Miyakogusa Predicted Gene
- Lj0g3v0286399.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0286399.1 Non Chatacterized Hit- tr|I3SY60|I3SY60_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.22,0,seg,NULL;
CELL MOTILITY PROTEIN RELATED,NULL; ENGULFMENT AND CELL MOTILITY,NULL;
ELMO_CED12,Engulfme,CUFF.19107.1
(225 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03620.1 | Symbols: | ELMO/CED-12 family protein | chr1:9043... 333 5e-92
AT3G60260.4 | Symbols: | ELMO/CED-12 family protein | chr3:2227... 255 2e-68
AT3G60260.2 | Symbols: | ELMO/CED-12 family protein | chr3:2227... 255 2e-68
AT3G60260.1 | Symbols: | ELMO/CED-12 family protein | chr3:2227... 255 2e-68
AT3G60260.3 | Symbols: | ELMO/CED-12 family protein | chr3:2227... 254 4e-68
AT3G03610.1 | Symbols: | ELMO/CED-12 family protein | chr3:8694... 251 2e-67
AT2G44770.1 | Symbols: | ELMO/CED-12 family protein | chr2:1845... 251 3e-67
AT1G67400.1 | Symbols: | ELMO/CED-12 family protein | chr1:2524... 236 1e-62
AT3G43400.1 | Symbols: | ELMO/CED-12 family protein | chr3:1533... 171 3e-43
>AT1G03620.1 | Symbols: | ELMO/CED-12 family protein |
chr1:904319-906013 REVERSE LENGTH=265
Length = 265
Score = 333 bits (854), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 159/226 (70%), Positives = 183/226 (80%), Gaps = 2/226 (0%)
Query: 1 MVGPRSWIGGFFHRTSTKRSEKIVDYPLSSIXXXXXXXXXXXXXVPYDETCLDHQESLRA 60
MVG RSWIGG F R S +R +K VDY LS + VP+DET DHQESL+A
Sbjct: 33 MVGTRSWIGGLFTR-SNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDHQESLKA 91
Query: 61 LWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENLLYFARKYPASFHRLLL 120
LW+ AFPNV L L+++QWK+MGWQGPNPSTDFRGCG+I+LENLL+ AR YP F RLLL
Sbjct: 92 LWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVCFRRLLL 151
Query: 121 KKDGDRATWEYPFAVAGINISFMLIQMLDLYSE-KPRCLPGMNFVKLLGENEEAFDILYC 179
K+ GDRA WEYPFAVAGINISFMLIQMLDL + KP+CLPGMNF+KLL E+E AFD+LYC
Sbjct: 152 KQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERAFDVLYC 211
Query: 180 IAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQDL 225
IA+ MMDAQWLAMHASYM+FNEVLQ TR QLERELSL+DI++IQDL
Sbjct: 212 IAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDL 257
>AT3G60260.4 | Symbols: | ELMO/CED-12 family protein |
chr3:22274303-22276839 FORWARD LENGTH=266
Length = 266
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 144/181 (79%)
Query: 45 VPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENL 104
V YD + HQE+L+ LW AFP L ++SDQWK+MGWQG +PSTDFRG G+ISLENL
Sbjct: 78 VAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENL 137
Query: 105 LYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFV 164
LYFARK+P SFH LL K+ GDR+ WEYPFAVAGINI+FMLIQMLDL + KPR + G F+
Sbjct: 138 LYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFL 197
Query: 165 KLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQD 224
+ L NE AFD+LYCIA+++MD QWL+M ASYM+FN V+++TR QLERE+ +EDI ++D
Sbjct: 198 RFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLED 257
Query: 225 L 225
L
Sbjct: 258 L 258
>AT3G60260.2 | Symbols: | ELMO/CED-12 family protein |
chr3:22274303-22276839 FORWARD LENGTH=266
Length = 266
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 144/181 (79%)
Query: 45 VPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENL 104
V YD + HQE+L+ LW AFP L ++SDQWK+MGWQG +PSTDFRG G+ISLENL
Sbjct: 78 VAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENL 137
Query: 105 LYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFV 164
LYFARK+P SFH LL K+ GDR+ WEYPFAVAGINI+FMLIQMLDL + KPR + G F+
Sbjct: 138 LYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFL 197
Query: 165 KLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQD 224
+ L NE AFD+LYCIA+++MD QWL+M ASYM+FN V+++TR QLERE+ +EDI ++D
Sbjct: 198 RFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLED 257
Query: 225 L 225
L
Sbjct: 258 L 258
>AT3G60260.1 | Symbols: | ELMO/CED-12 family protein |
chr3:22274303-22276839 FORWARD LENGTH=266
Length = 266
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 144/181 (79%)
Query: 45 VPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENL 104
V YD + HQE+L+ LW AFP L ++SDQWK+MGWQG +PSTDFRG G+ISLENL
Sbjct: 78 VAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENL 137
Query: 105 LYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFV 164
LYFARK+P SFH LL K+ GDR+ WEYPFAVAGINI+FMLIQMLDL + KPR + G F+
Sbjct: 138 LYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFL 197
Query: 165 KLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQD 224
+ L NE AFD+LYCIA+++MD QWL+M ASYM+FN V+++TR QLERE+ +EDI ++D
Sbjct: 198 RFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLED 257
Query: 225 L 225
L
Sbjct: 258 L 258
>AT3G60260.3 | Symbols: | ELMO/CED-12 family protein |
chr3:22274645-22276839 FORWARD LENGTH=244
Length = 244
Score = 254 bits (648), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 144/181 (79%)
Query: 45 VPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENL 104
V YD + HQE+L+ LW AFP L ++SDQWK+MGWQG +PSTDFRG G+ISLENL
Sbjct: 56 VAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENL 115
Query: 105 LYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFV 164
LYFARK+P SFH LL K+ GDR+ WEYPFAVAGINI+FMLIQMLDL + KPR + G F+
Sbjct: 116 LYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFL 175
Query: 165 KLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQD 224
+ L NE AFD+LYCIA+++MD QWL+M ASYM+FN V+++TR QLERE+ +EDI ++D
Sbjct: 176 RFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLED 235
Query: 225 L 225
L
Sbjct: 236 L 236
>AT3G03610.1 | Symbols: | ELMO/CED-12 family protein |
chr3:869479-871687 FORWARD LENGTH=323
Length = 323
Score = 251 bits (642), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 151/204 (74%)
Query: 22 KIVDYPLSSIXXXXXXXXXXXXXVPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKD 81
+++ PLS + +P+D + ++HQ++LR LW A+P L L S+ WK+
Sbjct: 112 RLLPPPLSMLQEERLRNIKRRIEIPFDGSRMEHQDALRQLWRLAYPQRELPPLKSELWKE 171
Query: 82 MGWQGPNPSTDFRGCGYISLENLLYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINIS 141
MGWQG +PSTDFRG GYISLENL++FA+ YP SF RLL K+DG RA WEYPFAVAGINIS
Sbjct: 172 MGWQGTDPSTDFRGGGYISLENLIFFAKTYPESFQRLLHKQDGTRAEWEYPFAVAGINIS 231
Query: 142 FMLIQMLDLYSEKPRCLPGMNFVKLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNE 201
FML QMLDL S KP + G+ F+ L E+E AFD LYCIA++MMDAQWLA ASYM+FN+
Sbjct: 232 FMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMAFDNLYCIAFQMMDAQWLARRASYMEFND 291
Query: 202 VLQTTRMQLERELSLEDINKIQDL 225
VL++TR QLEREL+L+D++ I DL
Sbjct: 292 VLKSTRAQLERELALDDVSSITDL 315
>AT2G44770.1 | Symbols: | ELMO/CED-12 family protein |
chr2:18457817-18459886 FORWARD LENGTH=266
Length = 266
Score = 251 bits (641), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 142/181 (78%)
Query: 45 VPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENL 104
V YD T HQE+LR LW +FP L LIS+QWK+MGWQG +PSTDFRG G+ISLENL
Sbjct: 78 VAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
Query: 105 LYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFV 164
LYFAR + SF LL K+ GDR+ WEYPFAVAGIN++FMLIQMLDL + KPR + G F+
Sbjct: 138 LYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFL 197
Query: 165 KLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQD 224
K L ENE AFD+LYCIA+++MD QWL+M ASYM+FN V+++TR QLEREL LEDI ++D
Sbjct: 198 KFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLERELMLEDIMHLED 257
Query: 225 L 225
L
Sbjct: 258 L 258
>AT1G67400.1 | Symbols: | ELMO/CED-12 family protein |
chr1:25248099-25250664 REVERSE LENGTH=281
Length = 281
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 143/179 (79%)
Query: 47 YDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENLLY 106
YD + DHQ++LRALW +P+ L+ LISDQWK+MGWQG +PSTDFRG G+ISLENLL+
Sbjct: 96 YDASRPDHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLF 155
Query: 107 FARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFVKL 166
FA+ + SF RLL K+ G RA WEYPFAVAG+NI+FM++QMLDL + KPR + F+++
Sbjct: 156 FAKTFSTSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQM 215
Query: 167 LGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQDL 225
L E+E AFD+LYC+A+ +MD QWL +A+YM+FN+VL+ TR QLEREL ++D+ +I+D+
Sbjct: 216 LSESEWAFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDM 274
>AT3G43400.1 | Symbols: | ELMO/CED-12 family protein |
chr3:15332136-15333703 FORWARD LENGTH=213
Length = 213
Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 108/140 (77%), Gaps = 4/140 (2%)
Query: 65 AFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENLLYFARKYPASFHRLLLKKDG 124
+ + L+ LISDQWK+MGWQ +PSTDFRG G+ISLENL +FA+ +F RLL K+ G
Sbjct: 72 TYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENLRFFAK----TFSRLLKKQGG 127
Query: 125 DRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFVKLLGENEEAFDILYCIAYEM 184
RA WEYPFAVAG+NI+FM++QMLDL + KPR + F+++L E+E AF +LYC+A+ +
Sbjct: 128 KRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFGLLYCVAFVV 187
Query: 185 MDAQWLAMHASYMDFNEVLQ 204
MD QWL +A+YM+FN+VL+
Sbjct: 188 MDKQWLDKNATYMEFNDVLR 207