Miyakogusa Predicted Gene

Lj0g3v0287399.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287399.2 Non Chatacterized Hit- tr|K4B3P8|K4B3P8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,31.88,0.0000000000003,seg,NULL,CUFF.19205.2
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38980.1 | Symbols:  | unknown protein; Has 44 Blast hits to ...    55   3e-08

>AT4G38980.1 | Symbols:  | unknown protein; Has 44 Blast hits to 44
           proteins in 19 species: Archae - 0; Bacteria - 2;
           Metazoa - 2; Fungi - 8; Plants - 24; Viruses - 0; Other
           Eukaryotes - 8 (source: NCBI BLink). |
           chr4:18166898-18167740 REVERSE LENGTH=280
          Length = 280

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 121/273 (44%), Gaps = 71/273 (26%)

Query: 25  QQNEVLSAEDLAWADSCIIK---DSDVPVGDWIPLRDALLEIISSQSQSF--SNDIGEDV 79
           +  E LS E +AWADSCII    DSD    +W   RDAL EII    + F  S+  G   
Sbjct: 15  RNEEDLSPECVAWADSCIISFLDDSDN--NNWGTFRDALTEIIDIHPEMFVFSSTTGTRG 72

Query: 80  EILPDIEESNTKTI---RLEP-----NQESSTSDEE---------HLSRPSS-------- 114
            + PD   + ++TI   R EP     N  +++S+EE           S PS         
Sbjct: 73  VLSPDEVMTESETIDLRRSEPAAGSANSRTNSSNEEVSEIISMLTFESDPSKNCLEDYYF 132

Query: 115 --SHNVNPIRMVAETSTDEIPDIES-----------------------YHRSPFLPTYNE 149
             S   N  R  A+ S  ++  +ES                         +  F+ TY E
Sbjct: 133 PESIAENGNREPADGSKTDLGGVESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVE 192

Query: 150 ELNQNENIDSGLVLDSSAFEMENTSENLFKIWDWDIPS---EEGELAEQLDKALTEN-TF 205
           +  ++ N+    V        + TS+ +FK+WD ++     EE  L  QL KAL E+ T 
Sbjct: 193 DNAEDCNVTEDPV--------KVTSQEIFKVWDLEVVGDNDEEDGLVLQLKKALDESSTV 244

Query: 206 QAGPSSVDDSGKLGDLKEGSLDDLIAGIADLSL 238
           Q  P  ++D   +   ++ ++DDLI+GI+DLSL
Sbjct: 245 QPLPQPLNDDQVVS--EKSNIDDLISGISDLSL 275