Miyakogusa Predicted Gene

Lj0g3v0287209.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287209.2 Non Chatacterized Hit- tr|I1KFJ4|I1KFJ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39742
PE,79.64,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; SISTER CHROMATID
COHESION PROTEIN DCC1-RELATED,NULL; DUF2036,Sis,CUFF.19183.2
         (395 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44580.1 | Symbols:  | zinc ion binding | chr2:18402081-18403...   426   e-119

>AT2G44580.1 | Symbols:  | zinc ion binding | chr2:18402081-18403412
           REVERSE LENGTH=386
          Length = 386

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/393 (52%), Positives = 278/393 (70%), Gaps = 17/393 (4%)

Query: 9   GGAEVLKNMSPGSSISVAYHPLFGPHDDLIFXXXXXXXXXXXXHERVVLRGQPEEDAFLC 68
           GGAE + N+  G S+ ++YHP FGPH+DL+             H+RV LRG P+EDA LC
Sbjct: 5   GGAEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLC 64

Query: 69  TPSKTYAMKFVGTSNSVLLVPPANQSEYCDNLQKNDSNSYEEKVVAPVIKVVPGSMELVE 128
           T SKTYA+KFVG SNS+ L+PP   S +  + Q +D+N+        V+K+ PG+MELVE
Sbjct: 65  TKSKTYAIKFVGNSNSMFLIPP---SIFPGDAQVSDTNNN-----VSVLKIAPGNMELVE 116

Query: 129 VAPRLDKLKLLLSENPYRXXXXXXXXXX------XXXAPITGLYSWNDLIDNIQASDEEL 182
            +PRLDKLK +L  NP+                         LY+W+DL++ +QASDEEL
Sbjct: 117 ASPRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEEL 176

Query: 183 RSGLQAISAVEINGFWRLVDESYMDMILGILLRNSVLNDWSFDALNEDEVMTTLESDGFP 242
           R+GLQ++SA+EI+GFWR++DE+Y+D+IL +LL N VL DWSFD L+EDEV+  L +D FP
Sbjct: 177 RNGLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFP 236

Query: 243 RVLARHCLRVYGEKVNDFINSCVWKLDEKKVCIHYAKKILKGGKRKLESFMDEWRQITPD 302
             LA HCLRV+G KVN+   +  WKL+ + VC+H+A++IL+  K +LESFM+EW++  PD
Sbjct: 237 SQLASHCLRVFGSKVNE---TDKWKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPD 293

Query: 303 GMQPTFDLVKGEVLTEKVGVDTWVHAFSVSSLPSTPAERFSILFRERPKWEWKDLQPYIS 362
           GM+  F++++GEVLTEK+G++T V+ FSV SLPSTP ERFS+LF+ R KWEWKDL+PY+ 
Sbjct: 294 GMEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLR 353

Query: 363 DLSVPGLSSEGLLLKYTRKTQPSPDMEPVFSAR 395
           DL VP LS EGLLLKYTR+ QP  D  PVFSAR
Sbjct: 354 DLHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386