Miyakogusa Predicted Gene

Lj0g3v0286519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286519.1 Non Chatacterized Hit- tr|G7JQJ9|G7JQJ9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,56.32,2e-18,F-box domain,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; seg,NULL; no
description,NUL,gene.g22301.t1.1
         (454 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80960.1 | Symbols:  | F-box and Leucine Rich Repeat domains ...    69   6e-12
AT1G80960.2 | Symbols:  | F-box and Leucine Rich Repeat domains ...    69   6e-12
AT1G67390.1 | Symbols:  | F-box family protein | chr1:25244690-2...    67   2e-11
AT1G80960.3 | Symbols:  | F-box and Leucine Rich Repeat domains ...    67   3e-11
AT3G60790.1 | Symbols:  | F-box family protein | chr3:22464623-2...    65   7e-11
AT5G53840.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    49   7e-06

>AT1G80960.1 | Symbols:  | F-box and Leucine Rich Repeat domains
           containing protein | chr1:30416065-30418220 FORWARD
           LENGTH=486
          Length = 486

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 192/466 (41%), Gaps = 70/466 (15%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRN--VHAVR 59
           IS LPD++L  I+S LS +EA+RTS++SK W  +W   S L FD  + I   N  +    
Sbjct: 52  ISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSN 111

Query: 60  KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFL--VERNKNLISLTLECIKT 117
               L++ V+N H   L  C   ++        L + ++ L  V+R K    LTL     
Sbjct: 112 PVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTK---VLTL----- 163

Query: 118 RPYFPSVMLNFKSGIFS-------NLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIM 170
           R ++ +    FK+  FS       +L SL L++Y +   ++     C           + 
Sbjct: 164 RYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLE--SSHPLRNCSNLRTLKLLSIVA 221

Query: 171 EEQAV-NDVLENCSSLERFILVESTGFKK----LKIRNPSLNFLELRWLV-VNEIDVFVE 224
            E  V N VL +C  LE  +L     FKK    LKI N  L  L++  L  ++ I+V   
Sbjct: 222 PEIGVFNRVLASCPCLEVLVL-GICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTT 280

Query: 225 NLHEVVIDSILCPSKGLKIYIVDLRIFHS--TCNPIAQEIQAKYLGESIMKSQDILENCS 282
           +L  + I  I C    L +    L+   +     P    I      E  + +++ +    
Sbjct: 281 SLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIY 340

Query: 283 GLFESQPINIFRNL---LTMSIDLDLN-------------YIREALALSFVLRSCHCLES 326
           G    + +  F NL   L++S+DL +N             + R+ L L  + +  +    
Sbjct: 341 G----ELLRPFANLYVALSVSVDL-MNPTEVERLRQVLGLWTRKILELEIIFKDNNGPRE 395

Query: 327 LDITIPVKKGSDTSDDGALPFPKSMFWERRNCVNHKLKFVTVRGFTGKELEGKFVEHLIA 386
            + +   K   D +     PFP + F         ++  V +  F+G E E   +  LI 
Sbjct: 396 ENKSWDKKLWEDNNKKD--PFPNAKF---------RVDTVWMYNFSGSEEEFALMTCLIR 444

Query: 387 RAVMVKKITIICNFSIVEEARKLLSQRRLSVYLSIILKSRRQIKLT 432
           +  +V+K+ I        +     +++RL +  ++      Q KLT
Sbjct: 445 QGTVVEKMMI--------KTSTFPARKRLKIEAAVAKLQALQTKLT 482


>AT1G80960.2 | Symbols:  | F-box and Leucine Rich Repeat domains
           containing protein | chr1:30416065-30418220 FORWARD
           LENGTH=486
          Length = 486

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 192/466 (41%), Gaps = 70/466 (15%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRN--VHAVR 59
           IS LPD++L  I+S LS +EA+RTS++SK W  +W   S L FD  + I   N  +    
Sbjct: 52  ISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSN 111

Query: 60  KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFL--VERNKNLISLTLECIKT 117
               L++ V+N H   L  C   ++        L + ++ L  V+R K    LTL     
Sbjct: 112 PVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTK---VLTL----- 163

Query: 118 RPYFPSVMLNFKSGIFS-------NLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIM 170
           R ++ +    FK+  FS       +L SL L++Y +   ++     C           + 
Sbjct: 164 RYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLE--SSHPLRNCSNLRTLKLLSIVA 221

Query: 171 EEQAV-NDVLENCSSLERFILVESTGFKK----LKIRNPSLNFLELRWLV-VNEIDVFVE 224
            E  V N VL +C  LE  +L     FKK    LKI N  L  L++  L  ++ I+V   
Sbjct: 222 PEIGVFNRVLASCPCLEVLVL-GICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTT 280

Query: 225 NLHEVVIDSILCPSKGLKIYIVDLRIFHS--TCNPIAQEIQAKYLGESIMKSQDILENCS 282
           +L  + I  I C    L +    L+   +     P    I      E  + +++ +    
Sbjct: 281 SLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIY 340

Query: 283 GLFESQPINIFRNL---LTMSIDLDLN-------------YIREALALSFVLRSCHCLES 326
           G    + +  F NL   L++S+DL +N             + R+ L L  + +  +    
Sbjct: 341 G----ELLRPFANLYVALSVSVDL-MNPTEVERLRQVLGLWTRKILELEIIFKDNNGPRE 395

Query: 327 LDITIPVKKGSDTSDDGALPFPKSMFWERRNCVNHKLKFVTVRGFTGKELEGKFVEHLIA 386
            + +   K   D +     PFP + F         ++  V +  F+G E E   +  LI 
Sbjct: 396 ENKSWDKKLWEDNNKKD--PFPNAKF---------RVDTVWMYNFSGSEEEFALMTCLIR 444

Query: 387 RAVMVKKITIICNFSIVEEARKLLSQRRLSVYLSIILKSRRQIKLT 432
           +  +V+K+ I        +     +++RL +  ++      Q KLT
Sbjct: 445 QGTVVEKMMI--------KTSTFPARKRLKIEAAVAKLQALQTKLT 482


>AT1G67390.1 | Symbols:  | F-box family protein |
           chr1:25244690-25247139 FORWARD LENGTH=479
          Length = 479

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAV--R 59
           IS LPD++L  I++SLS ++A++TS+LS  W  +W+    L FD         + A    
Sbjct: 43  ISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFDLLSATYESGLIAALSN 102

Query: 60  KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFL-VERNKNLISLTLECIKTR 118
              E ++ V+N H   L  C   + +       L   ++ L +E+N   +SL  +  K R
Sbjct: 103 SVAESITQVINNHNGHLMGCSIHHFAHHCVNGVLENWIRLLTLEKNTRFLSLCNKLGKGR 162

Query: 119 PYFPSVMLNFKSGIFSN--LCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIMEEQAVN 176
               + +L F    FS+  L +L L  Y +  V A AF+ C           + E    N
Sbjct: 163 ---RTNVLRFSPNTFSHPKLATLFLRRYDL--VTAHAFKECENLKILKLEGILAEVDVFN 217

Query: 177 DVLENCSSLERFILVESTGFKK--LKIRNPSLNFLELRWLVVNEIDV 221
            V+ +C SL+  +L      +K  LKI N +L  L L    V+ IDV
Sbjct: 218 TVIASCPSLKVLVLNCMWYNEKTCLKIHNNNLKVLHLDCPHVDCIDV 264


>AT1G80960.3 | Symbols:  | F-box and Leucine Rich Repeat domains
           containing protein | chr1:30416065-30418220 FORWARD
           LENGTH=462
          Length = 462

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 186/450 (41%), Gaps = 62/450 (13%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRN--VHAVR 59
           IS LPD++L  I+S LS +EA+RTS++SK W  +W   S L FD  + I   N  +    
Sbjct: 52  ISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSN 111

Query: 60  KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFL--VERNKNLISLTLECIKT 117
               L++ V+N H   L  C   ++        L + ++ L  V+R K    LTL     
Sbjct: 112 PVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTK---VLTL----- 163

Query: 118 RPYFPSVMLNFKSGIFS-------NLCSLELNNYLMRRVNASAFEGCXXXXXXXXXXXIM 170
           R ++ +    FK+  FS       +L SL L++Y +   ++     C           + 
Sbjct: 164 RYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLE--SSHPLRNCSNLRTLKLLSIVA 221

Query: 171 EEQAV-NDVLENCSSLERFILVESTGFKK----LKIRNPSLNFLELRWLV-VNEIDVFVE 224
            E  V N VL +C  LE  +L     FKK    LKI N  L  L++  L  ++ I+V   
Sbjct: 222 PEIGVFNRVLASCPCLEVLVL-GICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTT 280

Query: 225 NLHEVVIDSILCPSKGLKIYIVDLRIFHS--TCNPIAQEIQAKYLGESIMKSQDILENCS 282
           +L  + I  I C    L +    L+   +     P    I      E  + +++ +   +
Sbjct: 281 SLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFV---N 337

Query: 283 GLFESQPINIFRNLLTMSIDLDLNYIREALALSFVLRSCHCLESLDITIPVKKGSDTSDD 342
            ++E   +   R +L +       + R+ L L  + +  +     + +   K   D +  
Sbjct: 338 TIYE---VERLRQVLGL-------WTRKILELEIIFKDNNGPREENKSWDKKLWEDNNKK 387

Query: 343 GALPFPKSMFWERRNCVNHKLKFVTVRGFTGKELEGKFVEHLIARAVMVKKITIICNFSI 402
              PFP + F         ++  V +  F+G E E   +  LI +  +V+K+ I      
Sbjct: 388 D--PFPNAKF---------RVDTVWMYNFSGSEEEFALMTCLIRQGTVVEKMMI------ 430

Query: 403 VEEARKLLSQRRLSVYLSIILKSRRQIKLT 432
             +     +++RL +  ++      Q KLT
Sbjct: 431 --KTSTFPARKRLKIEAAVAKLQALQTKLT 458


>AT3G60790.1 | Symbols:  | F-box family protein |
           chr3:22464623-22466948 FORWARD LENGTH=488
          Length = 488

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 35/255 (13%)

Query: 2   ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRN----VHA 57
           IS+LPDE+L  I+S+LS  +AV TS LSK W   W+    L  D  R I R N    VH 
Sbjct: 52  ISMLPDEMLQKILSTLSTKDAVITSTLSKRWVDQWKRIPHLCVD-MRNIMRTNPTSYVHE 110

Query: 58  VR-KYGELVSTVLNRHLCDLTMCRFRYLSPSLNAEELAALVKFL------VERNKNLISL 110
           +  ++ E ++  LN H   L  C   ++           +  F+      V R K    +
Sbjct: 111 LSFRFAESMTKTLNNHRGHLESCTISHIQ---------FIFLFIDRWIQTVTREKQTKEI 161

Query: 111 TL----ECIKTRPYFPSVMLNFKSGIFSNLCSLELNNYLMRRVNASAFEGCXXXXXXXXX 166
           TL     C+     + S+ L+  +    +L SL L  Y   ++   AF+ C         
Sbjct: 162 TLVNNIGCMTPFVRYNSLHLSPSAFCHPSLTSLSLTRY---KLLEKAFKNCCNLKILKLY 218

Query: 167 XXIMEEQAVNDVLENCSSLERFILVESTGF----KKLKIRNPSLNFLELRW-LVVNEIDV 221
             + +   +++V++ CSSLE  +LV    F      LKI N  L FL++ W  ++N ++V
Sbjct: 219 DIMSDVSVLSNVIKACSSLE--VLVLQITFLNQASALKIENKKLEFLQVTWPCLMNRMEV 276

Query: 222 FVENLHEVVIDSILC 236
               L    I SI C
Sbjct: 277 NTPRLVIFDIKSIYC 291


>AT5G53840.1 | Symbols:  | F-box/RNI-like/FBD-like
          domains-containing protein | chr5:21859148-21860672
          REVERSE LENGTH=444
          Length = 444

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 9/65 (13%)

Query: 2  ISLLPDEILTYIISSLSVDEAVRTSILSKTWNPLWRNSSCLDFDGTRMIKRRNVHAVRKY 61
          +S LPD ++  I+S LS  +AVRTSILS  W  LW+    LDFD   +         R +
Sbjct: 20 LSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSREL---------RSF 70

Query: 62 GELVS 66
           E VS
Sbjct: 71 SEFVS 75