Miyakogusa Predicted Gene
- Lj0g3v0285979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285979.1 tr|C9E9Y2|C9E9Y2_PEA
Calcium-regulated/ATP-independent forisome protein OS=Pisum sativum
PE=2 SV=1,74.4,0,seg,NULL; coiled-coil,NULL,CUFF.19125.1
(668 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01680.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator c... 159 9e-39
AT3G01670.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 119 6e-27
AT1G67790.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 52 1e-06
>AT3G01680.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator
complex subunit Med28 (InterPro:IPR021640); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:252033-255246 FORWARD
LENGTH=740
Length = 740
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 163/629 (25%), Positives = 266/629 (42%), Gaps = 66/629 (10%)
Query: 88 ISCQMITTRNADHCVHQTTMWILQNLRSYSWDAKAIITLAAFTLEYGNYLHLSRAAVADT 147
++C++ H+ TM + ++L S+ WD K ++TLAAF L YG + L + +
Sbjct: 113 VACEIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQ 172
Query: 148 LGSSLRQL------NQVHTRKVPADITKLVTFIVHAFQHLKEWATWADEGYEPEEVPSLT 201
L SL L N+V V + L+ + + E + D P +VP L+
Sbjct: 173 LAKSLAMLKLVPVQNRVTLESVSQGLNDLIREMKSVTACVVELSELPDRYITP-DVPQLS 231
Query: 202 EALQHVPVAVYWTIAAIVASTGNL-----VGVSTYNLQGYI-------DRLDEHVTKLAE 249
L +P+AVYWTI +++A + +G N Q + ++L LAE
Sbjct: 232 RILSTIPIAVYWTIRSVIACISQINMITAMGHEMMNTQMDLWETSMLANKLKNIHDHLAE 291
Query: 250 QLNSCKLQIGHVDDYFNRR---KIFDKPK-DIVDLLKALIHRNGAQGPQIFEGGVIVKQG 305
L C I + + +FD D + +L AL+H P + +G K
Sbjct: 292 TLRLCYRHIEKQRSSESLKVLHSLFDTTHIDNMKILTALVHPKPHITP-LQDGLTKRKVH 350
Query: 306 LEVFRQKHVLLFISGLNSIVDEILLLNSIYNRLQDNPTEVIKGFKKEDFKILWVPMVDRW 365
L+V R+K VLL IS LN + DE+ + IY + N V G ++++WVP+VD
Sbjct: 351 LDVLRRKTVLLLISDLNILQDELSIFEQIYTESRRNLVGV-DGKSHMPYEVVWVPVVDPI 409
Query: 366 DEASREQYLNT----WKRGIKWYIVEYFFELPGRRIITDPE-RLGYEGNPIIPVFNPQGM 420
++ R L + + WY V+ +L R ++ R + PI+ V +PQG
Sbjct: 410 EDFERSPILQKKFEDLRDPMPWYSVDS-PKLIERHVVEFMRGRWHFMNKPILVVIDPQGN 468
Query: 421 LTNDNAMDLIFQWGIDAFPFRKSDGXXXXXXXXXXXXXXXXATPGL---QVKVDRYIFIF 477
+ NA+ +I+ WG +AFPF +S + +K D YIF++
Sbjct: 469 EASLNALHMIWIWGTEAFPFTRSREEELWRRETFSLNLIVDGIDSVIFNWIKPDNYIFLY 528
Query: 478 GSTNNKWIQDFTIELDKL--------------KRN----ETVKRADVIIEQYQLGKD--D 517
G + WI+ FT+ KRN E ++R +I L +
Sbjct: 529 GGDDLDWIRRFTMAAKATAKDSNVNLEMAYVGKRNHSHREQIRRISEVIRSENLSHSWAE 588
Query: 518 PNRVPSFWMGVERKKQNKKHQEAVDCE---IQGIVKSLFCLKRDPQGWVILSKGHNIKLL 574
P + FW +E +K D +QGI K L K GW +LSKG I ++
Sbjct: 589 PALMWFFWTRLESMLYSKIQLGKADDHDDVMQGIKKILSYDKLG--GWALLSKGPEIVMI 646
Query: 575 GHGEAVYQTVVEFPNWKEKVLEREGFDIAFKEYYDIKAKEISARQPCEIIN--VDSYSAN 632
HG V WK V +G+ A +++ + + + PC + + + S
Sbjct: 647 AHGAIERTMSVYDRTWKTHV-PTKGYTKAMSDHHHDEVLRETGK-PCGHFDFHITARSGR 704
Query: 633 VIATITCPNPMCGRVMEVTSVNYKCCHSD 661
+ + C C R ME +++ CCH +
Sbjct: 705 IPEKMNCFE--CQRPME-KYMSFSCCHDE 730
>AT3G01670.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:247288-250261 FORWARD
LENGTH=822
Length = 822
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 171/761 (22%), Positives = 297/761 (39%), Gaps = 147/761 (19%)
Query: 2 SHVPKAASNGALIQHSGTSPNQKAYLPSP--FELKDPQIL-DRVYLTHVNDDEICDTKIL 58
S VPK+ +L G Q + F L D +++ DRV TH D D L
Sbjct: 103 SMVPKSLGPNSLGGRFGPGKKQAFHRNGRPMFSLSDDRVMADRVLKTHSPDMIFFDVTSL 162
Query: 59 FDXXXXXXXXXXXXIPATSFKPE-----------FST----LKLISCQ------------ 91
I +++ KP F T + ISC+
Sbjct: 163 LSVVNDIFKSHVPSIDSSAPKPSLVFKDYADHTSFETFADLIDQISCEIDCKCLHGGESH 222
Query: 92 -MITTRNADHCVHQTTMWILQNLRSYSWDAKAIITLAAFTLEYGNYLHLSRAAVADTLGS 150
M+T+ + TT +L + Y WDAK ++ L+A ++YG +L L+ + L
Sbjct: 223 GMMTSGLHLDSRNTTTFSVLSLVSKYRWDAKLVLVLSALAVKYGVFLLLAETHATNQLTK 282
Query: 151 SL---RQL-------NQVH-----TRKVPADITKLVTFIVHAFQHLKEWATWADEGYEPE 195
SL +QL N +H TR + D+ L T I+ +Q P
Sbjct: 283 SLALIKQLPSIFSRQNALHQRLDKTRILMQDMVDLTTTIIDIYQ------------LPPN 330
Query: 196 EVPSLTEAL-QHVPVAVYWTIAAIVASTGNLVGVSTYNLQGYIDRLDEHVTKLAEQLNSC 254
+ T A H+P AVYW + ++ ++ G S + + ++ V+++ E
Sbjct: 331 HI---TAAFTDHIPTAVYWIVRCVLICVSHISGASGFKQDQIMSFME--VSEIHENSERL 385
Query: 255 KLQIGHVDDYFNRRKIFDKP-------KDIVDLLKALIH--------RNGAQGPQIFEGG 299
+ ++ + F + K+ + ++++ +IH R ++ G
Sbjct: 386 RKINAYLLEQFKKSKMTIEEGIIEEEYQELIQTFTTIIHVDVVPPLLRLLRPIDFLYHGA 445
Query: 300 VIVKQ--GLEVFRQKHVLLFISGLNSIVDEILLLNSIYNRLQDNPTEVIKGFKKEDFKIL 357
+ K+ G+ V QKHVLL IS L +I E+ +L S+Y TE ++ F+IL
Sbjct: 446 GVSKRRVGINVLTQKHVLLLISDLENIEKELYILESLY-------TEAW----QQSFEIL 494
Query: 358 WVPMVDRWDEASREQYLNTWKRGIKWYIVEYFFELPGRRIITDPERLGYEGNPIIPVFNP 417
WVP+ D W EA ++ ++WY++ +L I E G++ PI+ +P
Sbjct: 495 WVPVQDFWTEADDAKF-EALHMNMRWYVLGEPRKLRRAAIRFVREWWGFKNRPILVALDP 553
Query: 418 QGMLTNDNAMDLIFQWGIDAFPFRKSDGXXXXXXXXXXXXXXXXATP--GLQVKVD-RYI 474
+G + + NA +++ W A PF + T L VD +YI
Sbjct: 554 KGQVMSTNAFPMVWIWQPFAHPFTTARERDLWSEQEWNLEFLIDGTDPHSLNQLVDGKYI 613
Query: 475 FIFGSTNNKWIQDFTIELDKLKRNETVKRADVIIEQYQLGKDDP---------------- 518
++G + +WI++FT L RN K A++ +E +GK +P
Sbjct: 614 CLYGGEDMQWIKNFT----SLWRN-VAKAANIQLEMVYVGKRNPKNGIQPIINTIREENL 668
Query: 519 --------------NRVPSFWMGVER-------KKQNKKHQEAVDCEIQGIVKSLFCLKR 557
RV S W +R K + +E D +Q +V ++
Sbjct: 669 SHTLPDLFQIWFFWTRVESMWESKQRMLKAHGIKGREGFKEEEKDLVLQEVV-AMLGYGG 727
Query: 558 DPQGWVILSKGHNIKLLGHGEAVYQTVVEFPNWKEKVLEREGFDIAFKEYYDIKAKEISA 617
+ GW ++SK ++ + G + + EF W E + +GF A ++ ++
Sbjct: 728 EGDGWGLVSKASDMMVRAKGNLFSRGLAEFNEW-EVNIPTKGFLTALNDHLLMRLPP--- 783
Query: 618 RQPCEIINVDSYSANVIATITCPNPMCGRVMEVTSVNYKCC 658
C + + + + C C R ME + Y+CC
Sbjct: 784 -HHCTRFMLPETAGIIPNEVECTE--CRRTMEKYYL-YQCC 820
>AT1G67790.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr1:25417542-25420099 REVERSE
LENGTH=576
Length = 576
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 140/366 (38%), Gaps = 65/366 (17%)
Query: 311 QKHVLLFISGLNSIVDEILLLNSIYNRLQDNPTEVIKGFKKEDFKILWVPM--VDRWDEA 368
Q V L + + LL +Y+ + TE ++++I+WVP+ +W +
Sbjct: 236 QDKVTLLLLSKPPVEPLFFLLQQLYDHPSNTNTE-------QNYEIIWVPIPSSQKWTDE 288
Query: 369 SREQYLNTWKRGIKWYIVEYFFELPGRRIITDPERLGYEGN-PIIPVFNPQGMLTNDNAM 427
+E + + + + W V + + + + Y+ N ++ V + G N NAM
Sbjct: 289 EKEIF-DFYSNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLVVIDSNGRFVNMNAM 347
Query: 428 DLIFQWGIDAFPFRKS-DGXXXXXXXXXXXXXXXXATPGLQVKVDRYIFIFGSTNNKWIQ 486
D++ WG+ A+PF S + P + R I IFGS N WI
Sbjct: 348 DMVLIWGVKAYPFSVSREDELWKEHGWSINLLLDGIHPTFE---GREICIFGSENLDWID 404
Query: 487 DFT---------------IELDKLKRNETVKRADVIIEQYQLGKDDPNRVPSFWMGVERK 531
+F I L +R+E I+ P FW+ +E
Sbjct: 405 EFVSLARKIQNLGFQLELIYLSNQRRDERAMEESSIL-------FSPTLQQLFWLRLESI 457
Query: 532 KQNKKHQEAVDC--------EIQGIVKSLFCLKRDPQGWVILSKGHNIKLLGHGEAVYQT 583
+++K + ++ E++ ++ + R GW I+ G + + GE + +
Sbjct: 458 ERSKLKRIVIEPSKPDRVFEEVRNLLDFDYGKHR---GWGIIGNGSTAETVD-GEKMTER 513
Query: 584 VVEFPNWKEKVLEREGFDIAFKEYYDIKAKEISARQPCEIINV------DSYSANVIATI 637
+ + W E + F E A EI+A +PCE+ + ++ + V+
Sbjct: 514 MRKIVRWGEY-----AKGLGFTE-----AIEIAAEKPCELSHTAVVPFEEALTMKVVTCE 563
Query: 638 TCPNPM 643
C PM
Sbjct: 564 KCKWPM 569