Miyakogusa Predicted Gene

Lj0g3v0286969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286969.1 Non Chatacterized Hit- tr|B9RLN5|B9RLN5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.29,0.0000009,Presenilin, signal peptide peptidase,
family,Peptidase A22, presenilin signal peptide;
Presenilin,Pe,CUFF.19163.1
         (438 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08700.1 | Symbols: PS1 | Presenilin-1 | chr1:2769885-2771348...   483   e-137
AT2G29900.1 | Symbols: PS2 | Presenilin-2 | chr2:12749837-127510...   191   7e-49

>AT1G08700.1 | Symbols: PS1 | Presenilin-1 | chr1:2769885-2771348
           REVERSE LENGTH=453
          Length = 453

 Score =  483 bits (1244), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/459 (59%), Positives = 320/459 (69%), Gaps = 27/459 (5%)

Query: 1   MESSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTAANLVYAENPSDTTA 60
           MESS+L+S+GVEIIGVM+PVSICMF                  R+AANL+Y ENPSD+T 
Sbjct: 1   MESSILDSLGVEIIGVMAPVSICMFLVVLLTYSLSVTSDPQ-IRSAANLIYIENPSDSTT 59

Query: 61  QKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLI 120
            KLEG+L NA+VFVVLIA VTF+LVLL+YYN T FL+HY+RFSAFFVL +MGG+IFLS+I
Sbjct: 60  VKLEGSLANAIVFVVLIAAVTFILVLLFYYNFTNFLKHYMRFSAFFVLGTMGGAIFLSII 119

Query: 121 QRYSIPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWTT 180
           Q +SIP+DS TCF+LLFNFT++G LS+FA G+PI++RQ YMV +GI+VAAWFT+LPEWTT
Sbjct: 120 QHFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWTT 179

Query: 181 WTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVTGG------GSTL 234
           W                PGGPLKLLVELASSR+EELPA+VYEARPTV+ G      GS+L
Sbjct: 180 WFILVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQRRNRGSSL 239

Query: 235 GNLVTGVSESESSSIELQAVSS--VVRXXXXXXXXSDSGAVVVRVEDLQXXXXXXXXXXX 292
             LV G   S+S S+ELQAV +  V +         D  A+ VR  D             
Sbjct: 240 RALVGGGGVSDSGSVELQAVRNHDVNQLGRENSHNMDYNAIAVRDID-----NVDDGIGN 294

Query: 293 XXXXXXXXSPLVGNSA---------MRFDGRQGEIVGDEEMSPLVEMTDMENGREMGR-- 341
                   SPLVG+ +          R +    E V DEEMSPLVE+    + RE  R  
Sbjct: 295 GSRGGLERSPLVGSPSASEHSTSVGTRGNMEDRESVMDEEMSPLVELMGWGDNREEARGL 354

Query: 342 --RDDDEEISERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVC 399
              D+  +IS RGIKLGLGDF+FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSV 
Sbjct: 355 EESDNVVDISNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVY 414

Query: 400 RQALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
            +ALPALPISI LGV+FYFLTRLLMEPF+VG  TNLMMF
Sbjct: 415 NRALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF 453


>AT2G29900.1 | Symbols: PS2 | Presenilin-2 | chr2:12749837-12751030
           FORWARD LENGTH=397
          Length = 397

 Score =  191 bits (486), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 107/247 (43%), Positives = 151/247 (61%), Gaps = 2/247 (0%)

Query: 4   SVLESIGVEIIGVMSPVSICMFXXXXXX--XXXXXXXXXXXFRTAANLVYAENPSDTTAQ 61
           S+L+S+G E+I +++PVSICMF                   F + A   Y+E+ SD++  
Sbjct: 9   SILDSLGEELIAILTPVSICMFTVVLLVCILNSDPSSSSASFSSIATAAYSESDSDSSWD 68

Query: 62  KLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLIQ 121
           K  GALLN+VVFV  I + TF+LVLL+Y  C  FL+ Y+ FSAF VL ++GG I + LI 
Sbjct: 69  KFVGALLNSVVFVAAITVATFVLVLLFYLRCVKFLKFYMGFSAFIVLGNLGGEILVLLID 128

Query: 122 RYSIPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWTTW 181
           R+  P+DS T  +LLFNF+VVGV ++F +   IL+ Q Y+V +G++VA +FT LPEWTTW
Sbjct: 129 RFRFPIDSITFLILLFNFSVVGVFAVFMSKFSILITQGYLVWIGVLVAYFFTLLPEWTTW 188

Query: 182 TXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVTGGGSTLGNLVTGV 241
                           P GPL+LLVE+A SR+E++PALVYEARP +     ++   V   
Sbjct: 189 VLLVALALYDIAAVLLPVGPLRLLVEMAISRDEDIPALVYEARPVIRNDSRSVQRRVWRE 248

Query: 242 SESESSS 248
             S  ++
Sbjct: 249 QRSSQNN 255



 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 11/111 (9%)

Query: 339 MGRRDDDEEISER-----------GIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIIS 387
           + RR +  E SE             IKLGLGDF+FYSVLVGRAAMYDLMTVYACYLAII+
Sbjct: 287 IDRRPEQAENSETFLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIIA 346

Query: 388 GLGCTLILLSVCRQALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
           GLG TL+LLSV ++ALPALP+SI LGV+FYFL RLL+E F+V  ++NL+MF
Sbjct: 347 GLGITLMLLSVYQKALPALPVSIMLGVVFYFLARLLLEVFVVQCSSNLVMF 397