S
Sbjct: 328 EVKKTG-LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSE 386
Query: 294 GKKKDMMRLWKLQKDNCKKQLNR-EYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
G+ ++ +++ Q + LN+ Y +L L G+LE+A K L G
Sbjct: 387 GRSEEALQMLD-QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
N L++ G E +L + G P P SW + + + F+
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSP--LHYNNIM-SLYTRTEQHEKVPDVLAMMKEDGVSPDIF 210
G ++ + +++MK G P + Y+ +M L+ + E V M+ ++G+SPD
Sbjct: 210 GDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 211 SYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKK 270
++ + +N + ++E +K+L+ ++ G + YS + N + K G +A +
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNG-CNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 271 CEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLG 329
+ K D V Y +++ + G+ + M+L +++ C+ Y +L L G
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD-TLTYNVILRGLSSEG 387
Query: 330 DLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWS 389
EEA ++L QW G + I+L G +EKA L M ++G P +W+
Sbjct: 388 RSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWN 447
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 15/232 (6%)
Query: 196 VLAMMKEDGVS-PDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
V+ MK G+S P+ +Y ++ A S + +L E + ++ I+ D +T++ + N
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 255 YVKAGLKDKA---LIYLKK--CEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDN 309
+ +AG ++A L ++KK C Y Y+ +++ + +GK ++ + + K
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYN-----YSALMNGFCKVGKIQEAKQTFDEVKKT 332
Query: 310 CKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKA 369
K Y T++ C + G+ +EA KLLG+ + S D N++L G S +G E+A
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 370 ETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGW 421
ML +G S+ II + +EKA + L+V++E W
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK----FLSVMSERGIW 440
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 18/356 (5%)
Query: 124 ESAESYFQNLSDSD-KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMS 182
E++E++ + L + T +++ Y G + + S M+ MK YN ++S
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILIS 375
Query: 183 LYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIA 242
L+T+ E+ MK+DG+ PD SYR L ++ R +E E L+ +++ + ++
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD-NVE 434
Query: 243 VDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL 302
+D T S + YV+A + +K+ + K+ A + Y+ I Y G + R+
Sbjct: 435 IDEYTQSALTRMYVEAEMLEKSWSWFKRFH-VAGNMSSEGYSANIDAYGERGYLSEAERV 493
Query: 303 WKLQKDNCKKQLNR----EYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
+ C +++N+ EY M+ E+A +L G T D N L+
Sbjct: 494 FI-----CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN 418
+ + K L M + G + + S V + A + +KE + E
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE- 607
Query: 419 KGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRCG 473
P V +++ D ++++ +V ++K+ + N +Y SLIKLY + G
Sbjct: 608 ----PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 131/336 (38%), Gaps = 42/336 (12%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS---- 136
L+ + + +A+++ EW SKG + + ++ R+ G Y Q+L D
Sbjct: 161 LKEQIHWERAVEIFEWFKSKGCYEL----NVIHYNIMLRILGKACKWRYVQSLWDEMIRK 216
Query: 137 --DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKV 193
+G L++ Y G +L + KM +G + ++ +Y + + +K
Sbjct: 217 GIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKA 276
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
+ D D +CL+SY TY+T+ +
Sbjct: 277 EEFFKKWSCDENKAD---SHVCLSSY---------------------------TYNTMID 306
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQ 313
Y K+G +A K+ ++ V +N MI Y + G+ ++ L K K +C
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD 366
Query: 314 LNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETML 373
R Y ++ K D+E A + + G D LL +S + ++E+AE ++
Sbjct: 367 -TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 374 RSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
M D + S + +V E +EK++ FK
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK 461
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 139/336 (41%), Gaps = 23/336 (6%)
Query: 85 KRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV-H 143
KRF V+ MSS+G + ++ G L AE F + +K + +
Sbjct: 461 KRF----HVAGNMSSEGY--------SANIDAYGERGYLSEAERVFICCQEVNKRTVIEY 508
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMK 201
++ Y ++ S +K+ + M G V+P YN ++ + + K L M+
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYG-VTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
E G D Y ++S+ L NM + + K E +I D + Y + N + G
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQL-NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+A+ Y++ ++ ++V YN +I Y +G + +++ +C K + T
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 322 LGCLVKLGD----LEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
C++ L + +AE + + G +F ++L Y + G E+A + + M
Sbjct: 687 -NCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFA-MMLCMYKKNGRFEEATQIAKQMR 744
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
+ P S++ + ++A + FKE ++
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 7/339 (2%)
Query: 64 QEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGL 123
Q + R + ++ K L K+ QA + E M S+GL P + ++ + + G+ L
Sbjct: 137 QHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSL-ISVYGKSELL 195
Query: 124 ESAES---YFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNN 179
+ A S Y +++SD L++C G D S + +M +G S + YN
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNT 255
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVS-PDIFSYRICLNSYGARSDLENMEKLLEKIETE 238
I+ Y + E++ VLA M EDG S PD+ + + SYG ++ ME + +
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM 315
Query: 239 GDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKD 298
G + D T++ + + KAG+ K + E + + V YN +I + G+ +
Sbjct: 316 G-VQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
Query: 299 MMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
M +++ K K + Y +++ K G + + + +L Q S D N ++
Sbjct: 375 MDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
Y + G + + + M ++ P +++ + + A
Sbjct: 435 AYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA 473
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 118 GR-VRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPL 175
GR +R +ES S FQ + + +L+ + AG K S M M+ F ++ +
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILS-FGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 176 HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKI 235
YN ++ + + + EK+ DV MK GV P+ +Y +N+Y + ++ +L +I
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 236 ETEGDIAVDWMTYSTVANFYVKAG-LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
D+ +D ++ + N Y +AG L +Y++ E++ K D + + MI Y + G
Sbjct: 418 -VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM-EERKCKPDKITFATMIKTYTAHG 475
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 18/321 (5%)
Query: 180 IMSLYTRTEQHEKVPDVLAMMK---EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+ SL + K+ + L ++K + GVSP++F Y ++S E L +++
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G + + +TYS + + + + G D AL +L + D K YN +I+ + G
Sbjct: 395 KIG-LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG-- 451
Query: 297 KDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
D+ + K+L Y +++G G + +A +L + G
Sbjct: 452 -DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
LL G R GLI A + M + P +++++ G+ + +M KAF+ KE
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE--- 567
Query: 414 VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRC 472
KG P + ++ + E + FV+ L K +N Y L+ + R
Sbjct: 568 --MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 473 GR--EVDGVLESMKADNIELD 491
G+ E V + M ++LD
Sbjct: 626 GKLEEALSVCQEMVQRGVDLD 646
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 18/251 (7%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ Y K + L M E G+ PD +SYR ++ + ++ +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+G+ ++ + Y+ + + + + G ++AL ++ + D V Y +I +
Sbjct: 605 -KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPN-- 354
K L K D K + Y +M+ K GD +EA G W+L N + VPN
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA---FGIWDLMIN--EGCVPNEV 718
Query: 355 ---ILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWS----IIASGHVAKENMEKAFQC 407
++ G + G + +AE + M P ++ I+ G V +M+KA +
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV---DMQKAVEL 775
Query: 408 FKEALAVLAEN 418
L L N
Sbjct: 776 HNAILKGLLAN 786
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 11/292 (3%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAM 199
++ +++ G V+ +L ++ MK MG + P + YN++++ + +L+
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M G+SPD+ ++ ++ YG L +K ++ + + + +TY+++ N G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM-IQRSVNPNIVTYNSLINGLCIHG 303
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
L D+A L K + +AV YN +I+ Y + D M++ + + Y
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T+ + G AEK+LG+ G D NILL G G I KA L +
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
+++II G + +E A+ F +LA+ KG P DV++ I
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFC-SLAL----KGVSP--DVITYI 468
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 8/286 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G+++K L +M ++D + + YN ++ Y R + +V M+E G PD +Y
Sbjct: 381 GAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
++ + L+ + ++++ G ++ D TYS + N KAG A + D
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
+ + V YN M+ +A ++ ++L++ ++ + Y ++ L G LEE
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
AE + + + D V +L+ + + G +EKA ++M+ G P + + + S
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
+ + +A++ + LA+ G RP + +LS TD R
Sbjct: 618 TFLRVNKIAEAYELLQNMLAL-----GLRPSLQTYTLLLSCCTDGR 658
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 9/284 (3%)
Query: 170 GFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
GF H Y ++ R +Q + +L M DG P+ +Y ++SYG + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
+ +++ E D +TY T+ + + KAG D A+ ++ + D Y+ +I+
Sbjct: 419 MNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 289 HYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
G +L+ ++ C L Y M+ K + + A KL + +G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNL-VTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D +I++ G +E+AE + M K P + ++ N+EKA+Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
++ L + G RP +S+LS I E + + ++
Sbjct: 597 YQAML-----HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 279 DAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+ V YN +I Y + M ++ ++Q+ CK Y T++ K G L+ A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD-RVTYCTLIDIHAKAGFLDIAMDM 456
Query: 338 LGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
+ + G + D ++++ + G + A + MVD+G TP +++I+ H
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 398 KENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVED-FVNSLKKVMS 456
N + A + +++ +N G+ P S ++ + +EE E F +K
Sbjct: 517 ARNYQNALKLYRD-----MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 457 MNRDMYLSLIKLYVRCG 473
+ +Y L+ L+ + G
Sbjct: 572 PDEPVYGLLVDLWGKAG 588
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 10/255 (3%)
Query: 173 SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
S + +N +++ R + D+L M + G P+ SY L+ + ++ + L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
E++ + G D +TY+T+ K G + A+ L + K + YN +I A
Sbjct: 403 ERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 293 LGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
GK ++L + K Y +++G L + G ++EA K ++E G +
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
N +++G + ++A L M+++G P S++I+ G +A E M KEAL
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG-LAYEGMA------KEAL 574
Query: 413 AVLAE--NKGWRPKS 425
+L E NKG KS
Sbjct: 575 ELLNELCNKGLMKKS 589
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 15/287 (5%)
Query: 116 LIGRVRGLESAESYFQNLSDSDKTEKVHGAL----------LNCYVMAGSVDKSLSQMQK 165
L GR + E+ S + N + + V+ + L V G +++ ++
Sbjct: 68 LNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLEN 127
Query: 166 MKDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSD 224
M G V + ++ + R + K +L +++ G PD+ +Y + ++ Y +
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 225 LENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYN 284
+ N +L+++ ++ D +TY+T+ +G +A+ L + + D + Y
Sbjct: 188 INNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 285 HMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
+I M+L +D Y ++ + K G L+EA K L S
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
G + NI+L G AE +L M+ KG +P+ +++I+
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMG-------FVSPLHYNNIMSLYTRTEQHEKVPDVL 197
+LLN Y + +++ + +M +MG F + +H L+ + E V V
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASEAVALVD 214
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M++ G P++ +Y + +N R D++ LL K+E I + + YSTV + K
Sbjct: 215 RMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEANVVIYSTVIDSLCK 272
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
+D AL + E+K + + + Y+ +IS + + D RL D ++++N
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL---SDMIERKINPN 329
Query: 318 YIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
+T ++ VK G L EAEKL + D + L+ G+ +++A+ M
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
M+ K P +++ + +G + +++ + F+E
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y+++++ + ++ ++ + +M P++ +Y +N + ++ +L ++
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK- 295
G + + +TY+T+ + + +A D A + K+ + + YN ++ GK
Sbjct: 428 QRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
+K M+ LQ+ + + Y M+ + K G +E+ L L G D + N
Sbjct: 487 EKAMVVFEYLQRSKMEPTI-YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWS 389
++ G+ RKGL E+A+ + R M + G P P+S +
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDG--PLPDSGT 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 123/279 (44%), Gaps = 9/279 (3%)
Query: 157 DKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
D +L+ +M++ G V P + Y++++S E+ +L+ M E ++P++ ++
Sbjct: 277 DDALNLFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
++++ L EKL +++ + I D TYS++ N + D+A + K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEA 334
+ V YN +I+ + + + + L++ Y T++ + D + A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 335 EKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASG 394
+ + Q G + N LL G + G +EKA + + PT +++I+ G
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 395 HVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILS 433
+E + F +L++ KG +P + ++++S
Sbjct: 515 MCKAGKVEDGWDLFC-SLSL----KGVKPDVIIYNTMIS 548
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 127/288 (44%), Gaps = 18/288 (6%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY---GARSDLENMEKLLE 233
Y +++ + R EK ++ ++EDG+ PD++ Y + SY G + L++
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
+ E D A +Y+ + + Y +AGL A ++ + ++ ++S Y+
Sbjct: 362 HMGCEPDRA----SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS-- 415
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYI---TMLGCLVKLGDLEEAEKLLGQWELSGNTYDF 350
K +D+ + + K+ + + + +ML +LG + EK+L + E T D
Sbjct: 416 -KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 351 KVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
NIL+ Y + G +E+ E + + +K P +W+ + K+ K + F+E
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 411 ALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMN 458
+ + G P +LS + +E+V + ++ K ++++
Sbjct: 535 MI-----DSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVS 577
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 15/331 (4%)
Query: 63 LQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL--ELIGRV 120
L HA D +L + LR K++ + V EW+ K P L + G+
Sbjct: 112 LPSTHASWD-DLINVSVQLRLNKKWDSIILVCEWILRKS--SFQPDVICFNLLIDAYGQK 168
Query: 121 RGLESAESYFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP---- 174
+ AES + L +S TE + L+ Y MAG ++++ + +M++ VSP
Sbjct: 169 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIG 227
Query: 175 --LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
++ I L R E+ DV MK D P +Y + +N YG S KL
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
++ + + TY+ + N + + GL +KA ++ ++ + D YN ++ Y+
Sbjct: 288 CEMRSH-QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 293 LGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
G ++ L + + Y M+ + G +AE + + + G K
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
+LL YS+ + K E +++ M + G P
Sbjct: 407 HMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 130/317 (41%), Gaps = 42/317 (13%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+ AL+N + G +K+ +++++ G ++ YN +M Y+R ++ ++M+
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G PD SY I +++YG + E + E+++ G IA ++ + + Y KA
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDV 442
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
K +K+ + + D N M++ Y LG+ M
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM---------------------- 480
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
EK+L + E T D NIL+ Y + G +E+ E + + +K
Sbjct: 481 -------------EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
P +W+ + K+ K + F+E + + G P +LS + +
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-----DSGCAPDGGTAKVLLSACSSEEQV 582
Query: 442 EEVEDFVNSLKKVMSMN 458
E+V + ++ K ++++
Sbjct: 583 EQVTSVLRTMHKGVTVS 599
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 15/331 (4%)
Query: 63 LQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL--ELIGRV 120
L HA D +L + LR K++ + V EW+ K P L + G+
Sbjct: 134 LPSTHASWD-DLINVSVQLRLNKKWDSIILVCEWILRKS--SFQPDVICFNLLIDAYGQK 190
Query: 121 RGLESAESYFQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP---- 174
+ AES + L +S TE + L+ Y MAG ++++ + +M++ VSP
Sbjct: 191 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIG 249
Query: 175 --LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
++ I L R E+ DV MK D P +Y + +N YG S KL
Sbjct: 250 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 309
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
++ + + TY+ + N + + GL +KA ++ ++ + D YN ++ Y+
Sbjct: 310 CEMRSH-QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 368
Query: 293 LGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
G ++ L + + Y M+ + G +AE + + + G K
Sbjct: 369 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 428
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
+LL YS+ + K E +++ M + G P
Sbjct: 429 HMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L+ V G + + +M++ G S +H Y +++S R ++ + + E G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
+SP ++Y ++ ++ E L+ +++++G + + + ++T+ + Y + G+ D+A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLIDGYCRKGMVDEA 418
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR-EYITMLG 323
+ E K ++ D N + S + L K+ D + W + +L+ Y ++
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRL-KRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 324 CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
K G++EEA++L + G + N+++ Y ++G I++A + +M G P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 384 TPNSWSIIASGHVAKENMEKAFQCFKE 410
+++ + G +N+++A + F E
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSE 564
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 156 VDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
+D L ++M D G ++ ++ R + EK ++ G+ P+ ++Y
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
+N+Y + D +E +L+ ++ +G + + +TY+ + VK G A + ++
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDG-VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDL 331
+ D Y +IS +K +M R + L + +K L+ Y ++ + K+G++
Sbjct: 324 GIESDVHVYTSLISWNC---RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
AE L+ + + G V N L+ GY RKG++++A + M KG + + I
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 392 AS 393
AS
Sbjct: 441 AS 442
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 2/220 (0%)
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHY-NNIMSLYTRTEQHEKVPDVL 197
T+ V L++ Y G VD++ M+ GF + + N I S + R +++++ L
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M E GV SY ++ Y ++E ++L ++ ++G + + +TY+ + Y K
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG-VQPNAITYNVMIYAYCK 516
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
G +A E D+ Y +I + MRL+ Q +
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
Y M+ L K G +EA L + + G T D KV L+
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
+ +C+ D++ + +M + G +S + Y N++ +Y + E+ + M
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
GV P+ +Y + + +Y + ++ KL +E G + D TY+++ + A D+
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG-MDPDSYTYTSLIHGECIADNVDE 557
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
A+ + K +++V Y MIS + GK + L+ K N+ Y ++G
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Query: 324 CL 325
+
Sbjct: 618 SM 619
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 8/286 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G+++K L +M ++D + + YN ++ Y R + +V M+E G PD +Y
Sbjct: 381 GAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
++ + L+ + ++++ G ++ D TYS + N KAG A + D
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
+ + V YN M+ +A ++ ++L++ ++ + Y ++ L G LEE
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
AE + + + D V +L+ + + G +EKA ++M+ G P + + + S
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
+ + +A++ + LA+ G RP + +LS TD R
Sbjct: 618 TFLRVNKIAEAYELLQNMLAL-----GLRPSLQTYTLLLSCCTDGR 658
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 9/284 (3%)
Query: 170 GFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
GF H Y ++ R +Q + +L M DG P+ +Y ++SYG + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
+ +++ E D +TY T+ + + KAG D A+ ++ + D Y+ +I+
Sbjct: 419 MNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 289 HYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
G +L+ ++ C L Y M+ K + + A KL + +G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNL-VTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D +I++ G +E+AE + M K P + ++ N+EKA+Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
++ L + G RP +S+LS I E + + ++
Sbjct: 597 YQAML-----HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 279 DAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+ V YN +I Y + M ++ ++Q+ CK Y T++ K G L+ A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD-RVTYCTLIDIHAKAGFLDIAMDM 456
Query: 338 LGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
+ + G + D ++++ + G + A + MVD+G TP +++I+ H
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 398 KENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVED-FVNSLKKVMS 456
N + A + +++ +N G+ P S ++ + +EE E F +K
Sbjct: 517 ARNYQNALKLYRD-----MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 457 MNRDMYLSLIKLYVRCG 473
+ +Y L+ L+ + G
Sbjct: 572 PDEPVYGLLVDLWGKAG 588
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 8/286 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G+++K L +M ++D + + YN ++ Y R + +V M+E G PD +Y
Sbjct: 381 GAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
++ + L+ + ++++ G ++ D TYS + N KAG A + D
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
+ + V YN M+ +A ++ ++L++ ++ + Y ++ L G LEE
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
AE + + + D V +L+ + + G +EKA ++M+ G P + + + S
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
+ + +A++ + LA+ G RP + +LS TD R
Sbjct: 618 TFLRVNKIAEAYELLQNMLAL-----GLRPSLQTYTLLLSCCTDGR 658
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 9/284 (3%)
Query: 170 GFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
GF H Y ++ R +Q + +L M DG P+ +Y ++SYG + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
+ +++ E D +TY T+ + + KAG D A+ ++ + D Y+ +I+
Sbjct: 419 MNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 289 HYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
G +L+ ++ C L Y M+ K + + A KL + +G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNL-VTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D +I++ G +E+AE + M K P + ++ N+EKA+Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
++ L + G RP +S+LS I E + + ++
Sbjct: 597 YQAML-----HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 279 DAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+ V YN +I Y + M ++ ++Q+ CK Y T++ K G L+ A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD-RVTYCTLIDIHAKAGFLDIAMDM 456
Query: 338 LGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
+ + G + D ++++ + G + A + MVD+G TP +++I+ H
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 398 KENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVED-FVNSLKKVMS 456
N + A + +++ +N G+ P S ++ + +EE E F +K
Sbjct: 517 ARNYQNALKLYRD-----MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 457 MNRDMYLSLIKLYVRCG 473
+ +Y L+ L+ + G
Sbjct: 572 PDEPVYGLLVDLWGKAG 588
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 12/342 (3%)
Query: 49 GDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPG 108
GDPS + +L G + + L I+ L R +A + E + G I P
Sbjct: 283 GDPS-KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG---IKPR 338
Query: 109 DRAVQLELIGRVRG--LESAESYFQNLSDSDKT--EKVHGALLNCYVMAGSVDKSLSQMQ 164
RA L G V+ L+ AES + + E + L++ YV AG + + ++
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 165 KMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGAR 222
+M + G V P ++ +++ + + +K VL MK GV PD Y + ++++G
Sbjct: 399 EM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 223 SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVA 282
+ L++ +++ +EG I D +T++T+ + + K G A + E + A
Sbjct: 458 NCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 283 YNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE 342
YN MI+ Y + DM RL K + T++ K G +A + L + +
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 343 LSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPT 384
G + N L+ Y+++GL E+A R M G P+
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 7/252 (2%)
Query: 160 LSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY 219
LSQ Q + +PL YN ++ R EK +++A M++DG D +Y + + S
Sbjct: 189 LSQKQTL------TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 220 GARSDLENMEKLLEKIETEGD-IAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKR 278
+ ++++ L E E D + +D + + + K+G KAL L +
Sbjct: 243 TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA 302
Query: 279 DAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLL 338
+IS A G+ + L++ + + K R Y +L VK G L++AE ++
Sbjct: 303 KTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV 362
Query: 339 GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
+ E G + D ++L+ Y G E A +L+ M P +S + +G +
Sbjct: 363 SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDR 422
Query: 399 ENMEKAFQCFKE 410
+K FQ KE
Sbjct: 423 GEWQKTFQVLKE 434
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
+++ G+ P +Y L Y L++ E ++ ++E G ++ D TYS + + YV AG
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAG 388
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
+ A I LK+ E + ++ ++ +++ + G+ + ++ K K K + Y
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
++ K L+ A + G D N L+ + + G AE M +M +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 380 GKTPTPNSWSIIASGHVAKE 399
G P +++I+ + + +E
Sbjct: 509 GCLPCATTYNIMINSYGDQE 528
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 169/410 (41%), Gaps = 54/410 (13%)
Query: 86 RFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV--H 143
+F +AL V M C + + +++ G++ ++ A+ F +L D V +
Sbjct: 310 KFLEALSVFAEMKEVN-CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 144 GALLNCYVMAGSVDKS--LSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+L Y A ++ L ++ + KD+ + + YN ++ +Y +T +HEK +++ M+
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIE-QNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G+ P+ +Y ++ +G L+ L +K+ + G + +D + Y T+ Y + GL
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG-VEIDQVLYQTMIVAYERVGL- 485
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+G K ++ KL DN ++ T
Sbjct: 486 -------------------------------MGHAKRLLHELKL-PDNIPRE------TA 507
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ L K G EEA + Q SG D V ++ YSR + M G
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY 567
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
P N +++ + + + EKA ++E + +G +V +LS + +D
Sbjct: 568 FPDSNVIAMVLNAYGKQREFEKADTVYRE-----MQEEGCVFPDEVHFQMLSLYSSKKDF 622
Query: 442 EEVEDFVNSLKKVMSMN-RDMYLSLIKLYVRCGREVDG--VLESMKADNI 488
E VE L+ ++N ++++L + LY R + D V+ M+ I
Sbjct: 623 EMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 156/361 (43%), Gaps = 30/361 (8%)
Query: 114 LELIGRVRGLESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGF 171
+EL R+ A S F L S T + + +++N Y A ++ +++M + G
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGV 291
Query: 172 V-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
+ + + Y+ ++S+Y + + V A MKE + D+ + I ++ YG ++ ++
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
L + + DI + ++Y+T+ Y +A L +A+ + + K +++ V YN MI Y
Sbjct: 352 LFWSLR-KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDF 350
+ + L + + + Y T++ K G L+ A L + SG D
Sbjct: 411 GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 351 KVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKEN---MEKAFQ- 406
+ +++ Y R GL+ A+ +L + P + +I+A +E +AF+
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFES 530
Query: 407 -------CFKEALAVLAENK---------------GWRPKSDVVSSILSWVTDNRDIEEV 444
F + + + N+ G+ P S+V++ +L+ R+ E+
Sbjct: 531 GEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Query: 445 E 445
+
Sbjct: 591 D 591
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKM-KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ L+ + G D +LS +QKM +D + Y+N++ L R + K + + +K
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G++PD+ +Y +N YG ++ L +LL K E + + ++YST+ + YV+
Sbjct: 253 RSGITPDLVAYNSMINVYG-KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL-WKLQKDNCKKQLNREYIT 320
+AL + ++ D N MI Y L K+ RL W L+K + + + Y T
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV-VSYNT 370
Query: 321 ML---GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
+L G G+ +L+ + ++ N + N ++ Y + EKA +++ M
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY---NTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+G P ++S I S +++A F++
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 12/272 (4%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM---MK 201
+LLN + + ++++ + +M +MG+ P +L QH K + +A+ M
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGY-QP-DTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G PD+ +Y +N R + + LL K+E +G I D + YSTV + K
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYSTVIDSLCKYRHV 256
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT- 320
D AL + ++K + D Y+ +IS + G+ D RL D ++++N +T
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL---SDMLERKINPNVVTF 313
Query: 321 --MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
++ K G L EAEKL + + N L+ G+ +++A+ + MV
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
K P +++ + +G + + + F++
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 155/393 (39%), Gaps = 44/393 (11%)
Query: 56 VPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLE 115
V +++ ++ G+ +V L + ++A+ + E M KG P L AV
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 116 LIGRVRGLESAESYFQNLSDSDKTEK---VHGALLNCYVMAGSVDKSLSQMQKMKDMGFV 172
L R G N + K E ++ +++ VD +L+ +M + G +
Sbjct: 215 LCKR--GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-I 271
Query: 173 SP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
P Y++++S + +L+ M E ++P++ ++ ++++ L EK
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
L +++ + I + +TY+++ N + D+A K D V YN +I+ +
Sbjct: 332 LFDEM-IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 291 ASLGKKKDMMRLWK---------------------LQKDNCK------KQLNRE------ 317
K D M L++ Q +C KQ+ +
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 318 --YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
Y T+L L K G LE+A + + S D NI+ G + G +E + S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
+ KG P +++ + SG K E+A+ F
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 123 LESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNN 179
L+ A+ F + D V + L+N + A V + + M G V + + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
++ + + + V M DGV P+I +Y L+ LE + E ++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-KS 479
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
+ D TY+ ++ KAG + K K D +AYN MIS + G K++
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 300 MRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQ-----WELSGNTYDFKVPN 354
L+ K++ + Y T++ ++ GD + +L+ + + +TY V +
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTD 598
Query: 355 ILLIGYSRKGLIE 367
+L G KG +E
Sbjct: 599 MLHDGRLDKGFLE 611
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 43/307 (14%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGF------VSPL-----HYNNIMSLYTRTEQ-- 189
+ L+NC+ + +L+ + KM +G+ +S L H I +Q
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 190 --------------------HEKVPDVLAM---MKEDGVSPDIFSYRICLNSYGARSDLE 226
H K + +A+ M + G P++ +Y + +N R D++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM 286
LL K+E I D + ++T+ + K D AL K+ E K + + V Y+ +
Sbjct: 168 LAFNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 287 ISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWEL 343
IS S G+ D +L D +K++N +T ++ VK G EAEKL
Sbjct: 227 ISCLCSYGRWSDASQLL---SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 344 SGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEK 403
D N L+ G+ ++KA+ M MV K P ++++ + G + +E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 404 AFQCFKE 410
+ F+E
Sbjct: 344 GTELFRE 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
Query: 173 SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
S +N ++S + ++ + V + M+ G+S ++++Y I +N + RS + LL
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
K+ G +T S++ N Y A+ + + + Y+ D + + +I
Sbjct: 69 GKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 293 LGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFK 351
K + + L ++ + C+ L Y ++ L K GD++ A LL + E + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNL-VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 352 VPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
+ N ++ + ++ A + + M KG P ++S + S
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 142 VHGALLNCYVMAGSVDKS---LSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLA 198
V+ ++N G K+ L+ M + K + VS + YN+I+ + + + +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRL-CVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
M +G+SP++ +Y +N + ++ ++ ++++ +G + +D Y + + + K
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALIDGFCKR 667
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNRE 317
+ A + ++ YN +IS + +LG + L+K + KD + L
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT- 726
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y T++ L+K G+L A +L + + G D + +++ G S+KG K M M
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
TP ++ + +GH + N+++AF+ E L +KG P ++S
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML-----DKGILPDGATFDILVSGQVG 841
Query: 438 N 438
N
Sbjct: 842 N 842
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 157/366 (42%), Gaps = 11/366 (3%)
Query: 53 LSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAV 112
+S + + + +EG + +++ R +AL+ + M GL P + V
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV---FHV 412
Query: 113 QLELIGRVRGLESAES---YFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDM 169
+ G ++G + E+ + ++ V +L+ G D++ + KM+
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 170 GFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLEN 227
G + P + YNN+M + R + + V + + E G+ P+ ++Y I ++ D +N
Sbjct: 473 G-IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 228 MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKK-CEDKAYKRDAVAYNHM 286
+++ + T +I V+ + Y T+ N K G KA L E+K ++YN +
Sbjct: 532 ALEVVNHM-TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 287 ISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGN 346
I + G+ + ++ N Y +++ L K +++A ++ + + G
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
D L+ G+ ++ +E A + ++++G P+ ++ + SG NM A
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 407 CFKEAL 412
+K+ L
Sbjct: 711 LYKKML 716
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M DG+S ++ + + + +DL + L +K+E EG + + +T+S + ++ K G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP-SPNSVTFSVLIEWFRKNG 388
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
+KAL + KK E + +I + K ++ ++L+ ++ + L ++
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF---DESFETGLANVFV 445
Query: 320 --TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
T+L L K G +EA +LL + E G + N +++G+ R+ ++ A + +++
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
+KG P ++SI+ G + + A +
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALE 534
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 158/401 (39%), Gaps = 20/401 (4%)
Query: 28 CSASTTV--TINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRK 85
CS TT +R L + + G P + ++EGH +V L +K
Sbjct: 310 CSGGTTCGDVRSRTKLMNGLIERGRPQ-EAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 86 RFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSD--KTEKVH 143
F L + + GL P A+ + L+ A F+ + +S T
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAI-INASSESGNLDQAMKIFEKMKESGCKPTASTF 427
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMK 201
L+ Y G +++S + M + P N ++ + + E+ +++ M+
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
GV PD+ ++ +Y E ++ + + T T+ N Y + G
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASL------GKKKDMMRLWKLQKDNCKKQLN 315
++AL + + ++ + +N +I + ++ G+ D+M + ++ D
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT---- 603
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
+ T++ +GD++ E++ G D +IL GY+R G EKAE +L
Sbjct: 604 --FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLA 416
M G P ++ I SG + M+KA Q +K+ ++
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
A++N + +G+++ ++ + KMK++G + YN ++ Y + E+ ++L +M E+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 204 G---VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG- 259
G V P+I ++ + + ++ + +E ++++K+E E + D +TY+T+A YV+ G
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQKGE 238
Query: 260 -LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKD---------- 308
++ ++ + K + K + ++ Y G+ +D +R + K+
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 309 -----NCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTY----------DFKVP 353
+ ++R+ I + + L E +L+G ++ D
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITY 358
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
+ ++ +S G +EKA + + MV G P +++SI+A G+V + +KA + E L
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLI 417
Query: 414 VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK 453
V + RP + ++++S N +++ N + K
Sbjct: 418 VES-----RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 115/264 (43%), Gaps = 2/264 (0%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ AL+N +D + +M G + + + + ++ ++R + + + + M
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G+ PDI Y +N + DL +++ + G + D +TY+T+ + + + G
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDV 431
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+ AL K+ + + D V ++ ++ G+ D R + K + Y M
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ K GD + KLL + + G+ N+LL G + G ++ A+ +L +M++ G
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 382 TPTPNSWSIIASGHVAKENMEKAF 405
P +++ + GH N K +
Sbjct: 552 VPDDITYNTLLEGHHRHANSSKRY 575
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+N +++ Y + ++ + M++ PD+F+Y +N+ + ++ L +++
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G I D + ++T+ + + + G D +K K + D V YN +++ + K
Sbjct: 338 KRGLIPND-VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC---KN 393
Query: 297 KDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
D++ + ++ L + Y T++ + GD+E A ++ + + +G D
Sbjct: 394 GDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGF 453
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ L+ G ++G + AE LR M+ G P +++++ K + + F+ KE
Sbjct: 454 SALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 161/407 (39%), Gaps = 14/407 (3%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELI---GRVRGLESAESYFQNL 133
+ L K+ ALQ W GL + DR +++I G V L A ++
Sbjct: 120 VYNVLHGAKKLEHALQFFRWTERSGL---IRHDRDTHMKMIKMLGEVSKLNHARCILLDM 176
Query: 134 SDSDKT--EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQH 190
+ E + L+ Y AG V +S+ QKMKD+G + YN++ + R ++
Sbjct: 177 PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRY 236
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
M +GV P +Y + L + LE + E ++T G I+ D T++T
Sbjct: 237 MMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG-ISPDDATFNT 295
Query: 251 VANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNC 310
+ N + + D+A + + V+Y MI Y ++ + D +R+++ + +
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSG-NTYDFKVPNILLIGYSRKGLIEKA 369
+ Y T+L L G + EA+ +L D + LL+ S+ G + A
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Query: 370 ETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK---EALAVLAENKGWRPKSD 426
+L++M + ++ +A + E +L +
Sbjct: 416 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS 475
Query: 427 VVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+ I+ ++ +N + E L K ++D +LI+ + + G
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEG 522
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 146/342 (42%), Gaps = 19/342 (5%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM--- 199
+ +NC+ + +L+ + KM +G+ + + SL +++ D +A+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV--TLSSLLNGYCHSKRISDAVALVDQ 178
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M E G PD F++ ++ + L++++ G D +TY TV N K G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRG 237
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
D AL LKK E + D V YN +I D + L+ + + Y
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 320 TMLGCLVKLGDLEEAEKLLG---QWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM 376
+++ CL G +A +LL + +++ N F L+ + ++G + +AE + M
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA---LIDAFVKEGKLVEAEKLYDEM 354
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVT 436
+ + P ++S + +G + +++A F+ L +K P S+++
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-----LMISKDCFPNVVTYSTLIKGFC 409
Query: 437 DNRDIEE-VEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVD 477
+ +EE +E F ++ + N Y +LI + + R+ D
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ-ARDCD 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 4/240 (1%)
Query: 156 VDKSLSQMQKM-KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
VD ++ M K F S + +N ++S + + E V + M+ G+S D+++Y I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
+N + RS L +L K+ G D +T S++ N Y + A+ + + +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
YK D + +I K + + L ++ + C+ L Y T++ L K GD++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL-VTYGTVVNGLCKRGDIDL 241
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
A LL + E D + N ++ G + ++ A + M +KG P ++S + S
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y+++++ + ++ ++ + +M P++ +Y + + +E +L ++
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK- 295
G + + +TY+T+ + + +A D A + K+ + + YN ++ GK
Sbjct: 426 QRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
K M+ LQ+ + + Y M+ + K G +E+ +L L G + + N
Sbjct: 485 AKAMVVFEYLQRSTMEPDI-YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
++ G+ RKG E+A+++L+ M + G P +++ + + + E + + KE
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 141/330 (42%), Gaps = 17/330 (5%)
Query: 87 FTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV-HGA 145
F +A+ + + M GL P++ + L R LE+A + + + V +G
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
++N G +L+ + KM++ + P + Y+ I+ + H + + M E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G++P++F+Y ++ + + + ++LL + E +I D +T+ N + A +K+
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTF----NALISASVKEG 380
Query: 264 ALIYLKKCEDKAYKR----DAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
L +K D+ R D V YN MI + + D ++ L N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN---- 436
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T++ + ++E +LL + G + N L+ G+ + A+ + + M+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
G P + +I+ G E +E+A + F+
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFE 526
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 10/246 (4%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
+++ Y A VD+ + ++++ G V+ YN ++ + + D+ M
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
GV PD + I L + LE +L E I+ I +D + Y+ + + K D+
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMS-KIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML- 322
A + D YN MIS + D L+ KDN + N Y T++
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 323 GCLVKLGDLEEAEKLLGQWE---LSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
GCL K G+++++ +L+ + SG+ + K+ ++ S + +I E LR ++
Sbjct: 616 GCL-KAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEII---ENYLRPKING 671
Query: 380 GKTPTP 385
+ P
Sbjct: 672 ETSSIP 677
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M G+ D+ +Y +N D ++ LL K+E E I D + YS + + K G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ETHIKPDVVIYSAIIDRLCKDG 310
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
A + +K + YN MI + S G+ D RL +D ++++N + +
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVL 367
Query: 320 T---MLGCLVKLGDLEEAEKLL-------------------------GQWELSGNTYDFK 351
T ++ VK G L EAEKL +++ + + +D
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 352 VP------NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
N ++ Y R +++ +LR + +G +++ + G +N+ A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 406 QCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
F+E ++ G P + + +L +N +EE
Sbjct: 488 DLFQEMIS-----HGVCPDTITCNILLYGFCENEKLEE 520
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 7/291 (2%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ AL+ Y + G +LS + +K G + + Y +++ Y R+ Q K +V MM+
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
++ P++ +Y +++YG+ L ++ ++E +G I + ++ T+ ++ K
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKK 476
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
L + + + AYN I Y + + + + L++ + K + + +
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ ++ EA L + E +V + +L YS++G + +AE++ M G
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
P +++ + + A E KA + F E E G P S S+++
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLE-----MEANGIEPDSIACSALM 642
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 46/370 (12%)
Query: 78 VKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVR--GLESAESY--FQNL 133
+ L +R+ A +V E M + P D LI +R G + E + F+ +
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYP----DNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 134 SDSDK--TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQH 190
S+ ++ V G L+ + G +++L +M+ G S + YN +M Y ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG----------- 239
E+V + M++ G+ P +Y I +++Y R + +E LL ++E G
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 240 -----------DIAVDWM-------------TYSTVANFYVKAGLKDKALIYLKKCEDKA 275
D+A D +Y+ + + Y +G +KA ++ +
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 276 YKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAE 335
K Y ++ + G +M +WKL K Y T+L K G EA
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 336 KLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGH 395
++ ++ G N+L+ Y+R G K +L+ M P ++S +
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 396 VAKENMEKAF 405
V + ++AF
Sbjct: 636 VRVRDFKRAF 645
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 141/330 (42%), Gaps = 17/330 (5%)
Query: 87 FTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV-HGA 145
F +A+ + + M GL P++ + L R LE+A + + + V +G
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
++N G +L+ + KM++ + P + Y+ I+ + H + + M E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G++P++F+Y ++ + + + ++LL + E +I D +T+ N + A +K+
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTF----NALISASVKEG 380
Query: 264 ALIYLKKCEDKAYKR----DAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
L +K D+ R D V YN MI + + D ++ L N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN---- 436
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T++ + ++E +LL + G + N L+ G+ + A+ + + M+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
G P + +I+ G E +E+A + F+
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFE 526
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 43/274 (15%)
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G+ D+ +Y +N D ++ LL K+E E I D + YS + + K G
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT--- 320
A + +K + YN MI + S G+ D RL +D ++++N + +T
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVLTFNA 371
Query: 321 MLGCLVKLGDLEEAEKLL-------------------------GQWELSGNTYDFKVP-- 353
++ VK G L EAEKL +++ + + +D
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 354 ----NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
N ++ Y R +++ +LR + +G +++ + G +N+ A F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 410 EALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
E ++ G P + + +L +N +EE
Sbjct: 492 EMIS-----HGVCPDTITCNILLYGFCENEKLEE 520
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/269 (16%), Positives = 113/269 (42%), Gaps = 10/269 (3%)
Query: 171 FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
F + YN+++ + + + + + +M SPD+ ++ ++ Y ++ +
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
LL +I G +A + TY+T+ + + + + A ++ D + N ++ +
Sbjct: 454 LLREISRRGLVA-NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDF 350
K ++ + L+++ + + Y ++ + K ++EA L + G D
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 351 KVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ N+++ G+ K I A + M D G P ++++ + G + ++K+ + E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 411 ALAVLAENKGWRPKSDVVSSILSWVTDNR 439
+ G+ + + + +TD R
Sbjct: 633 -----MRSNGFSGDAFTIKMVADLITDGR 656
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 168/418 (40%), Gaps = 49/418 (11%)
Query: 75 QRIVKTLRTRKRFTQALQVSEWMSSK-GLCPILPGDRAVQLELIGRVRGLESAESYFQNL 133
+ + ++ +K +AL++ M + G L R+V +E +G E+ E ++
Sbjct: 8 KHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSV-IEKLGYYGKFEAMEEVLVDM 66
Query: 134 SDSDKTEKVHGALLNC---YVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTE 188
++ + G + Y G V ++++ ++M D P YN IMS+ +
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSG 125
Query: 189 QHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTY 248
++ V M++ G++PD++S+ I + S+ S +LL + ++G ++ + Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAY 184
Query: 249 STVANFYVKAGLK----------------------DKALIYL------KKCE---DKAYK 277
TV + + K +K L L K+CE DK K
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 278 RDAV----AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
R + YN I G+ +R+ + K Y ++ L K +E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
AE LG+ G D N L+ GY + G+++ AE ++ V G P ++ +
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
G + +A F EAL KG +P + ++++ +++ I E N +
Sbjct: 365 GLCHEGETNRALALFNEALG-----KGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 11/300 (3%)
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
++ + E G PD+ +Y + S + E L K+ EG + D TY+T+ Y
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAGY 331
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN 315
K G+ A + + D Y +I G+ + L+ K
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
Y T++ L G + EA +L + G + + NIL+ G + G + A+ +++
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
M+ KG P +++I+ G+ + ME A E L V+ +N G P +S+L+ +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENAL----EILDVMLDN-GVDPDVYTYNSLLNGL 506
Query: 436 TDNRDIEEV-EDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVD---GVLESMKADNIELD 491
E+V E + ++K + N + L++ R R++D G+LE MK ++ D
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY-RKLDEALGLLEEMKNKSVNPD 565
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 112/260 (43%), Gaps = 13/260 (5%)
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
++ +M G PDIF++ I ++ Y + +EN ++L+ + G + D TY+++ N
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG-VDPDVYTYNSLLNGL 506
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN 315
K + + K +K + +N ++ K + + L + K+
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWE----LSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ T++ K GDL+ A L + E +S +T + NI++ ++ K + AE
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY---NIIIHAFTEKLNVTMAEK 623
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
+ + MVD+ P ++ ++ G N+ ++ E + EN G+ P + +
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE----MMEN-GFIPSLTTLGRV 678
Query: 432 LSWVTDNRDIEEVEDFVNSL 451
++ + + E ++ +
Sbjct: 679 INCLCVEDRVYEAAGIIHRM 698
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 167/416 (40%), Gaps = 61/416 (14%)
Query: 123 LESAESYFQNLSDSDKTE--KVHGALLNCYVMAGSVDKSLSQMQKMKDMG-FVSPLHYNN 179
L AES + + + + K + LL+ + AG ++ +L +K++ +G F + +
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRA 415
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
++ + + + +V V+A M + + D S + + Y + + L E+ + +
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC 475
Query: 240 DIAV----------------------------------DWMTYSTVANFYVKAGLKDKAL 265
++ D + Y+ + Y KA L +KAL
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 266 IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCL 325
K +++ D YN + A + + R+ D+ K + Y M+
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 326 VKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
V+LG L +A L E +G + V L+ G++ G++E+A R M + G
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG----- 650
Query: 386 NSWSIIASGHVAKENMEKAFQ---CFKEALAVLAENKGWRPKSDVVS--SILSWVTDNRD 440
+ S H+ ++ KA+ C +EA V + K DV + S+LS D
Sbjct: 651 -----VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGI 705
Query: 441 IEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEMEE 496
+ E E N+L++ + + + +++ LY G M + IE+ EEM E
Sbjct: 706 VSEAESIFNALREKGTCDVISFATMMYLYKGMG---------MLDEAIEVAEEMRE 752
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 124 ESAESYFQNLSDSDKTE-KVHG--ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNN 179
E A F L SD + VH +++ Y ++++ +MK+ G ++ Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
+++ + + + +++ +M ++G P+I++Y ++S +S +LL K + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
+ D +TY+ + K ++AL + + ++ D N +I+ + K K+
Sbjct: 459 -LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 300 MRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIG 359
RL++L Y +M+ C K GD++ A K + G D L+ G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 360 YSRKGLIEKAETMLRSMVDKGKTP 383
+K ++++A + +M+D+G +P
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSP 601
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 126/295 (42%), Gaps = 14/295 (4%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPL--HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
GS+ ++ +++M G+ + H I L R + L +++ D P++ +
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y + Y L E L +++ +G + + TY+T+ N + KAG +A +
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQG-LFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKL 328
D+ + + YN I SL KK ++L L + Y ++ K
Sbjct: 420 GDEGFMPNIYTYNAAID---SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
D+ +A + +G D ++ NIL+ + R+ ++++E + + +V G PT ++
Sbjct: 477 NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 389 SIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
+ + S + + +++ A + F + G P S S++S + ++E
Sbjct: 537 TSMISCYCKEGDIDLALKYFHN-----MKRHGCVPDSFTYGSLISGLCKKSMVDE 586
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 8/236 (3%)
Query: 172 VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKL 231
++P YNN++S R E++ + M ED VSPDI+++ +N Y + ++
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 232 LEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYA 291
+ + G D+ TY++ + + D A K+ R+ V+Y +I Y
Sbjct: 178 VTWLIQAG-CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI--YG 234
Query: 292 SLGKKK---DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTY 348
KK + L K++ DNC + R Y ++ L G EA L Q SG
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNV-RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 349 DFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
D + +L+ + +++A +L M++ G P +++ + G K+N+ KA
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHKA 348
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 46/290 (15%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKED 203
LLN V D +KM +G V+ +H YN ++ +++ EK +L+ M+E
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 204 GVSPDIFSYRICLNSY-------------------GARSDLENMEKLLEKIETEG----- 239
GV PDIF+Y ++ Y G ++ + EG
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 240 ---------DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
D+ + +TY+T+ + Y + D+AL + E + + V YN ++
Sbjct: 293 TRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 291 ASLGKKKDMMRLW------KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
G+ ++ RL K++ DN T++ K+ D+ A K+ + S
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCN------TLINAYCKIEDMVSAVKVKKKMIES 406
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASG 394
G D L+ G+ + +E A+ L SM++KG +P ++S + G
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 154 GSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G + ++ ++KM++ GFV + YN ++ L ++ + +V M +G P + +Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
+ G R D++++ LL+++ET G + + T++ +AG ++A LK+ +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE 332
D+ D V Y +I + K +++ K K YIT+L DL+
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 333 EAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIA 392
++ + E G+ D IL+ + G +A L M D+G P ++++ +
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 393 SGHVAKENMEKAFQCFK--EALAV 414
G + ++ A + F E+L V
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGV 429
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 16/255 (6%)
Query: 143 HGALLNCYVMAGSVDKSLS-QMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAM 199
H +++ V AG+VD +L M D F SP Y ++ +++ + + +
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDF-SPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M + G P+ Y I +N +G + + L +++ EG + D TYS + + G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVG 975
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
D+ L Y K+ ++ D V YN +I+ + ++ + L+ K + + + +
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS--RGITPDLY 1033
Query: 320 TMLGCLVKLGD---LEEAEKLLGQWELSG---NTYDFKVPNILLIGYSRKGLIEKAETML 373
T ++ LG +EEA K+ + + +G N + F N L+ GYS G E A +
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF---NALIRGYSLSGKPEHAYAVY 1090
Query: 374 RSMVDKGKTPTPNSW 388
++MV G +P ++
Sbjct: 1091 QTMVTGGFSPNTGTY 1105
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 43/298 (14%)
Query: 167 KDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDL 225
KD+G L YN ++ + E DV +K G PD+ +Y L++YG +
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 226 ENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKAL-IYLKKCEDKAYKRDAVAYN 284
+ + +L +++ T + + +T++ V + VKAG D AL +Y D+ + A Y
Sbjct: 837 DELFELYKEMSTH-ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 285 HMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
+I L K G L EA++L
Sbjct: 896 PLIDG-----------------------------------LSKSGRLYEAKQLFEGMLDY 920
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G + + NIL+ G+ + G + A + + MV +G P ++S++ +++
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 405 FQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMY 462
FKE + G P + I++ + + +EE N +K + D+Y
Sbjct: 981 LHYFKE-----LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 156/388 (40%), Gaps = 54/388 (13%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRV---RGLESAESYFQNL 133
++ L T ++ A +V E M + P DR + L+ R R L+S + ++ +
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKP----DRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 134 SDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQH 190
V L++ AG+ ++ + M+D G + LH YN ++ R +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
+ ++ M+ GV P ++Y + ++ YG
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYG------------------------------ 444
Query: 251 VANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNC 310
K+G AL +K + K + VA N + A G+ ++ +++ KD
Sbjct: 445 ------KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
+ Y M+ C K+G+++EA KLL + +G D V N L+ + +++A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
M M + PT +++ + +G +++A + F+ + KG P + ++
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV-----QKGCPPNTITFNT 613
Query: 431 ILSWVTDNRDIEEVEDFVNSLKKVMSMN 458
+ + N +EV + L K+M M
Sbjct: 614 LFDCLCKN---DEVTLALKMLFKMMDMG 638
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 152/375 (40%), Gaps = 10/375 (2%)
Query: 64 QEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGL 123
++GH +V L F +A + M +G+ P L + L+ RV L
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL-RVHRL 414
Query: 124 ESAESYFQNLSD--SDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM 181
+ A F N+ T + ++ Y +G +L +KMK G + N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN-A 473
Query: 182 SLYT--RTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
SLY+ + + + + +K+ G+ PD +Y + + Y +++ KLL ++ G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
D + +++ N KA D+A + ++ K V YN +++ GK ++
Sbjct: 534 -CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 300 MRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
+ L++ + + C + T+ CL K ++ A K+L + G D N ++
Sbjct: 593 IELFEGMVQKGCPPN-TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN 418
G + G +++A M K P + + G V +E A++ L A+
Sbjct: 652 GLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 419 KGWRPKSDVVSSILS 433
D++ SIL+
Sbjct: 711 PANLFWEDLIGSILA 725
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 7/291 (2%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ AL+ Y + G +LS + +K G + + Y +++ Y R+ Q K +V MM+
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
++ P++ +Y +++YG+ L ++ ++E +G I + ++ T+ ++ K
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKK 344
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
L + + + AYN I Y + + + + L++ + K + + +
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 404
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ ++ EA L + E +V + +L YS++G + +AE++ M G
Sbjct: 405 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
P +++ + + A E KA + F E E G P S S+++
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLE-----MEANGIEPDSIACSALM 510
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 157/375 (41%), Gaps = 51/375 (13%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMKE 202
G+L+N + V ++S + KM ++G+ + YN I+ +T++ D ++
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG--L 260
G+ P++ +Y +N S + +LL + + I + +TYS + + +VK G L
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVL 277
Query: 261 KDKAL----------------------IYLKKCEDKAYK-----------RDAVAYNHMI 287
+ K L + L D+A + D V+YN +I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
+ + + +D M+L++ Y T++ + GD+++A++ Q + G +
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D NILL G G +EKA + M + +++ + G +E+A+
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLS--- 464
F +L++ KG +P ++++S + + EVE +K+ M D LS
Sbjct: 458 FC-SLSL----KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 512
Query: 465 ------LIKLYVRCG 473
LIK + CG
Sbjct: 513 ITLSAELIKKMLSCG 527
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ L+N + A V+ + ++M G VS + YN ++ + + +K + + M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
G+SPDI++Y I L +LE + E ++ ++ +D +TY+TV K G
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTGKV 451
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK------LQKDNC 310
++A K K D V Y M+S + G ++ L+ L K++C
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 144/336 (42%), Gaps = 18/336 (5%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM---MKE 202
++NC+ V +LS + KM +G+ P I SL + +V D +++ M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGY-EPDRV-TIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G PDI +Y ++S + + ++IE +G I + +TY+ + N +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWS 242
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT-- 320
A L K + + Y+ ++ + GK ++ +L ++ + ++ + +T
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGK---VLEAKELFEEMVRMSIDPDIVTYS 299
Query: 321 -MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
++ L ++EA ++ G D N L+ G+ + +E + R M +
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
G +++ + G +++KA + F + + G P + +L + DN
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ-----MDFFGISPDIWTYNILLGGLCDNG 414
Query: 440 DIEE-VEDFVNSLKKVMSMNRDMYLSLIKLYVRCGR 474
++E+ + F + K+ M ++ Y ++I+ + G+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 125/321 (38%), Gaps = 41/321 (12%)
Query: 166 MKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDL 225
+K F S + +N ++S + ++++ V + M+ G+ D++++ I +N + +
Sbjct: 77 VKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQV 136
Query: 226 ENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNH 285
+L K+ G D +T ++ N + + A+ + K + YK D VAYN
Sbjct: 137 SLALSILGKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 286 MISHYASLGKKKDMMRLWK--------------------------------LQKDNCKKQ 313
+I + D +K L D KK+
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 314 LNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
+ IT +L VK G + EA++L + D + L+ G I++A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
M MV KG S++ + +G + +E + F+E +G + ++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE-----MSQRGLVSNTVTYNT 370
Query: 431 ILSWVTDNRDIEEVEDFVNSL 451
++ D+++ ++F + +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQM 391
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 134/318 (42%), Gaps = 45/318 (14%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
L++ Y AG ++ ++S ++M+ + ++ + Y ++ + + + ++ ++ + M ED
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG------------------------ 239
V P+ Y ++ + R D +N K L K+ +G
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 240 ----------DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISH 289
D+ D + ++T+ N Y K+G A+ K ++ ++ D VA + MI
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Query: 290 YASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYD 349
A G+ + + + ++K N + Y ++ L K GD E E+L + +G D
Sbjct: 383 IAKNGQLHEAIVYFCIEKAN-----DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 350 FKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
+ + G ++G + A + MV +G +++ + G +K M +A Q F
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497
Query: 410 EALAVLAENKGWRPKSDV 427
E L N G P S V
Sbjct: 498 EML-----NSGISPDSAV 510
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 137/309 (44%), Gaps = 25/309 (8%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+N+++S + Q + D++ M G PD+ SY ++ + D+ + +LE +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 237 -TEGDIA-VDWMTYSTVANFYVKAGLKDKALIY----LKKCEDKAYKRDAVAYNHMISHY 290
+ G I D ++++++ N + K + D+ +Y LK C + V Y+ I +
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP-----NVVTYSTWIDTF 173
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLV----KLGDLEEAEKLLGQWELSGN 346
G+ + ++ + K + L+ +T CL+ K GDLE A L +
Sbjct: 174 CKSGELQLALKSFHSMK---RDALSPNVVT-FTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
+ + L+ G+ +KG +++AE M MV+ P ++ I G + + + A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 407 CFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSL 465
+ L N+G R I+S + N ++E + V ++K + + ++ ++
Sbjct: 290 FLAKML-----NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 466 IKLYVRCGR 474
+ Y + GR
Sbjct: 345 MNAYFKSGR 353
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 8/271 (2%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKV---PDVLAM 199
++N G ++K+ M+ MK G SP + YN ++ Y + + K+ VL
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYG-CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M E+ VSP++ ++ I ++ + +L K+ +++ + D+ + ++Y+++ N G
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-LDQDVKPNVISYNSLINGLCNGG 345
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
+A+ K + + + YN +I+ + K+ + ++ K R Y
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
++ KLG +++ L + E G D N L+ G R G IE A+ + + K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
G P ++ I+ G+ K KA KE
Sbjct: 466 G-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 16/278 (5%)
Query: 123 LESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYN 178
L + F+ + D D V + +L+N G + +++S KM G V P + YN
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG-VQPNLITYN 370
Query: 179 NIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETE 238
+++ + + + ++ D+ +K G P Y + +++Y +++ L E++E E
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 239 GDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK-KK 297
G I D TY+ + + G + A + K D V ++ ++ Y G+ +K
Sbjct: 431 G-IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRK 488
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE----LSGNTYDFKVP 353
M L ++ K K + I M G K G+L+ A + Q E L N +
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKG-YCKEGNLKAATNMRTQMEKERRLRMNVASY--- 544
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
N+LL GYS+KG +E A +L M++KG P ++ I+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 144/305 (47%), Gaps = 43/305 (14%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
A++N + +G+++ ++ + KMK++G + YN ++ Y + E+ ++L +M E+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 204 G---VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG- 259
G V P+I ++ + + ++ + +E ++++K+E E + D +TY+T+A YV+ G
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQKGE 238
Query: 260 -------------LKDKA-----------------------LIYLKKCEDKAYKRDAVAY 283
+K+KA L ++++ ++ + + V +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 284 NHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWEL 343
N +I+ + + + + + L K+ K Y T++ G +E+A ++ +
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 358
Query: 344 SGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEK 403
+G D +IL GY R +KAE +L +++ + + P ++ + SG + +M+
Sbjct: 359 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDD 417
Query: 404 AFQCF 408
A + F
Sbjct: 418 AMRVF 422
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 160/382 (41%), Gaps = 53/382 (13%)
Query: 116 LIGRVRGLESAESYFQNLSDSDKTEKV--HGALLNCYVMA---GSVDKSLSQMQKMKDMG 170
LI R R E A++ F+ L+++ + + LL + GS+ +S++++
Sbjct: 55 LIERGRPHE-AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTK- 112
Query: 171 FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
+ + +N +++ ++ + E L MKE G++P +Y + YG E +
Sbjct: 113 -LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 231 LLEKIETEG--DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM-- 286
LL+ + EG D+ + T++ + + K ++A +KK E+ + D V YN +
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 287 -----------------------------------ISHYASLGKKKDMMRLWKLQKDNCK 311
+ Y G+ +D +R + K+
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 312 KQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ + +++ V++ D + +++L + D + ++ +S G +EKA
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
+ + MV G P +++SI+A G+V + +KA + E L V + RP + +++
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVES-----RPNVVIFTTV 405
Query: 432 LSWVTDNRDIEEVEDFVNSLKK 453
+S N +++ N + K
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCK 427
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 46/338 (13%)
Query: 130 FQNLSDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMK-DMGFVSPLHYNNIMSLYTR 186
F N+ +SD ++ ++G + V V K L +MK D + S YN ++ +
Sbjct: 167 FLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK 226
Query: 187 TEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWM 246
++ + M + P + +Y ++ Y + E K+ E+++ + I +
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD-HIEPSLI 285
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ 306
T++T+ KAG+ + A LK+ +D + DA ++ + Y+S K + + +++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 307 KDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKG-- 364
D+ K +L L K G +E+AE++LG+ G + + N ++ GY RKG
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 365 ------------------------LI---------EKAETMLRSMVDKGKTPTPNSWSII 391
LI E AE + M KG +P+ +++I+
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVS 429
G+ K +K F KE E+ G P +VVS
Sbjct: 466 IGGYGRKYEFDKCFDILKE-----MEDNGTMP--NVVS 496
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
LL AG V+ + + +++MKD+GFV ++ + Y+ E+ E V +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
GV + ++ I LN+ +E E++L + +G + + + Y+T+ + Y + G
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRKGDLVG 407
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLG------KKKDMMRL--------------- 302
A + ++ E + K D +AYN +I + LG K+ + M+L
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 303 ---WKLQKDNCKKQLNR-----------EYITMLGCLVKLGDLEEAEKLLGQWELSGNTY 348
K + D C L Y T++ CL K L EA+ + E G +
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 349 DFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
++ N+L+ G KG IE A + M+ KG +++ + G + +A
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA---- 583
Query: 409 KEALAVLAENKGWRPKSDVVSSILS 433
E L + KG +P +S++S
Sbjct: 584 -EDLLLEISRKGLKPDVFTYNSLIS 607
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 150/364 (41%), Gaps = 57/364 (15%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL--HYNNIMSLYTRTEQHEKVPDVLAMM 200
+ L+ + G ++ + ++ KMK G VSP YN ++ Y R + +K D+L M
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
+++G P++ SY +N S KLLE
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGS------KLLE--------------------------- 512
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKK--QLNR-E 317
A I + ED+ YN +I S GK +D R K+ KK +LN
Sbjct: 513 ---AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR---FSKEMLKKGIELNLVT 566
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y T++ L G L EAE LL + G D N L+ GY G +++ + M
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
G PT ++ ++ S KE +E + F E +P V + +L
Sbjct: 627 RSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM--------SLKPDLLVYNGVLHCYAV 677
Query: 438 NRDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYVRCGR--EVDGVLESMKADNIELDEEM 494
+ D+E+ + + +K + +++ Y SLI ++ G+ EV +++ M A +E + +
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 495 EEIL 498
I+
Sbjct: 738 YNII 741
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 116/271 (42%), Gaps = 41/271 (15%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAM 199
+++ L++ G ++ + ++M G ++ + YN ++ + T + + D+L
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
+ G+ PD+F+Y ++ YG +++ L E+++ G I TY + + K G
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG-IKPTLKTYHLLISLCTKEG 648
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
++ ++ + + K D + YN ++ YA G DM + + LQK +K +
Sbjct: 649 IELTERLF----GEMSLKPDLLVYNGVLHCYAVHG---DMEKAFNLQKQMIEKSIG---- 697
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
L TY N L++G + G + + +++ M +
Sbjct: 698 -----------------------LDKTTY-----NSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
P ++++II GH ++ A+ ++E
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYRE 760
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 137/304 (45%), Gaps = 24/304 (7%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVS---PDIFSYRICLNSYGARSDLENMEKLLE 233
YN I++ Y ++ +E D L M++E G + PD F+ L + D+ +++
Sbjct: 210 YNTIIAGYAQSGMYE---DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 234 KIETEGDIAVDWMTYSTVANFYVK-AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
+ +G I D S++ + Y K A ++D ++ + Y RD +++N +++ Y
Sbjct: 267 YVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVF-----SRLYCRDGISWNSLVAGYVQ 320
Query: 293 LGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
G+ + +RL++ K + +++ L L ++L G G + +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
+ L+ YS+ G I+ A R + D+ SW+ I GH + +A F+E
Sbjct: 381 ASALVDMYSKCGNIKAA----RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE-- 434
Query: 413 AVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYV 470
+ +G +P ++L+ + ++E + NS+ KV +N+++ Y ++ L
Sbjct: 435 ---MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 471 RCGR 474
R G+
Sbjct: 492 RAGK 495
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 159/376 (42%), Gaps = 19/376 (5%)
Query: 131 QNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQ 189
QNL S + L+NC+ + +L+ + KM +G+ + N++++ + +
Sbjct: 108 QNLGISHNL-YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 190 HEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYS 249
++ M E G PD F++ ++ + L++++ +G D +TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYG 225
Query: 250 TVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDN 309
V N K G D AL LKK E + V YN +I + D + L+ +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 310 CKKQLNREYITMLGCLVKLGDLEEAEKLLG---QWELSGNTYDFKVPNILLIGYSRKGLI 366
+ Y +++ CL G +A +LL + +++ N F L+ + ++G +
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA---LIDAFVKEGKL 342
Query: 367 EKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSD 426
+AE + M+ + P ++S + +G + +++A F+ L +K P
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-----LMISKDCFPNVV 397
Query: 427 VVSSILSWVTDNRDIEE-VEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDG---VLES 482
++++ + ++E +E F ++ + N Y +LI + + RE D V +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ-ARECDNAQIVFKQ 456
Query: 483 MKADNIELDEEMEEIL 498
M +D + D IL
Sbjct: 457 MVSDGVLPDIMTYSIL 472
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 107/256 (41%), Gaps = 39/256 (15%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKM--KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
+ +L+N + M +D++ + M KD F + + YN ++ + + ++ ++ ++ M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDC-FPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
+ G+ + +Y ++ + + +N + + +++ ++G + D MTYS + + G
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG-VLPDIMTYSILLDGLCNNGK 481
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
+ AL+ + + + D YN MI
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEG------------------------------- 510
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
+ K G +E+ L L G + ++ G+ RKGL E+A+ + R M ++G
Sbjct: 511 ----MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 381 KTPTPNSWSIIASGHV 396
P +++ + H+
Sbjct: 567 PLPDSGTYNTLIRAHL 582
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 159/397 (40%), Gaps = 68/397 (17%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMM 200
+G ++N G +D +LS ++KM + G + P + YN I+ + ++ M
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 201 KEDGVSPDIFSYRI---CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
G+ P++ +Y CL +YG SD +LL + E I + +T+S + + +VK
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSD---ASRLLSDM-IERKINPNVVTFSALIDAFVK 338
Query: 258 AGLKDKALIYLKKCEDKAYKR----DAVAYNHMISHYA---SLGKKKDMMRLW------- 303
G L+ +K D+ KR D Y+ +I+ + L + K M L
Sbjct: 339 EG----KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 304 ------KLQKDNCKK-------QLNRE------------YITMLGCLVKLGDLEEAEKLL 338
L K CK +L RE Y T++ + + + A+ +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 339 GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
Q G D +ILL G G +E A + + P +++I+ G
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 399 ENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSM- 457
+E + F +L++ KG +P ++++S EE + +K+ +
Sbjct: 515 GKVEDGWDLFC-SLSL----KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 458 NRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEM 494
+ Y +LI+ ++R G KA + EL EM
Sbjct: 570 DSGTYNTLIRAHLRDGD---------KAASAELIREM 597
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G ++K L +M ++D + + YN ++ Y R ++ +V M+E G PD +Y
Sbjct: 376 GEINKLLDEM--VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYC 433
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
++ + L+ + ++++ E ++ D TYS + N KAG A +
Sbjct: 434 TLIDIHAKAGFLDIAMDMYQRMQ-EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG 492
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
+ + V +N MI+ +A + ++L++ ++ + Y ++ L G LEE
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
AE + + + D V +L+ + + G ++KA ++M+ G P + + + S
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK 453
+ M +A+ + LA+ G P + +LS TD R ++ F L
Sbjct: 613 TFLRVHRMSEAYNLLQSMLAL-----GLHPSLQTYTLLLSCCTDARSNFDM-GFCGQLMA 666
Query: 454 VMSMNRDMYL 463
V M+L
Sbjct: 667 VSGHPAHMFL 676
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 12/305 (3%)
Query: 170 GFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
GF H Y ++ R +Q ++ +L M DG P+ +Y ++SYG + L+
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
+ +++ E D +TY T+ + + KAG D A+ ++ ++ D Y+ +I+
Sbjct: 414 MNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 289 HYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
G RL+ ++ C L + M+ K + E A KL + +G
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNL-VTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D +I++ G +E+AE + M K P + ++ N++KA+Q
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIK 467
++ L G RP +S+LS + + + N L+ ++++ L
Sbjct: 592 YQAML-----QAGLRPNVPTCNSLLSTFL---RVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 468 LYVRC 472
L + C
Sbjct: 644 LLLSC 648
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 132/298 (44%), Gaps = 11/298 (3%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
AL++ +V G + ++ +M G ++P + YN+++ + + + + +M
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRG-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G PDI +Y I +NSY +++ +L +I ++G I + +TY+T+ + ++G +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKLN 437
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITM 321
A ++ + V Y ++ G+ + ++ K+QK + I +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
G + +++A L G D N+++ G +KG + +A+ + R M + G
Sbjct: 498 HG-MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
TP +++I+ H+ + + + +E G+ S + ++ ++D R
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVC-----GFSADSSTIKMVIDMLSDRR 609
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDM----GFVSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
L+N + + G V ++++ + +M +M V+ N + L R + + D M
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID---RM 201
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
E G PD +Y LN + L K+E E +I + YS V + K G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGS 260
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
D AL + E K K D V Y+ +I + GK D K+ ++ + + + +T
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG---AKMLREMIGRNIIPDVVT 317
Query: 321 ---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
++ VK G L EA++L + G D N L+ G+ ++ + +A M MV
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKS 425
KG P ++SI+ + + + ++ + F+E +KG P +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-----ISSKGLIPNT 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 173 SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY------------- 219
+P+ +N + S RT+Q++ V M+ +G+ D+++ I +N Y
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 220 ------GARSDLENMEKLLEKIETEGDIA---------------VDWMTYSTVANFYVKA 258
G D L+ EG ++ D +T ST+ N
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNRE 317
G +AL+ + + + ++ D V Y +++ G + L+ K+++ N K + +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV-VQ 247
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y ++ L K G ++A L + E+ G D + L+ G G + MLR M+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
+ P ++S + V + + +A + + E + +G P + +S++
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT-----RGIAPDTITYNSLI 357
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 28/288 (9%)
Query: 119 RVRGLESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH 176
R R E A S+++ + ++D LL CYV + + M GF ++
Sbjct: 84 RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143
Query: 177 YNNIM-SLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKI 235
+NI+ R + K +L M+ + + PD+FSY + + +LE +L ++
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 236 ETEGDIAVDW--MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
+ G W +T+ + + + KAG D+A+ +LK+ + + D V Y +I +
Sbjct: 204 KGSG---CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV- 352
G+ L+ + Y T++ KLG L+EA ++ ++F +
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI----------FEFMIE 310
Query: 353 ----PNI-----LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
PN+ L+ G G ++A +L M++K + P +++II
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKE 202
G L++ + AG +D+++ +++MK MG + L Y +++ + + ++ + + E
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G SP +Y + + L+ ++ E + G + + TY+ + + G
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTK 334
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
+AL L +K + +AV YN +I+ G D + + +L K + N Y +L
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTY---DFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
G L GDL+EA KLL L ++Y D N L+ G ++ + +A + +V+K
Sbjct: 395 GGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ +I+ + + ++ KA + +K+
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIG---RVRGLESAESYFQNL 133
++ L R QAL + + + K + GDR L+ + + A ++ +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEK----LGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 134 SDSD--KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-----YNNIMSLYTR 186
SDS + + A+++ + G ++ + + KM+ VS L YN ++S +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR----VSELQPSVFDYNCLLSSLCK 541
Query: 187 TEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWM 246
++ + M+ D PD+ S+ I ++ D+++ E LL + G ++ D
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG-LSPDLF 600
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK 304
TYS + N ++K G D+A+ + K D ++ DA + ++ + S G+ + L K
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVK 658
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 7/270 (2%)
Query: 119 RVRGLESAESYFQNLSDSDKTEK---VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP- 174
+ + LE Y + ++ + + LL + +G VD+ ++ + K DM VSP
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ-VNALFKDLDMSPVSPD 242
Query: 175 -LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+N +M Y + +++ VL M+ + PDI ++ + ++SYG + + E ME+ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
+ + T++++ Y KA + DKA KK D Y + Y MI Y
Sbjct: 303 SLMRSKEKPT-LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
G +++ ++ + ML + G EA+KL D
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
L Y++ + E+ + +++ M G P
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 146/338 (43%), Gaps = 18/338 (5%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM--- 199
+ +NC+ + +L+ + KM +G+ + + SL +++ D +A+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV--TLSSLLNGYCHSKRISDAVALVDQ 178
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M E G PD F++ ++ + L++++ G D +TY TV N K G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRG 237
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
D AL L K E K + V +N +I + + L+ + + Y
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 320 TMLGCLVKLGDLEEAEKLLGQW---ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM 376
+++ CL G +A +LL +++ N F N L+ + ++G + +AE + M
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF---NALIDAFFKEGKLVEAEKLHEEM 354
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVT 436
+ + P +++++ +G +++A Q FK ++ K P +++++
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-----KDCLPNIQTYNTLINGFC 409
Query: 437 DNRDIEE-VEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+ +E+ VE F ++ + N Y ++I+ + + G
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
+ YN +++ + + ++ + M P+I +Y +N + +E+ +L +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ G + + +TY+T+ + +AG D A + K+ D + Y+ ++ S G
Sbjct: 424 MSQRGLVG-NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 295 KKKDMMRLWK-LQKDNCKKQLN-REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
K + ++K LQK + +LN Y TM+ + K G + EA L + + +
Sbjct: 483 KLDTALVIFKYLQKS--EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY-- 538
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
N ++ G K L+++A+ + R M + G P +++ + ++ + + + KE
Sbjct: 539 -NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE-- 595
Query: 413 AVLAENKGWRPKSDVVSSILSWVTDNR 439
+ G+ + +S + + + D R
Sbjct: 596 ---MRSSGFVGDASTISLVTNMLHDGR 619
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 166 MKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDL 225
+K F S + +N ++S + + E V + M+ G+S D+++Y I +N + RS L
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 226 ENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNH 285
+L K+ G D +T S++ N Y + A+ + + + YK D +
Sbjct: 135 SLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 286 MISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
+I K + + L ++ + C+ L Y T++ L K GD++ A LL + E +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDL-VTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWS 389
+ + N ++ + +E A + M KG P +++
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 169/417 (40%), Gaps = 50/417 (11%)
Query: 58 VLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCP--ILPGDRAVQLE 115
+LE G + ++ L R +A ++ M +G P I G L
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 116 LIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP- 174
IGRV ++A+ F + + + L++ +V G +D + + + M + P
Sbjct: 334 KIGRV---DAAKDLFYRIPKPEIV--IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 175 -LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
YN+++ Y + +VL M+ G P+++SY I ++ + ++ +L
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
++ +G + + + ++ + + + K +A+ ++ K K D +N +IS +
Sbjct: 449 EMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGN-----TY 348
+ K + L + Y T++ ++ G+++EA KL+ + G+ TY
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 349 -------------------------DFKVP-----NILLIGYSRKGLIEKAETMLRSMVD 378
D P NIL+ G R G++E+A + MV
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
+G TP +++ + +G +E F++ A +G P + ++++SW+
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-----EGIPPDTVTFNTLMSWL 679
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 42/302 (13%)
Query: 153 AGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG +++ Q K K + H YN I++ +Q++ + V M EDG SPD+ +
Sbjct: 197 AGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLT 256
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y I L + ++ ++L +++ +G + D TY+ + + K AL L
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDG-FSPDSYTYNILLHILGKGNKPLAALTTL--- 312
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
NHM +G ++ Y T++ L + G+L
Sbjct: 313 ------------NHM----KEVGIDPSVL----------------HYTTLIDGLSRAGNL 340
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
E + L + +G D +++ GY G ++KA+ M R M KG+ P +++ +
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 392 ASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
G +A KE E++G P V S+++S++ + E + +
Sbjct: 401 IRGLCMAGEFREACWLLKE-----MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Query: 452 KK 453
K
Sbjct: 456 VK 457
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 15/292 (5%)
Query: 122 GLESAESYFQNLSDSDKTE-KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNN 179
+E A F L D+ K + + L++ + A D + + M MK F + Y +
Sbjct: 254 SIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTS 313
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG 239
+ Y + +V ++L M+E+G +P++ +Y I ++S G + + EK++ +G
Sbjct: 314 FVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG 373
Query: 240 DIAVDWMTYSTVANFYVKAG-LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKD 298
+ D YS++ + K G KD A I+ + ++ +RD + YN MIS A+L +D
Sbjct: 374 CVP-DAKFYSSLIHILSKTGRFKDAAEIF-EDMTNQGVRRDVLVYNTMIS--AALHHSRD 429
Query: 299 MMRLWKLQK------DNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKV 352
M L L++ ++C + Y +L ++ LL + + D
Sbjct: 430 EMALRLLKRMEDEEGESCSPNV-ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVST 488
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
+L+ G G +E+A V KG P ++ ++ + K+NM +A
Sbjct: 489 YILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD-ELEKKNMAEA 539
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 7/279 (2%)
Query: 111 AVQLELIGRVRGLESAESYFQNLSDSDKTEK---VHGALLNCYVMAGSVDKSLSQMQKMK 167
L + + LE Y + ++ + + LL + +G VD+ ++ + K
Sbjct: 176 TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ-VNALFKDL 234
Query: 168 DMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDL 225
DM VSP +N +M Y + +++ VL M+ + PDI ++ + ++SYG + +
Sbjct: 235 DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 226 ENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNH 285
E ME+ + + + T++++ Y KA + DKA KK D Y + Y
Sbjct: 295 EKMEQTFKSLMRSKEKPT-LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYEC 353
Query: 286 MISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSG 345
MI Y G +++ ++ + ML + G EA+KL
Sbjct: 354 MIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFR 413
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPT 384
D L Y++ + E+ + +++ M G P
Sbjct: 414 VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 124/272 (45%), Gaps = 14/272 (5%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
+V ++L Y G +D + ++M++ ++ +N+++ Y + +HE+ +++ M
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIA---WNSVLLAYCQNGKHEEAVELVKEM 273
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
+++G+SP + ++ I + Y + L++K+ET G I D T++ + + + G+
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG-ITADVFTWTAMISGLIHNGM 332
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI- 319
+ +AL +K +AV +S + L K + + ++ K + +
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL---KVINQGSEVHSIAVKMGFIDDVLV 389
Query: 320 --TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
+++ K G LE+A K+ S D N ++ GY + G KA + M
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFD----SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
D P +W+ + SG++ + +A F+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 143/351 (40%), Gaps = 53/351 (15%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V LL+ Y G + + M++ + ++ ++ Y+R + +V + +M
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFT---WSAMIGAYSRENRWREVAKLFRLMM 173
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+DGV PD F + L D+E K++ + + ++ +++ Y K G
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVE-AGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
D A + ++ + RD +A+N ++ Y GK
Sbjct: 233 DFATKFFRRMRE----RDVIAWNSVLLAYCQNGKH------------------------- 263
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
EEA +L+ + E G + NIL+ GY++ G + A +++ M G
Sbjct: 264 ----------EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI 313
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
T +W+ + SG + +A F++ G P + + S +S + + I
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLA-----GVVPNAVTIMSAVSACSCLKVI 368
Query: 442 EEVEDFVNSLKKVMSMNRDMYL--SLIKLYVRCGREVDG--VLESMKADNI 488
+ + V+S+ M D+ + SL+ +Y +CG+ D V +S+K ++
Sbjct: 369 NQGSE-VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 116/272 (42%), Gaps = 17/272 (6%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V +L++ Y G ++ + +K+ + +N++++ Y + K ++ M+
Sbjct: 389 VGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT---WNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ + P+I ++ ++ Y D L +++E +G + + T++ + Y++ G K
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI-- 319
D+AL +K + + ++V ++ A+L K M+R + C + N + I
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK-MVR----EIHGCVLRRNLDAIHA 560
Query: 320 ---TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM 376
+ K GD+E + + L T D N L+ GY G A + M
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIF----LGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
+G TP + S I H N+++ + F
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN +++ + + E L + G+ P+ SY + +Y + + KLL ++
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G D +TY + + V +G D A+ K D+ DA YN ++S G+
Sbjct: 408 ERG-CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
L+ D Y T++ ++ GD +EA K+ G D N +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
+ G+ R G++++A + M ++ P ++S I G+V +++M A + F+
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 127/323 (39%), Gaps = 22/323 (6%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
+ YN I+ Y + E V +K G P + ++ +N + D ++LL +
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKA----LIYLKKCEDKAYKRDAVAYNHMISHY 290
++ G W + + Y D A I C K D YN +I+
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC-----KPDVATYNILINRL 355
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQL---NREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
GKK+ + + KK L N Y ++ K + + A KLL Q G
Sbjct: 356 CKEGKKEVAVGFLD---EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
D IL+ G G ++ A M ++D+G +P ++++ SG A
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVED-FVNSLKKVMSMNRDMYLSLI 466
F E L ++ P + V ++++ + D +E F S++K + ++ + ++I
Sbjct: 473 FSEML-----DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 467 KLYVRCGREVDGVLESMKADNIE 489
K + R G +D L M N E
Sbjct: 528 KGFCRSGM-LDEALACMNRMNEE 549
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 46/302 (15%)
Query: 153 AGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFS 211
AG + Q K K + H YN I+ +Q++ + V M EDG +PD+ +
Sbjct: 200 AGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLT 259
Query: 212 YRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKC 271
Y I + ANF + G D+ L +
Sbjct: 260 YNIVM----------------------------------FANF--RLGKTDRLYRLLDEM 283
Query: 272 EDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDL 331
+ D YN ++ H A+ K + L ++ + + T++ L + G L
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
E + + + G T D +++ GY G +EKAE M + M +KG+ P +++ +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 392 ASGHVAKENMEKAFQCFKEALAVLA--ENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVN 449
G FKEA A+L E++G P V S++++ + + + E + V
Sbjct: 404 IRGFCMAGK-------FKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Query: 450 SL 451
+
Sbjct: 457 DM 458
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 27/328 (8%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L+ Y G+ + + + + MG + + Y +M Y R + + M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKI--ETEGDIAVDWMTYSTVANFYVKAGLKD 262
P +Y+I L ++ + E++ E + E + + D Y + Y KAG +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISH---YASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
KA K + V YN ++S Y + K D M+ +Q D Y
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV------SYA 318
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
++ + EEA + + +G K NILL ++ G++E+A+T+ +SM
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
P S++ + S +V +ME A + FK + G+ P +++
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKR-----IKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 440 DIEEVEDFVNSLKKVMSMNRDMYLSLIK 467
D+E K+M + M LS IK
Sbjct: 434 DVE----------KMMEVYEKMRLSGIK 451
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH--YNNIMSLYTRTEQHEKVPDVLAMM 200
+ L+ Y A +++LS ++M D G V P H YN ++ + + E+ V M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAG-VRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
+ D + PD++SY L++Y SD+E EK ++I+ +G + +TY T+ Y KA
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG-FEPNIVTYGTLIKGYAKAND 434
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL--WKLQKDNCKKQLNREY 318
+K + +K K + ++ + G+ K+ W + ++C +++
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMD---ASGRCKNFGSALGWYKEMESCGVPPDQKA 491
Query: 319 ITMLGCLVKLGD-LEEAEKLLG 339
+L L D LEEA++L G
Sbjct: 492 KNVLLSLASTQDELEEAKELTG 513
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 131/328 (39%), Gaps = 27/328 (8%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L+ Y G+ + + + + MG + + Y +M Y R + + M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKI--ETEGDIAVDWMTYSTVANFYVKAGLKD 262
P +Y+I L ++ + E++ E + E + + D Y + Y KAG +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISH---YASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
KA K + V YN ++S Y + K D M+ +Q D Y
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV------SYA 325
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
++ + EEA + + +G K NILL ++ G++E+A+T+ +SM
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
P S++ + S +V +ME A + FK + G+ P +++
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKR-----IKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 440 DIEEVEDFVNSLKKVMSMNRDMYLSLIK 467
D+E K+M + M LS IK
Sbjct: 441 DVE----------KMMEVYEKMRLSGIK 458
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH--YNNIMSLYTRTEQHEKVPDVLAMM 200
+ L+ Y A +++LS ++M D G V P H YN ++ + + E+ V M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAG-VRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
+ D + PD++SY L++Y SD+E EK ++I+ +G + +TY T+ Y KA
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG-FEPNIVTYGTLIKGYAKA 439
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 154/333 (46%), Gaps = 26/333 (7%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGV 205
+L Y M GS ++ D+ S +N+I+S + R + M GV
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRL-DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 206 SPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKAL 265
SPD+ ++ + + A + + ++ L + + + G +D + VA+ +KA L+ +
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG---MDCNEF--VASSLIKAYLEYGKI 189
Query: 266 IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCL 325
K D+ ++D V +N M++ YA G +++ + + + + Q++ +T C+
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD---QISPNAVT-FDCV 245
Query: 326 VKLGD----LEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ + ++ +L G +SG ++ + N LL YS+ G + A + R M+ +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR-MMSRAD 304
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
T T W+ + SG+V ME++ F E ++ G P + SS+L V+ ++
Sbjct: 305 TVT---WNCMISGYVQSGLMEESLTFFYEMIS-----SGVLPDAITFSSLLPSVSKFENL 356
Query: 442 EEVEDFVNSLKKVMSMNRDMYLS--LIKLYVRC 472
E + ++ S++ D++L+ LI Y +C
Sbjct: 357 EYCKQ-IHCYIMRHSISLDIFLTSALIDAYFKC 388
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 28/380 (7%)
Query: 58 VLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL--E 115
+L+ L G V ++ L + F AL+ M + + P G L
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP--GGGLLTTLISG 479
Query: 116 LIGRVRGLESAESYFQNLSDSDKTE-KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-S 173
L + ++ E +FQ L+ + + ALL+ AG +D++ +++ G V
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+ YN ++S ++ ++ L M + G+ PD ++Y I + L NM K+ E
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI------CGLFNMNKVEE 593
Query: 234 KIETEGDIAVDWM-----TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
I+ D + M TYS + + KA ++ + + K + + V YNH+I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 289 HYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSG--- 345
Y G+ + L + K + Y +++ + + +EEA+ L + + G
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
N + + L+ GY + G + K E +LR M K P +++++ G+ N+ +A
Sbjct: 714 NVFHYTA---LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 406 QCFKEALAVLAENKGWRPKS 425
+ E KG P S
Sbjct: 771 RLLNE-----MREKGIVPDS 785
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 171 FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
F S N +++ R + +K + ++ + GVSPD++ + +N++ +E K
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
L K+E E +A + +T++TV + G D+A ++ +K ++ + + Y+ ++
Sbjct: 282 LFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK-- 338
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNT 347
L + K + + + K+ KK I ++ ++ G L +A ++ G +
Sbjct: 339 -GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
N L+ GY + G + AE +L+ M+ G S++ +
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 28/380 (7%)
Query: 58 VLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQL--E 115
+L+ L G V ++ L + F AL+ M + + P G L
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP--GGGLLTTLISG 479
Query: 116 LIGRVRGLESAESYFQNLSDSDKTE-KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-S 173
L + ++ E +FQ L+ + + ALL+ AG +D++ +++ G V
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+ YN ++S ++ ++ L M + G+ PD ++Y I + L NM K+ E
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI------CGLFNMNKVEE 593
Query: 234 KIETEGDIAVDWM-----TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
I+ D + M TYS + + KA ++ + + K + + V YNH+I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 289 HYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSG--- 345
Y G+ + L + K + Y +++ + + +EEA+ L + + G
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
N + + L+ GY + G + K E +LR M K P +++++ G+ N+ +A
Sbjct: 714 NVFHYTA---LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 406 QCFKEALAVLAENKGWRPKS 425
+ E KG P S
Sbjct: 771 RLLNE-----MREKGIVPDS 785
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 171 FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
F S N +++ R + +K + ++ + GVSPD++ + +N++ +E K
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
L K+E E +A + +T++TV + G D+A ++ +K ++ + + Y+ ++
Sbjct: 282 LFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK-- 338
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELSGNT 347
L + K + + + K+ KK I ++ ++ G L +A ++ G +
Sbjct: 339 -GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
N L+ GY + G + AE +L+ M+ G S++ +
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 20/300 (6%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN+++ +Y+R + ++V + M + + PD ++ + + + + LE E + K
Sbjct: 84 YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
G D S+V N Y+K G D+A + K KRD + + M++ +A GK
Sbjct: 144 DFG-YKNDVFVCSSVLNLYMKCGKMDEAEVLF----GKMAKRDVICWTTMVTGFAQAGKS 198
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVK---LGDLEEAEKLLGQWELSGNTYDFKVP 353
+ ++ ++ + R+ + MLG L LGD + + G +G + V
Sbjct: 199 LKAVEFYREMQN---EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
L+ Y++ G IE A + M+ K T SW + SG KAF+ E
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFK----TAVSWGSLISGFAQNGLANKAFEAVVE--- 308
Query: 414 VLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
++ G++P + +L + ++ + K ++R +L+ +Y +CG
Sbjct: 309 --MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCG 366
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 174/431 (40%), Gaps = 48/431 (11%)
Query: 10 LRNKFHSFTATFQLLRPYC--SASTTVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGH 67
+ KF + +R YC + S++ N NL+ + SP G S + +L + ++G
Sbjct: 16 FKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDK-SP-GRDRESYISLLFGFSRDG- 72
Query: 68 AVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAE 127
R QE +R+ F ++ M +L + EL GR + +
Sbjct: 73 --RTQEAKRL---------FLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121
Query: 128 SYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRT 187
F L D V +L++ Y+ + +MK+ V+ + ++S Y R
Sbjct: 122 --FGFLDDVS----VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT---WTTLISGYARN 172
Query: 188 EQHEKVPDVLAMMKEDGVSPDIFSYRICLN-----SYGARSDLENMEKLLEKIETEGDIA 242
+++V + M+ +G P+ F++ L G R + ++ K + I
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG--LQVHTVVVKNGLDKTIP 230
Query: 243 VDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL 302
V +++ N Y+K G KA I K E K+ V +N MIS YA+ G + + +
Sbjct: 231 VS----NSLINLYLKCGNVRKARILFDKTEVKS----VVTWNSMISGYAANGLDLEALGM 282
Query: 303 WKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSR 362
+ + N + + +++ L +L E+L G +D + L++ YS+
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWR 422
+ A LR + G SW+ + SG + + E+A F E + KG R
Sbjct: 343 CTAMLDA---LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE-----MKRKGVR 394
Query: 423 PKSDVVSSILS 433
P S IL+
Sbjct: 395 PNEFTYSVILT 405
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 18/272 (6%)
Query: 134 SDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKV 193
++ +++ V ALL+ YV G V+++ + D V+ ++ +++ Y +T + E
Sbjct: 422 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA---WSAMLAGYAQTGETEAA 478
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
+ + + G+ P+ F++ LN A + K + + S +
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQ 313
Y K G + A K+ +K D V++N MIS YA G+ + ++K K K
Sbjct: 539 MYAKKGNIESAEEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 314 LNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIG-YSRKGLIEKAETM 372
+I + G +EE EK K N ++ YSR G +EKA +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 373 LRSMVDKGKTPTPNS---W-SIIASGHVAKEN 400
+ +M P P W +I+A+ V K+
Sbjct: 655 IENM------PNPAGSTIWRTILAACRVHKKT 680
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 34/325 (10%)
Query: 160 LSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNS 218
L ++ K++G V + + + ++S + + + E+ D+ + MK GV P+ F+Y + L +
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 219 YGARSDLENMEKLL----EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
S E +++ E+ T G +D YVK G ++A +DK
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDA---------YVKLGKVEEAAKVFSGIDDK 457
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
D VA++ M++ YA G+ + ++++ +L K K + C + +
Sbjct: 458 ----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
++ G S V + LL Y++KG IE AE + + +K SW+ + S
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV----SWNSMIS 569
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVS--SILSWVTDNRDIEEVEDFVNSL 451
G+ KA FKE K + K D V+ + + T +EE E + + +
Sbjct: 570 GYAQHGQAMKALDVFKEM-------KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 452 KK--VMSMNRDMYLSLIKLYVRCGR 474
+ ++ ++ ++ LY R G+
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQ 647
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 114/257 (44%), Gaps = 4/257 (1%)
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVL 197
E G L+ Y AG DK L + M+ G + + + YN I+S + R +++ ++
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAV---DWMTYSTVANF 254
M+E+G+ PDI ++ +++ + + ++ +E + + + + +TY+ +
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 255 YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL 314
+ K GL + A + + +YN + GK + + K D
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y ++ L KLG L +A+ ++G + +G D LL GY G ++ A+++L+
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 375 SMVDKGKTPTPNSWSII 391
M+ P + +I+
Sbjct: 421 EMMRNNCLPNAYTCNIL 437
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 27/304 (8%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM--SLYTRTEQHEKVPDVLAM 199
+G LL+ Y G VD + S +Q+M + + NI+ SL+ E ++L
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE-AEELLRK 456
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAV---------------- 243
M E G D + I ++ +L+ ++++ + G A+
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 244 ------DWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
D +TYST+ N KAG +A + + + D+VAYN I H+ GK
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 298 DMMRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
R+ K ++K C K L +LG +K + E L+ + + G + + N
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIK-NQIFEIHGLMDEMKEKGISPNICTYNTA 635
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLA 416
+ +E A +L M+ K P S+ + + + A + F+ A+++
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 417 ENKG 420
+ +G
Sbjct: 696 QKEG 699
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 146/337 (43%), Gaps = 39/337 (11%)
Query: 165 KMKDMGFVSPLH----------YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
K +++GF L +N+++S YT+ +E+ ++ +E + D F+Y
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
L G R DL+ + +LL + ++ + + + Y K G D+A+ +C++
Sbjct: 154 ALGFCGERCDLD-LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE- 211
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKL--GDL 331
RD V++N +IS Y +G ++ + L K+ +D + C + L G +
Sbjct: 212 ---RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPN--SWS 389
E+ + G +D V LL Y++ G +++A + M P+ N +++
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM------PSKNVVTYN 322
Query: 390 IIASG-----HVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEV 444
+ SG + E +AF+ F + + +G P S +L + + +E
Sbjct: 323 AMISGFLQMDEITDEASSEAFKLFMD-----MQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 445 EDFVNSLKKVMSMNRDMYL--SLIKLYVRCGREVDGV 479
+++L + D ++ +LI+LY G DG+
Sbjct: 378 RQ-IHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G+V + +M+K ++ + P + ++ + + +K +VL M + G PD + +
Sbjct: 164 GAVWGLIEEMRK-ENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFG 222
Query: 214 ICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED 273
L++ +++ KL E + V+ ++++ + + G +A L + +
Sbjct: 223 CLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEE 333
++ D V Y +++S YA+ GK D L + + + Y ++ L K+ +EE
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
A K+ + E D L+ G+ + G I+K +L M+ KG P+ ++ I
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 394 GHVAKENMEKAFQ 406
H KE+ E+ +
Sbjct: 401 AHEKKESFEECLE 413
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAM 199
K++ AL++ ++ ++K+K+ GF + L YN ++ L+ EKV ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-DIAVDWMTYSTVANFYVKA 258
M+++G PD +Y ++ +G D E++E+++E++ +G D V TY V + Y
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV--TTYGAVIDAYCSV 629
Query: 259 GLKDKALIYLKKCE-DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
G D+AL K + V YN +I+ ++ LG + L K+ K ++ R
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL----KEEMKMKMVRP 685
Query: 318 YITMLGCLVK-LGDLEEAEKLL 338
+ L K L + + E LL
Sbjct: 686 NVETYNALFKCLNEKTQGETLL 707
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 104/246 (42%), Gaps = 1/246 (0%)
Query: 165 KMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSD 224
K+++ + + YN ++ Y R + E +V++ MKED + P++ + +
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 225 LENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYN 284
L +E EG + + +TY T+ + +KA+ + +K + DA Y
Sbjct: 457 LNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 285 HMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
+IS + + D +R+ + K+ Y ++G + E+ ++L E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G D N L+ + + E E M+ M + G PT ++ + + + +++A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 405 FQCFKE 410
+ FK+
Sbjct: 636 LKLFKD 641
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAM 199
K++ AL++ ++ ++K+K+ GF + L YN ++ L+ EKV ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-DIAVDWMTYSTVANFYVKA 258
M+++G PD +Y ++ +G D E++E+++E++ +G D V TY V + Y
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV--TTYGAVIDAYCSV 629
Query: 259 GLKDKALIYLKKCE-DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
G D+AL K + V YN +I+ ++ LG + L K+ K ++ R
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL----KEEMKMKMVRP 685
Query: 318 YITMLGCLVK-LGDLEEAEKLL 338
+ L K L + + E LL
Sbjct: 686 NVETYNALFKCLNEKTQGETLL 707
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 104/246 (42%), Gaps = 1/246 (0%)
Query: 165 KMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSD 224
K+++ + + YN ++ Y R + E +V++ MKED + P++ + +
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 225 LENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYN 284
L +E EG + + +TY T+ + +KA+ + +K + DA Y
Sbjct: 457 LNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 285 HMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS 344
+IS + + D +R+ + K+ Y ++G + E+ ++L E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G D N L+ + + E E M+ M + G PT ++ + + + +++A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 405 FQCFKE 410
+ FK+
Sbjct: 636 LKLFKD 641
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
+ YN ++S + + + E V ++ M+EDG+ P + +Y +++Y + +L+ KL +
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ + + + Y+ + N + K G +AL ++ + K + + YN + + L
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLN 698
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+K L KL + ++ ITM + +L +E KL
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 38/290 (13%)
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMS--------------L 183
T ++ L+ Y A +K LS KM + F P H N I+ L
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 184 YTRTEQHEKVPD----------------------VLAMMKEDGVSPDIFSYRICLNSYGA 221
+ + H +P+ + M E V PD+ SY+I + +
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 222 RSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV 281
+ + +LL+ + +G + D ++Y+T+ N + +A L + + K D V
Sbjct: 238 KGQVNGAMELLDDMLNKGFVP-DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW 341
YN MI + + D ++ N + Y T++G L G +E +K L +
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 342 ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
G + F V N L+ G+ G +E+A ++ ++ G+T ++W ++
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 41/283 (14%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y ++ + R K + ++ + PD+F+Y I +N+Y ++ + L E ++
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
D+ D +TYS + N D L ++ E D V Y MI+ Y L
Sbjct: 663 RR-DVKPDVVTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDL 714
Query: 297 KDMMRLWK----------------LQKDNCKKQLNRE------------YITMLGCLVKL 328
K + L+K L K+ ++ L+RE Y ++ K+
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKI 774
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
GDL EA+++ Q SG D L+ + G +++A+ + M++ G P +
Sbjct: 775 GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPY 834
Query: 389 SIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
+ + +G + KA + KE L KG +P +S++
Sbjct: 835 TALIAGCCRNGFVLKAVKLVKEML-----EKGIKPTKASLSAV 872
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M+ V PD+ Y I +N Y +DL+ + L + ++ +I D +TY+ +
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRR-EIVPDVVTYTVL-------- 739
Query: 260 LKDKALIYLKKCEDKAY--KRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
LK+K L + E KA+ K D Y +I +G + R++ ++
Sbjct: 740 LKNKPERNLSR-EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y ++ C K+G L+EA+ + + SG D L+ G R G + KA +++ M+
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 378 DKGKTPTPNSWSIIASGHVAK 398
+KG PT S S + H AK
Sbjct: 859 EKGIKPTKASLSAV---HYAK 876
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
E V+ M++ G+ PD++ Y + + ++ + K+ + ++ + S+
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK-RINCVIVSS 366
Query: 251 VANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNC 310
+ Y + G +A K+ + D V YN LGK ++ + L++
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
Y T++G G +A L+ + + +G T D + N+L G + GL ++A
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
L+ M ++G PT + +++ G + ++KA + F E+L
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESL 527
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAM 199
K++ AL++ ++ ++K+K+ GF + L YN ++ L+ EKV ++L
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-DIAVDWMTYSTVANFYVKA 258
M+++G PD +Y ++ +G D E++E+++E++ +G D V TY V + Y
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV--TTYGAVIDAYCSV 629
Query: 259 GLKDKALIYLKKCE-DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
G D+AL K + V YN +I+ ++ LG + L K+ K ++ R
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL----KEEMKMKMVRP 685
Query: 318 YITMLGCLVK-LGDLEEAEKLL 338
+ L K L + + E LL
Sbjct: 686 NVETYNALFKCLNEKTQGETLL 707
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 4/276 (1%)
Query: 138 KTEKVH-GALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVP 194
K + +H L++ G + ++ + +MK +P + YN ++ Y R + E
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAK 426
Query: 195 DVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
+V++ MKED + P++ + + L +E EG + + +TY T+ +
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHA 485
Query: 255 YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL 314
+KA+ + +K + DA Y +IS + + D +R+ + K+
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y ++G + E+ ++L E G D N L+ + + E E M+
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
M + G PT ++ + + + +++A + FK+
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
+ YN ++S + + + E V ++ M+EDG+ P + +Y +++Y + +L+ KL +
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ + + + Y+ + N + K G +AL ++ + K + + YN + + L
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLN 698
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+K L KL + ++ ITM + +L +E KL
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 117/259 (45%), Gaps = 6/259 (2%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN++++ R E+V V+ + G+ + +Y L+S + + +E++L I
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL-NIM 340
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+ +TY+ + N KA L +A+ + + ++ D V YN ++ + G
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
D + L L K+ C Y +++ L K G +++A +L Q +G D L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLA 416
+ G+ R L+E+A +L+ ++G +++ ++ G K+ +E A + + L
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT--- 517
Query: 417 ENKGWRPKSDVVSSILSWV 435
G +P + ++I+ V
Sbjct: 518 --GGCKPDETIYTAIVKGV 534
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM-SLYTRTEQHEKVPDVLAMMK 201
+ +L+ +V G VD++ + + K++ G + N+M YTR + E+ V ++
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE 344
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ + PD +++ L+S + + ++ I T+ D+ +T + ++N + K G
Sbjct: 345 KRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDL----VTGNLLSNCFSKIGYN 400
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT- 320
AL L K + D Y +S G + ++++K+ KK L+ + +
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKE-KKHLDAHFHSA 459
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ L++LG A L + L D + + G R IE+A ++ M + G
Sbjct: 460 IIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGG 519
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
P ++ I SG ++ EK + +E +
Sbjct: 520 IYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 177/422 (41%), Gaps = 31/422 (7%)
Query: 4 SPFSAILRNKFHSFTATFQLLRPYCSA----STTVTINRRNLYSRISPLGDPSLSVVPVL 59
S FS++L NK T TF L C++ S ++I+++ L + S S S+V +
Sbjct: 32 STFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLY 91
Query: 60 ENWLQEGHA------VRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQ 113
+ HA +R++++ + R + ++ I PG +
Sbjct: 92 AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL- 150
Query: 114 LELIGRVRGLESAESY--FQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF 171
LE++ V + + F + D V ++LN Y V + +M+
Sbjct: 151 LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 172 VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKL 231
VS +N ++S Y ++ +L M+ DG+ PD ++ L+ G DLE M ++
Sbjct: 211 VS---WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLE-MGRM 266
Query: 232 LEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYA 291
L + VD + + Y+K G ++ + L+ +K D V + MIS
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLM 322
Query: 292 SLGKKKDMMRLWK--LQKDNCKKQLNREYI-TMLGCLVKLGDLEEAEKLLGQWELSGNTY 348
LG+ + + ++ LQ + L+ E I +++ +LG + + G G T
Sbjct: 323 RLGRAEKALIVFSEMLQSGS---DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 349 DFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
D N L+ Y++ G ++K+ + M ++ SW+ I SG+ ++ KA F
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLV----SWNAIISGYAQNVDLCKALLLF 435
Query: 409 KE 410
+E
Sbjct: 436 EE 437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 146/345 (42%), Gaps = 43/345 (12%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ +L+N Y G + + ++M++ V H+ ++ Y+R + ++ M+
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEEMRERDVV---HWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLE--KIETEGDIAV------DWMTYSTVAN 253
G+ P G + LE + +LE +++ D AV D +++ N
Sbjct: 140 FQGIKP------------GPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR-LWKLQKDNCKK 312
Y K A K D+ +RD V++N MIS YAS+G ++++ L++++ D +
Sbjct: 188 LYCKCDHVGDA----KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 313 QLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETM 372
+ + L + DLE L Q +G D + L+ Y + G E + +
Sbjct: 244 D-QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 373 LRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
L ++ +K W+++ SG + EKA F E L G S+ ++S++
Sbjct: 303 LETIPNKDVV----CWTVMISGLMRLGRAEKALIVFSEML-----QSGSDLSSEAIASVV 353
Query: 433 SWVTDNRDIE---EVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGR 474
+ + V +V L+ +++ SLI +Y +CG
Sbjct: 354 ASCAQLGSFDLGASVHGYV--LRHGYTLDTPALNSLITMYAKCGH 396
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 127/302 (42%), Gaps = 20/302 (6%)
Query: 176 HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKI 235
++N+ ++ + H++V + M + + PD F++ L + + L + +++
Sbjct: 13 YFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 236 ETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK 295
G + D+ S++ N Y K GL L + +K ++ +RD V + MI Y+ G
Sbjct: 73 LVNG-FSSDFYISSSLVNLYAKFGL----LAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
+ L + + + +T+L L + ++ + + L + G D V N
Sbjct: 128 VGEACSLVNEMR---FQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNS 184
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 415
+L Y + + A+ + M + SW+ + SG+ + NM + + L
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMV----SWNTMISGYASVGNMSEILK-----LLYR 235
Query: 416 AENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYL--SLIKLYVRCG 473
G RP + LS D+E + K + DM+L +LI +Y++CG
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCG 294
Query: 474 RE 475
+E
Sbjct: 295 KE 296
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 157/364 (43%), Gaps = 11/364 (3%)
Query: 90 ALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNC 149
AL V +W ++ + +E +G+++ + S ++ K AL++
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISR 170
Query: 150 -YVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSP 207
Y A V +++ KM++ GF + +N ++ +++ V MK+ P
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 208 DIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIY 267
DI SY I L +G +L ++++ +++ EG D + Y + N + KA ++A+ +
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEG-FEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 268 LKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVK 327
+ E + K + +I+ S K D + ++ K + Y ++G
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 328 LGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNS 387
+E+A K + + L G + + +I+L R ++A + ++M PT ++
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVST 406
Query: 388 WSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDF 447
+ I+ KE ++ A + + E + KG P + SS+++ + ++E ++
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDE-----MKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 448 VNSL 451
N +
Sbjct: 462 FNEM 465
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 131 QNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQ 189
Q+ +S E + +++ +V AG +D++ + +M MG + + YN ++ Y + Q
Sbjct: 443 QDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ 502
Query: 190 HEKVPDVLAMMKED-GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTY 248
++ D+L M ED G+ PD+ SY I ++ D ++ T G IA ++Y
Sbjct: 503 IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRG-IAPTKISY 561
Query: 249 STVANFYVKAGLKDKA-LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQK 307
+T+ + +G A ++ + D K D +A+N ++ Y LG +D R+ K
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMK 621
Query: 308 DN 309
+N
Sbjct: 622 EN 623
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 274 KAYKRDAVAYNHMISHYASLGKKKDMMRL---WKLQKDNCKKQLNREYITMLGCLVKLGD 330
K + D+ Y ++ Y G+ D R+ + Q D Y T++ V G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 331 LEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV-DKGKTPTPNSWS 389
++ A ++L + G + N+LL GY ++ I++AE +LR M D G P S++
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 390 IIASGHVAKENMEKAFQCFKE 410
II G + ++ A F E
Sbjct: 528 IIIDGCILIDDSAGALAFFNE 548
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 117 IGRVRGLESAESYFQNLSDSDKT----EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV 172
+ R R + ES +L +S E + LL Y +AG + S+ ++ D G
Sbjct: 93 LSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK 152
Query: 173 SPLH-YNNIMSLYTRTEQHEKVPDVLAMMKED-GVSPDIFSYRICLNSYGARSDLENMEK 230
+ N ++++ + ++ + V + KE G++P+IF+ + + + ++D+E+ K
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
+L++I + G + + +TY+T+ YV G + A L++ D+ + DA Y ++ Y
Sbjct: 213 VLDEIPSMG-LVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 291 ASLGK 295
LG+
Sbjct: 272 CKLGR 276
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 16/291 (5%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHY-NNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L+ C VD+++ MK+ GF N+I++L +R + E A M
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
+ +++++ I +N L+ + L +E G I +TY+T+ + G + A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG-IKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK---LQKDNCKKQLNREYITM 321
+ + + + K ++ D YN ++S + G+ +++R K L D+ I +
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYN-----ILI 334
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
GC GDLE A + G F N L+ G + IE AE ++R + +KG
Sbjct: 335 RGC-SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
+++I+ +G+ + +KAF E + G +P +S++
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMT-----DGIQPTQFTYTSLI 439
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 15/289 (5%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G ++ + + +M G V + YN ++ + E ++ ++E G+ D +Y
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
I +N Y D + L +++ T+G I TY+++ + +A +K
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDG-IQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVK----L 328
K K D V N ++ + ++G +M R + L K+ +N + +T CL++
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIG---NMDRAFSLLKEMDMMSINPDDVT-YNCLMRGLCGE 515
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
G EEA +L+G+ + G D N L+ GYS+KG + A + M+ G PT ++
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 389 SIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
+ + G + E A + +E +++G P S++ +++
Sbjct: 576 NALLKGLSKNQEGELAEELLRE-----MKSEGIVPNDSSFCSVIEAMSN 619
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 114/250 (45%), Gaps = 15/250 (6%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+N ++++ + + +K L +M+ G+ P I +Y + + R +E ++ +++
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
++G D TY+ + ++ G +A L++ ++ D+V+YN +I ++ G
Sbjct: 288 SKG-FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNG-- 341
Query: 297 KDMMRLWKLQKDNCKKQL---NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
D+ + + + K+ + Y T++ L +E AE L+ + G D
Sbjct: 342 -DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
NIL+ GY + G +KA + M+ G PT +++ + K +A + F++ +
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 414 VLAENKGWRP 423
KG +P
Sbjct: 461 -----KGMKP 465
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y +M + E+ ++ +L M+ +G SP Y + ++ + DL + KL++ +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+G + + +TY+T+ + G DKA+ L++ + V Y +I+ +
Sbjct: 285 LKGCVP-NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 297 KDMMRLWKLQKDNCKKQLNRE-YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
D +RL ++ LN+ Y ++ L K G EEA L + G + V ++
Sbjct: 344 TDAVRLLSSMEER-GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
L+ G R+G +A+ +L M+ G P ++S + G E+A Q +KE
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMK 201
+G L+N V ++ + M++ G+ H Y+ ++S + + E+ + M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
E G P+I Y + ++ +++L ++ G + + TYS++ + K GL
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP-NAYTYSSLMKGFFKTGLC 448
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
++A+ K+ + R+ Y+ +I +G+ K+ M +W K Y ++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 322 LGCLVKLGDLEEAEKLLGQW---ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
+ L +G ++ A KL + E + D NILL G + I +A +L SM+D
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAV 414
+G P + + + K N + F E L V
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 112/281 (39%), Gaps = 52/281 (18%)
Query: 130 FQNLSDSDKTEKVHGALL---------------NCYVMAGSVDKSLSQMQKMKDMGF-VS 173
+ NL +DK + GALL GS+ + S + MK G +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+ YNN+M Y +T Q KV +++ M+ G+SPD+ +Y I ++S R ++ +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
++ G + + ++ V + K G +A I D K D V + ++ Y
Sbjct: 538 ELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY--- 593
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
CK Q +E+A L + +G D +
Sbjct: 594 ----------------CKAQ----------------RMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASG 394
N L+ GY G IEKA ++ MV +G P ++ + G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 149/373 (39%), Gaps = 28/373 (7%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLEL---IGRVRGLESAESYFQNLSDSD 137
+R RK AL+++ + G+ P R V + L I RV GLE A + +++
Sbjct: 212 IRERK-VNMALKLTYKVDQFGIFP----SRGVCISLLKEILRVHGLELAREFVEHMLS-- 264
Query: 138 KTEKVHGALLNCYVMA----GSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHE 191
+ ++ A+L+ ++ G DK + MK G + P + + + + +
Sbjct: 265 RGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG-IRPDIVAFTVFIDKLCKAGFLK 323
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
+ VL +K G+S D S ++ + E KL+ +I V YS+
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV----YSSF 379
Query: 252 ANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK-KDMMRLWKLQKDNC 310
+ G +A ++ + D V Y MI Y +LG+ K L K
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
L I ++G + G + +AE + + G D N L+ GY + + K
Sbjct: 440 PPSLTTSTI-LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
++ M G +P +++I+ V + +++A + E + +G+ P + +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI-----RRGFVPSTLAFTD 553
Query: 431 ILSWVTDNRDIEE 443
++ + D +E
Sbjct: 554 VIGGFSKRGDFQE 566
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 112/281 (39%), Gaps = 52/281 (18%)
Query: 130 FQNLSDSDKTEKVHGALL---------------NCYVMAGSVDKSLSQMQKMKDMGF-VS 173
+ NL +DK + GALL GS+ + S + MK G +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
+ YNN+M Y +T Q KV +++ M+ G+SPD+ +Y I ++S R ++ +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
++ G + + ++ V + K G +A I D K D V + ++ Y
Sbjct: 538 ELIRRGFVP-STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY--- 593
Query: 294 GKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVP 353
CK Q +E+A L + +G D +
Sbjct: 594 ----------------CKAQ----------------RMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASG 394
N L+ GY G IEKA ++ MV +G P ++ + G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 149/373 (39%), Gaps = 28/373 (7%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLEL---IGRVRGLESAESYFQNLSDSD 137
+R RK AL+++ + G+ P R V + L I RV GLE A + +++
Sbjct: 212 IRERK-VNMALKLTYKVDQFGIFP----SRGVCISLLKEILRVHGLELAREFVEHMLS-- 264
Query: 138 KTEKVHGALLNCYVMA----GSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHE 191
+ ++ A+L+ ++ G DK + MK G + P + + + + +
Sbjct: 265 RGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG-IRPDIVAFTVFIDKLCKAGFLK 323
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
+ VL +K G+S D S ++ + E KL+ +I V YS+
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV----YSSF 379
Query: 252 ANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK-KDMMRLWKLQKDNC 310
+ G +A ++ + D V Y MI Y +LG+ K L K
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
L I ++G + G + +AE + + G D N L+ GY + + K
Sbjct: 440 PPSLTTSTI-LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
++ M G +P +++I+ V + +++A + E + +G+ P + +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI-----RRGFVPSTLAFTD 553
Query: 431 ILSWVTDNRDIEE 443
++ + D +E
Sbjct: 554 VIGGFSKRGDFQE 566
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 175 LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEK 234
+ + ++ ++ + + + + M V PD+F+Y +N ++ +++L+
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 235 IETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG 294
+ T+G + D +TY+T+ N + K+ D+ ++ + D + YN +I Y G
Sbjct: 305 MVTKGCLP-DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPN 354
+ ++ + + + + R Y +L L +E+A L + S D N
Sbjct: 364 RPDAAQEIF--SRMDSRPNI-RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 355 ILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
I++ G + G +E A + RS+ KG P S++ + SG K +K+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/267 (17%), Positives = 115/267 (43%), Gaps = 2/267 (0%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+ ++NC +LS + KM G+ + +++++ + + + D+++ M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
E G PD+ Y ++ + + +L +++E +G + D +TY+++ +G
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG-VRADAVTYNSLVAGLCCSGRW 225
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
A ++ + + + + +I + GK + M+L++ C Y ++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ L G ++EA+++L G D N L+ G+ + +++ + R M +G
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCF 408
+++ I G+ + A + F
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIF 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
A+++ +V G +++ ++M V P YN++++ + ++ +L +M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G PD+ +Y +N + ++ KL ++ G + D +TY+T+ Y +AG D
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG-DTITYNTIIQGYFQAGRPD 366
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYITM 321
A + + + R Y+ ++ + + + L++ +QK + + I +
Sbjct: 367 AAQEIFSRMDSRPNIR---TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
G + K+G++E+A L G D ++ G+ RK +K++ + R M + G
Sbjct: 424 HG-MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 382 TP 383
P
Sbjct: 483 LP 484
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 139/344 (40%), Gaps = 47/344 (13%)
Query: 83 TRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDSD--KTE 140
T R+ A+QV E + + G + ++G+ + E A FQ + +
Sbjct: 126 TALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNH 185
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP-LH-YNNIMSLYTRTEQHEKVPDVLA 198
+V+ AL++ Y +G D + + +++MK P +H Y+ ++ + + +KV D+L+
Sbjct: 186 EVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLS 245
Query: 199 MMKEDGVSPDIFSYRICLNSY------------------------------------GAR 222
M+ G+ P+ +Y +++Y G
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGN 305
Query: 223 SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVA 282
+E ME EK ++ G I + T++ + + Y K+G K ++ + Y V
Sbjct: 306 GQIEMMENCYEKFQSSG-IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 283 YNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE 342
YN +I + G K M L++L + +++ +T+ + G +A+K+ G
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQS---ERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Query: 343 LSGNT---YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
N+ D N L+ Y R + + +L M KG P
Sbjct: 422 FIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKP 465
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 173/378 (45%), Gaps = 20/378 (5%)
Query: 136 SDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVP 194
S T V L+ CY ++ +++ D GF +S + N ++ ++++ + V
Sbjct: 160 SSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVW 219
Query: 195 DVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
+ + + P+ + RI + L+ + LL++I G + + +T F
Sbjct: 220 RIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRIC--GKRCLPSVIVNTSLVF 277
Query: 255 YVKAGLK-DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQ 313
V ++ ++++ LK+ K D + Y+ ++ YA K+ D++ K+ + ++
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV--YAK-AKEGDLVSARKVFDEMLQRG 334
Query: 314 LNRE---YITMLGCLVKLGDLEEAEKLLGQWELSG-NTYDFKVPNILLIGYSRKGLIEKA 369
+ Y + + GD++EAE+LL + E SG + YD + N L+ G++R G EK
Sbjct: 335 FSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD-ETFNCLIGGFARFGWEEKG 393
Query: 370 ETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVS 429
MV +G P+ ++++ + EN+ +A + +++ +KG+ P S
Sbjct: 394 LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI-----DKGFVPDEHTYS 448
Query: 430 SILSWVTDNRDIEE-VEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDG--VLESMKAD 486
++ + DI++ ++ F + MS +++ SLI CG+ G L+ MK
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Query: 487 NIELDEEMEEILNSRLQQ 504
IE + ++ + L Q+
Sbjct: 509 LIEPNADIYDALIKAFQK 526
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 37/256 (14%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
V L+ Y+ G V++ +++ D GF VS + N++++ + + E V ++M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
G+ P+ +++ I N + S+ ++ LEK+E EG
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG--------------------- 266
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
++ D V YN ++S Y G+ K+ L+K+ Y +
Sbjct: 267 ---------------FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTS 311
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ L K G + EA + + G D N L+ Y ++G++++++ +L M+
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 381 KTPTPNSWSIIASGHV 396
P + +I G V
Sbjct: 372 VVPDRFTCKVIVEGFV 387
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 2/214 (0%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+N + +++ +V D L M+E+G PD+ +Y ++SY R L+ L KI
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE-AFYLYKIM 297
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
+ D +TY+++ K G +A + D+ K D ++YN +I Y G
Sbjct: 298 YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
+ +L N ++ V+ G L A + + F+V + L
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFL 417
Query: 357 LIGYSRKGLIEKAETML-RSMVDKGKTPTPNSWS 389
++ ++G A+ +L R + ++G P +++
Sbjct: 418 IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYN 451
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 159/393 (40%), Gaps = 52/393 (13%)
Query: 89 QALQVSEWMSSKGLCPILPGDRAVQL--ELIGRVRGLESAESYFQNLSDSD---KTEKVH 143
+AL++ + + G+ ++P D ++ LIG R ++ +F L H
Sbjct: 164 KALEIFVYSTQLGV--VIPQDSVYRMLNSLIGSDR-VDLIADHFDKLCRGGIEPSGVSAH 220
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
G +L+ G V K+L + + + GF V + N ++ + +Q E +L+++ +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLD 279
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G +P++ ++ +N + R +++ L + +E G I D + YST+ + Y KAG+
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG-IEPDLIAYSTLIDGYFKAGMLG 338
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
+ K K D V ++ I Y
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVY-------------------------------- 366
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKT 382
VK GDL A + + G + + IL+ G + G I +A M ++ +G
Sbjct: 367 ---VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 383 PTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
P+ ++S + G N+ F +++ + + G+ P + ++ ++ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-----GYPPDVVIYGVLVDGLSKQGLML 478
Query: 443 EVEDF-VNSLKKVMSMNRDMYLSLIKLYVRCGR 474
F V L + + +N ++ SLI + R R
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 172 VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKL 231
+S + YN ++S + + + EK + + M + G PD+ +Y + LN Y + L+ E +
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 232 LEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYL-KKCEDKAYKRDAVAYNHMISHY 290
+ ++ G I +D +Y+ + + + DK ++ K+ E + + D V+Y+ +I +
Sbjct: 278 MAEMVRSG-IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETF 335
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDF 350
+ RL++ + Y +++ ++ G+ A+KLL Q G + D
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 351 KVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+L + G ++KA + M++ TP S++ + SG + +A + F++
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 157 DKSLSQMQK-MKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRIC 215
DK + M K M+ GF + Y+ ++ + R K + M++ G+ ++ +Y
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 216 LNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKA 275
+ ++ + +KLL+++ TE ++ D + Y+T+ + K+G DKA +
Sbjct: 367 IKAFLREGNSSVAKKLLDQM-TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 276 YKRDAVAYNHMISHYASLGKKKDMMRLWK--LQKDNCKKQLNREYITMLGCLVKLGDLEE 333
DA++YN +IS G+ + ++L++ K+ C +L ++I +G L++ L
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI--IGGLIRGKKLSA 483
Query: 334 AEKLLGQWELSGNTYDFKVPNILL 357
A K+ Q G T D V + L+
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLI 507
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 33/338 (9%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
+LL+ Y +G ++ + ++ D V+ + + S YT + +H + D+ M E G
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVT---WTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
V PD + L++ DL++ E +++ +E E ++ + +T+ N Y K G +KA
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLG 323
+ D ++D V ++ MI YAS K+ + L+ ++ ++N K + L
Sbjct: 267 ----RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD-QFSIVGFLS 321
Query: 324 CLVKLGDLEEAEKLLGQWELS-GNTYDFK----VPNILLIGYSRKGLIEKAETMLRSMVD 378
LG L+ LG+W +S + ++F + N L+ Y++ G + + + + M +
Sbjct: 322 SCASLGALD-----LGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 379 KGKTPTPNSWSIIA-SGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTD 437
K + S +A +GHV + +F F + E G P +L
Sbjct: 377 KDIVIMNAAISGLAKNGHV-----KLSFAVFGQ-----TEKLGISPDGSTFLGLLCGCVH 426
Query: 438 NRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYVRCG 473
I++ F N++ V ++ R + Y ++ L+ R G
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 159/393 (40%), Gaps = 52/393 (13%)
Query: 89 QALQVSEWMSSKGLCPILPGDRAVQL--ELIGRVRGLESAESYFQNLSDSD---KTEKVH 143
+AL++ + + G+ ++P D ++ LIG R ++ +F L H
Sbjct: 164 KALEIFVYSTQLGV--VIPQDSVYRMLNSLIGSDR-VDLIADHFDKLCRGGIEPSGVSAH 220
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
G +L+ G V K+L + + + GF V + N ++ + +Q E +L+++ +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLD 279
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G +P++ ++ +N + R +++ L + +E G I D + YST+ + Y KAG+
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG-IEPDLIAYSTLIDGYFKAGMLG 338
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
+ K K D V ++ I Y
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVY-------------------------------- 366
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKT 382
VK GDL A + + G + + IL+ G + G I +A M ++ +G
Sbjct: 367 ---VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 383 PTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
P+ ++S + G N+ F +++ + + G+ P + ++ ++ +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-----GYPPDVVIYGVLVDGLSKQGLML 478
Query: 443 EVEDF-VNSLKKVMSMNRDMYLSLIKLYVRCGR 474
F V L + + +N ++ SLI + R R
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLN-SYGARSDLENMEK----- 230
+N+++ + R + ++ V +M G+ PD+ ++ + S + ++M+
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 231 ---LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI 287
L+++ + DIAV + V + K + A + + + D V YN MI
Sbjct: 559 LFDLMQRNKISADIAV----CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
Y SL + + R+++L K ++ L K D++ A ++ G+
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
+ L+ +S+ IE + + M +KG +P+ S+SII G + +++A
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 408 FKEAL 412
F +A+
Sbjct: 735 FHQAI 739
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 240 DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
++ + T++ + YV+AGL +A+ + ED D +A++ +IS+ + + +
Sbjct: 181 NVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA 240
Query: 300 MRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIG 359
+ KD + + Y ++ + G++ EAEK+ + +L+G + +I++
Sbjct: 241 QSFFDSLKDRFEPDV-IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 360 YSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENK 419
R G I +A + M+D G P +++ + HV EK Q + + +
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ-----MKKL 354
Query: 420 GWRPKSDVVSSILSWVTDNRDIEEVEDFVNS-LKKVMSMNRDMYLSLIKLYVRCGREVDG 478
G P + + ++ + ++E +N+ +KK +N + ++ + Y+ R+V+G
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR-YIEKKRDVNG 413
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 7/272 (2%)
Query: 119 RVRGLESAESYFQ--NLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPL 175
R + AE F+ L+ + + +++ G + ++ M D G + +
Sbjct: 267 RAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 176 HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKI 235
+NN+M ++ + + EKV V MK+ G PD +Y + ++ +LEN K+L +
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 236 ETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK 295
+ V+ T++T+ + K + A K + + + V YN ++ + K
Sbjct: 387 -IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVG-SK 444
Query: 296 KKDMMRLWKLQKDNCKKQLN-REYITMLGCLVKLGDLEEAEKLLGQW-ELSGNTYDFKVP 353
DM+ K + D+ + + N Y ++ +G A KL + E T +
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 354 NILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
++L R G ++K E ++ M+ KG P
Sbjct: 505 EMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 119/279 (42%), Gaps = 13/279 (4%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
Y N++ + R + + V MK G+ P++++Y I +++ + + +
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI-SHYASLGK 295
G A + +T++ + +VKAG +K L + + + D + YN +I +H
Sbjct: 318 DSG-CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENL 376
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL---LGQWELSGNTYDFKV 352
+ + L + K C+ + + T+ + K D+ A ++ + + + NT + +
Sbjct: 377 ENAVKVLNTMIKKKCEVNAS-TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 353 PNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL 412
+ +G ++ K M + M DK P N++ ++ + + A++ FKE
Sbjct: 436 LMRMFVGSKSTDMVLK---MKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE-- 490
Query: 413 AVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
+ E K P + +L+ + +++ E+ V +
Sbjct: 491 --MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 134/308 (43%), Gaps = 9/308 (2%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
+ KT K+F A M G P + A L+G+ R ++ A +++ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR-VDIALRFYREMRRC 232
Query: 137 DKTEKVH--GALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKV 193
+ + +++ Y +G +DK + +Q M+ +GF + + YN +++ +
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
+ MM + G+ P++ ++ ++ + L+ K+ +++ ++A + +TY+T+ N
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV-NVAPNTVTYNTLIN 351
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKK 312
Y + G + A + + +RD + YN +I K + + K L K+N
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 313 QLNREYITMLG-CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ ++G C+ K D +L SG + + N+L+ + R + A
Sbjct: 412 NSSTFSALIMGQCVRKNAD--RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 372 MLRSMVDK 379
+LR MV +
Sbjct: 470 VLREMVRR 477
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 173/433 (39%), Gaps = 61/433 (14%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDR-----AVQLELIGRVRGLESAESYFQNL-- 133
L+ +K + +L+ W ++ PG A+ L + + R +SAES +++
Sbjct: 89 LKIQKDYLLSLEFFNWAKTRN-----PGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 134 -SDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEK 192
D KV ALL Y S +P ++++ + ++
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDS-----------------TPRVFDSLFKTFAHLKKFRN 186
Query: 193 VPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVA 252
D MK+ G P + S ++S + ++ + ++ I+ + T + V
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR-RCKISPNPYTLNMVM 245
Query: 253 NFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG------KKKDMMRLWKLQ 306
+ Y ++G DK + L+ E ++ V+YN +I+ + G K K+MM LQ
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 307 KDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE---LSGNTYDFKVPNILLIGYSRK 363
+ + T++ + L+EA K+ G+ + ++ NT + N L+ GYS++
Sbjct: 306 PNVV------TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY---NTLINGYSQQ 356
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G E A MV G +++ + G + KA Q KE + + P
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-----LDKENLVP 411
Query: 424 KSDVVSSIL--SWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDG--- 478
S S+++ V N D E + + ++ N + L+ + R + DG
Sbjct: 412 NSSTFSALIMGQCVRKNAD-RGFELYKSMIRSGCHPNEQTFNMLVSAFCR-NEDFDGASQ 469
Query: 479 VLESMKADNIELD 491
VL M +I LD
Sbjct: 470 VLREMVRRSIPLD 482
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 134/308 (43%), Gaps = 9/308 (2%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
+ KT K+F A M G P + A L+G+ R ++ A +++ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR-VDIALRFYREMRRC 232
Query: 137 DKTEKVH--GALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKV 193
+ + +++ Y +G +DK + +Q M+ +GF + + YN +++ +
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
+ MM + G+ P++ ++ ++ + L+ K+ +++ ++A + +TY+T+ N
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV-NVAPNTVTYNTLIN 351
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKK 312
Y + G + A + + +RD + YN +I K + + K L K+N
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 313 QLNREYITMLG-CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ ++G C+ K D +L SG + + N+L+ + R + A
Sbjct: 412 NSSTFSALIMGQCVRKNAD--RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 372 MLRSMVDK 379
+LR MV +
Sbjct: 470 VLREMVRR 477
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 173/433 (39%), Gaps = 61/433 (14%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDR-----AVQLELIGRVRGLESAESYFQNL-- 133
L+ +K + +L+ W ++ PG A+ L + + R +SAES +++
Sbjct: 89 LKIQKDYLLSLEFFNWAKTRN-----PGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 134 -SDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEK 192
D KV ALL Y S +P ++++ + ++
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDS-----------------TPRVFDSLFKTFAHLKKFRN 186
Query: 193 VPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVA 252
D MK+ G P + S ++S + ++ + ++ I+ + T + V
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR-RCKISPNPYTLNMVM 245
Query: 253 NFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLG------KKKDMMRLWKLQ 306
+ Y ++G DK + L+ E ++ V+YN +I+ + G K K+MM LQ
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 307 KDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE---LSGNTYDFKVPNILLIGYSRK 363
+ + T++ + L+EA K+ G+ + ++ NT + N L+ GYS++
Sbjct: 306 PNVV------TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY---NTLINGYSQQ 356
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRP 423
G E A MV G +++ + G + KA Q KE + + P
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-----LDKENLVP 411
Query: 424 KSDVVSSIL--SWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDG--- 478
S S+++ V N D E + + ++ N + L+ + R + DG
Sbjct: 412 NSSTFSALIMGQCVRKNAD-RGFELYKSMIRSGCHPNEQTFNMLVSAFCR-NEDFDGASQ 469
Query: 479 VLESMKADNIELD 491
VL M +I LD
Sbjct: 470 VLREMVRRSIPLD 482
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 12/243 (4%)
Query: 172 VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKL 231
++P+ ++ ++ Y + EK D+ M GV P ++Y L + +++ KL
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD-GKL 124
Query: 232 LEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYA 291
+ D A D + + +FY K G + A+ K D+ KRD VA+N MIS ++
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI----KVFDEMPKRDMVAWNAMISGFS 180
Query: 292 SLGKKKDMMRLWKLQK--DNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYD 349
D++ L+ + D L+ + M L + G L E + + G G + D
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLS-TIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 350 FKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
V +L Y++ I A R + D +WS + G+V E +++A + F
Sbjct: 240 LVVKTGILDVYAKSKCIIYA----RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 410 EAL 412
+ L
Sbjct: 296 QML 298
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 44/273 (16%)
Query: 177 YNNIMSLYTRTEQHEK-------------VPDVLA------------------------M 199
YN +M +Y+R+ + K VPD+++ M
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
++ G+ PD +Y L++ S+L+ K+ E +E D TY+ + + Y + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH-RCQPDLWTYNAMISVYGRCG 346
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREY 318
L +A + E K + DAV YN ++ +A + + ++ ++QK K Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD-EMTY 405
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWE-LSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
T++ K G L+ A +L + LSG D +L+ + +A ++ M+
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 378 DKGKTPTPNSWSIIASGHV---AKENMEKAFQC 407
D G PT ++S + G+ +E E F C
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSC 498
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 17/309 (5%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
+ A+++ Y G ++ +++ GF + YN+++ + R EKV +V M
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
++ G D +Y ++ YG + L+ +L + ++ D +TY+ + + KA
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
+A + + D K Y+ +I YA GK+++ + + K N Y
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK- 379
ML L++ + +A L G+T + + ++++G ++ + + +R M +
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC 573
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL--AENKGWRPKSDVVSSIL-SWVT 436
G P S S++ G +CF A L A G+ ++D + SIL S+ +
Sbjct: 574 GMNPLEIS-SVLVKG-----------ECFDLAARQLKVAITNGYELENDTLLSILGSYSS 621
Query: 437 DNRDIEEVE 445
R E E
Sbjct: 622 SGRHSEAFE 630
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 150 YVMAGSVDKSLSQMQKMKDMGFVSPL-HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPD 208
Y A VD+++ M+ L +N ++S +++ K +V M+ D +PD
Sbjct: 178 YARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPD 236
Query: 209 IFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYL 268
+Y I L +G +L ++ ++ G D +TYS + + KAG D+AL +
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAG-CHPDIVTYSIMVDILCKAGRVDEALGIV 295
Query: 269 KKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKL 328
+ + K Y+ ++ Y + +
Sbjct: 296 RSMDPSICKPTTFIYSVLVHTYGTENR--------------------------------- 322
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
LEEA + E SG D V N L+ + + ++ +L+ M KG TP S
Sbjct: 323 --LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 389 SIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFV 448
+II + + ++AF F++ + V P +D + ++ + +++E +
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIKVC------EPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 449 NSLKK 453
++K
Sbjct: 435 KYMRK 439
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 17/280 (6%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M G PD+ ++ +N + LL ++E E + + +TY+T+ + KA
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-EMSVYPNHVTYTTLVDSLFKAN 308
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
+ AL + + D V Y ++ G ++ + +K+ ++ + Y
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI-----LLIGYSRKGLIEKAETMLR 374
++ L K GDL AE ++ Q L + +PN+ ++ GY +KG++E+A ++LR
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQM-LEKSV----IPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSW 434
M D+ P ++ + G E A + KE + E + ++ ++++
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY-----ILDALVNH 478
Query: 435 VTDNRDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYVRCG 473
+ I+EV+ V + K +++++ Y SLI ++ + G
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVL 197
+ +V+ L+ G K+ M M+ GF+ + +N++M Y K
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
++M E G+SP++ +Y + ++ ++K L ++++ G + D TY+ + + K
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-MRPDDFTYNALISGQAK 795
Query: 258 AG-LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN- 315
G +K IY + D + + YN +IS +A++GK M++ +L K+ K+ ++
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTS-TYNVLISEFANVGK---MLQARELLKEMGKRGVSP 851
Query: 316 --REYITMLGCLVKL 328
Y TM+ L KL
Sbjct: 852 NTSTYCTMISGLCKL 866
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M+E G+ PDI ++ I +NS + D E + KL +K+++ G I M+ + V + G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG-IKPSLMSCNIVVGMLCENG 622
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE-Y 318
++A+ L + + Y + +S K+ D + + +L+R+ Y
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFLDT-SSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
T++ L KLG ++A ++G E G D N L+ GY + KA + M++
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 379 KGKTPTPNSWSIIASG 394
G +P +++ I G
Sbjct: 742 AGISPNVATYNTIIRG 757
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 144/336 (42%), Gaps = 52/336 (15%)
Query: 173 SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLL 232
S L YN ++ + KV + ++ G+ PD F+ + L S G + EK +
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK-V 68
Query: 233 EKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS 292
+ + D +++ Y G + K D+ +RD V++N +IS Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLG----KIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 293 LGKKKDMMRLWKL--QKDNCKKQLNREYITMLGCLVKLGDLEEAEKL----LGQWELSGN 346
G+ +D + ++K Q+ N K T+ C L +LE E++ + ++E+S
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSAC-SALKNLEIGERIYRFVVTEFEMS-- 181
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA-- 404
++ N L+ + + G ++KA + SM DK W+ + G+V+ +++A
Sbjct: 182 ---VRIGNALVDMFCKCGCLDKARAVFDSMRDK----NVKCWTSMVFGYVSTGRIDEARV 234
Query: 405 ----------------------FQCFKEALAVL--AENKGWRPKSDVVSSILSWVTDNRD 440
F F EAL + + G RP + V+ S+L+
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 441 IEE---VEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+E+ + ++N + +++++ + +L+ +Y +CG
Sbjct: 295 LEQGKWIHGYINENR--VTVDKVVGTALVDMYAKCG 328
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 176/414 (42%), Gaps = 65/414 (15%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAES----YFQN 132
++ L + R + A ++ + M+ +G+ P +R LI + SA+ +++
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISP----NRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 133 LSDSDKTEKV-HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQH 190
+ + + V H ALL+ + G + ++ ++ + GFV L Y++++ R ++
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
+ ++ A M + + PDI Y I + +E+ KLL + ++G I+ D Y+
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG-ISPDTYCYNA 378
Query: 251 VANFYVKAGLKDKAL-IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKD 308
V GL ++ + L+ E +++ DA + +I G ++ ++ +++K
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFP-DACTHTILICSMCRNGLVREAEEIFTEIEKS 437
Query: 309 NCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWEL------------------------- 343
C + + ++ L K G+L+EA LL + E+
Sbjct: 438 GCSPSVA-TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESG 496
Query: 344 --------------SGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWS 389
+G++ D N+L+ G+ R G I+ A +L + KG +P +++
Sbjct: 497 SILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
Query: 390 IIASG--HVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
+ +G V +E E+AF+ F +R V S+++W R +
Sbjct: 557 TLINGLHRVGRE--EEAFKLF-------YAKDDFRHSPAVYRSLMTWSCRKRKV 601
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 197 LAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYV 256
LA + G SPDI SY + +N + D++ KLL ++ +G ++ D +TY+T+ N
Sbjct: 505 LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG-LSPDSVTYNTLINGLH 563
Query: 257 KAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK--LQKDNCKKQL 314
+ G +++A +D ++ Y +++ K LW L+K +C L
Sbjct: 564 RVGREEEAFKLFYAKDD--FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISC---L 618
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
+ E + K G+ E A + L + + + I LIG + G +A +
Sbjct: 619 DDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678
Query: 375 SMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSW 434
+ +K TP S + G +E ++ A + F L L N P+ V + +LS
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF---LYTLDNNFKLMPR--VCNYLLSS 733
Query: 435 VTDNRD-IEEVEDFVNSLKK 453
+ ++ + +E V N +++
Sbjct: 734 LLESTEKMEIVSQLTNRMER 753
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 30/298 (10%)
Query: 180 IMSLYTRTEQHEKVPDVLAMMKED---GVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
+ S++ + + DVL + ++ G+ PD FS+ + + S G L + L+EK+
Sbjct: 74 VNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL--FQALVEKLG 131
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
D V + + + YVK + A +K D+ +R +N MIS Y G K
Sbjct: 132 FFKDPYVR----NVIMDMYVKHESVESA----RKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW-ELSGNTYDFKVPNI 355
++ +L+ + +N + M+ K+ DLE A K + E S ++ N
Sbjct: 184 EEACKLFDMMPENDVV----SWTVMITGFAKVKDLENARKYFDRMPEKSVVSW-----NA 234
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 415
+L GY++ G E A + M+ G P +W I+ S + + +L L
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD-----PSLTRSLVKL 289
Query: 416 AENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+ K R V +++L RDI+ N L N + ++I Y R G
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT--QRNLVTWNAMISGYTRIG 345
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 111/287 (38%), Gaps = 45/287 (15%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M E G PD+ ++ +N + L++++ EG Y T+ N K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG-----HQPYGTIINGLCKMG 55
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW---------------- 303
+ AL L K E+ K V YN +I G L+
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 304 ----------------KLQKDNCKKQLNREYIT---MLGCLVKLGDLEEAEKLLGQWELS 344
+L +D ++Q+N + +T ++ LVK G + EAE++ G
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G N ++ G+ ++ + A+ ML SM K +P ++S + +G+ + ++
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 405 FQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
+ F E +G + ++++ D++ +D +N +
Sbjct: 236 MEIFCE-----MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 111/265 (41%), Gaps = 4/265 (1%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
+G ++N G + +L+ + KM++ + YN I+ + H ++ M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ G+ PD+ +Y ++S+ + E+LL + E I D +T+S + N VK G
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM-IERQINPDVVTFSALINALVKEGKV 162
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYIT 320
+A + + YN MI + + D R+ + +C + + T
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV-VTFST 221
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
++ K ++ ++ + G + L+ G+ + G ++ A+ +L M+ G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 381 KTPTPNSWSIIASGHVAKENMEKAF 405
P ++ + + +K+ + KAF
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAF 306
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 33/289 (11%)
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G SPDI +Y + +Y DL +++ ++ +G I ++ +T +T+ + K D+
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG-IKMNTITLNTILDALCKERKLDE 469
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
A L + + D V Y +I + K + + +W K + +++G
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 324 CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
L G E A + + SG D N +++GY ++G +EKA + P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 384 TPNSWSIIASGHVAKENM-EKAFQCF---------------------------KEALAVL 415
+ +I+ +G + KE M EKA F KEA +L
Sbjct: 590 DNYTCNILLNG-LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 416 A--ENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLK-KVMSMNRDM 461
+ E KG P +S +S + ++ + E ++ + K SM RD+
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDL 697
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 134/324 (41%), Gaps = 49/324 (15%)
Query: 166 MKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY----G 220
MK G V + + YNN++ Y + ++ ++ +MK+ V PD+ +Y I +N
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 221 ARSDLENME-------------------------------KLLEKIETEGDIAVDWMTYS 249
R LE M+ KL+E++E +G + + +T++
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG-VKANQVTHN 384
Query: 250 TVANFYVKAGLKDKALIYLKKCED-KAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKD 308
+ K ++ +K+ D + D V Y+ +I Y +G D+ ++ ++
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG---DLSGALEMMRE 441
Query: 309 NCKKQLNREYITM---LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGL 365
+K + IT+ L L K L+EA LL G D L++G+ R+
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 366 IEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKS 425
+EKA M M TPT ++++ + G E A + F E LAE+ G P
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE----LAES-GLLPDD 556
Query: 426 DVVSSILSWVTDNRDIEEVEDFVN 449
+SI+ +E+ +F N
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYN 580
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 140/350 (40%), Gaps = 51/350 (14%)
Query: 147 LNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSL----YTRTEQHEKVPDVLAMMKE 202
L+ Y+ G +L QKM + L N + + Y + +V M +
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG-LK 261
GVS ++ ++ + +N Y LE+ +LE++ +E + D +TY+T+ K G L
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 262 D--KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDN---------- 309
D + L+ +KK + V YN+++ Y LG K+ ++ +L K
Sbjct: 258 DLKELLLDMKK---NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 310 ------CKKQLNRE-------------------YITMLGCLVKLGDLEEAEKLLGQWELS 344
C RE Y T++ +LG EA KL+ Q E
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD-KGKTPTPNSWSIIASGHVAKENMEK 403
G + NI L ++ E ++ +VD G +P ++ + ++ ++
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 404 AFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKK 453
A + +E KG + + +++IL + R ++E + +NS K
Sbjct: 435 ALEMMRE-----MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 10/262 (3%)
Query: 156 VDKSLSQMQKMKDM---GFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
V++ L + +K +DM GF + I+SLY + E V M + S+
Sbjct: 93 VEEILEEQKKYRDMSKEGFAA-----RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSF 147
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
L++Y + +E+L ++ + I D ++Y+T+ + +A+ L + E
Sbjct: 148 NALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIE 207
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDL 331
+K K D V +N ++ G+ + +W K+ + N + R Y L L
Sbjct: 208 NKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDI-RTYNARLLGLANEAKS 266
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
+E L G+ + SG D N ++ G +G +++AE + +V G P +++++
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 392 ASGHVAKENMEKAFQCFKEALA 413
+ E A + FKE +
Sbjct: 327 LPAMCKAGDFESAIELFKETFS 348
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 155/394 (39%), Gaps = 53/394 (13%)
Query: 57 PVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDR--AVQL 114
P LE L + V + + I ++L+ K AL + W + LP D V
Sbjct: 157 PELETQLDKLQFVPN--MVHITQSLKIVKEVDAALSLFRWAKKQPW--YLPSDECYVVLF 212
Query: 115 ELIGRVRGLESAESYFQNL-----SDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDM 169
+ + + R +S F+ + S D + + ++ A ++ + +K ++
Sbjct: 213 DGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQES 272
Query: 170 GF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
G + YNN+M L+ K ++ M++ D +Y + + S L+
Sbjct: 273 GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAA 332
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
KL ++++ E + + +S++ + KAG D ++ + + ++ A + +I
Sbjct: 333 FKLFQQMK-ERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 289 HYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTY 348
YA GK +RLW D KK SG
Sbjct: 392 SYAKAGKLDTALRLW----DEMKK-------------------------------SGFRP 416
Query: 349 DFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
+F + +++ +++ G +E A T+ + M G PTP+++S + H ++ A + +
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 409 KEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
N G RP S+L+ + + R ++
Sbjct: 477 NS-----MTNAGLRPGLSSYISLLTLLANKRLVD 505
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKD----MGFVSP------------LHYNNIMSLYTRT 187
G L+CYV+ S+D ++S + + D MG ++ + +N +++ Y
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHC 511
Query: 188 EQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMT 247
EQ EK + M + P + L + LE +++ + TE + ++
Sbjct: 512 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER-GQMIHRYITETEHEMNLSL 570
Query: 248 YSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQK 307
+ + + Y K G +K+ ++ D ++DAV +N MIS Y G + + L+ +
Sbjct: 571 SAALIDMYAKCGHLEKS----RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626
Query: 308 DNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI-----LLIGYSR 362
++ K ++ +L G +E+ +KL L + YD K PN+ L+ SR
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLF----LKMHQYDVK-PNLKHYSCLVDLLSR 681
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGW 421
G +E+AE+ + SM +P W + S + E + + A+A +N G+
Sbjct: 682 SGNLEEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 141/338 (41%), Gaps = 26/338 (7%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
L+N YV ++ + +M +S + ++S Y++ + H+K ++L +M D
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVIS---WTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
V P++++Y L S SD+ + + K E D+ V S + + + K G + A
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVR----SALIDVFAKLGEPEDA 213
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGC 324
L D+ DA+ +N +I +A + + L+K K + E T+
Sbjct: 214 LSVF----DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK---RAGFIAEQATLTSV 266
Query: 325 LVKLGDLEEAE-KLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
L L E + + D + N L+ Y + G +E A + M ++
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI- 325
Query: 384 TPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
+WS + SG ++A + F+ ++ G +P + +L + +E+
Sbjct: 326 ---TWSTMISGLAQNGYSQEALKLFER-----MKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 444 VEDFVNSLKKVMSMN--RDMYLSLIKLYVRCGREVDGV 479
+ S+KK+ ++ R+ Y +I L + G+ D V
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 10/295 (3%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS--DK 138
L +K++ QAL+V + + + G L L+G+ A+ F + + +
Sbjct: 98 LIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEP 157
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDV 196
T +++ ALL Y + +D + S + KMK P Y+ ++ Q + V +
Sbjct: 158 TVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSL 217
Query: 197 LAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYV 256
M E ++P+ + I L+ YG + MEK+L + D T + + + +
Sbjct: 218 YKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFG 277
Query: 257 KAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL-- 314
G D + +K + + + +N +I Y GKK+ ++ + + K +
Sbjct: 278 NMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY---GKKRMYDKMSSVMEYMRKLEFPW 334
Query: 315 -NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEK 368
Y ++ +GD + E Q G D K L+ GY+ GL K
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
Query: 187 TEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWM 246
T + ++ D++ + E PD ++Y L DL + + ++++ + D+ D +
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 247 TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ 306
+++ + + + +A+ + K + +K D YN ++ + +L K + + ++K
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 307 KDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLI 366
K+ + Y T++ L K G +EEA L +G D L+ G RKG
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 367 EKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK--EALAVLAENKGW 421
A ++L M +G P +++ + G M+K + ++ ++ V E+ G+
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 12/261 (4%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMM 200
H LLN AG ++K+ +++M++MG SP + YN ++ +K + M
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMG-PSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 201 KEDGVSPDIFSYRICLNSYGARSDL-ENMEKLLEKI--ETEGDIAVDWMTYSTVANFYVK 257
+ G+ P+ + I +++ + + N +KLLE+I ++ + +D + + + + K
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
G +AL K+ K D+V YN +I S G +M+ + D K+ +N +
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG---NMVAAYGFMCDMVKRGVNPD 334
Query: 318 ---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y T++ L K G +EA L G + G D +++ G G + +A L
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 375 SMVDKGKTPTPNSWSIIASGH 395
SM+ P W+++ G+
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGY 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 18/287 (6%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAM 199
V+ ++ +G++ + M M G V+P YN ++S + + ++ D+
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRG-VNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M+ GV+PD SY++ + D+ + L + + + + ++ V + Y + G
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP-EVLLWNVVIDGYGRYG 419
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK------KKDMMRLWKLQKDNCKKQ 313
AL L K + N +I Y G+ K+ MR K+ D
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD----- 474
Query: 314 LNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETML 373
Y +LG LG L A +L + G D L+ G KG ++KAE++L
Sbjct: 475 -TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 374 RSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKG 420
+ G T + I+A + + +A+ +K+ LA N+G
Sbjct: 534 SRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA--TRNRG 578
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 163 MQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGA 221
+++M G +S ++ YN ++ + + E L M++ G+SP++ ++ L+ Y
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 222 RSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV 281
R D++ + +LEK+ G D +T+S + N +A A K+ + + + +
Sbjct: 473 RGDVKKVHGVLEKLLVHG-FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW 341
YN +I S G ++L+ K+N Y + K+ +++AE+LL
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Query: 342 ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
G D + L+ S G +A M S+ G P
Sbjct: 592 LRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 16/302 (5%)
Query: 148 NCYVMA----GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
N Y+ A G +D + + M VS YN +M Y + + + + ++
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVS---YNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
+ P I +Y ++ +LE ++L E++ T+ I D +TY+T+ +VK G
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFVKNGNLSM 462
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK--LQKDNCKKQLNREYITM 321
A + K K D AY LG RL + + D+ L + +
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
G L K+G+L +A + + G D ++ GY G + A + M+ K
Sbjct: 523 DG-LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
P+ ++ ++ GH +E+AFQ E + +G RP +++L + +I
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTE-----MKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 442 EE 443
+E
Sbjct: 637 DE 638
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 10/279 (3%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKED 203
G L+ Y +V+++ M+ G V Y++++++YTR ++K +V+ +MK+D
Sbjct: 249 GMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQD 308
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
V + ++ + LN+Y + +E E +L +E G + + + Y+T+ Y K +
Sbjct: 309 RVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAG-FSPNIIAYNTLITGYGKIFKMEA 367
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
A + + + D +Y MI + ++ ++ K K + T++
Sbjct: 368 AQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLIN 427
Query: 324 CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
K GD + A K + G Y + I+L Y + G I+ +L+
Sbjct: 428 LQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRL 486
Query: 384 TPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWR 422
S+S + +V K M + L +L E K WR
Sbjct: 487 NQTSFSSLVMAYV-KHGM------VDDCLGLLREKK-WR 517
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 161 SQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSY 219
S ++ M+ GF VS YN ++ Y + +Q EK +L MK+ PD ++Y I +N Y
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIY 813
Query: 220 GARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRD 279
G + ++ + +L++++ G + D +Y+T+ Y G+ ++A+ +K+ + D
Sbjct: 814 GEQGWIDEVADVLKELKESG-LGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Query: 280 AVAYNHMIS 288
V Y ++++
Sbjct: 873 KVTYTNLVT 881
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 167 KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE 226
K G V + YN I++ Y + + + + + M+ DG S + +Y L++YG +E
Sbjct: 726 KRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME 785
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHM 286
+L++++ D TY+ + N Y + G D+ LK+ ++ D +YN +
Sbjct: 786 KFRSILKRMKKSTS-GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTL 844
Query: 287 ISHYASLGKKKDMMRLWK 304
I Y G ++ + L K
Sbjct: 845 IKAYGIGGMVEEAVGLVK 862
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 206 SPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKAL 265
S D+ S I +N Y DLE E L E++++ D V W +++ + Y++AG +A
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD-KVSW---TSMIDGYLEAGDVSRAF 420
Query: 266 IYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK---KQLNREYITML 322
+K DK D V + MIS L + + L D + K LN Y +L
Sbjct: 421 GLFQKLHDK----DGVTWTVMIS---GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTY--DFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
+L++ + + + Y D + N L+ Y++ G IE A + MV K
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRD 440
SW+ + G +KA FKE L + G +P S +LS + +
Sbjct: 534 TV----SWNSMIMGLSHHGLADKALNLFKEML-----DSGKKPNSVTFLGVLSACSHSGL 584
Query: 441 IEEVEDFVNSLKKVMSMNR--DMYLSLIKLYVRCGR 474
I + ++K+ S+ D Y+S+I L R G+
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGK 620
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 178 NNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIET 237
N I+ + T Q +KV +L MKE PD+ +Y L+ G + + +L ++
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 238 EGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
+ ++V+ +TY+TV N KA D L+ + + D ++Y +I G K
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
+ +RL+ K + Y ++ CL K GD + A +L
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 138/342 (40%), Gaps = 50/342 (14%)
Query: 138 KTEKVHG--ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHE---- 191
+ E V G +N + G +K+++ + ++ D +++ ++ + R +E
Sbjct: 241 ENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
V+ M+E G D+++ ++ Y +L L+K+ +G + V+ + S +
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG-LKVNCVIVSLI 359
Query: 252 ANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK 311
Y K + +AL K+ D D V YN
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN--------------------------- 392
Query: 312 KQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
L KLG +EEA +LL + + G D L+ GY +G + A
Sbjct: 393 --------VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI 431
++ M+ G +P +++++ SG + E+ + ++ A +G +P + S I
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA-----EGPKPNAVTNSVI 499
Query: 432 LSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+ + R ++E EDF +SL++ N+ S +K Y G
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQKCPENKA---SFVKGYCEAG 538
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 44/274 (16%)
Query: 154 GSVDKSLSQMQKMKDMGFVSP-LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G V+++ +Q+MKD G V ++Y ++ Y + D++ M +G+SPD+ +Y
Sbjct: 402 GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITY 461
Query: 213 RICLNSYGARSDLENMEKLLEKIETEG--------DIAVDWMTYS--------------- 249
+ ++ E + ++ E+++ EG + ++ + ++
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Query: 250 ----TVANF---YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM--- 299
A+F Y +AGL KA + E K + + L K D+
Sbjct: 522 KCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKK 581
Query: 300 MRLWKLQ--KDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
M ++++ + C K M+G KL ++ EA+ L G D I++
Sbjct: 582 MSAYRVEPGRSMCGK--------MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
Y R ++KAE++ M +G P +++++
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
M E G+ PD+F+Y I +++Y ++L+ E L E ++ G I D +TY+ + + Y+K
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG-IKPDVVTYTVLLDRYLKLD 675
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
+ + + + KR A + ++ +++ G D++ L C
Sbjct: 676 PEHHETCSV---QGEVGKRKA---SEVLREFSAAGIGLDVVCYTVLIDRQC--------- 720
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
K+ +LE+A +L + SG D L+ Y RKG I+ A T++ + K
Sbjct: 721 -------KMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Query: 380 GKTPTPNSWSIIASG 394
P+ + + + S
Sbjct: 774 YNIPSESFEAAVKSA 788
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/313 (17%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMG-FVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
+L CY ++L + ++ +DM F+ + YN ++ + E+ ++L MK+ G
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
+ PD+ +Y ++ Y + + + L++++ G ++ D +TY+ + + + G +++
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG-MSPDLITYNVLVSGLARNGHEEEV 477
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW------------KLQKDNCKK 312
L ++ + + K +AV + +I K K+ + K C+
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Query: 313 QLNRE----------------YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
L+++ YI + L G LE+A +L + + +
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 357 LIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLA 416
+ + + + +A+ + +MV++G P +++I+ + ++KA F++
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFED-----M 652
Query: 417 ENKGWRPKSDVVS 429
+ +G +P DVV+
Sbjct: 653 KQRGIKP--DVVT 663
>AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8928009-8928908 REVERSE
LENGTH=299
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 32/287 (11%)
Query: 180 IMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARS--DLENMEKLLEKIET 237
++ LY + E H+ V +L M E + P + L SY S D++ +EK L K E
Sbjct: 1 MLCLYHQAEDHDMVVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVVDVQGVEKFLSKWEV 60
Query: 238 EGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDA---VAYNHMISHYASLG 294
I W T+ Y++AG +K L L++ E + D + Y +++ Y +
Sbjct: 61 M--IQDKWTTFYFPGLVYIRAGFMEKGLALLRRSE--TFVDDGCREIIYGCLMTVYCNEN 116
Query: 295 KKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPN 354
+D+ RLW L KD + ++ K GDL + ++ +W + PN
Sbjct: 117 LTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKGDL---DGVMEEWN--------ECPN 165
Query: 355 ILLI--GYSRKGLIEKAETMLRSMVDKGKT---PTPNSWSIIASGHVAKENMEKAFQCFK 409
+ L+ G + + E+AE ++ M+ K ++ + + + AKE E+ +
Sbjct: 166 LDLMDFGLQHRCVKEEAEKVV-DMLGKKESKWESLAHKVNTLVEDEDAKE--EERRKRVA 222
Query: 410 EALAVLAENKGWRPKSDVVSSILS---WVTDNRDIEEVEDFVNSLKK 453
EA+ ++ W PK+ + S + +V RD+E D + L K
Sbjct: 223 EAMEGRLHDR-WNPKNSMALSAFACVQYVEGRRDMESTADILRLLNK 268
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 121/305 (39%), Gaps = 40/305 (13%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL--------------HYNNIMSLYTRTEQH 190
+L+N + + +++++S + +M +MG + H N +SL+ + E +
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 191 EKVPDV----------------------LAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
PDV L M + + PD+ ++ ++++ +
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
E+L ++ IA + TY+++ N + G D+A E K D VAY +I+
Sbjct: 267 EELYNEM-IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Query: 289 HYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTY 348
+ K D M+++ Y T++ ++G A+++ G
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 349 DFKVPNILLIGYSRKGLIEKAETMLRSMVDK---GKTPTPNSWSIIASGHVAKENMEKAF 405
+ + N+LL G ++KA + M + G P +++++ G +EKA
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 406 QCFKE 410
F++
Sbjct: 446 MVFED 450
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 175/421 (41%), Gaps = 60/421 (14%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQN--LS 134
+VK LR AL + +++ L P V + + ++S + Q L
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 135 DSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKV 193
+E + ++++ Y G ++++ ++K+ G + YN+++ + + +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 194 PDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVAN 253
V MK DG P++F+Y + L + + ++ +KLL ++ +G D ++Y+TV +
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG-CCPDAVSYTTVIS 224
Query: 254 FYVKAGLKDKALIYLKKCEDKAYKRDAV--AYNHMISHYASLGKKKDMMRLWKLQKDNCK 311
+ GL +K+ + A + + V YN +I+ L K+ D ++L ++ +
Sbjct: 225 SMCEVGL-------VKEGRELAERFEPVVSVYNALIN---GLCKEHDYKGAFELMREMVE 274
Query: 312 KQLNR---EYITMLGCLVKLGDLEEAEKLLGQ-------------------WELSGNTYD 349
K ++ Y T++ L G +E A L Q L G T+D
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 350 -----------FKV-PNI-----LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIA 392
F + PN+ L+ G+ G I KA ++ M + G +P ++ +
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 393 SGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLK 452
+G + +++ A + + L G P V ++++ + + +E E + +
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLT-----SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 453 K 453
K
Sbjct: 450 K 450
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 135 DSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIM--SLYTRTEQHEK 192
D D ++K + +L V ++ + + M+++G + N++ +L +
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 193 VPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVA 252
+ M + G PD ++Y ++ ++ +KL ++ E D A +TY+++
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-VEKDCAPTVVTYTSLI 234
Query: 253 NFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ-KDNCK 311
N + D+A+ YL++ + K + + Y+ ++ G+ M L+++ C+
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 312 KQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAET 371
+ Y T++ L K ++EA +LL + L G D + ++ G+ +A
Sbjct: 295 PNM-VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 372 MLRSMVDKGKTPTPNSWSIIASGHVAKEN 400
L M+ G TP +W+I HV N
Sbjct: 354 FLDEMILGGITPNRLTWNI----HVKTSN 378
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 144/329 (43%), Gaps = 39/329 (11%)
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
E+ + A + + G D+++ +NSY + + L ++I D+ ++++
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV-----SWNS 186
Query: 251 VANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNC 310
V YVKAG D AL +K +K +A+++ MIS Y K+ ++L+ +++
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 311 KKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAE 370
+ N L +LG LE+ + + + D + +L+ Y++ G +E+A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS 430
+ +++ K + +W+ + SG+ + +A F E + G +P ++
Sbjct: 303 EVFKNI----KKKSVQAWTALISGYAYHGHGREAISKFME-----MQKMGIKPNVITFTA 353
Query: 431 ILSWVTDNRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYVRCG--REVDGVLESM--- 483
+L+ + +EE + S+++ ++ + Y ++ L R G E ++ M
Sbjct: 354 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Query: 484 ----------KA----DNIELDEEMEEIL 498
KA NIEL EE+ EIL
Sbjct: 414 PNAVIWGALLKACRIHKNIELGEEIGEIL 442
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 13/257 (5%)
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
MK+ G P +F Y +++ + + E + +G + + T+ + KAG
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDG-LVEESTTFMILVKGLCKAG 277
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREY 318
++ L L++ + K D AY MI S G +R+W ++++D K + Y
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV-MAY 336
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
T++ L K G +E +L + + D ++ +L+ G+ G + A + +VD
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSIL-SWVTD 437
G ++ + G + ++KA++ F+ A+ + P + +S I+ ++V
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAI-----EEELEPDFETLSPIMVAYVVM 451
Query: 438 NRDIEEVEDFVNSLKKV 454
NR + DF N L+++
Sbjct: 452 NR----LSDFSNVLERI 464
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 137 DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHYNNIMSLYTRTEQHEKVPD 195
++ EK+H + +V ++ +++KM + + +N+I+S Y EQ E
Sbjct: 534 EEAEKIHSR----FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
+ M E G++PD F+Y L++ + + K + + ++ D ST+ + Y
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLAS-AGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 256 VKAG-LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQ 313
K G L D L++ +K+ +RD V +N MI YA GK ++ ++L+ ++ +N K
Sbjct: 649 SKCGDLHDSRLMF-----EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 314 LNREYITMLGCLVKLGDLEEA 334
+ +I++L +G +++
Sbjct: 704 -HVTFISILRACAHMGLIDKG 723
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 7/261 (2%)
Query: 154 GSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYR 213
G + L+ M M + + SP +N+++ Y + H +L M + G P Y
Sbjct: 354 GRCKRVLNMM--MMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 214 ICLNSYGARSDLENME--KLLEKIETE---GDIAVDWMTYSTVANFYVKAGLKDKALIYL 268
I + S D N + L EK +E + ++ + S+ AG +KA +
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 269 KKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKL 328
++ + + D Y+ ++++ + K + L++ K Y M+ K
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 329 GDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSW 388
G +E+A K + G T + L+ Y + + A + +M+ +G P ++
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 389 SIIASGHVAKENMEKAFQCFK 409
S + GH +EKA Q F+
Sbjct: 592 SALIDGHCKAGQVEKACQIFE 612
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 24/290 (8%)
Query: 123 LESAESYFQNLSDSDKTEKV--HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL-HYNN 179
+E A +F + + T V + AL++ Y+ A V + + M G + + Y+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 180 IMSLYTRTEQHEK-------------VPDVLAMMKE---DGVSPDIFSYRICLNSYGARS 223
++ + + Q EK VPDV K+ + P++ +Y L+ +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 224 DLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAY 283
+E KLL+ + EG + + Y + + K G D+A + + + Y
Sbjct: 654 RVEEARKLLDAMSMEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 284 NHMISHYASLGKKKDMMR--LWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW 341
+ +I Y + K++D+ L K+ +++C + Y M+ L K+G +EA KL+
Sbjct: 713 SSLIDRYFKV-KRQDLASKVLSKMLENSCAPNVVI-YTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 342 ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
E G + ++ G+ G IE +L M KG P ++ ++
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 30/315 (9%)
Query: 103 CPILPGDRAVQLELIGRVRG---------LESAE-SYFQNLSDSDKTEKVH-GALLNCYV 151
C +PG + LIG + G L+ AE +Y + L+ K++ + C
Sbjct: 401 CGHMPGYVVYNI-LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 152 MAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIF 210
AG +K+ S +++M GF+ Y+ +++ + E + MK G+ D++
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 211 SYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKK 270
+Y I ++S+ +E K ++ G + +TY+ + + Y+KA A +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 271 CEDKAYKRDAVAYNHMISHYASLGKKK----------------DMMRLWKLQKDNCKKQL 314
+ + V Y+ +I + G+ + D+ +K DN ++
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLR 374
Y +L K +EEA KLL + G + V + L+ G + G +++A+ +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 375 SMVDKGKTPTPNSWS 389
M + G T ++S
Sbjct: 699 EMSEHGFPATLYTYS 713
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVP--DVLAMMKE 202
+L+N + ++ S+ ++ +M+ MG + + I+ + T + VP +VL MK+
Sbjct: 18 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL-IDTLCKNRLVVPALEVLKRMKD 76
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G+SP++ +Y + L + E+ L +++++ I + +T+S + + Y K G
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFSALIDAYAKRGKLS 135
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ-KDNCKKQLNREYITM 321
K K + + Y+ +I + + +++ L C + Y T+
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV-VTYSTL 194
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
K +++ KLL G + N L+ GY + G I+ A + M G
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKE 410
P S++I+ +G A +EKA F+
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEH 283
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 4/276 (1%)
Query: 140 EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLA 198
E + L+ Y AGSVDK++ K+ V + N ++++ + EK
Sbjct: 116 ESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
K+ + P+ S+ I + + + D E K+ +++ E ++ +TY+++ F +
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM-LEMEVQPSVVTYNSLIGFLCRN 234
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL-WKLQKDNCKKQLNRE 317
KA L+ K + +AV + ++ G+ + +L + ++ CK L
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL-VN 293
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y ++ L K G ++EA+ LLG+ + D + NIL+ + + +A +L M
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALA 413
KG P ++ ++ G E+ + LA
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
V PD +Y + + +D+ E + + G ++ ++ +++ + Y G D A
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQ-NSLLHLYANCG--DVA 173
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGC 324
Y K DK ++D VA+N +I+ +A GK ++ + L+ K +++L
Sbjct: 174 SAY--KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 325 LVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPT 384
K+G L +++ G T + N+LL Y+R G +E+A+T+ MVDK
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV-- 289
Query: 385 PNSWSIIASGHVAKENMEKAFQCFK 409
SW+ + G ++A + FK
Sbjct: 290 --SWTSLIVGLAVNGFGKEAIELFK 312
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 10/259 (3%)
Query: 157 DKSLSQMQKMKDMGFVSPL--HYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI 214
D +S ++M+ +G + PL N +M + Q + L M + G PD+ ++
Sbjct: 100 DVVISLFEQMQILG-IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 215 CLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDK 274
LN Y + +E+ L ++I G + +TY+T+ K + A+ +
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 275 AYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT---MLGCLVKLGDL 331
+ + V YN +++ +G+ D W L +D K+++ IT ++ VK+G L
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAA--W-LLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 332 EEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSII 391
EA++L D L+ G GL+++A M M G P ++ +
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 392 ASGHVAKENMEKAFQCFKE 410
G + +E + F E
Sbjct: 335 IHGFCKSKRVEDGMKIFYE 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
+M+ +G P+ Y ++ + +E+ K+ ++ +G +A + +TY+ + Y
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQGYCLV 376
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREY 318
G D A + + D YN ++ GK + + +++ + K++++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR---KREMDINI 433
Query: 319 IT---MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
+T ++ + KLG +E+A L G + ++ G+ R+GLI +A+++ +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 376 MVDKGKTPTPNSW 388
M + G P + +
Sbjct: 494 MKEDGFLPNESVY 506
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 131/308 (42%), Gaps = 20/308 (6%)
Query: 109 DRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKD 168
D+AV+L L G FQ+L+ + +L+ + V+K+ + ++
Sbjct: 143 DKAVKLFLNMHEHGC------FQDLASFN-------TILDVLCKSKRVEKAYELFRALRG 189
Query: 169 MGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENM 228
V + YN I++ + ++ K +VL M E G++P++ +Y L + + +
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 229 EKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMIS 288
+ +++ D +D +TY+TV + + AG +A + + YN MI
Sbjct: 250 WEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 289 HYASLGKKKDMMRLWKLQKDNCKKQLN---REYITMLGCLVKLGDLEEAEKLLGQWELSG 345
L KK ++ + ++ ++ Y ++ L G+ E+L+ + E G
Sbjct: 309 ---VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAF 405
+F+ N+++ YS +EKA + M P ++++I+ SG ++ E
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Query: 406 QCFKEALA 413
+A A
Sbjct: 426 VAGNQAFA 433
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 153/345 (44%), Gaps = 32/345 (9%)
Query: 138 KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVL 197
+ ++ LL+ Y G +D + + ++M D VS Y ++++ Y R + +
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS---YTSMIAGYAREGLAGEAVKLF 385
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M+E+G+SPD+++ LN L+ +++ E I+ E D+ D + + + Y K
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAK 444
Query: 258 AG-LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN- 315
G +++ L++ + +D +++N +I Y+ + + L+ L + +K+ +
Sbjct: 445 CGSMQEAELVF-----SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE--EKRFSP 497
Query: 316 --REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETML 373
R +L L ++ ++ G +G D V N L+ Y++ G + A +
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 374 RSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF-KEALAVLAENKGWRPKSDVVS--S 430
+ K SW+++ +G+ F KEA+A+ + + ++D +S S
Sbjct: 558 DDIASKDLV----SWTVMIAGY--------GMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 431 ILSWVTDNRDIEEVEDFVNSLKKVMSM--NRDMYLSLIKLYVRCG 473
+L + + ++E F N ++ + + Y ++ + R G
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTG 650
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
+HG Y G++ +L Q ++M + G + Y+ ++ ++ E+ +L M
Sbjct: 249 IHG-----YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
++GV P++ +Y + LE L +I + G I VD Y T+ + + G
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG-IEVDEFLYVTLIDGICRKGN 362
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE--- 317
++A L E + + + YN +I+ G+ + D K + +
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS--------EADEVSKGVVGDVIT 414
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMV 377
Y T+L +K+ +++ ++ ++ + D + NILL + G +A+ + R+M
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP 474
Query: 378 DKGKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
+ TP +++ + G+ +E+A + F E
Sbjct: 475 EMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 137/317 (43%), Gaps = 18/317 (5%)
Query: 170 GFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVS-P-DIFSYRICLNSYGARSDLEN 227
F S L + +++ + + + +VL MM V+ P D F ++ + E
Sbjct: 130 AFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPEL 189
Query: 228 MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI 287
E G + + +TY+T+ + + G D+ +++ ED+ ++ D V Y++ I
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELS 344
Y G D + ++ +K +NR+ Y ++ L K G++EEA LLG+
Sbjct: 250 HGYFKGGALVDALM---QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 345 GNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA 404
G + ++ G + G +E+A + ++ G + + G K N+ +A
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 405 FQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYLS 464
F + E +G +P +++++ + + E ++ + K + + Y +
Sbjct: 367 FSMLGD-----MEQRGIQPSILTYNTVINGLCMAGRVSEADE----VSKGVVGDVITYST 417
Query: 465 LIKLYVRCGREVDGVLE 481
L+ Y++ + +D VLE
Sbjct: 418 LLDSYIKV-QNIDAVLE 433
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
K ++ + K GV+ + +Y +N + L +L + +E G + + +TY +
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE-VTYGIL 731
Query: 252 ANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCK 311
+ K GL A L K + + YN ++ Y LG+ +D MR+ +
Sbjct: 732 IDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS------R 785
Query: 312 KQLNR------EYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGL 365
K + R +M+ K GD+EEA + +++ + DF L+ G+ KG
Sbjct: 786 KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGR 845
Query: 366 IEKAETMLRSMV 377
+E+A +LR M+
Sbjct: 846 MEEARGLLREML 857
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 148/358 (41%), Gaps = 16/358 (4%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
G+LLN + +++S + M GFV + + YN +++ + +V M++
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
G+ D +Y ++ + +LL + + I + + ++ + + +VK G
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQ-KDNCKKQLNREYITM 321
+A K+ ++ + YN +I+ + G D ++ L C + Y T+
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV-VTYNTL 330
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
+ K +E+ KL + G D N L+ GY + G + A+ + MVD G
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSS--ILSWVTDNR 439
+P +++I+ +EK AL ++ + + D+++ I+ +
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEK-------ALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 440 DIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYVRCG--REVDGVLESMKADNIELDEEM 494
++E SL +K + + Y+++I R G RE D + MK D E +
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 26/276 (9%)
Query: 133 LSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFV-SPLHYNNIMSLYTRTEQHE 191
L DSD V +NC V A VD +++ + + G + P+ YNNI+ + + E
Sbjct: 436 LPDSDSLSIV----INCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 192 KVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV 251
+ +L MK+ GV P F+ R D LL+K+ G W+ ++T
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG--FEPWIKHTT- 548
Query: 252 ANFYVKA----GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYAS---LGKKKDMMRLWK 304
F VK G A YL + + HM++ A+ L K + + R +
Sbjct: 549 --FLVKKLCENGRAVDACKYLDDVAGEGF------LGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 305 LQKDNCKKQLNRE---YITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYS 361
L +D C + Y ++ L K EA+ L + G N ++ G+
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 362 RKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
++G I++ + + M + K P +++ + G A
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 145/338 (42%), Gaps = 37/338 (10%)
Query: 163 MQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGAR 222
+Q +M +N ++ +T + + + M GV D F+Y + S
Sbjct: 84 LQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGI 143
Query: 223 SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVA 282
S LE +K+ + G ++ D +++ + Y+K G A +K ++ +RD V+
Sbjct: 144 SSLEEGKKIHAMVIKLGFVS-DVYVCNSLISLYMKLGCAWDA----EKVFEEMPERDIVS 198
Query: 283 YNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR-EYITMLGCLV-----KLGDLEEAEK 336
+N MIS Y +LG + L+K + C + +R ++ LG K+G
Sbjct: 199 WNSMISGYLALGDGFSSLMLFK-EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 337 LLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHV 396
+ + E T D V +L YS+ G + AE + M+ + +W+++ +
Sbjct: 258 VRSRIE----TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIV----AWNVMIGCYA 309
Query: 397 AKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSI----LSWVTDNRDIEEVEDFVNSLK 452
+ AF CF++ ++E G +P DV++SI S + + R I +++
Sbjct: 310 RNGRVTDAFLCFQK----MSEQNGLQP--DVITSINLLPASAILEGRTIHGY-----AMR 358
Query: 453 KVMSMNRDMYLSLIKLYVRCG--REVDGVLESMKADNI 488
+ + + +LI +Y CG + + + + M N+
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREY 318
LK + + +K D+ KRD V++ MIS ++ G D + L+K + +++ K Y
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN-QFTY 116
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
++L LG L+E ++ G E + V + LL Y+R G +E+A SM +
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDN 438
+ SW+ + G+ A + +F F+ L +G +P S+L
Sbjct: 177 RDLV----SWNAMIDGYTANACADTSFSLFQ-----LMLTEGKKPDCFTFGSLLRASIVV 227
Query: 439 RDIEEVEDFVNSLKKVMSMNRDMYL--SLIKLYVRCG 473
+ +E V + ++ L + R L SL+ YV+CG
Sbjct: 228 KCLEIVSE-LHGLAIKLGFGRSSALIRSLVNAYVKCG 263
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 249 STVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKD 308
S++A+ Y K G+ D A K D+ R+AVA+N ++ Y GK ++ +RL+ D
Sbjct: 212 SSLADMYGKCGVLDDA----SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS---D 264
Query: 309 NCKKQLNREYITMLGCL---VKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGL 365
K+ + +T+ CL +G +EE ++ ++G D + LL Y + GL
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 366 IEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKA-FQC 407
IE AE + M +K +W++I SG+V + +E A + C
Sbjct: 325 IEYAEMVFDRMFEKDVV----TWNLIISGYVQQGLVEDAIYMC 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 58/330 (17%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V +L + Y G +D + ++ D V+ +N +M Y + ++E+ + + M+
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVA---WNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ GV P + CL++ +E K I + +D + +++ NFY K GL
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEE-GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKD------MMRLWKLQKD------- 308
+ Y + D+ +++D V +N +IS Y G +D +MRL KL+ D
Sbjct: 326 E----YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 309 --------NCK--KQLNREYI------------TMLGCLVKLGDLEEAEKLLGQWELSGN 346
N K K++ I T++ K G + +A+K+ S
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD----STV 437
Query: 347 TYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQ 406
D + N LL Y+ GL +A + M +G P +W++I + +++A
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 407 CFKEALAVLAENKGWRPKSDVVSSILSWVT 436
F + S ++ +++SW T
Sbjct: 498 MFLQ-----------MQSSGIIPNLISWTT 516
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDG 204
+LLN Y G ++ + +M + V+ +N I+S Y + E + +M+ +
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVT---WNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 205 VSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKA 264
+ D + L S AR++ + K ++ D + STV + Y K G +
Sbjct: 371 LKYDCVTLAT-LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG----S 425
Query: 265 LIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL-WKLQKDNCKKQLNREYITMLG 323
++ KK D ++D + +N +++ YA G + +RL + +Q + + + +L
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS 485
Query: 324 CLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
L++ G ++EA+ + Q + SG + ++ G + G E+A LR M + G
Sbjct: 486 -LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL-- 542
Query: 384 TPNSWSII----ASGHVAKENMEKAFQCF 408
PN++SI A H+A ++ + +
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGY 571
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 137/342 (40%), Gaps = 55/342 (16%)
Query: 174 PLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLE 233
PL +N +++ Y + E E+V M G+ PD F+Y L + G D+ +
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 234 KIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASL 293
IE + + V N + + + + ++ D+ ++RDAV++N +I+ YAS
Sbjct: 169 SIEVS-----SYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 294 GKKKDMMRL---------------WKLQKDNCKKQLNREYITMLGCLVKLGDLE------ 332
G + L W + C + N Y+ LG + ++ +
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN--YVGALGLISRMRNFPTSLDPV 281
Query: 333 ------EAEKLLGQWELS--------GNTYDF--KVPNILLIGYSRKGLIEKAETMLRSM 376
+A L+G L ++YD V N L+ YS+ + A + R
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVT 436
+ +W+ I SG+ E+A +E L G++P S ++SIL
Sbjct: 342 EENSLC----TWNSIISGYAQLNKSEEASHLLREMLVA-----GFQPNSITLASILPLCA 392
Query: 437 DNRDIEEVEDFVNSL--KKVMSMNRDMYLSLIKLYVRCGREV 476
+++ ++F + +K ++ SL+ +Y + G+ V
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 150/343 (43%), Gaps = 19/343 (5%)
Query: 155 SVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
+V+ +L+ +M + G + P + YN+++ + +L+ M E ++P++ ++
Sbjct: 270 NVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
++++ L EKL +++ + I D TYS++ N + D+A +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE 332
K + V YN +I + + ++ M L++ Y T++ L + GD +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 333 EAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIA 392
A+K+ + G D +ILL G + G +EKA + + P +++I+
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 393 SGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLK 452
G +E + F +L++ KG +P + ++++S EE + +K
Sbjct: 508 EGMCKAGKVEDGWDLFC-SLSL----KGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 453 KVMSM-NRDMYLSLIKLYVRCGREVDGVLESMKADNIELDEEM 494
+ ++ N Y +LI+ +R G KA + EL +EM
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGD---------KAASAELIKEM 596
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 14/274 (5%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
+ L+NC+ + +L+ + KM +G+ + + SL +++ + +A++ +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIV--TLSSLLNGYCHGKRISEAVALVDQ 175
Query: 203 DGV---SPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
V P+ ++ ++ + L++++ G D TY TV N K G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRG 234
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN-REY 318
D AL LKK E + D V Y +I + D + L+ + DN + N Y
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT-EMDNKGIRPNVVTY 293
Query: 319 ITMLGCLVKLGDLEEAEKLLG---QWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
+++ CL G +A +LL + +++ N F L+ + ++G + +AE +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA---LIDAFVKEGKLVEAEKLYDE 350
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
M+ + P ++S + +G + +++A F+
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 48/294 (16%)
Query: 199 MMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKA 258
M+K GV P + Y + + +L KL ++ EG I VD YST+ + +KA
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE-AYEGKIKVDAAIYSTLISSLIKA 271
Query: 259 GLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREY 318
G ++ + L++ +K K D V YN +I+ + C +
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGF-------------------CVEN----- 307
Query: 319 ITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVD 378
D E A ++L + G D N++L + R E+A + M
Sbjct: 308 -----------DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR 356
Query: 379 KGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN--KGWRPKSDVVSSILSWVT 436
+G +P S+ I+ G E ++ F+EA +L E KG++P+ D + L +
Sbjct: 357 RGCSPDTLSYRIVFDGLC--EGLQ-----FEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Query: 437 DNRDIEEVEDFVNSLKKVMSMNRDMYLSLIKLYVR---CGREVDGVLESMKADN 487
++ +E + ++SL + ++ + D++ +I + +D +L ++K D
Sbjct: 410 ESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKEDG 463
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/439 (18%), Positives = 163/439 (37%), Gaps = 71/439 (16%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS 136
+++TLR K L+ +W+S+KG + LE +GR R L A ++
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSHK-EQSFFLMLEFLGRARNLNVARNFL------ 123
Query: 137 DKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDV 196
S+++ + K++D ++N+++ Y ++ +
Sbjct: 124 -----------------FSIERRSNGCVKLQDR------YFNSLIRSYGNAGLFQESVKL 160
Query: 197 LAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYV 256
MK+ G+SP + ++ L+ R L +++ + D T++T+ N +
Sbjct: 161 FQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFC 220
Query: 257 KAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK------------------D 298
K + D+A K E D V YN +I GK K +
Sbjct: 221 KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPN 280
Query: 299 MMRLWKLQKDNCKKQ------------LNR-------EYITMLGCLVKLGDLEEAEKLL- 338
++ L + C KQ L+R Y T++ L + +E + +L
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILI 340
Query: 339 -GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVA 397
G + D NIL+ + G ++ A + + M++ P S+S++
Sbjct: 341 GGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCM 400
Query: 398 KENMEKAFQCFKEAL--AVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVM 455
+ ++A F E VL +P + + + ++ N ++ E L K
Sbjct: 401 RNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 460
Query: 456 SMNRDMYLSLIKLYVRCGR 474
+ Y +LI + R G+
Sbjct: 461 VQDPPSYKTLITGHCREGK 479
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 112/283 (39%), Gaps = 39/283 (13%)
Query: 140 EKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAM 199
E V G LL+ GSV ++ + M++ + ++ +++ + R + + +VL
Sbjct: 202 EYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 200 MKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-------------------- 239
MKE G+ PDI + L+ Y + + L+ + G
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 240 ---------------DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYN 284
D +TY+ + + + K G+ DK L K V Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 285 H-MISHYASLGKKKDMMRLWKLQKDNCKKQ-LNREYITMLGCLVKLGDLEEAEKLLGQWE 342
M++H ++ + + K+++ C L + L C KLG+++EA +L + E
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC--KLGEVKEAVRLWNEME 439
Query: 343 LSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTP 385
+G + I++ G++ +G + +A + MV +G P
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAP 482
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 155/420 (36%), Gaps = 81/420 (19%)
Query: 59 LENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIG 118
LE+ + GH +++ L R +A++V E M S G+ P
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPD------------- 140
Query: 119 RVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVS-PLHY 177
SA +Y L+N G+V ++ ++KM+D G+ S + Y
Sbjct: 141 -----ASAYTY----------------LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179
Query: 178 NNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIET 237
N ++ + + + + G++P+ F+Y L + + KLL++I
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 238 EGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKK 297
+G + ++Y+ + + K G D A+ ++ K +K + V+YN
Sbjct: 240 KGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN------------- 285
Query: 298 DMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILL 357
+L CL G EEA LL + + NIL+
Sbjct: 286 ----------------------ILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 358 IGYSRKGLIEKAETMLRSMVDKGKTP---TPNSWSIIASGHVAKENMEKAFQCFKEALAV 414
+ G E+A +L+ M KG T S++ + + + ++ +C E +
Sbjct: 324 NSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY- 381
Query: 415 LAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL-KKVMSMNRDMYLSLIKLYVRCG 473
+ +P ++I S N ++E + SL K D Y S+I R G
Sbjct: 382 ----RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKG 437
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
++ E + I Y ++ + + +E++E++L+K+ G I D +T + + + Y K
Sbjct: 373 GVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNG-IFPDILTATALVHMYSK 431
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNRE 317
+G ++A + + + D Y MI Y + GK K RL K + K
Sbjct: 432 SGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEV 491
Query: 318 YITMLGCLVKLGDLEEAEKLLGQWEL-SGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM 376
Y+ +L ++GD A + + S F+ ++ + Y + G ++KA++ M
Sbjct: 492 YMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEM 551
Query: 377 VDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVT 436
G P + + + + +++KA + L + E G + ++ W+
Sbjct: 552 RKLGHKPDDKCIANLVRAYKGENSLDKALR-----LLLQLEKDGIEIGVITYTVLVDWMA 606
Query: 437 DNRDIEEVEDFV 448
+ IEE E +
Sbjct: 607 NLGLIEEAEQLL 618
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 147/357 (41%), Gaps = 50/357 (14%)
Query: 148 NCYVMAGSVDKS--LSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGV 205
NC ++ G V K + Q M + +N I++ Y Q K+ + + E V
Sbjct: 223 NC-LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYA---QSGKIDEARQLFDESPV 278
Query: 206 SPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWM------------------- 246
D+F++ ++ Y +E +L +K+ +++ + M
Sbjct: 279 Q-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 247 -------TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDM 299
T++T+ Y + G +A K DK KRD V++ MI+ Y+ G +
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEA----KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 300 MRLWKLQKDNCKKQLNR-EYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLI 358
+RL+ +Q + +LNR + + L + LE ++L G+ G V N LL+
Sbjct: 394 LRLF-VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 359 GYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAEN 418
Y + G IE+A + + M K SW+ + +G+ E A + F+ +
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIV----SWNTMIAGYSRHGFGEVALRFFES-----MKR 503
Query: 419 KGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVMSM--NRDMYLSLIKLYVRCG 473
+G +P + ++LS + +++ + ++ + + N Y ++ L R G
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 22/263 (8%)
Query: 125 SAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSP--LHYNNIMS 182
+A F +L + D V A+++ Y D++L+ ++ MK +G + P + +N ++S
Sbjct: 170 NARKVFSDLGEQDLV--VFNAMISGYANNSQADEALNLVKDMKLLG-IKPDVITWNALIS 226
Query: 183 LYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG--- 239
++ EKV ++L +M DG PD+ S+ ++ E +++ T G
Sbjct: 227 GFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 240 ---DIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKK 296
I +T+A Y+K G + + ED + R A ++ Y G
Sbjct: 287 NSATIITLLPACTTLA--YMKHGKEIHGYSVVTGLEDHGFVRSA-----LLDMYGKCGFI 339
Query: 297 KDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNIL 356
+ M L++ K+ + +M+ C G ++A +L Q E +G D +
Sbjct: 340 SEAMILFR----KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAI 395
Query: 357 LIGYSRKGLIEKAETMLRSMVDK 379
L S GL + + + M +K
Sbjct: 396 LTACSHAGLTDLGQNLFLLMQNK 418
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 23/274 (8%)
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G D++ + ++ Y LE+ K+ +K D ++Y+ + Y G +
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR-----DVVSYTALIKGYASRGYIEN 218
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYITML 322
A +K D+ +D V++N MIS YA G K+ + L+K + K N + +T++
Sbjct: 219 A----QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD-ESTMVTVV 273
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKT 382
+ G +E ++ + G + K+ N L+ YS+ G +E A + + K
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 383 PTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
SW+ + G+ ++A F+E L G P + SIL I+
Sbjct: 334 ----SWNTLIGGYTHMNLYKEALLLFQEML-----RSGETPNDVTMLSILPACAHLGAID 384
Query: 443 E---VEDFVNSLKKVMSMNRDMYLSLIKLYVRCG 473
+ +++ K ++ + SLI +Y +CG
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 144/338 (42%), Gaps = 21/338 (6%)
Query: 58 VLENWLQEGHAVRDQELQRI-VKTLRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLEL 116
VL N L+ R+ L + +K R K ++ ++ + M +G+ P D A +
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKP----DNATFTTI 216
Query: 117 I--GRVRGL-ESAESYFQNLSD--SDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF 171
I R G+ + A +F+ +S + A+++ Y AG+VD +LS + + +
Sbjct: 217 ISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKW 276
Query: 172 -VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
+ + ++ ++ +Y + ++ ++ MK GV P++ Y ++S G R+ K
Sbjct: 277 RIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG-RAKRPWQAK 335
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHY 290
++ K +W TY+ + Y +A D AL ++ ++K + YN ++S
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 395
Query: 291 ASLGKKKDMMRLWKLQKDNCKKQLNREY-----ITMLGCLVKLGDLEEAEKLLGQWELSG 345
A + +++ K NC+ + IT+ C G + EAE L Q +G
Sbjct: 396 ADNRYVDEAFEIFQDMK-NCETCDPDSWTFSSLITVYAC---SGRVSEAEAALLQMREAG 451
Query: 346 NTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTP 383
V ++ Y + ++ +++ G TP
Sbjct: 452 FEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 154 GSVDKSLSQMQKMKDMGFVSP--LHYNNIMSLYTRTEQHEKVPDVLAMMKED-GVSPDIF 210
G D S+ + +KM +G + P +N++M + R + E V + M+E+ G SP+++
Sbjct: 225 GLDDVSVDEAKKM--IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 211 SYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTV-----ANFYV---KAGLKD 262
SY + + +Y AR + EK+ E+++ G + D + Y+T+ +NF V K +D
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRG-VVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
L K + + Y H+++ Y G + +++ K +K + +T+
Sbjct: 342 MGL--------KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK---RKGFEADGLTIE 390
Query: 323 GCLVKLGDLEEAEKLLGQWEL------------SGNTYDFKVPNILLIGYSRKGLIEKAE 370
+ L D + ++++ ++ S N Y+ V + G +++A
Sbjct: 391 ALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL-----CEDGKMDRAL 445
Query: 371 TMLRSMVDKGKTPTPNSWSIIASGH 395
+ MV KG P+ ++ G+
Sbjct: 446 NIQAEMVGKGFKPSQETYRAFIDGY 470
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 136/320 (42%), Gaps = 23/320 (7%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V AL+ Y G ++ + +M + V+ +N+++S + + ++ V M+
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVA---WNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-DIAVDWMTYSTVANFYVKAGL 260
E G PD ++ L++ + + + I +EG D+ V T + N Y + G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT--ALINLYSRCGD 258
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR-EYI 319
KA ++ DK + + A+ MIS Y + G + + L+ +D+C N ++
Sbjct: 259 VGKA----REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 320 TMLGCLVKLGDLEEA----EKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
+L G +EE +++ + L + V + ++G R G +++A +
Sbjct: 315 AVLSACAHAGLVEEGRSVYKRMTKSYRLIPGV-EHHVCMVDMLG--RAGFLDEAYKFIHQ 371
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
+ GK P W+ + N + + K +A+ +N G ++S+I +
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV---MLSNIYALS 428
Query: 436 TDNRDIEEVEDFV--NSLKK 453
++ + D + N+L+K
Sbjct: 429 GKTDEVSHIRDGMMRNNLRK 448
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 151/352 (42%), Gaps = 23/352 (6%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V AL++ Y G++ +S +M + YN +++ ++ EK ++ M
Sbjct: 325 VCNALVSLYFHLGNL---ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
DG+ PD + + + A L ++L T+ A + + N Y K
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
+ AL Y + E + V +N M+ Y L ++ R+++ + Y ++
Sbjct: 441 ETALDYFLETE----VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
L ++LGDLE E++ Q + + V ++L+ Y++ G ++ A +L K
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
SW+ + +G+ +KA F++ L ++G R +++ +S + +
Sbjct: 557 V----SWTTMIAGYTQYNFDDKALTTFRQML-----DRGIRSDEVGLTNAVSACAGLQAL 607
Query: 442 EEVEDFVNSLKKVMSMNRDMYL--SLIKLYVRCGREVDGVL---ESMKADNI 488
+E + +++ V + D+ +L+ LY RCG+ + L ++ DNI
Sbjct: 608 KEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 12/268 (4%)
Query: 141 KVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMM 200
K+ GALLN Y ++ +L + + V +N ++ Y + + M
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVL---WNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
+ + + P+ ++Y L + DLE E++ +I + + ++ S + + Y K G
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYIT 320
D A L + K D V++ MI+ Y + ++ D +
Sbjct: 541 LDTAWDILIRFAGK----DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 321 MLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKG 380
+ L L+E +++ Q +SG + D N L+ YSR G IE++ ++
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF----EQT 652
Query: 381 KTPTPNSWSIIASGHVAKENMEKAFQCF 408
+ +W+ + SG N E+A + F
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVF 680
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 148/347 (42%), Gaps = 57/347 (16%)
Query: 196 VLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFY 255
V +MK G+S + + I +NS +LE E LL G + D +TY+T+ Y
Sbjct: 2 VRGLMKFPGISTKLLN--ISVNSLCKFRNLERAETLLIDGIRLG-VLPDVITYNTLIKGY 58
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMM--RLWKLQKDNCKKQ 313
+ D+A ++ + + D YN +IS G K++M R+ +L +
Sbjct: 59 TRFIGIDEAYAVTRRMREAGIEPDVTTYNSLIS-----GAAKNLMLNRVLQLFDEMLHSG 113
Query: 314 LNRE---YITMLGCLVKLGDLEEAEKLLGQ-WELSG-----NTYD--------------- 349
L+ + Y T++ C KLG EA K+L + L+G +TY+
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173
Query: 350 ---FK-----------VPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGH 395
FK NIL+ G + + + M+R + G TP +++ + +
Sbjct: 174 IELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 233
Query: 396 VAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKVM 455
+ +EK Q F + + +G+ +++S + EE + ++ L +
Sbjct: 234 FKTKRIEKGLQLFLK-----MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Query: 456 SMNRDM--YLSLIKLYVRCGR--EVDGVLESMKADNIELDEEMEEIL 498
+ ++D+ Y +L+ LY + G VD +LE ++ ++ D+ I+
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPL--HYNNIMSLYTRTEQHEKVPDVLAMM 200
+ L++CY G ++ + + + + P YN ++ ++ + ++ +
Sbjct: 121 YNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Query: 201 KEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGL 260
K V P++ +Y I +N + +++ ++ +++ G + +TY+T+ Y K
Sbjct: 181 KSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG-YTPNAVTYTTMLKMYFKTKR 238
Query: 261 KDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR-LWKLQKDNCKKQLNREYI 319
+K L K + + Y D A ++S G+ ++ + +L + + Q Y
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T+L K G+L+ + LL + E+ G D I++ G G AE L + +
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEM 358
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCF 408
G P+ + + + G ++++A + F
Sbjct: 359 GMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIE 236
YN ++ YTR ++ V M+E G+ PD+ +Y ++ L + +L +++
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 237 TEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV-AYNHMISHYASLGK 295
G ++ D +Y+T+ + Y K G +A L + A + YN ++ G
Sbjct: 111 HSG-LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 296 KKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNI 355
+ + L+K K K +L Y ++ L K + + ++ + + SG T +
Sbjct: 170 TDNAIELFKHLKSRVKPEL-MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 415
+L Y + IEK + M +G T + + S + E+A++C E +
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV--- 285
Query: 416 AENKGWRPKSDVVS--SILSWVTDNRDIEEVEDFVNSLK 452
G R + D+VS ++L+ + +++ V+D + ++
Sbjct: 286 --RSGTRSQ-DIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 111/271 (40%), Gaps = 8/271 (2%)
Query: 144 GALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
G+LL+ + + + + S + M G+ + + YN ++ + + ++L M++
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 203 DGVSPDIFSYRICLNS--YGAR-SDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAG 259
G+ D+ +Y L Y R SD M + + K D+ +T++ + + +VK G
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV----VTFTALIDVFVKQG 260
Query: 260 LKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYI 319
D+A K+ + + V YN +I+ G+ D + + L Y
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 320 TMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
T++ K ++E KL + G D N L+ GY + G + A + MV +
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKE 410
TP + I+ G +E A F +
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 107/260 (41%), Gaps = 14/260 (5%)
Query: 153 AGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
G+ ++ S ++ GF+ + + + +L+ + +P ++ + + ++ Y
Sbjct: 28 GGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY 87
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
E + +K+E G I+ D +++ + + + + AL L K
Sbjct: 88 -------------ETVIYFSQKMELYG-ISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE 332
Y+ V + ++ + + + D L L + + Y T++ L K G+L
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 333 EAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIA 392
A +LL + E G D N LL G G A MLR M+ + P +++ +
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 393 SGHVAKENMEKAFQCFKEAL 412
V + N+++A + +KE +
Sbjct: 254 DVFVKQGNLDEAQELYKEMI 273
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 47/375 (12%)
Query: 110 RAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDM 169
+A +L+L R+RG S D E+ +GAL++ Y AGS D++L +M
Sbjct: 303 KAGRLDLAERIRGDMVK-------SGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 170 GF-VSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRI-----CLNSYGARS 223
G V+ + YN+I+ E VL M + D F+ I C N Y +
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY-VKE 414
Query: 224 DLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCED--------KA 275
+E ++ EK E D + ++T+ + +V +DK L C D +
Sbjct: 415 AVEFQRQISEKKLVE-----DIVCHNTLMHHFV----RDKKL----ACADQILGSMLVQG 461
Query: 276 YKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAE 335
DA+++ +I Y GK + + ++ K Y +++ L K G AE
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 336 KLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSM--VDKGKTPTPNSWSIIAS 393
++ E+ D N LL + G +E+A+ +L M D K+ + +++I+ +
Sbjct: 522 AVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL-K 452
+ EKA KE L + E +G P S ++++ + +R E+V + + L
Sbjct: 578 HLCKFGSYEKA----KEVLKFMVE-RGVVPDSITYGTLITSFSKHRSQEKVVELHDYLIL 632
Query: 453 KVMSMNRDMYLSLIK 467
+ ++ + +YLS+++
Sbjct: 633 QGVTPHEHIYLSIVR 647
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 11/226 (4%)
Query: 256 VKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLN 315
V A + +++ +K + +RD +A+N MIS YA +G+ ++ + ++ L + K
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 316 REYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRS 375
I++L +LG L++ E + ++ L+ Y++ G +EKA +
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 376 MVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWV 435
M +K +WS +G EK + F L + G P + S+L
Sbjct: 301 MEEK----NVYTWSSALNGLAMNGFGEKCLELFS-----LMKQDGVTPNAVTFVSVLRGC 351
Query: 436 TDNRDIEEVEDFVNSLKKVMSMNRDM--YLSLIKLYVRCGREVDGV 479
+ ++E + +S++ + + Y L+ LY R GR D V
Sbjct: 352 SVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 154/390 (39%), Gaps = 50/390 (12%)
Query: 77 IVKTLRTRKRFTQALQVSEWMSSKGL-----CPILPGDRAVQLELIGR-VRGLESAESYF 130
I++ L RK F+ + V + M +G+ C + D V++ + R + E +ES+
Sbjct: 157 ILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFG 216
Query: 131 QNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQH 190
S TE + ALL C V + S K YN ++S +++ +
Sbjct: 217 VKCS----TESFN-ALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 191 EKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYST 250
E++ VL M E G PD SY + G + + ++ + I+ +G++ D Y+
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP-DANVYNA 330
Query: 251 VANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWK------ 304
+ ++ A D+++ Y ++ D+ + + Y+ ++S K D + +++
Sbjct: 331 MICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG 390
Query: 305 ----------LQKDNCKKQLNREYITML------GC----------LVKLGDLEEAEKLL 338
K C + + GC L +L + LL
Sbjct: 391 VLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLL 450
Query: 339 GQW---ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGH 395
W + SG D +V ++ G G +E A ++ + KG P +S ++S
Sbjct: 451 NVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Query: 396 VAKENMEKAFQCF---KEALAVLAENKGWR 422
+A E A++ F K+A A WR
Sbjct: 511 MASNKTELAYKLFLKIKKARATENARSFWR 540
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 122/270 (45%), Gaps = 20/270 (7%)
Query: 167 KDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE 226
KD+G Y+ I+ R + + DVL M +GV+PD+ I ++S+ +
Sbjct: 149 KDVG-----SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 227 NMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKR----DAVA 282
+L E+ E+ G + ST + + L +++ + K A K D+ +
Sbjct: 204 RAIELFEESESFG------VKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS 257
Query: 283 YNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWE 342
YN MIS ++ LG+ ++M ++ K ++ Y ++ L + G + ++ ++ +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 343 LSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENME 402
GN D V N ++ + +++ R M+D+ P ++S + SG + +
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVS 377
Query: 403 KAFQCFKEALAVLAENKGWRPKSDVVSSIL 432
A + F+E L+ +G P + +V+S L
Sbjct: 378 DALEIFEEMLS-----RGVLPTTGLVTSFL 402
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 163/394 (41%), Gaps = 32/394 (8%)
Query: 90 ALQVSEWMSSKGLCP-------ILPGDRAVQLELIGRVRGLESAESYFQNLSDSDKTEKV 142
AL++ + M + L P +LP A++L +G+ + S F +L + +
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN------I 273
Query: 143 HGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKE 202
AL++ Y GS++ + M + VS +N+++ Y + E ++ + M +
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVS---WNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 203 DGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKD 262
+GV P S L++ DLE + + K+ E + + +++ + Y K D
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLER-GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 263 KALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITML 322
A K + R V++N MI +A G+ D + + + K Y++++
Sbjct: 390 TAASMFGKLQS----RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 323 GCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKT 382
+ +L A+ + G S + V L+ Y++ G I A + M ++ T
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 383 PTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIE 442
+W+ + G+ + A + F+E + +P S++S + + +E
Sbjct: 506 ----TWNAMIDGYGTHGFGKAALELFEE-----MQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 443 EVEDFVNSLKKVMS--MNRDMYLSLIKLYVRCGR 474
+K+ S ++ D Y +++ L R GR
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 39/296 (13%)
Query: 228 MEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMI 287
M++L +I G ++ D + +T+ + Y K G LI K D+ RD ++N +I
Sbjct: 128 MDQLHCQINRRG-LSADSLLCTTLLDAYSKNG----DLISAYKLFDEMPVRDVASWNALI 182
Query: 288 SHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNT 347
+ S + + M L+K + ++ + LG LGD++E E + + +
Sbjct: 183 AGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY----SN 238
Query: 348 YDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQC 407
+ V N + YS+ G ++KA + K T W+ + +G +A +
Sbjct: 239 DNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVT---WNTMITGFAVHGEAHRALEI 295
Query: 408 FKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVED----FVNSLKKVMSMNRDMYL 463
F + E+ G +P DV S L+ +T R VE F N K + N Y
Sbjct: 296 FDK-----LEDNGIKP-DDV--SYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG 347
Query: 464 SLIKLYVRCG--REVDGVLESMK-------------ADNIELDEEMEEILNSRLQQ 504
++ L R G RE ++ SM A I D EM EI + +++
Sbjct: 348 CVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 246 MTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKL 305
+ Y + ++ A D A Y K DK ++D VA+N +I+ +A GK ++ + L+
Sbjct: 22 LIYVQNSLLHLYANCGDVASAY--KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 79
Query: 306 QKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGL 365
K +++L K+G L +++ G T + N+LL Y+R G
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 366 IEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFK 409
+E+A+T+ MVDK SW+ + G ++A + FK
Sbjct: 140 VEEAKTLFDEMVDKNSV----SWTSLIVGLAVNGFGKEAIELFK 179
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 125/295 (42%), Gaps = 18/295 (6%)
Query: 105 ILPG-DRAVQLELIGRVRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQM 163
+LPG + AV +G+V + D++ V LL Y +D +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGF-----DTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 164 QKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARS 223
+++ + V+ +N +++ Y + + + + M++ G P F++ L +
Sbjct: 208 EEIPEKDSVT---FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 224 DLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAY 283
D + + L + + D + + +FY K D+ L + D+ + D V+Y
Sbjct: 265 DFA-LGQQLHALSVTTGFSRDASVGNQILDFYSK---HDRVL-ETRMLFDEMPELDFVSY 319
Query: 284 NHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWEL 343
N +IS Y+ + + + ++ + + N + TML L L+ +L Q L
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 344 SGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
+ V N L+ Y++ + E+AE + +S+ + T SW+ + SG+V K
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR----TTVSWTALISGYVQK 430
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 125/303 (41%), Gaps = 12/303 (3%)
Query: 130 FQNLSDSDKTEKVHGALLNCYVMA-------GSVDKSLSQMQKMKDMGFVSPLHYNNIMS 182
F+ +S+ +VHG L + ++ ++D+ L +K D+ S IM
Sbjct: 74 FKRSCESESFRQVHG-LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIK--SEDFVIRIML 130
Query: 183 LYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIA 242
LY + E + M E + S+ L++Y L+ K +++ + I
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 243 VDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL 302
D +TY+T+ + G D L ++ E ++ D +++N ++ + + R+
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 303 WKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSR 362
W L K R Y + + L + +A L+ + G + D N L+ Y
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 363 KGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEAL--AVLAENKG 420
+E+ M +KG TP ++ ++ K ++++A + +EA+ +L+
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Query: 421 WRP 423
++P
Sbjct: 371 YKP 373
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 149/359 (41%), Gaps = 71/359 (19%)
Query: 177 YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLE-------NME 229
+N+++S+Y+ + KV + E+ + P+ F++ I L++ +++E +M
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 230 KL-LEKIETEGDIAVD----------------WMT------YSTVANFYVKAGLKDKALI 266
K+ LE+ G VD W+ ++ + + YVKAGL ++A++
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 267 YLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRL-----------WKLQ-----KDNC 310
++ D+ ++ D +A+ +I+ Y LGK KD L W + K C
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 311 KKQLNREYITMLGCLVK-----LGDLEEAEKLLGQWELS----------GNTYDFKVPNI 355
+ + M VK LG + A ++ +L G + V +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 356 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 415
L+ YS+ +E A + ++ +K W+ + G+ K + F +
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDV----FWNAMIRGYAHNGESHKVMELFMD----- 418
Query: 416 AENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVN-SLKKVMSMNRDMYLSLIKLYVRCG 473
++ G+ +S+LS + D+E F + +KK ++ N + +L+ +Y +CG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 278 RDAVAYNHMISHYASLGKKKDMMRLWKLQK--DNCKKQLNREYITMLGCLVKLGDLEEAE 335
++ + +N ++ +G KD R+ + + D + Y ML C V+ + E+A+
Sbjct: 90 KNTITWNSLL-----IGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQ 144
Query: 336 KLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGH 395
+ D N ++ GY+R+G +EKA + SM++K + SW+ + SG+
Sbjct: 145 SFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGY 196
Query: 396 VAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSW---VTDNRDIEEVEDFVNSLK 452
+ ++EKA FK A V +++W +T ++VE ++
Sbjct: 197 IECGDLEKASHFFKVA---------------PVRGVVAWTAMITGYMKAKKVE-LAEAMF 240
Query: 453 KVMSMNRDM--YLSLIKLYVRCGREVDGV 479
K M++N+++ + ++I YV R DG+
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGL 269
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 141/347 (40%), Gaps = 43/347 (12%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V A ++ +V SVD + ++M + + +N ++S + ++ +K + M+
Sbjct: 89 VGTATVDMFVKCNSVDYAAKVFERMPERDATT---WNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEG-DIAVDWMTYSTVANFYV---- 256
+ ++PD + + S + E KLLE + G + VD TVAN ++
Sbjct: 146 LNEITPDSVTVMTLIQS----ASFEKSLKLLEAMHAVGIRLGVD--VQVTVANTWISTYG 199
Query: 257 KAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNR 316
K G D A + + + R V++N M Y+ G+ D L+ L L
Sbjct: 200 KCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAYSVFGEAFDAFGLYCLM-------LRE 250
Query: 317 EYITMLGCLVKLGDLEEAEKLLGQWELS-------GNTYDFKVPNILLIGYSRKGLIEKA 369
E+ L + L + + L Q L G D + N + YS+ +
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS----ED 306
Query: 370 ETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVS 429
R + D + T SW+++ SG+ K +M++A F + G +P +
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI-----KSGEKPDLVTLL 361
Query: 430 SILSWVTDNRDIEEVEDFVNSLKKVMSMNRDMYL---SLIKLYVRCG 473
S++S + E ++++ + RD + +LI +Y +CG
Sbjct: 362 SLISGCGKFGSL-ETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 81 LRTRKRFTQALQVSEWMSSKGLCPILPGDRAVQLELIGRVRGLESAESYFQNLSDS--DK 138
LR+RK+ + A+++ M SKG CP + + + + +E+A YF ++ DS
Sbjct: 344 LRSRKK-SDAIKLFHVMKSKGPCPNVRS-YTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 139 TEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVL 197
V+ L+ + +D +++M++ G YN ++ L + E +
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
M ++ + P I ++ + + SY + E + E++ +G I D +Y+ + +
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG-ICPDDNSYTVLIRGLIG 520
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGK 295
G +A YL++ DK K + YN + + G+
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 125/285 (43%), Gaps = 22/285 (7%)
Query: 146 LLNCYVMAGSVDKSLSQMQKMKDMG-FVSPLHYNNIM-SLYTRTEQHEKVPDVLAMMKED 203
LL+ + +G + +L + M+++G ++P Y++++ +L + E + + +++
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 204 GVSPDIFSYRICLNSY--GA-----------RSDLEN-MEKLLEKIETEGDIAVDWMTYS 249
D + R+ + SY G R+D+ + +++ EK++ D +Y+
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYN 252
Query: 250 TVANFYVKAGLKDKALIYLKKCEDKA------YKRDAVAYNHMISHYASLGKKKDMMRLW 303
+ + G D AL K+ ++++ + D YN +I GK KD + +W
Sbjct: 253 ICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVW 312
Query: 304 KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRK 363
K + + N Y ++ K +++A ++ G+ + +G D V N LL G +
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA 372
Query: 364 GLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCF 408
+ +A + MV +G + +++I+ G E F F
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 158/377 (41%), Gaps = 44/377 (11%)
Query: 120 VRGLESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKM-----------KD 168
V+ +S ++F KT+ +H ++ ++G + +LS + ++
Sbjct: 15 VKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEE 74
Query: 169 MGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVS--PDIFSYRICLNSYGARSDLE 226
M S L YN ++ +Y R + V M +GV PD ++Y + G +L+
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAG---ELK 131
Query: 227 NMEKLLEKIETEGDIAVDWM-----TYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAV 281
+M+ + G I W + + Y+ G + A + D RD +
Sbjct: 132 SMKL---GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMA----RDVFDVMKNRDVI 184
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLE---EAEKLL 338
++N MIS Y G D + ++ + + ++ML L DLE KL+
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 339 GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAK 398
+ L +V N L+ Y + G +++A R + D+ + +W+ + +G+
Sbjct: 245 EEKRLGDK---IEVKNALVNMYLKCGRMDEA----RFVFDRMERRDVITWTCMINGYTED 297
Query: 399 ENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVN-SLKKVMSM 457
++E A + L L + +G RP + ++S++S D + + + ++++ +
Sbjct: 298 GDVENALE-----LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 458 NRDMYLSLIKLYVRCGR 474
+ + SLI +Y +C R
Sbjct: 353 DIIIETSLISMYAKCKR 369
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 136/321 (42%), Gaps = 17/321 (5%)
Query: 160 LSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVL-AMMKEDGVSPDIFSYRICLNS 218
LSQ+ + + S + YN I+ + + + E+ V M K DG + +Y + LN
Sbjct: 129 LSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNR 187
Query: 219 YGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKR 278
Y A ++ + E+ E I D + + + + + + A L + +
Sbjct: 188 YAAAHKVDEAVGVFER-RKEFGIDDDLVAFHGLLMWLCRYKHVEFAET-LFCSRRREFGC 245
Query: 279 DAVAYNHMISHYASLGKKKDMMRLWK-LQKDNCKKQLNREYITMLGCLVKLGDLEEAEKL 337
D A N +++ + LG + R WK + C+ + Y TM+ L K G L +A +L
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDV-VSYGTMINALTKKGKLGKAMEL 304
Query: 338 L-GQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHV 396
W+ N D K+ N ++ K I +A + R + +KG P +++ +
Sbjct: 305 YRAMWDTRRNP-DVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC 363
Query: 397 AKENMEKAFQCFKEALAVLAENKG--WRPKSDVVSSILSWVTDNRDIEEVEDFVNSLKKV 454
EK ++ +E E KG P S +L + ++D++ V + + K
Sbjct: 364 KIRRTEKVWELVEE-----MELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERM--AKNK 416
Query: 455 MSMNRDMYLSLIKLYVRCGRE 475
M D+Y + +LYV+ +E
Sbjct: 417 CEMTSDLYNLMFRLYVQWDKE 437
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 76/170 (44%)
Query: 195 DVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANF 254
D++ + E PD ++Y L DL + + ++++ + D+ D ++++ + +
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 255 YVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQL 314
+ +A+ + K + +K D YN ++ + +L K + + ++K K+ +
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 315 NREYITMLGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKG 364
Y T++ L K G +EEA L +G D L+ G RKG
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 161/410 (39%), Gaps = 40/410 (9%)
Query: 46 SPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRKRFTQALQVSEWMSSKGLCPI 105
SPL PS SV L N A +++++L + QA++V SS
Sbjct: 23 SPLKPPSCSVA--LNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESS------ 74
Query: 106 LPGDRAVQLELI--GRVRGLESAESYFQNLSD--SDKTEKVHGALLNCYVMAGSVDKSLS 161
P + +L ++ G L A +++ D SD+ + L+ Y GSVD +
Sbjct: 75 -PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 162 QMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY----RICLN 217
K + +N + T E+V + M GV D F+Y + C+
Sbjct: 134 VFDKTRKRTIYV---WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 218 SYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYK 277
S + L +++ + G + ++ +T+ + Y + G D Y
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIM-TTLVDMYARFGCVD----YASYVFGGMPV 245
Query: 278 RDAVAYNHMISHYASLGKKKDMMRLWKLQ----KDNCKKQLNREYITMLGCLVKLGDLEE 333
R+ V+++ MI+ YA GK + +R ++ KD+ + +++L L LE+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT--MVSVLQACASLAALEQ 303
Query: 334 AEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIAS 393
+ + G G V + L+ Y R G +E + + M D+ SW+ + S
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV----SWNSLIS 359
Query: 394 GHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEE 443
+ +KA Q F+E LA G P S+L + +EE
Sbjct: 360 SYGVHGYGKKAIQIFEEMLA-----NGASPTPVTFVSVLGACSHEGLVEE 404
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 27/263 (10%)
Query: 123 LESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF-VSPLHYNNIM 181
L+SA F + + D +++N +V GS DK+L +KM+ S + ++
Sbjct: 182 LDSACKVFTTIKEKDVVS--WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 182 SLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDI 241
S + E V + ++E+ V+ ++ L+ Y +E+ ++L + +E +
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK--- 296
Query: 242 AVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMR 301
D +T++T+ + Y + + A ++ + ++D VA+N +IS Y GK + +
Sbjct: 297 --DNVTWTTMLDGYAISEDYEAA----REVLNSMPQKDIVAWNALISAYEQNGKPNEALI 350
Query: 302 LW---KLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQWELS-----GNTYDFKVP 353
++ +LQK+ Q+ ++ L ++G LE LG+W S G +F V
Sbjct: 351 VFHELQLQKNMKLNQIT--LVSTLSACAQVGALE-----LGRWIHSYIKKHGIRMNFHVT 403
Query: 354 NILLIGYSRKGLIEKAETMLRSM 376
+ L+ YS+ G +EK+ + S+
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSV 426
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCL---VKLG 329
DK +R V++N MIS Y+ G KD + +++ K K + Y+T++ L +LG
Sbjct: 232 DKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK---KGDIRPNYVTLVSVLPAISRLG 288
Query: 330 DLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPN--S 387
LE E L E SG D + + L+ YS+ G+IEKA + + P N +
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE------RLPRENVIT 342
Query: 388 WSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDF 447
WS + +G A CF + G RP ++L+ + +EE +
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCK-----MRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 448 VNSLKKV 454
+ + V
Sbjct: 398 FSQMVSV 404
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 17/338 (5%)
Query: 142 VHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMK 201
V AL++ Y G + ++ +M VS +N+++S Y+ +E+ ++ +K
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVS---WNSLISGYSSHGYYEEALEIYHELK 199
Query: 202 EDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLK 261
+ PD F+ L ++G ++ + L + + + + + Y+K
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 262 DKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITM 321
A ++ D+ RD+V+YN MI Y L ++ +R++ D K L +
Sbjct: 259 TDA----RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVL 314
Query: 322 LGCLVKLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGK 381
C L DL A+ + +G + V NIL+ Y++ G + A + SM K
Sbjct: 315 RAC-GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 382 TPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDI 441
SW+ I SG++ ++ +A + FK + ++ E + ++ S+ + + D +
Sbjct: 374 V----SWNSIISGYIQSGDLMEAMKLFK--MMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 442 EEVEDFVNSLKKVMSMNRDMYLSLIKLYVRCGREVDGV 479
+ + N +K + ++ + +LI +Y +CG D +
Sbjct: 428 KGLHS--NGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 15/303 (4%)
Query: 145 ALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKED 203
++LN V D Q M G V +H Y + + + K +L M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 204 GVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDK 263
G+ P+++ Y I + + +E EK+ E ++ G + + TYS + + Y K G +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG-VLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 264 ALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLG 323
A K+ + V + ++ + K ++++ L K ++ + +
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFC---KARELVTARSLFVHMVKFGVDPN-LYVYN 343
Query: 324 CLV----KLGDLEEAEKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDK 379
CL+ K G++ EA LL + E + D IL+ G + + +A + + M ++
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 380 GKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNR 439
P+ +++ + G+ + NME+A E A G P S+++ + R
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA-----SGVEPNIITFSTLIDGYCNVR 458
Query: 440 DIE 442
DI+
Sbjct: 459 DIK 461
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 18/266 (6%)
Query: 156 VDKSLSQMQKMKDM---GFVSPLHYNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSY 212
V++ L + K +M GFV+ I++LY R E V M E S+
Sbjct: 90 VEEILEEQNKYPNMSKEGFVA-----RIINLYGRVGMFENAQKVFDEMPERNCKRTALSF 144
Query: 213 RICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCE 272
LN+ + +E + +++ + I D +Y+T+ G +A+ + + E
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 273 DKAYKRDAVAYNHMISHYASLGKKKDMMRLW-KLQKDNCKKQLNREYITMLGCLVKLGDL 331
+K K D + +N ++ + GK ++ ++W ++ + N K+ + R Y L L
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI-RSYNARLLGLAMENKS 263
Query: 332 EEA----EKLLGQWELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNS 387
EE +KL G EL + + F ++ G+ +G +++A T + + G P
Sbjct: 264 EEMVSLFDKLKGN-ELKPDVFTFTA---MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 388 WSIIASGHVAKENMEKAFQCFKEALA 413
++ + ++E A++ KE A
Sbjct: 320 FNSLLPAICKAGDLESAYELCKEIFA 345
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 153/350 (43%), Gaps = 31/350 (8%)
Query: 115 ELIGRVRG---LESAESYFQNLSDSDKTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGF 171
E+ VRG L S E + LS + E V L C+ + + + + K KD GF
Sbjct: 128 EITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWV-KQKD-GF 185
Query: 172 VSPLH-YNNIMSLYTRTEQHEKVPDVLAMMKEDGVSPDIFSYRICLNSYGARSDLENMEK 230
+ YN ++S+ + V ++++ M+++G DI ++ I ++ YG +
Sbjct: 186 SHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLL 245
Query: 231 LLEKIETEGDIAVDWMTYSTVANFYVKAGLKDKALIYLKKCEDKA-------YKR--DAV 281
+ EK+ G +D Y+ + AG D AL + K+ +K YK D +
Sbjct: 246 VFEKMRKSG-FELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCI 304
Query: 282 AYNHMISHYASLGKKKDMMRLWKLQKDNCKKQLNREYITMLGCLVKLGDLEEAEKLLGQW 341
A + + S+ DM+R+ ++ + + L + + C+ G ++EA +L+ +
Sbjct: 305 AKSEKVDVVQSIA--DDMVRICEISEHDAFGYLLKSF-----CVS--GKIKEALELIREL 355
Query: 342 ELSGNTYDFKVPNILLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENM 401
+ D K IL+ G R + A ++ ++ + K N + II SG++ + ++
Sbjct: 356 KNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDV 414
Query: 402 EKAFQCFKEALAVLAENKGWRPKSDVVSSILSWVTDNRDIEEVEDFVNSL 451
KA + F+ + + G P+ + I+ + + E+ + N +
Sbjct: 415 SKALEQFE-----VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEM 459
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 192/475 (40%), Gaps = 82/475 (17%)
Query: 32 TTVTINRRNLYSRISPLGDPSLSVVPVLENWLQEGHAVRDQELQRIVKTLRTRK------ 85
T++ + +L R+S L D L++ N ++ V DQ+ Q + +T R
Sbjct: 20 TSLPAHHTDLVQRVSILKDELLTI----GNSKEKFQNVLDQKGQWLFRTYRDGAGILELM 75
Query: 86 -----RFTQALQVSEWM-SSKGLC-PILPGDRAVQLELIGRVRGLESAESYFQNLSDSD- 137
R ALQV EW K C P+ + A +++ GR R + A F +
Sbjct: 76 DQLFPRHYLALQVLEWRRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLFDEAAKKRM 135
Query: 138 KTEKVHGALLNCYVMAGSVDKSLSQMQKMKDMGFVSPLHYNNIMSLYTRTEQHEKVPDVL 197
+T V+ +L++ Y+ G ++ S + +
Sbjct: 136 QTASVYNSLMSVYMWNGLAEECQSLFKDFR------------------------------ 165
Query: 198 AMMKEDGVSPDIFSYRICLNSYGARSDLENMEKLLEKIETEGDIAVDWMTYSTVANFYVK 257
++ +P + +Y I ++ YG ++NME E+++ + + + +TY+ + Y+
Sbjct: 166 ---RQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQ-KVKLPPNSVTYNFLIAGYMT 221
Query: 258 AGLKDKALIYLKKCEDKAYKRDAVAYNHMISHYASLGKKKDMMRLWKLQKDNC---KKQL 314
A DK ++ + + D Y M+ YA+ G M ++++ KD L
Sbjct: 222 AWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQVGVNSGPL 281
Query: 315 NREYITMLGCLVKLGD-LEEAEKLLGQWELSGNTYDFKVP--NILLIG-YSRKGLIEKAE 370
R I C + D +++ E LL LSG Y +P N+LLI Y+++ +E E
Sbjct: 282 VRAMICAY-CKKAVEDRVQKIENLLSL--LSGEEY---LPWLNVLLIRLYAQEDFVEAME 335
Query: 371 TMLRSMVDKGKTPTPNSW--SIIASGHVAKENMEKAFQCFK-EALAVL---AENKGWRPK 424
+ + ++ +S +IIA+ F+C + + LA AE+ GW+
Sbjct: 336 SKINEAFEQKTCVNKSSIMRAIIAA----------YFRCNEVDNLANFVKRAESAGWKLC 385
Query: 425 SDVVSSILSWVTDNRDIEEVEDFVNSLKKV-MSMNRDMYLSLIKLYVRCGREVDG 478
+ + + EE+E VN + + + + +IK Y G E D
Sbjct: 386 RSLYHCKIMMYGSQKRFEEMEGVVNEMAETNYGLVTKTFAIMIKAYKNHGMESDA 440