Miyakogusa Predicted Gene

Lj0g3v0287249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287249.1 Non Chatacterized Hit- tr|F5YBJ6|F5YBJ6_TREAZ
Putative uncharacterized protein OS=Treponema
azotonut,28.01,3e-16,HES-B -LIKE,NULL; IRON-SULFUR CLUSTER ASSEMBLY
PROTEIN,NULL; seg,NULL,CUFF.19197.1
         (571 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03900.2 | Symbols:  | Iron-sulphur cluster biosynthesis fami...   641   0.0  
AT5G03900.1 | Symbols:  | Iron-sulphur cluster biosynthesis fami...   502   e-142

>AT5G03900.2 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr5:1048338-1051869 FORWARD LENGTH=523
          Length = 523

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/456 (69%), Positives = 376/456 (82%), Gaps = 7/456 (1%)

Query: 118 IKPGGVVETDKLPTEVRKRTMEAVDASGGRVTIGDVASRAGLKLVEAQKALQALAADTDG 177
           IKPGG+VE+DKLPT+VRKR M+AVD  G RVT+GDVASR GLK+ EAQ ALQA+AADTDG
Sbjct: 73  IKPGGLVESDKLPTDVRKRAMDAVDECGRRVTVGDVASRGGLKVTEAQTALQAIAADTDG 132

Query: 178 FLEVSDEGDVLYVFRKDYRSKLAAKSFRIKAEPLIEKAKAAGEYLIRVSFGTTLIASIVI 237
           FLEVSDEGDVLYVF +DYR+KLAAKS RI+ EP +EKAK A +YL RVSFGT LIASIVI
Sbjct: 133 FLEVSDEGDVLYVFPRDYRTKLAAKSLRIQIEPFLEKAKGAVDYLARVSFGTALIASIVI 192

Query: 238 VYTAIIALLTSSRSEDDNRGRR-GRSYDSGFTFFFNPVDIFWYWDPXXXXXXXNQRMQTD 296
           VYT+IIALL SS+SEDDNR RR GRSYDSGF F+ NPVD+ WYWDP        +R + D
Sbjct: 193 VYTSIIALL-SSKSEDDNRQRRRGRSYDSGFNFYINPVDLLWYWDP---NYYNRRRARED 248

Query: 297 DDK-MNFIESVFSFVFGDGDPNQGIEEERWKLIGQYISSNGGVVAAEELAPYLDIDSTER 355
           + K MNFIESVFSFVFGDGDPNQGIEEERW++IGQYI+S GGVVAA+ELAPYLD+ S++ 
Sbjct: 249 EGKGMNFIESVFSFVFGDGDPNQGIEEERWQMIGQYITSRGGVVAADELAPYLDVPSSKS 308

Query: 356 IKDDESYILPVLLRFDGQPDVDEKGNILYRFPSLQRTASGKSRRKEYVGRRWADMIGGVE 415
             +DESYILPVLLRFDGQP++DE+GNILY FPSLQRTASG SRRKEYVG +W D +  +E
Sbjct: 309 AMNDESYILPVLLRFDGQPELDEEGNILYCFPSLQRTASGSSRRKEYVG-KWFDWVADME 367

Query: 416 KFFKEKEWPFSKTTSSERAMXXXXXXXXXXXXXXXXTMLKDMSVAPGSFIKFVTDIFPLL 475
           KFFKEK+W FSKT++SERA+                T+L +MSV PG F+ FV +I+PLL
Sbjct: 368 KFFKEKKWQFSKTSTSERALVIGLGAVNLFGVIVLNTLLNEMSVRPGGFLTFVKNIYPLL 427

Query: 476 QIYAGSFFAIPLVRWFFIRRRNADIGKRNKARLQCARVLELPDTSLSQKLISARDMAQKT 535
           QIYAGSFF IPL+RWF I+R+N  I  RNKARLQ AR LE PD +L +KL+SARDMAQKT
Sbjct: 428 QIYAGSFFTIPLIRWFSIKRKNNQIENRNKARLQFARALESPDIALRRKLLSARDMAQKT 487

Query: 536 VIGKDQIVYSTDKDLLEQDYDAREWDKKFRELERSD 571
           VIGKD+IVYSTD+D++EQ+Y+  EWD++F+ELE+SD
Sbjct: 488 VIGKDRIVYSTDRDMMEQNYETDEWDRRFKELEKSD 523


>AT5G03900.1 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr5:1048338-1050999 FORWARD LENGTH=429
          Length = 429

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/362 (69%), Positives = 295/362 (81%), Gaps = 7/362 (1%)

Query: 118 IKPGGVVETDKLPTEVRKRTMEAVDASGGRVTIGDVASRAGLKLVEAQKALQALAADTDG 177
           IKPGG+VE+DKLPT+VRKR M+AVD  G RVT+GDVASR GLK+ EAQ ALQA+AADTDG
Sbjct: 73  IKPGGLVESDKLPTDVRKRAMDAVDECGRRVTVGDVASRGGLKVTEAQTALQAIAADTDG 132

Query: 178 FLEVSDEGDVLYVFRKDYRSKLAAKSFRIKAEPLIEKAKAAGEYLIRVSFGTTLIASIVI 237
           FLEVSDEGDVLYVF +DYR+KLAAKS RI+ EP +EKAK A +YL RVSFGT LIASIVI
Sbjct: 133 FLEVSDEGDVLYVFPRDYRTKLAAKSLRIQIEPFLEKAKGAVDYLARVSFGTALIASIVI 192

Query: 238 VYTAIIALLTSSRSEDDNRGRR-GRSYDSGFTFFFNPVDIFWYWDPXXXXXXXNQRMQTD 296
           VYT+IIALL SS+SEDDNR RR GRSYDSGF F+ NPVD+ WYWDP        +R + D
Sbjct: 193 VYTSIIALL-SSKSEDDNRQRRRGRSYDSGFNFYINPVDLLWYWDP---NYYNRRRARED 248

Query: 297 DDK-MNFIESVFSFVFGDGDPNQGIEEERWKLIGQYISSNGGVVAAEELAPYLDIDSTER 355
           + K MNFIESVFSFVFGDGDPNQGIEEERW++IGQYI+S GGVVAA+ELAPYLD+ S++ 
Sbjct: 249 EGKGMNFIESVFSFVFGDGDPNQGIEEERWQMIGQYITSRGGVVAADELAPYLDVPSSKS 308

Query: 356 IKDDESYILPVLLRFDGQPDVDEKGNILYRFPSLQRTASGKSRRKEYVGRRWADMIGGVE 415
             +DESYILPVLLRFDGQP++DE+GNILY FPSLQRTASG SRRKEYVG +W D +  +E
Sbjct: 309 AMNDESYILPVLLRFDGQPELDEEGNILYCFPSLQRTASGSSRRKEYVG-KWFDWVADME 367

Query: 416 KFFKEKEWPFSKTTSSERAMXXXXXXXXXXXXXXXXTMLKDMSVAPGSFIKFVTDIFPLL 475
           KFFKEK+W FSKT++SERA+                T+L +MSV PG F+ FV +I+PLL
Sbjct: 368 KFFKEKKWQFSKTSTSERALVIGLGAVNLFGVIVLNTLLNEMSVRPGGFLTFVKNIYPLL 427

Query: 476 QI 477
           Q+
Sbjct: 428 QV 429