Miyakogusa Predicted Gene

Lj0g3v0285839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0285839.1 Non Chatacterized Hit- tr|I3S6M1|I3S6M1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,62.57,0,K-box,Transcription factor, K-box; MADS BOX PROTEIN,NULL;
seg,NULL; coiled-coil,NULL; K_BOX,Transcri,CUFF.19066.1
         (169 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45660.1 | Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 | c...    94   4e-20
AT5G62165.3 | Symbols: AGL42 | AGAMOUS-like 42 | chr5:24965075-2...    80   9e-16
AT5G62165.2 | Symbols: AGL42 | AGAMOUS-like 42 | chr5:24965075-2...    80   9e-16
AT5G62165.1 | Symbols: AGL42 | AGAMOUS-like 42 | chr5:24965075-2...    80   9e-16
AT5G62165.4 | Symbols: AGL42 | AGAMOUS-like 42 | chr5:24965075-2...    72   2e-13
AT5G51870.3 | Symbols: AGL71 | AGAMOUS-like 71 | chr5:21085635-2...    62   3e-10
AT5G51870.1 | Symbols: AGL71 | AGAMOUS-like 71 | chr5:21085635-2...    61   3e-10
AT5G51860.2 | Symbols:  | K-box region and MADS-box transcriptio...    60   6e-10
AT5G51860.1 | Symbols:  | K-box region and MADS-box transcriptio...    57   4e-09
AT5G51870.2 | Symbols: AGL71 | AGAMOUS-like 71 | chr5:21086162-2...    54   4e-08
AT4G22950.1 | Symbols: AGL19, GL19 | AGAMOUS-like 19 | chr4:1202...    54   6e-08

>AT2G45660.1 | Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 |
           chr2:18807799-18810193 REVERSE LENGTH=214
          Length = 214

 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 1   MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
           M ++I+RY +HT++ V T   S E+NMQHLK EA  MMKKI+ LE +KRKL GEG+G+CS
Sbjct: 62  MQDTIDRYLRHTKDRVSTKPVS-EENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 61  XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEP--P 118
                       +S++ +RARK+Q +               AEN +LSEK+G        
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVWS 180

Query: 119 TLDQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLP 157
             +Q +  R D                    T+LFIGLP
Sbjct: 181 NKNQESTGRGDEESSPSSEVE----------TQLFIGLP 209


>AT5G62165.3 | Symbols: AGL42 | AGAMOUS-like 42 |
           chr5:24965075-24968437 FORWARD LENGTH=210
          Length = 210

 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 18/160 (11%)

Query: 1   MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
           M ++IERYRK+T+++  + H S + ++Q LK+EA+ M+ KI++LE  KRKL G+G+ SCS
Sbjct: 62  MQKTIERYRKYTKDHETSNHDS-QIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 61  XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPE--PP 118
                       RS+  VR RK+Q +                EN +L +K  I P     
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSS 180

Query: 119 TLDQRAKPR-MDLHRXXXXXXXXXXXXXXDVETELFIGLP 157
           T  Q+ K + +DL+               +VET+LFIGLP
Sbjct: 181 TDQQQEKYKVIDLN--------------LEVETDLFIGLP 206


>AT5G62165.2 | Symbols: AGL42 | AGAMOUS-like 42 |
           chr5:24965075-24968437 FORWARD LENGTH=210
          Length = 210

 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 18/160 (11%)

Query: 1   MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
           M ++IERYRK+T+++  + H S + ++Q LK+EA+ M+ KI++LE  KRKL G+G+ SCS
Sbjct: 62  MQKTIERYRKYTKDHETSNHDS-QIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 61  XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPE--PP 118
                       RS+  VR RK+Q +                EN +L +K  I P     
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSS 180

Query: 119 TLDQRAKPR-MDLHRXXXXXXXXXXXXXXDVETELFIGLP 157
           T  Q+ K + +DL+               +VET+LFIGLP
Sbjct: 181 TDQQQEKYKVIDLN--------------LEVETDLFIGLP 206


>AT5G62165.1 | Symbols: AGL42 | AGAMOUS-like 42 |
           chr5:24965075-24968437 FORWARD LENGTH=210
          Length = 210

 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 18/160 (11%)

Query: 1   MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
           M ++IERYRK+T+++  + H S + ++Q LK+EA+ M+ KI++LE  KRKL G+G+ SCS
Sbjct: 62  MQKTIERYRKYTKDHETSNHDS-QIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 61  XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPE--PP 118
                       RS+  VR RK+Q +                EN +L +K  I P     
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSS 180

Query: 119 TLDQRAKPR-MDLHRXXXXXXXXXXXXXXDVETELFIGLP 157
           T  Q+ K + +DL+               +VET+LFIGLP
Sbjct: 181 TDQQQEKYKVIDLN--------------LEVETDLFIGLP 206


>AT5G62165.4 | Symbols: AGL42 | AGAMOUS-like 42 |
           chr5:24965075-24968437 FORWARD LENGTH=196
          Length = 196

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 32/160 (20%)

Query: 1   MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
           M ++IERYRK+T+++  + H S + ++Q LK+EA+ M+ KI++LE  KRKL G+G+ SCS
Sbjct: 62  MQKTIERYRKYTKDHETSNHDS-QIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 61  XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPE--PP 118
                       RS+  VR RK +  +               EN +L +K  I P     
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKEKQLL--------------EENVKLHQKNVINPWRGSS 166

Query: 119 TLDQRAKPR-MDLHRXXXXXXXXXXXXXXDVETELFIGLP 157
           T  Q+ K + +DL+               +VET+LFIGLP
Sbjct: 167 TDQQQEKYKVIDLN--------------LEVETDLFIGLP 192


>AT5G51870.3 | Symbols: AGL71 | AGAMOUS-like 71 |
           chr5:21085635-21087923 REVERSE LENGTH=219
          Length = 219

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 72/163 (44%), Gaps = 15/163 (9%)

Query: 5   IERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXXX 64
           I+RY K +          VE+ +Q LK E   M+KKID+LE   RKL G+GL SCS    
Sbjct: 66  IDRYGKFSNAFYVAERPQVERYLQELKMEIDRMVKKIDLLEVHHRKLLGQGLDSCSVTEL 125

Query: 65  XXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYG----IGP-EPPT 119
                   +S+R VR+RK++ Y                E  RL E+      + P  P T
Sbjct: 126 QEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRLLEEQNRERLMRPVVPAT 185

Query: 120 LDQRAKPRMD-LHRXXXXXXXXXXXXXXDVETELFIGLPEARI 161
           L    K   +  HR              +VET+LFIGLP  R+
Sbjct: 186 LQICDKGNTEGGHR---------TKHSSEVETDLFIGLPVTRL 219


>AT5G51870.1 | Symbols: AGL71 | AGAMOUS-like 71 |
           chr5:21085635-21087923 REVERSE LENGTH=207
          Length = 207

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 67/157 (42%), Gaps = 15/157 (9%)

Query: 5   IERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXXX 64
           I+RY K +          VE+ +Q LK E   M+KKID+LE   RKL G+GL SCS    
Sbjct: 66  IDRYGKFSNAFYVAERPQVERYLQELKMEIDRMVKKIDLLEVHHRKLLGQGLDSCSVTEL 125

Query: 65  XXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTLDQRA 124
                   +S+R VR+RK++ Y                E  RL E+  +        +  
Sbjct: 126 QEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRLLEEVNMHHSSKGNTEGG 185

Query: 125 KPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARI 161
                 HR              +VET+LFIGLP  R+
Sbjct: 186 ------HR---------TKHSSEVETDLFIGLPVTRL 207


>AT5G51860.2 | Symbols:  | K-box region and MADS-box transcription
           factor family protein  | chr5:21081844-21084126 REVERSE
           LENGTH=202
          Length = 202

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 20/157 (12%)

Query: 4   SIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXX 63
           +I+RY ++ R         +EQ +Q LK+E   M+KKI++LE   RK+ G+ L SCS   
Sbjct: 65  TIKRYAEYKREYFVAETHPIEQYVQGLKKEMVTMVKKIEVLEVHNRKMMGQSLDSCSVKE 124

Query: 64  XXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTLDQR 123
                    +S+  VR RK++ Y                E  RLS K  +G  P  +   
Sbjct: 125 LSEIATQIEKSLHMVRLRKAKLYEDELQKLKAKERELKDERVRLSLK--VGERPMGMPSG 182

Query: 124 AKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEAR 160
           +K +                   DVET+LFIG  + R
Sbjct: 183 SKEK------------------EDVETDLFIGFLKNR 201


>AT5G51860.1 | Symbols:  | K-box region and MADS-box transcription
           factor family protein  | chr5:21081844-21084126 REVERSE
           LENGTH=211
          Length = 211

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 25/164 (15%)

Query: 4   SIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXX 63
           +I+RY ++ R         +EQ +Q LK+E   M+KKI++LE   RK+ G+ L SCS   
Sbjct: 65  TIKRYAEYKREYFVAETHPIEQYVQGLKKEMVTMVKKIEVLEVHNRKMMGQSLDSCSVKE 124

Query: 64  XXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGI-------GPE 116
                    +S+  VR RK++ Y                E  RLS K  I       G  
Sbjct: 125 LSEIATQIEKSLHMVRLRKAKLYEDELQKLKAKERELKDERVRLSLKKTIYTHLCQVGER 184

Query: 117 PPTLDQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEAR 160
           P  +   +K +                   DVET+LFIG  + R
Sbjct: 185 PMGMPSGSKEK------------------EDVETDLFIGFLKNR 210


>AT5G51870.2 | Symbols: AGL71 | AGAMOUS-like 71 |
           chr5:21086162-21087923 REVERSE LENGTH=172
          Length = 172

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 43/81 (53%)

Query: 5   IERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXXX 64
           I+RY K +          VE+ +Q LK E   M+KKID+LE   RKL G+GL SCS    
Sbjct: 66  IDRYGKFSNAFYVAERPQVERYLQELKMEIDRMVKKIDLLEVHHRKLLGQGLDSCSVTEL 125

Query: 65  XXXXXXXXRSIRSVRARKSQA 85
                   +S+R VR+RK Q 
Sbjct: 126 QEIDTQIEKSLRIVRSRKVQT 146


>AT4G22950.1 | Symbols: AGL19, GL19 | AGAMOUS-like 19 |
           chr4:12023946-12027421 REVERSE LENGTH=219
          Length = 219

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 29/175 (16%)

Query: 4   SIERYRK--------HTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEG 55
           +IERY++        H RN+          N Q  ++E + + KKI+ LE +KRKL GEG
Sbjct: 65  TIERYQRRIKEIGNNHKRND----------NSQQARDETSGLTKKIEQLEISKRKLLGEG 114

Query: 56  LGSCSXXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKY-GIG 114
           + +CS            RS+  +RA+K Q                  EN  L EK+ G+G
Sbjct: 115 IDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMG 174

Query: 115 PEPPTLDQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARIRRISPKLN 169
                  Q      +++               +VET LFIG PE R  +  P  N
Sbjct: 175 TATIASSQSTLSSSEVN----------IDDNMEVETGLFIGPPETRQSKKFPPQN 219