Miyakogusa Predicted Gene
- Lj0g3v0285649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285649.1 Non Chatacterized Hit- tr|I1JMN6|I1JMN6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,79.79,0,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide,CUFF.19062.1
(668 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 526 e-149
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 526 e-149
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 521 e-148
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 507 e-143
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 500 e-141
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 489 e-138
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 486 e-137
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 485 e-137
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 478 e-135
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 472 e-133
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 469 e-132
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 468 e-132
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 464 e-131
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 454 e-128
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 451 e-127
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 451 e-126
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 448 e-126
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 444 e-124
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-123
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 440 e-123
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 438 e-123
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-122
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 431 e-121
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 429 e-120
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 425 e-119
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-118
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 421 e-117
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 416 e-116
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 415 e-116
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-116
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 412 e-115
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 406 e-113
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 403 e-112
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 400 e-111
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 371 e-102
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 8e-99
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 356 3e-98
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 4e-97
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 350 2e-96
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 8e-96
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 345 5e-95
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 7e-95
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 343 2e-94
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 342 4e-94
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 9e-94
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 323 3e-88
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 7e-87
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 318 9e-87
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 4e-86
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 8e-86
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 312 4e-85
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 308 7e-84
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 7e-84
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 306 4e-83
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 303 2e-82
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 3e-82
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 297 2e-80
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 2e-75
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 4e-75
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 276 4e-74
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 275 7e-74
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 9e-73
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 8e-72
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 256 3e-68
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 7e-67
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 241 1e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 5e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 211 1e-54
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 4e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 7e-41
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 113 4e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 2e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 7e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 88 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 86 6e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 1e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 85 2e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 82 1e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 81 3e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 4e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 78 2e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 4e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 77 5e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 73 7e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 63 9e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 1e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 61 2e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 3e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 6e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 7e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 53 7e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 51 3e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 3e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/682 (38%), Positives = 414/682 (60%), Gaps = 37/682 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ +D+FV N+++ Y E G L+ AR++FD+M +++ VSW++MI Y R +A+DL
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 81 -RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDM 138
R +R V P+ + M+ +I A+L DL+ G+ ++ ++ RN G + + ++L+DM
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI---RNSGIEVNDLMVSALVDM 280
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y+KC + A+ +FD + +++ M + Y+ E + +F M GV P+ I++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
LS + C + + +GK H + LRNG + A IDMY KC +A +FD + N
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMND--------------------------CGI 292
K ++ +++++ Y + +D ++ F M + C +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 293 RPNE------ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
+ E +TM+S+ C G+L++ KWI+ YI+K GI+ D +L T+LVDM+++CGD
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
++ +F + T+RD+ W I AM G+ E A+ELF +M QG+ P+ + F+GAL A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
CSH GL+Q+GK +F+ M+ G+ P+ HYGCMVDLL RAGLL+EA +LI DMPM PN+V
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMR 526
+ SLLAAC++ NV++ +AA + L + G VL+SN+YA+ +W D++ +R +M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 527 DAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLM 586
+ G+ K PG SSI++ G HEF GD HPE I ++ E+ ++ ++G+ PD+S VLM
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM 760
Query: 587 NIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREI 646
++D +EK L+ HSEKLAMAYGLIS G IRIVKNLRVC D H+ S++Y REI
Sbjct: 761 DVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREI 820
Query: 647 IVRDRNRFHHFKEGSCSCHDYW 668
I+RD NRFH+ ++G CSC D+W
Sbjct: 821 ILRDNNRFHYIRQGKCSCGDFW 842
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 230/485 (47%), Gaps = 40/485 (8%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVG---SLEFARQLFDKMVD-KDAVSWSTMIRNYGRN 70
R + G DV ++ E+G SL FA+++F+ ++++IR Y +
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 71 GLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
GL +EA+ L M + + P + + A+ G +HG +++ +
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD--LF 170
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM-RRE 189
+ SL+ Y +C L AR VFD S ++VSWT+MI GY + + + LF +M R E
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
V PN +T++ ++ C +E LE G+ ++AF +GI ++ ++ +A +DMY KC A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
+ +FD +L +C+AM S Y + E +F M D G+RP+ I+M+S + C++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC------------------------- 344
++ GK H Y+ + G + + +L+DMY KC
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 345 ------GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ-GVIPND 397
G++D + F +++I+ WN +ISG E A+E+F M++Q GV +
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
+T + AC H G L K +++ + G+ V +VD+ SR G + A +
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 458 DMPMR 462
+ R
Sbjct: 530 SLTNR 534
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/666 (39%), Positives = 409/666 (61%), Gaps = 42/666 (6%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNY--GRNGLLD--EALDLLRDMRVARVKPSEIAM 95
SLE+AR++FD++ ++ +W+T+IR Y G + +L LD++ + ++ P++
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE---SQCYPNKYTF 134
Query: 96 ISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGF 155
+I AE+ L LG++LHG M ++ S V ++ SLI Y C +L A VF
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHG--MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
+VSW +MI G++ + ++ + LF KM E V + +T++ ++ C + LEFG+
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCG------------------------------- 244
+ ++ N + +++ LA A +DMY KCG
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 245 DFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN-DCGIRPNEITMVSLL 303
D+ +AR V +S+ KD++ +A+ISAY Q +E +F ++ ++ N+IT+VS L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 304 VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL 363
CA+ G+LE+G+WIHSYI K GI+ + + ++L+ MY+KCGD++ + +F + RD+
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
+W+ MI G AM G G A+++F +M+ V PN +TF ACSH+GL+ E + LFH+M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKL 483
++G+VP+ +HY C+VD+L R+G L++A K I MP+ P+ V G+LL ACK+H N+ L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 484 GEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG 543
E A + L LE G +VL+SNIYA KW +VS++R+ MR G+ KEPG SSIE++G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 544 SVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEE-KETALNYHSE 602
+HEF+ GD HP + ++Y + E+ EKL + GY P+IS VL I+ EE KE +LN HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672
Query: 603 KLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSC 662
KLA+ YGLIS IR++KNLRVC D H+ L+S++Y REIIVRDR RFHHF+ G C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 663 SCHDYW 668
SC+D+W
Sbjct: 733 SCNDFW 738
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 198/405 (48%), Gaps = 39/405 (9%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DVFV N++I Y G L+ A ++F + +KD VSW++MI + + G D+AL+L + M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
VK S + M+ ++ A++ +L+ G+ + Y+ NR + L+ +++DMY KC +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR--VNVNLTLANAMLDMYTKCGS 282
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI------------ 192
+ A+ +FD V+WTTM+ GY + + + M ++ ++
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 193 --PNE------------------ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
PNE IT++S + C V ALE G+ +H++ ++GI ++ +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
+A I MY KCGD +R VF+S+E +D+ + SAMI A C +E D+F +M + +
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV 462
Query: 293 RPNEITMVSLLVLCAKAGSL-EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
+PN +T ++ C+ G + E H GI + K +VD+ + G ++
Sbjct: 463 KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 352 RLFAA-ATDRDILMWNVMISGC---AMLGDGEAALELFVEMEAQG 392
+ A +W ++ C A L E A +E+E +
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 208/459 (45%), Gaps = 45/459 (9%)
Query: 99 IHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA---YARSVFDGF 155
I + V L+ K HG+++R G P S S + + A YAR VFD
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRT---GTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG-VIPNEITILSLVKECGTVEALEFG 214
+ +W T+I Y + I F+ M E PN+ T L+K V +L G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+ LH +++ + V +A + I Y CGD SA VF +I+ KD++ ++MI+ + Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
D+ ++F +M ++ + +TMV +L CAK +LE G+ + SYI++ + + L
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+++DMY KCG I+ RLF A ++D + W M+ G A+ D EAA E+ M + ++
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 395 --------------PND------------------ITFIGALKACSHSGLLQEGKRLFHK 422
PN+ IT + L AC+ G L+ G R H
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHS 389
Query: 423 MVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK 482
+ G+ ++ + S+ G L++++++ + R + V +++ +H
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMH---G 445
Query: 483 LGEWAAGQFLSLESHKCGYN-VLMSNIYAAENKWGDVSD 520
G A F ++ N V +N++ A + G V +
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 39/266 (14%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM--------------- 63
EN + ++ + NA++ MY + GS+E A++LFD M +KD V+W+TM
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 64 ----------------IRNYGRNGLLDEALDLLRDMRVAR-VKPSEIAMISIIHVFAELV 106
I Y +NG +EAL + ++++ + +K ++I ++S + A++
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
L+LG+ +H Y+ ++ + ++++LI MY KC +L +R VF+ + W+ M
Sbjct: 380 ALELGRWIHSYI--KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC---GTVEALEFGKLLHAFTLR 223
I G NE + +F KM+ V PN +T ++ C G V+ E L H
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE--SLFHQMESN 495
Query: 224 NGITISVVLATAFIDMYGKCGDFRSA 249
GI +D+ G+ G A
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKA 521
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/681 (38%), Positives = 413/681 (60%), Gaps = 37/681 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ +D+FV N+++ Y E G L+ AR++FD+M +++ VSW++MI Y R +A+DL
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 81 -RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDM 138
R +R V P+ + M+ +I A+L DL+ G+ ++ ++ RN G + + ++L+DM
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI---RNSGIEVNDLMVSALVDM 280
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y+KC + A+ +FD + +++ M + Y+ E + +F M GV P+ I++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
LS + C + + +GK H + LRNG + A IDMY KC +A +FD + N
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMND--------------------------CGI 292
K ++ +++++ Y + +D ++ F M + C +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 293 RPNE------ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
+ E +TM+S+ C G+L++ KWI+ YI+K GI+ D +L T+LVDM+++CGD
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
++ +F + T+RD+ W I AM G+ E A+ELF +M QG+ P+ + F+GAL A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
CSH GL+Q+GK +F+ M+ G+ P+ HYGCMVDLL RAGLL+EA +LI DMPM PN+V
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMR 526
+ SLLAAC++ NV++ +AA + L + G VL+SN+YA+ +W D++ +R +M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 527 DAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLM 586
+ G+ K PG SSI++ G HEF GD HPE I ++ E+ ++ ++G+ PD+S VLM
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM 760
Query: 587 NIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREI 646
++D +EK L+ HSEKLAMAYGLIS G IRIVKNLRVC D H+ S++Y REI
Sbjct: 761 DVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREI 820
Query: 647 IVRDRNRFHHFKEGSCSCHDY 667
I+RD NRFH+ ++G CSC D+
Sbjct: 821 ILRDNNRFHYIRQGKCSCGDF 841
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 230/485 (47%), Gaps = 40/485 (8%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVG---SLEFARQLFDKMVD-KDAVSWSTMIRNYGRN 70
R + G DV ++ E+G SL FA+++F+ ++++IR Y +
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 71 GLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
GL +EA+ L M + + P + + A+ G +HG +++ +
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD--LF 170
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM-RRE 189
+ SL+ Y +C L AR VFD S ++VSWT+MI GY + + + LF +M R E
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
V PN +T++ ++ C +E LE G+ ++AF +GI ++ ++ +A +DMY KC A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
+ +FD +L +C+AM S Y + E +F M D G+RP+ I+M+S + C++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC------------------------- 344
++ GK H Y+ + G + + +L+DMY KC
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 345 ------GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ-GVIPND 397
G++D + F +++I+ WN +ISG E A+E+F M++Q GV +
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
+T + AC H G L K +++ + G+ V +VD+ SR G + A +
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 458 DMPMR 462
+ R
Sbjct: 530 SLTNR 534
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/650 (38%), Positives = 389/650 (59%), Gaps = 3/650 (0%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++GF D+F + MY + + AR++FD+M ++D VSW+T++ Y +NG+ AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+++ M +KPS I ++S++ + L + +GK +HGY MR+ S V +ST+L+DM
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG--FDSLVNISTALVDM 280
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC +L AR +FDG ++VSW +MI Y+ N E + +F KM EGV P ++++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+ + C + LE G+ +H ++ G+ +V + + I MY KC + +A +F +++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+ L+ +AMI +AQ + + F QM ++P+ T VS++ A+ KWI
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + + + ++ + T+LVDMYAKCG I +F ++R + WN MI G G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+AALELF EM+ + PN +TF+ + ACSHSGL++ G + F+ M ++ + ++HYG
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MVDLL RAG L+EA I+ MP++P V G++L AC++HKNV E AA + L
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
GY+VL++NIY A + W V +R +M G+ K PG S +E+ VH F G HP++
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 559 RRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAP 618
++IY + ++ + GY PD + VL ++ + KE L+ HSEKLA+++GL++ G
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 759
Query: 619 IRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
I + KNLRVC D HNAT +S + GREI+VRD RFHHFK G+CSC DYW
Sbjct: 760 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 231/445 (51%), Gaps = 12/445 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG +++ F ++ ++ GS++ A ++F+ + K V + TM++ + + LD+AL
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TS 134
MR V+P ++ V + +L++GK +HG +++ SG L T
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK------SGFSLDLFAMTG 175
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L +MY KC+ + AR VFD +VSW T++AGY + + M E + P+
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
ITI+S++ + + GK +H + +R+G V ++TA +DMY KCG +AR +FD
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ ++++ ++MI AY Q E IF +M D G++P +++++ L CA G LE
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G++IH + G+ R+ + SL+ MY KC ++DT +F R ++ WN MI G A
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G AL F +M ++ V P+ T++ + A + + K + H +V L V
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVF 474
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDM 459
+VD+ ++ G + A +LI DM
Sbjct: 475 VTTALVDMYAKCGAIMIA-RLIFDM 498
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 9/340 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ +GF V + A++ MY + GSLE ARQLFD M++++ VSW++MI Y +N E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLS 132
A+ + + M VKP++++++ +H A+L DL+ G+ +H + +RN V +
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN-----VSVV 375
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
SLI MY KCK + A S+F ++VSW MI G+ + + F +MR V
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P+ T +S++ + K +H +R+ + +V + TA +DMY KCG AR +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
FD + + + +AMI Y ++F +M I+PN +T +S++ C+ +G +
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 313 EMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
E G K + + I+ ++VD+ + G ++ +
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 5/343 (1%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
T L+ ++ + ++ A VF+ V + TM+ G+ ++L++ ++ FV+MR +
Sbjct: 71 FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V P L+K CG L GK +H +++G ++ + T +MY KC AR
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VFD + +DL+ + +++ Y+Q ++ M + ++P+ IT+VS+L +
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
+ +GK IH Y + G + T+LVDMYAKCG ++T +LF +R+++ WN MI
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
+ + A+ +F +M +GV P D++ +GAL AC+ G L+ G R HK+ + GL
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLD 369
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP----NNVVLG 469
V ++ + + +D A + + R N ++LG
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
L++ C +++ L + + +NG+ T + ++ + G A VF+ I++K
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
++ M+ +A+ + +D+ FV+M + P LL +C L +GK IH
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ K G D T L +MYAKC ++ ++F +RD++ WN +++G + G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
ALE+ M + + P+ IT + L A S L+ GK + H G V +V
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALV 278
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK 482
D+ ++ G L+ A++L M R N V S++ A ++N K
Sbjct: 279 DMYAKCGSLETARQLFDGMLER-NVVSWNSMIDAYVQNENPK 319
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 304 VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL 363
+L + SL+ + I + K G+ ++ +T LV ++ + G +D R+F + +
Sbjct: 42 LLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
+++ M+ G A + D + AL+ FV M V P F LK C L+ GK +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI---- 157
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGL---------LDEAQKLIIDMPMRP----NNVVLG 469
GL+ K G +DL + GL ++EA+K+ MP R N +V G
Sbjct: 158 ---HGLLVKS---GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/684 (38%), Positives = 396/684 (57%), Gaps = 38/684 (5%)
Query: 21 GFHRDVFVCNAII---MMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
G H + + +I ++ L +A +F + + + + W+TM R + + AL
Sbjct: 60 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSAL 119
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
L M + P+ ++ A+ K G+ +HG+V++ C + + TSLI
Sbjct: 120 KLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK-LGCDLD-LYVHTSLIS 177
Query: 138 MYVKCKNLAYARSVFD---------------GFSG----------------ASIVSWTTM 166
MYV+ L A VFD G++ +VSW M
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
I+GY T N E + LF M + V P+E T++++V C ++E G+ +H + +G
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
++ + A ID+Y KCG+ +A +F+ + KD++ + +I Y N E +F +
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK--QGIKRDTKLKTSLVDMYAKC 344
M G PN++TM+S+L CA G++++G+WIH YIDK +G+ + L+TSL+DMYAKC
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 345 GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
GDI+ +++F + + + WN MI G AM G +A+ +LF M G+ P+DITF+G L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
ACSHSG+L G+ +F M D+ + PK+EHYGCM+DLL +GL EA+++I M M P+
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 465 NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRA 524
V+ SLL ACK+H NV+LGE A + +E G VL+SNIYA+ +W +V+ R
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 525 MRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAV 584
+ D G+ K PG SSIE++ VHEFI+GD+ HP R IY ++ EM L+ G+ PD S V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Query: 585 LMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGR 644
L ++ E KE AL +HSEKLA+A+GLIS PG + IVKNLRVC + H AT L+S+IY R
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717
Query: 645 EIIVRDRNRFHHFKEGSCSCHDYW 668
EII RDR RFHHF++G CSC+DYW
Sbjct: 718 EIIARDRTRFHHFRDGVCSCNDYW 741
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 1/230 (0%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++GF ++ + NA+I +Y + G LE A LF+++ KD +SW+T+I Y L EAL
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L ++M + P+++ M+SI+ A L + +G+ +H Y+ + + L TSLIDM
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC ++ A VF+ S+ SW MI G+ + LF +MR+ G+ P++IT
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 199 LSLVKECGTVEALEFGK-LLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+ L+ C L+ G+ + T +T + ID+ G G F+
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 155/356 (43%), Gaps = 72/356 (20%)
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY---VFDS 255
LSL+ C T+++L +++HA ++ G+ + + I+ F Y VF +
Sbjct: 37 LSLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
I+ +L+I + M +A ++ ++V M G+ PN T +L CAK+ + + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR--------------- 360
+ IH ++ K G D + TSL+ MY + G ++ +++F + R
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 361 ----------------DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
D++ WN MISG A G+ + ALELF +M V P++ T + +
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR-- 462
AC+ SG ++ G+++ H + D G ++ ++DL S+ G L+ A L +P +
Sbjct: 274 SACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 463 --------------------------------PNNVVLGSLLAACKLHKNVKLGEW 486
PN+V + S+L AC + +G W
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/651 (37%), Positives = 389/651 (59%), Gaps = 7/651 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G F+ +I G + FARQ+FD + W+ +IR Y RN +AL +
Sbjct: 48 GLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMY 107
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
+M++ARV P ++ + L L++G+ +H V R G + V + LI +Y
Sbjct: 108 SNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR---LGFDADVFVQNGLIALY 164
Query: 140 VKCKNLAYARSVFDGFS--GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
KC+ L AR+VF+G +IVSWT +++ Y E + +F +MR+ V P+ +
Sbjct: 165 AKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVA 224
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++S++ ++ L+ G+ +HA ++ G+ I L + MY KCG +A+ +FD ++
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+ +L++ +AMIS YA+ E D+F +M + +RP+ I++ S + CA+ GSLE +
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
++ Y+ + + D + ++L+DM+AKCG ++ +F DRD+++W+ MI G + G
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
A+ L+ ME GV PND+TF+G L AC+HSG+++EG F++M D + P+ +HY
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYA 463
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
C++DLL RAG LD+A ++I MP++P V G+LL+ACK H++V+LGE+AA Q S++
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
G+ V +SN+YAA W V+++R M++ G++K+ G S +EV G + F +GD+ HP
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 558 TRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGA 617
I V + +L G+ + A L +++ EE E L HSE++A+AYGLIS G
Sbjct: 584 YEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGT 643
Query: 618 PIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
P+RI KNLR C + H AT L+S++ REI+VRD NRFHHFK+G CSC DYW
Sbjct: 644 PLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 4/261 (1%)
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
K +HA L G+ S L T I GD AR VFD + + +A+I Y++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
N + ++ M + P+ T LL C+ L+MG+++H+ + + G D ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 335 TSLVDMYAKCGDIDTTYRLFAA--ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG 392
L+ +YAKC + + +F +R I+ W ++S A G+ ALE+F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 393 VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
V P+ + + L A + L++G R H V GL + + + + ++ G + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 453 QKLIIDMPMRPNNVVLGSLLA 473
K++ D PN ++ ++++
Sbjct: 277 -KILFDKMKSPNLILWNAMIS 296
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/637 (39%), Positives = 378/637 (59%), Gaps = 24/637 (3%)
Query: 48 LFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELV 106
LF++ VDK D SW+++I + R+G EAL MR + P+ + I + L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 107 DLKLGKALH------GYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI 160
D+ GK H GY QS + +S++LI MY C L AR VFD +I
Sbjct: 91 DIFSGKQTHQQAFVFGY--------QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 161 VSWTTMIAGYIHTNNLNEGIRLFVKM------RREGVIPNEITILSLVKECGTVEALEFG 214
VSWT+MI GY N + + LF + + + + + ++S++ C V A
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGD--FRSARYVFDSIENKDLMICSAMISAYA 272
+ +H+F ++ G V + +D Y K G+ AR +FD I +KD + ++++S YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 273 QTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
Q+ +E F++F ++ + + N IT+ ++L+ + +G+L +GK IH + + G++ D
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
+ TS++DMY KCG ++T + F ++++ W MI+G M G ALELF M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
GV PN ITF+ L ACSH+GL EG R F+ M FG+ P +EHYGCMVDLL RAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 452 AQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAA 511
A LI M M+P++++ SLLAAC++HKNV+L E + + L+S CGY +L+S+IYA
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 512 ENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREK 571
+W DV +R M++ G+ K PG S +E+NG VH F++GD EHP+ +IYE +AE+ K
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 572 LDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDY 631
L GY + S+V ++D EEKE L HSEKLA+A+G+++ PG+ + +VKNLRVC D
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 632 HNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
HN L+S+I RE +VRD RFHHFK+G CSC DYW
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 198/372 (53%), Gaps = 13/372 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ D+FV +A+I+MY G LE AR++FD++ ++ VSW++MIR Y NG +A+ L
Sbjct: 106 GYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 81 RDMRVARVKPSE------IAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+D+ V + + ++S+I + + L +++H +V+ + GV + +
Sbjct: 166 KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI--KRGFDRGVSVGNT 223
Query: 135 LIDMYVKCKN--LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
L+D Y K +A AR +FD VS+ ++++ Y + NE +F ++ + V+
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 193 P-NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
N IT+ +++ AL GK +H +R G+ V++ T+ IDMY KCG +AR
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 252 VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG- 310
FD ++NK++ +AMI+ Y + ++F M D G+RPN IT VS+L C+ AG
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMI 369
+E +W ++ + G++ + +VD+ + G + Y L + D ++W+ ++
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Query: 370 SGCAMLGDGEAA 381
+ C + + E A
Sbjct: 464 AACRIHKNVELA 475
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/642 (38%), Positives = 386/642 (60%), Gaps = 4/642 (0%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR 87
V N++I MY ++ FAR +FD M ++D +SW+++I +NGL EA+ L +
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 88 VKPSEIAMISIIHVFAELVD-LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
+KP + M S++ + L + L L K +H + ++ N S V ST+LID Y + + +
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV--STALIDAYSRNRCMK 469
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
A +F+ + +V+W M+AGY +++ ++ ++LF M ++G ++ T+ ++ K CG
Sbjct: 470 EAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
+ A+ GK +HA+ +++G + + +++ +DMY KCGD +A++ FDSI D + +
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
MIS + + F +F QM G+ P+E T+ +L + +LE G+ IH+ K
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFV 386
D + TSLVDMYAKCG ID Y LF +I WN M+ G A G+G+ L+LF
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 387 EMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRA 446
+M++ G+ P+ +TFIG L ACSHSGL+ E + M D+G+ P++EHY C+ D L RA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 447 GLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMS 506
GL+ +A+ LI M M + + +LLAAC++ + + G+ A + L LE VL+S
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 507 NIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVA 566
N+YAA +KW ++ R M+ + K+PG S IEV +H F++ DR + +T IY V
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 567 EMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLR 626
+M + GY P+ L++++ EEKE AL YHSEKLA+A+GL+S P PIR++KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 627 VCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
VC D HNA ++++Y REI++RD NRFH FK+G CSC DYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 217/473 (45%), Gaps = 62/473 (13%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ C+ G D FV A++ +Y + G ++ + LF++M +D V W+ M++ Y G +E
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+DL + + P+EI L+L + G + + GQ
Sbjct: 230 AIDLSSAFHSSGLNPNEIT-------------LRLLARISG---DDSDAGQ--------- 264
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K+ A D S + I+ ++ Y+H+ + ++ F M V ++
Sbjct: 265 ------VKSFANGN---DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQ 315
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+T + ++ V++L G+ +H L+ G+ + + ++ + I+MY K F AR VFD+
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS---- 311
+ +DL+ +++I+ AQ E +F+Q+ CG++P++ TM S+L KA S
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL----KAASSLPE 431
Query: 312 -LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
L + K +H + K D+ + T+L+D Y++ + LF + D++ WN M++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMA 490
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
G DG L+LF M QG +D T K C + +GK+ VH + +
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-----VHAYAI- 544
Query: 431 PKVEHYGCMVDLLSRAGLLD--------EAQKLIIDMPMRPNNVVLGSLLAAC 475
G +DL +G+LD A + D P++V ++++ C
Sbjct: 545 ----KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 178/404 (44%), Gaps = 43/404 (10%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGL-----LDEALDLLR 81
F+ N +I MY + GSL +AR++FDKM D+D VSW++++ Y ++ + +A L R
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
+R V S + + ++ + + ++ HGY + G V + +L+++Y+K
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFV--AGALVNIYLK 192
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+ + +F+ +V W M+ Y+ E I L G+ PNEIT+ L
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ G + + G++ + NG S V F NK L
Sbjct: 253 ARISG--DDSDAGQVK---SFANGNDASSVSEIIF--------------------RNKGL 287
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
S Y + + F M + + +++T + +L K SL +G+ +H
Sbjct: 288 -------SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
K G+ + SL++MY K +F ++RD++ WN +I+G A G A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
+ LF+++ G+ P+ T LKA S L EG L K VH
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSL-SKQVH 440
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 12/258 (4%)
Query: 6 FISARTRGAR---FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWST 62
F+ A +G + + ++G+ D++V + I+ MY + G + A+ FD + D V+W+T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 63 MIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR 122
MI NG + A + MR+ V P E + ++ + L L+ G+ +H ++
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK-L 647
Query: 123 NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
NC + TSL+DMY KC ++ A +F +I +W M+ G E ++L
Sbjct: 648 NCTNDPF-VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 183 FVKMRREGVIPNEITILSLVKECG----TVEALEFGKLLHAFTLRNGITISVVLATAFID 238
F +M+ G+ P+++T + ++ C EA + + +H GI + + D
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLAD 763
Query: 239 MYGKCGDFRSARYVFDSI 256
G+ G + A + +S+
Sbjct: 764 ALGRAGLVKQAENLIESM 781
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
T L GK HA L L I MY KCG AR VFD + ++DL+ ++
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 267 MISAYAQTN-C----IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+++AYAQ++ C I + F +F + + + +T+ +L LC +G + + H Y
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
K G+ D + +LV++Y K G + LF RD+++WN+M+ +G E A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 382 LELFVEMEAQGVIPNDITF 400
++L + G+ PN+IT
Sbjct: 231 IDLSSAFHSSGLNPNEITL 249
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
DL LGK H ++ + L +LI MY KC +L YAR VFD +VSW ++
Sbjct: 54 DLMLGKCTHARILTFEENPERF--LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 167 IAGYIHTN-----NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+A Y ++ N+ + LF +R++ V + +T+ ++K C + + H +
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
+ G+ +A A +++Y K G + + +F+ + +D+++ + M+ AY + +E
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 282 DIFVQMNDCGIRPNEITM 299
D+ + G+ PNEIT+
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/655 (36%), Positives = 382/655 (58%), Gaps = 14/655 (2%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA 86
F+ N ++ MYG++G L ++ L +D V+W+T++ + +N L EAL+ LR+M +
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
V+P E + S++ + L L+ GK LH Y ++N + ++ + ++L+DMY CK +
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVL 355
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIPNEITILSLVKEC 205
R VFDG I W MIAGY + E + LF+ M G++ N T+ +V C
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
A + +H F ++ G+ + +DMY + G A +F +E++DL+ +
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 266 AMISAYAQTNCIDEVFDIFVQMND-----------CGIRPNEITMVSLLVLCAKAGSLEM 314
MI+ Y + ++ + +M + ++PN IT++++L CA +L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
GK IH+Y K + D + ++LVDMYAKCG + + ++F ++++ WNV+I M
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G+G+ A++L M QGV PN++TFI ACSHSG++ EG R+F+ M D+G+ P +
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV-VLGSLLAACKLHKNVKLGEWAAGQFLS 493
HY C+VDLL RAG + EA +L+ MP N SLL A ++H N+++GE AA +
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR 553
LE + + VL++NIY++ W +++RR M++ G+ KEPG S IE VH+F+ GD
Sbjct: 716 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 775
Query: 554 EHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISV 613
HP++ ++ + + E++ GY PD S VL N++ +EKE L HSEKLA+A+G+++
Sbjct: 776 SHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNT 835
Query: 614 APGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+PG IR+ KNLRVC+D H AT +S+I REII+RD RFH FK G+CSC DYW
Sbjct: 836 SPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 241/471 (51%), Gaps = 21/471 (4%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
V V N ++ +Y + G ++FD++ +++ VSW+++I + + AL+ R M
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 86 ARVKPSEIAMISIIHVFAELV---DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
V+PS ++S++ + L L +GK +H Y +R G+ + +L+ MY K
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVAMYGKL 249
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
LA ++ + F G +V+W T+++ L E + +M EGV P+E TI S++
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 203 KECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
C +E L GK LHA+ L+NG + + + +A +DMY C S R VFD + ++ +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMND-CGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +AMI+ Y+Q E +F+ M + G+ N TM ++ C ++G+ + IH
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
++ K+G+ RD ++ +L+DMY++ G ID R+F DRD++ WN MI+G E
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 381 ALELFVEME------AQG-----VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
AL L +M+ ++G + PN IT + L +C+ L +GK + H L
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNL 548
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
V +VD+ ++ G L ++K+ +P + N + ++ A +H N
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 205/408 (50%), Gaps = 8/408 (1%)
Query: 60 WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM 119
W ++R+ R+ LL EA+ DM V +KP A +++ A+L D++LGK +H +V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 120 RNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
+ G V ++ +L+++Y KC + VFD S + VSW ++I+
Sbjct: 125 K-FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTV---EALEFGKLLHAFTLRNGITISVVLATAF 236
+ F M E V P+ T++S+V C + E L GK +HA+ LR G S ++ T
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-L 242
Query: 237 IDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNE 296
+ MYGK G S++ + S +DL+ + ++S+ Q + E + +M G+ P+E
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
T+ S+L C+ L GK +H+Y K G + ++ + ++LVDMY C + + R+F
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQ 414
DR I +WN MI+G + + AL LF+ M E+ G++ N T G + AC SG
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
K H V GL ++D+ SR G +D A ++ M R
Sbjct: 423 R-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 19/330 (5%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F + G RD FV N ++ MY +G ++ A ++F KM D+D V+W+TMI Y + ++
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 76 ALDLLRDMR---------VARV--KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNC 124
AL LL M+ +RV KP+ I +++I+ A L L GK +H Y ++N
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 125 GQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFV 184
+ V + ++L+DMY KC L +R VFD ++++W +I Y N E I L
Sbjct: 550 --TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 185 KMRREGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKC 243
M +GV PNE+T +S+ C ++ G ++ + G+ S +D+ G+
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 244 GDFRSARYVFDSIENKDLMICSAMISAYAQTNCID--EVFDIFVQMNDCGIRPNEITMVS 301
G + A Y ++ +D A S + + E+ +I Q N + PN +
Sbjct: 668 GRIKEA-YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ-NLIQLEPNVASHYV 725
Query: 302 LLV-LCAKAGSLEMGKWIHSYIDKQGIKRD 330
LL + + AG + + + +QG++++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 7 ISARTRGAR---FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM 63
+SA +G + +N DV V +A++ MY + G L+ +R++FD++ K+ ++W+ +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
I YG +G EA+DLLR M V VKP+E+ IS+
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/657 (37%), Positives = 381/657 (57%), Gaps = 9/657 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++GF V N+++ Y + ++ AR++FD+M ++D +SW+++I Y NGL ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVD---LKLGKALHGYVMRNRNCGQSGVPLS 132
L + M V+ + EI + +I+ VFA D + LG+A+H ++ C
Sbjct: 280 GLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKA--CFSREDRFC 334
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
+L+DMY KC +L A++VF S S+VS+T+MIAGY E ++LF +M EG+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P+ T+ +++ C L+ GK +H + N + + ++ A +DMY KCG + A V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIF-VQMNDCGIRPNEITMVSLLVLCAKAGS 311
F + KD++ + +I Y++ +E +F + + + P+E T+ +L CA +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
+ G+ IH YI + G D + SLVDMYAKCG + + LF +D++ W VMI+G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
M G G+ A+ LF +M G+ ++I+F+ L ACSHSGL+ EG R F+ M H+ + P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
VEHY C+VD+L+R G L +A + I +MP+ P+ + G+LL C++H +VKL E A +
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 492 LSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMG 551
LE GY VLM+NIYA KW V +R+ + G+ K PG S IE+ G V+ F+ G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 552 DREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLI 611
D +PET I + ++R ++ GY+P L++ + EKE AL HSEKLAMA G+I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 612 SVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
S G IR+ KNLRVC D H +S++ REI++RD NRFH FK+G CSC +W
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 222/444 (50%), Gaps = 4/444 (0%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NGF D + + + +MY G L+ A ++FD++ + A+ W+ ++ ++G ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ M + V+ + F+ L + G+ LHG+++++ ++ V SL+ Y
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV--GNSLVAFY 240
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+K + + AR VFD + ++SW ++I GY+ +G+ +FV+M G+ + TI+
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
S+ C + G+ +H+ ++ + +DMY KCGD SA+ VF + ++
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
++ ++MI+ YA+ E +F +M + GI P+ T+ ++L CA+ L+ GK +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+I + + D + +L+DMYAKCG + +F+ +DI+ WN +I G +
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 380 AALELF-VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
AL LF + +E + P++ T L AC+ +G+ + H + G
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANS 539
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMR 462
+VD+ ++ G L A L D+ +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASK 563
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 210/433 (48%), Gaps = 8/433 (1%)
Query: 54 DKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKA 113
D+ +T +R + +G L+ A+ LL + P + S++ + A+ LK GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 114 LHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
+ ++ N S + SL MY C +L A VFD + W ++ +
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSL--MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
+ + I LF KM GV + T + K ++ ++ G+ LH F L++G +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
+ + Y K SAR VFD + +D++ +++I+ Y ++ +FVQM GI
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+ T+VS+ CA + + +G+ +HS K R+ + +L+DMY+KCGD+D+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F +DR ++ + MI+G A G A++LF EME +G+ P+ T L C+ LL
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNVVLGS 470
EGKR+ H+ + + L + ++D+ ++ G + EA+ + +M ++ N ++G
Sbjct: 414 DEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 471 LLAACKLHKNVKL 483
C ++ + L
Sbjct: 473 YSKNCYANEALSL 485
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/650 (36%), Positives = 372/650 (57%), Gaps = 39/650 (6%)
Query: 56 DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH 115
+++ ++ +R+ R+ + + +R + + + + I+ +++ L G LH
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 116 GYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN 175
G + V T +DMY C + YAR+VFD S +V+W TMI Y
Sbjct: 135 GVAFKIATLCDPFV--ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
++E +LF +M+ V+P+E+ + ++V CG + + + ++ F + N + + L TA
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 236 FIDMYG-------------------------------KCGDFRSARYVFDSIENKDLMIC 264
+ MY KCG A+ +FD E KDL+
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ MISAY +++ E +F +M GI+P+ ++M S++ CA G L+ KW+HS I
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G++ + + +L++MYAKCG +D T +F R+++ W+ MI+ +M G+ AL L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F M+ + V PN++TF+G L CSHSGL++EGK++F M ++ + PK+EHYGCMVDL
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
RA LL EA ++I MP+ N V+ GSL++AC++H ++LG++AA + L LE G VL
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 505 MSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEI 564
MSNIYA E +W DV +IRR M + + KE G+S I+ NG HEF++GD+ H ++ IY
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 565 VAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAP------ 618
+ E+ KL GY PD +VL++++ EEK+ + +HSEKLA+ +GL++
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 619 IRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
IRIVKNLRVC+D H L+S++Y REIIVRDR RFH +K G CSC DYW
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 198/400 (49%), Gaps = 34/400 (8%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D FV + MY G + +AR +FD+M +D V+W+TMI Y R GL+DEA L +M+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN----------------------- 121
+ V P E+ + +I+ +++ +A++ +++ N
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 122 ------RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN 175
R + +ST+++ Y KC L A+ +FD +V WTTMI+ Y+ ++
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
E +R+F +M G+ P+ +++ S++ C + L+ K +H+ NG+ + + A
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
I+MY KCG + R VF+ + ++++ S+MI+A + + +F +M + PN
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 296 EITMVSLLVLCAKAGSLEMGKWIH-SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
E+T V +L C+ +G +E GK I S D+ I + +VD++ + + +
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 355 AA-ATDRDILMWNVMISGCAMLGD---GEAALELFVEMEA 390
+ ++++W ++S C + G+ G+ A + +E+E
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEP 544
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 147 YARSVFDGF-SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
YA +VF S + + + ++ I + ++R G ++ + L ++K
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
V AL G LH + + T F+DMY CG AR VFD + ++D++ +
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
MI Y + +DE F +F +M D + P+E+ + +++ C + G++ + I+ ++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 326 GIKRDTKLKTSLVDMYA-------------------------------KCGDIDTTYRLF 354
++ DT L T+LV MYA KCG +D +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
+D++ W MIS + AL +F EM G+ P+ ++ + AC++ G+L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
+ K + H +H GL ++ ++++ ++ G LD + + MP R N V S++ A
Sbjct: 362 KAKWV-HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINA 419
Query: 475 CKLH 478
+H
Sbjct: 420 LSMH 423
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R++FV A++ Y + G L+ A+ +FD+ KD V W+TMI Y + EAL + +M
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
+ +KP ++M S+I A L L K +H + + N +S + ++ +LI+MY KC
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI--HVNGLESELSINNALINMYAKCG 393
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
L R VF+ ++VSW++MI ++ + LF +M++E V PNE+T + ++
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 204 ECGTVEALEFGKLLHA-FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-NKDL 261
C +E GK + A T IT + +D++G+ R A V +S+ ++
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 262 MICSAMISA 270
+I +++SA
Sbjct: 514 VIWGSLMSA 522
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NG ++ + NA+I MY + G L+ R +F+KM ++ VSWS+MI +G +AL L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
M+ V+P+E+ + +++ + ++ GK + + N + ++D++
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI-TPKLEHYGCMVDLF 491
Query: 140 VKCKNLAYARSVFDGFSGAS-IVSWTTMIAG 169
+ L A V + AS +V W ++++
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSA 522
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/653 (37%), Positives = 381/653 (58%), Gaps = 9/653 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG + + V N++I +Y + G++ AR LFDK K V+W++MI Y NGL EAL
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ MR+ V+ SE + S+I + A L +L+ + LH V++ + T+L+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI--RTALMVA 339
Query: 139 YVKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
Y KC + A +F ++VSWT MI+G++ + E + LF +M+R+GV PNE T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++ + E +HA ++ S + TA +D Y K G A VF I+
Sbjct: 400 YSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA-GSLEMGK 316
+KD++ SAM++ YAQT + +F ++ GI+PNE T S+L +CA S+ GK
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLG 376
H + K + + ++L+ MYAK G+I++ +F ++D++ WN MISG A G
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
AL++F EM+ + V + +TFIG AC+H+GL++EG++ F MV D + P EH
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
CMVDL SRAG L++A K+I +MP + + ++LAAC++HK +LG AA + ++++
Sbjct: 636 SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP 695
Query: 497 HKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHP 556
VL+SN+YA W + + +R+ M + + KEPG S IEV + F+ GDR HP
Sbjct: 696 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHP 755
Query: 557 ETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPG 616
+IY + ++ +L ++GY PD S VL +ID E KE L HSE+LA+A+GLI+ G
Sbjct: 756 LKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKG 815
Query: 617 APIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHF-KEGSCSCHDYW 668
+P+ I+KNLRVC D H L+++I REI+VRD NRFHHF +G CSC D+W
Sbjct: 816 SPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 236/447 (52%), Gaps = 19/447 (4%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
C + GF DV V +++ Y + + + R++FD+M +++ V+W+T+I Y RN + DE
Sbjct: 119 CIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEV 178
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
L L M+ +P+ + + V AE + G+ L + + +N +P+S SLI
Sbjct: 179 LTLFMRMQNEGTQPNSFTFAAALGVLAE--EGVGGRGLQVHTVVVKNGLDKTIPVSNSLI 236
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN-EGIRLFVKMRREGVIPNE 195
++Y+KC N+ AR +FD S+V+W +MI+GY N L+ E + +F MR V +E
Sbjct: 237 NLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRLNYVRLSE 295
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+ S++K C ++ L F + LH ++ G + TA + Y KC A +F
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 256 IE-NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
I +++ +AMIS + Q + +E D+F +M G+RPNE T +L E
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE- 414
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
+H+ + K +R + + T+L+D Y K G ++ ++F+ D+DI+ W+ M++G A
Sbjct: 415 ---VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL-LQEGKRLFHKMVHDFGLVPKV 433
G+ EAA+++F E+ G+ PN+ TF L C+ + + +GK+ H F + ++
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRL 526
Query: 434 EHYGC----MVDLLSRAGLLDEAQKLI 456
+ C ++ + ++ G ++ A+++
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVF 553
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 153/600 (25%), Positives = 267/600 (44%), Gaps = 77/600 (12%)
Query: 28 VCNAIIMMYGEVGS--LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
V I +G V S L A LFDK +D S+ +++ + R+G EA L ++
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG----VPLSTSLIDMYVK 141
++ S++ V A L D G+ LH C + G V + TSL+D Y+K
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHC------QCIKFGFLDDVSVGTSLVDTYMK 140
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
N R VFD ++V+WTT+I+GY + +E + LF++M+ EG PN T +
Sbjct: 141 GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ G +H ++NG+ ++ ++ + I++Y KCG+ R AR +FD E K +
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ ++MIS YA E +F M +R +E + S++ LCA L + +H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEA 380
+ K G D ++T+L+ Y+KC + RLF +++ W MISG E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 381 ALELFVEMEAQGVIPNDITF---IGALKACSHS--------------------------- 410
A++LF EM+ +GV PN+ T+ + AL S S
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 411 -GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNV 466
G ++E ++F + D +V + M+ ++ G + A K+ ++ ++PN
Sbjct: 441 LGKVEEAAKVFSG-IDDKDIVA----WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQF------LSLESHKCGYNVLMSNIYAAENKWGDVSD 520
S+L C N +G+ QF L+S C + L++ +YA + +
Sbjct: 496 TFSSILNVCAA-TNASMGQ--GKQFHGFAIKSRLDSSLCVSSALLT-MYAKKGNIESAEE 551
Query: 521 IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMRE---KLDNVGY 577
+ + R+ + S + I G +H + + ++ EM++ K+D V +
Sbjct: 552 VFKRQREKDLV------------SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++ + V +A++ MY + G++E A ++F + +KD VSW++MI Y ++G +
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV-MRNRNCGQSGVPLSTS 134
ALD+ ++M+ +VK + ++ I VFA L + Y + R+C + S
Sbjct: 580 ALDVFKEMKKRKVK---MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 636
Query: 135 -LIDMYVKCKNLAYARSVFDGF---SGASIVSWTTMIAG 169
++D+Y + L A V + +G++I W T++A
Sbjct: 637 CMVDLYSRAGQLEKAMKVIENMPNPAGSTI--WRTILAA 673
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 362/650 (55%), Gaps = 6/650 (0%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+G ++ + + I+ MY + +E AR++FD+M +KD + W+TMI Y +N + E++ +
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 80 LRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
RD+ + + ++ I+ AEL +L+LG +H + C L T I +
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT-GCYSHDYVL-TGFISL 265
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC + ++F F IV++ MI GY + LF ++ G T+
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+SLV G L +H + L++ ++TA +Y K + SAR +FD
Sbjct: 326 VSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
K L +AMIS Y Q ++ +F +M PN +T+ +L CA+ G+L +GKW+
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + + + T+L+ MYAKCG I RLF T ++ + WN MISG + G G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ AL +F EM G+ P +TF+ L ACSH+GL++EG +F+ M+H +G P V+HY C
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MVD+L RAG L A + I M + P + V +LL AC++HK+ L + + L+
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
GY+VL+SNI++A+ + + +R+ + ++K PG + IE+ + H F GD+ HP+
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 559 RRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAP 618
+ IYE + ++ K+ GY P+ L +++ EE+E + HSE+LA+A+GLI+ PG
Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTE 742
Query: 619 IRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
IRI+KNLRVC D H T L+S+I R I+VRD NRFHHFK+G CSC DYW
Sbjct: 743 IRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 210/461 (45%), Gaps = 9/461 (1%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF D+ + + ++G++ +AR +F + D ++ ++R + N +L +
Sbjct: 46 HGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSV 105
Query: 80 LRDMRVAR-VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+R + +KP+ I + D + G+ +HG + + C S + L ++++ M
Sbjct: 106 FAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD-GC-DSELLLGSNIVKM 163
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP-NEIT 197
Y K + AR VFD + W TMI+GY E I++F + E + T
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT 223
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+L ++ ++ L G +H+ + G + T FI +Y KCG + +F
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR 283
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
D++ +AMI Y + +F ++ G R T+VSL+ + +G L +
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYA 340
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
IH Y K + T+L +Y+K +I++ +LF + ++ + WN MISG G
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E A+ LF EM+ PN +T L AC+ G L GK + H +V +
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-HDLVRSTDFESSIYVST 459
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++ + ++ G + EA++L D+ + N V ++++ LH
Sbjct: 460 ALIGMYAKCGSIAEARRL-FDLMTKKNEVTWNTMISGYGLH 499
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+C ++ F V A+ +Y ++ +E AR+LFD+ +K SW+ MI Y +NGL ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L R+M+ + P+ + + I+ A+L L LGK +H V R+ + +S + +ST+L
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV-RSTDF-ESSIYVSTAL 461
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I MY KC ++A AR +FD + + V+W TMI+GY E + +F +M G+ P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 196 ITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+T L ++ C ++ G ++ ++ R G SV +D+ G+ G + A
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 175/443 (39%), Gaps = 44/443 (9%)
Query: 114 LHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
LHG+ ++ + L T L + YAR +F + + ++ G+
Sbjct: 45 LHGF--------RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVN 96
Query: 174 NNLNEGIRLFVKMRREG-VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
+ + + +F +R+ + PN T + G+++H + +G ++L
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCG 291
+ + MY K AR VFD + KD ++ + MIS Y + E +F + N+
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
R + T++ +L A+ L +G IHS K G + T + +Y+KCG I
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 352 RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH-- 409
LF DI+ +N MI G G+ E +L LF E+ G T + + H
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 410 -----SGLLQEGKRLFHKMVHD------------------FGLVPK--VEHYGCMVDLLS 444
G + L H V F P+ + + M+ +
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 445 RAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY 501
+ GL ++A L +M PN V + +L+AC + LG+W S + Y
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 502 -NVLMSNIYAAENKWGDVSDIRR 523
+ + +YA K G +++ RR
Sbjct: 457 VSTALIGMYA---KCGSIAEARR 476
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/697 (36%), Positives = 376/697 (53%), Gaps = 50/697 (7%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
GF +VFV NA++ MY SL AR++FD+M D VSW+++I +Y + G AL++
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 80 LRDMRVA-RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
M +P I +++++ A L LGK LH + + + V L+DM
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV--GNCLVDM 273
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE--------- 189
Y KC + A +VF S +VSW M+AGY + +RLF KM+ E
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 190 --------------------------GVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
G+ PNE+T++S++ C +V AL GK +H + ++
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 224 -------NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK--DLMICSAMISAYAQT 274
NG ++ IDMY KC +AR +FDS+ K D++ + MI Y+Q
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 275 NCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY-IDKQGIKRDT 331
++ ++ +M DC RPN T+ LV CA +L +GK IH+Y + Q
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
+ L+DMYAKCG I +F ++ + W +++G M G GE AL +F EM
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
G + +T + L ACSHSG++ +G F++M FG+ P EHY C+VDLL RAG L+
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 452 AQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAA 511
A +LI +MPM P VV + L+ C++H V+LGE+AA + L S+ G L+SN+YA
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 512 ENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREK 571
+W DV+ IR MR G+ K PG S +E F +GD+ HP + IY+++ + ++
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQR 753
Query: 572 LDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDY 631
+ ++GY P+ L ++D EEK+ L HSEKLA+AYG+++ GA IRI KNLRVC D
Sbjct: 754 IKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDC 813
Query: 632 HNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
H A +SRI +II+RD +RFHHFK GSCSC YW
Sbjct: 814 HTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 235/509 (46%), Gaps = 55/509 (10%)
Query: 32 IIMMYGEVGSLEFARQLFDKMVDKDA--VSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
+I Y VG L A L + DA W+++IR+YG NG ++ L L M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
P + E+ ++ G++ H + S V + +L+ MY +C++L+ AR
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI--SNVFVGNALVAMYSRCRSLSDAR 182
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIPNEITILSLVKECGTV 208
VFD S +VSW ++I Y + +F +M E G P+ IT+++++ C ++
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
GK LH F + + + ++ + +DMY KCG A VF ++ KD++ +AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 269 SAYAQTNCIDEVFDIFVQMND-----------------------------------CGIR 293
+ Y+Q ++ +F +M + GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSY-------IDKQGIKRDTKLKTSLVDMYAKCGD 346
PNE+T++S+L CA G+L GK IH Y + K G + + L+DMYAKC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 347 IDTTYRLFAAAT--DRDILMWNVMISGCAMLGDGEAALELFVEM--EAQGVIPNDITFIG 402
+DT +F + + +RD++ W VMI G + GD ALEL EM E PN T
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
AL AC+ L+ GK++ + + + C++D+ ++ G + +A +L+ D M
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMA 541
Query: 463 PNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
N V SL+ +H GE A G F
Sbjct: 542 KNEVTWTSLMTGYGMH---GYGEEALGIF 567
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 208/449 (46%), Gaps = 48/449 (10%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGF--SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
L++ LI Y+ L++A S+ F S A + W ++I Y N+ + LF M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
P+ T + K CG + ++ G+ HA +L G +V + A + MY +C
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCA 307
AR VFD + D++ +++I +YA+ ++F +M N+ G RP+ IT+V++L CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
G+ +GK +H + + ++ + LVDMYAKCG +D +F+ + +D++ WN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
M++G + +G E A+ LF +M+ + + + +T+ A+ + GL
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL--------------- 345
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC----KLHKNVKL 483
E G +LS ++PN V L S+L+ C L ++
Sbjct: 346 ----GYEALGVCRQMLSSG--------------IKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 484 GEWAAGQFLSLESHKCG-YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVN 542
+A + L + G N++++ + K V D RAM D+ KE V + V
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV-DTARAMFDSLSPKERDVVTWTV- 445
Query: 543 GSVHEFIMGDREHPETRRIYEIVAEMREK 571
I G +H + + E+++EM E+
Sbjct: 446 -----MIGGYSQHGDANKALELLSEMFEE 469
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 45/342 (13%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK--DAVSWSTMIRNYGRNGLLDEA 76
+NG + V N +I MY + ++ AR +FD + K D V+W+ MI Y ++G ++A
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 77 LDLLRDM--RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL--S 132
L+LL +M + +P+ + + A L L++GK +H Y +RN+ Q+ VPL S
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ---QNAVPLFVS 516
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
LIDMY KC +++ AR VFD + V+WT+++ GY E + +F +MRR G
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 193 PNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
+ +T+L ++ C ++ G + + G++ +D+ G+ G +A
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 252 VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
+ + + + P + V+ L C G
Sbjct: 637 LIEEMP----------------------------------MEPPPVVWVAFLSCCRIHGK 662
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+E+G++ I + D T L ++YA G R+
Sbjct: 663 VELGEYAAEKITELASNHDGSY-TLLSNLYANAGRWKDVTRI 703
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 9/283 (3%)
Query: 183 FVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGK 242
++K+ EIT + +C T+ + KL+H L GI +++ L + I Y
Sbjct: 17 YIKVSLFSTSAPEITP-PFIHKCKTISQV---KLIHQKLLSFGI-LTLNLTSHLISTYIS 71
Query: 243 CGDFRSARYVFDSIENKDLMI--CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMV 300
G A + D + +++I +Y C ++ +F M+ P+ T
Sbjct: 72 VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131
Query: 301 SLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR 360
+ C + S+ G+ H+ G + + +LV MY++C + ++F +
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLLQEGKRL 419
D++ WN +I A LG + ALE+F M + G P++IT + L C+ G GK+L
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
H ++ + C+VD+ ++ G++DEA + +M ++
Sbjct: 252 -HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/601 (39%), Positives = 365/601 (60%), Gaps = 23/601 (3%)
Query: 72 LLDEALDLLRDMRVARV-KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
++++ ++LL+ V+ + K +I SI H + + D +LGK L Y++ S P
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVS-ISDAELGKHLIFYLV----SLPSPPP 68
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGA-SIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+S YA VF ++ W T+I GY N L+ +MR
Sbjct: 69 MS--------------YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVS 114
Query: 190 GVI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
G++ P+ T L+K T+ + G+ +H+ +R+G + + + + +Y CGD S
Sbjct: 115 GLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS 174
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
A VFD + KDL+ +++I+ +A+ +E ++ +MN GI+P+ T+VSLL CAK
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
G+L +GK +H Y+ K G+ R+ L+D+YA+CG ++ LF D++ + W +
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 369 ISGCAMLGDGEAALELFVEMEA-QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
I G A+ G G+ A+ELF ME+ +G++P +ITF+G L ACSH G+++EG F +M ++
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWA 487
+ P++EH+GCMVDLL+RAG + +A + I MPM+PN V+ +LL AC +H + L E+A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 488 AGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHE 547
Q L LE + G VL+SN+YA+E +W DV IR+ M G+ K PG S +EV VHE
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 548 FIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMA 607
F+MGD+ HP++ IY + EM +L + GY P IS V ++++ EEKE A+ YHSEK+A+A
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534
Query: 608 YGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDY 667
+ LIS +PI +VKNLRVC D H A L+S++Y REI+VRDR+RFHHFK GSCSC DY
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Query: 668 W 668
W
Sbjct: 595 W 595
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 180/360 (50%), Gaps = 9/360 (2%)
Query: 42 LEFARQLFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDLLRDMRVA-RVKPSEIAMISII 99
+ +A ++F K+ + W+T+IR Y G A L R+MRV+ V+P +I
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
+ D++LG+ +H V+ R+ S + + SL+ +Y C ++A A VFD
Sbjct: 129 KAVTTMADVRLGETIHSVVI--RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+V+W ++I G+ E + L+ +M +G+ P+ TI+SL+ C + AL GK +H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
+ ++ G+T ++ + +D+Y +CG A+ +FD + +K+ + +++I A E
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 280 VFDIFVQMNDC-GIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSL 337
++F M G+ P EIT V +L C+ G ++ G ++ ++ I+ + +
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 338 VDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
VD+ A+ G + Y + ++++W ++ C + GD + L F ++ + PN
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 13/202 (6%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF ++V N+++ +Y G + A ++FDKM +KD V+W+++I + NG +EAL L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLSTSLI 136
+M +KP ++S++ A++ L LGK +H Y+++ RN S V L+
Sbjct: 210 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV-----LL 264
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNE 195
D+Y +C + A+++FD + VSWT++I G E I LF M EG++P E
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324
Query: 196 IT---ILSLVKECGTV-EALEF 213
IT IL CG V E E+
Sbjct: 325 ITFVGILYACSHCGMVKEGFEY 346
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/676 (35%), Positives = 371/676 (54%), Gaps = 47/676 (6%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
RD+ N +I Y +L AR+LF+ M ++D SW+TM+ Y +NG +D+A +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLK----LGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
M + ++++ +++ + + ++ L K+ + + + NC L+
Sbjct: 183 M----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC----------LLGG 228
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
+VK K + AR FD + +VSW T+I GY + ++E +LF + + V +
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA------------------------- 233
++ EA E L RN ++ + +LA
Sbjct: 289 SGYIQNRMVEEARE---LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 234 -TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
I Y +CG A+ +FD + +D + +AMI+ Y+Q+ E +FVQM G
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 293 RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
R N + S L CA +LE+GK +H + K G + + +L+ MY KCG I+
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 353 LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
LF +DI+ WN MI+G + G GE AL F M+ +G+ P+D T + L ACSH+GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLL 472
+ +G++ F+ M D+G++P +HY CMVDLL RAGLL++A L+ +MP P+ + G+LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 473 AACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISK 532
A ++H N +L E AA + ++E G VL+SN+YA+ +WGDV +R MRD G+ K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 533 EPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEE 592
PG S IE+ H F +GD HPE I+ + E+ ++ GY S VL +++ EE
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
Query: 593 KETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRN 652
KE + YHSE+LA+AYG++ V+ G PIR++KNLRVC+D HNA ++RI GR II+RD N
Sbjct: 706 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNN 765
Query: 653 RFHHFKEGSCSCHDYW 668
RFHHFK+GSCSC DYW
Sbjct: 766 RFHHFKDGSCSCGDYW 781
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 186/437 (42%), Gaps = 58/437 (13%)
Query: 54 DKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKA 113
D D W+ I +Y R G +EAL + + M + S ++ +I + + +L +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARK 116
Query: 114 L----------------HGYVMRNRNCGQS----------GVPLSTSLIDMYVKCKNLAY 147
L GYV RNRN G++ V +++ Y + +
Sbjct: 117 LFDEMPERDLVSWNVMIKGYV-RNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 148 ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGT 207
ARSVFD + VSW +++ Y+ + + E LF ++ + VK+
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
VEA +F + +R+ VV I Y + G AR +FD +D+ +AM
Sbjct: 236 VEARQF---FDSMNVRD-----VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
+S Y Q ++E ++F +M + NE++ ++L + +EM K + +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMP---- 339
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
R+ +++ YA+CG I LF RD + W MI+G + G AL LFV+
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD-----L 442
ME +G N +F AL C+ L+ GK+L + LV GC V +
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGR------LVKGGYETGCFVGNALLLM 453
Query: 443 LSRAGLLDEAQKLIIDM 459
+ G ++EA L +M
Sbjct: 454 YCKCGSIEEANDLFKEM 470
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 29/341 (8%)
Query: 124 CGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF 183
CG S + I Y++ A VF S VS+ MI+GY+ +LF
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 184 VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC 243
+M ++ + I V+ +A E L R+ + + +L+ Y +
Sbjct: 119 DEMPERDLVSWNVMIKGYVRNRNLGKARE---LFEIMPERDVCSWNTMLSG-----YAQN 170
Query: 244 GDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL 303
G AR VFD + K+ + +A++SAY Q + ++E +F + + +
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL---------VS 221
Query: 304 VLCAKAGSLEMGKWIHS--YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
C G ++ K + + + D + RD +++ YA+ G ID +LF + +D
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
+ W M+SG E A ELF +M + N++++ L ++ K LF
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF- 335
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
D V + M+ ++ G + EA+ L MP R
Sbjct: 336 ----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G+ FV NA+++MY + GS+E A LF +M KD VSW+TMI Y R+G + AL
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 79 LLRDMRVARVKPSEIAMISII 99
M+ +KP + M++++
Sbjct: 497 FFESMKREGLKPDDATMVAVL 517
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/526 (42%), Positives = 328/526 (62%), Gaps = 1/526 (0%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
+++YAR +F+ S IV + +M GY N E LFV++ +G++P+ T SL+K
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C +ALE G+ LH +++ G+ +V + I+MY +C D SAR VFD I ++
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+AMI+ YA+ N +E +F +M ++PNEIT++S+L CA GSL++GKWIH Y
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K + K+ T+L+DM+AKCG +D +F +D W+ MI A G E ++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
+F M ++ V P++ITF+G L ACSH+G ++EG++ F +MV FG+VP ++HYG MVDLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 444 SRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNV 503
SRAG L++A + I +P+ P ++ LLAAC H N+ L E + + L+ G V
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 504 LMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYE 563
++SN+YA KW V +R+ M+D K PG SSIEVN VHEF GD T +++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 497
Query: 564 IVAEMREKLDNVGYTPDISAVL-MNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIV 622
+ EM ++L GY PD S V+ N++ +EKE L YHSEKLA+ +GL++ PG IR+V
Sbjct: 498 ALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVV 557
Query: 623 KNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
KNLRVC D HNA L+S I+GR++++RD RFHHF++G CSC D+W
Sbjct: 558 KNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 171/337 (50%), Gaps = 6/337 (1%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
S+ +AR LF+ M + D V +++M R Y R E L ++ + P S++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA 158
A L+ G+ LH M+ G V + +LI+MY +C+++ AR VFD
Sbjct: 137 KACAVAKALEEGRQLHCLSMK---LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
+V + MI GY N NE + LF +M+ + + PNEIT+LS++ C + +L+ GK +H
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+ ++ V + TA IDM+ KCG A +F+ + KD SAMI AYA +
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSL 337
+ +F +M ++P+EIT + LL C+ G +E G K+ + K GI K S+
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 338 VDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGCA 373
VD+ ++ G+++ Y ++W ++++ C+
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 28/346 (8%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +V+VC +I MY E ++ AR +FD++V+ V ++ MI Y R +EAL L
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R+M+ +KP+EI ++S++ A L L LGK +H Y ++ C V ++T+LIDM+
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY--VKVNTALIDMFA 276
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC +L A S+F+ +W+ MI Y + + + +F +MR E V P+EIT L
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 201 LVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-N 258
L+ C +E G K + GI S+ + +D+ + G+ A D + +
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 259 KDLMICSAMISAYAQTNCID-------EVFDI-------FVQMNDCGIRPNEITMVSLL- 303
M+ +++A + N +D +F++ +V +++ R + V L
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLR 456
Query: 304 --------VLCAKAGSLEMGKWIHSYIDKQGIKR-DTKLKTSLVDM 340
V S+E+ +H + G+K TKL +L +M
Sbjct: 457 KVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
++ ++ F + V V A+I M+ + GSL+ A +F+KM KD +WS MI Y +G +
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST- 133
+++ + MR V+P EI + +++ + G+ G ++ + G+ S
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSH-----TGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 134 ---SLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNNLN 177
S++D+ + NL A D + + W ++A NNL+
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLD 416
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 369/648 (56%), Gaps = 2/648 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF + + A++ +Y + +E A F + ++ V W+ M+ YG L + +
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R M++ + P++ SI+ L DL+LG+ +H +++ Q + + LIDMY
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN--FQLNAYVCSVLIDMYA 536
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K L A + F+G +VSWTTMIAGY N ++ + F +M G+ +E+ + +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
V C ++AL+ G+ +HA +G + + A + +Y +CG + F+ E D
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +A++S + Q+ +E +FV+MN GI N T S + ++ +++ GK +H+
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
I K G +T++ +L+ MYAKCG I + F + ++ + WN +I+ + G G
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
AL+ F +M V PN +T +G L ACSH GL+ +G F M ++GL PK EHY C+V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
D+L+RAGLL A++ I +MP++P+ +V +LL+AC +HKN+++GE+AA L LE
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 896
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
VL+SN+YA KW R+ M++ G+ KEPG S IEV S+H F +GD+ HP
Sbjct: 897 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 956
Query: 561 IYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIR 620
I+E ++ ++ +GY D ++L + E+K+ + HSEKLA+++GL+S+ PI
Sbjct: 957 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPIN 1016
Query: 621 IVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
++KNLRVC+D H +S++ REIIVRD RFHHF+ G+CSC DYW
Sbjct: 1017 VMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 227/462 (49%), Gaps = 6/462 (1%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
G VCN +I +Y G ++ AR++FD + KD SW MI +N EA+ L
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDM 138
DM V + P+ A S++ ++ L++G+ LHG V++ G S + +L+ +
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK---LGFSSDTYVCNALVSL 332
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y NL A +F S V++ T+I G + + LF +M +G+ P+ T+
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
SLV C L G+ LHA+T + G + + A +++Y KC D +A F E
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+++++ + M+ AY + + F IF QM I PN+ T S+L C + G LE+G+ I
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
HS I K + + + + L+DMYAK G +DT + + +D++ W MI+G
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ AL F +M +G+ +++ A+ AC+ L+EG+++ H G +
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNA 631
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
+V L SR G ++E+ L + +N+ +L++ + N
Sbjct: 632 LVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGN 672
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 213/422 (50%), Gaps = 10/422 (2%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G L A ++FD+M ++ +W+ MI+ L+ E L M V P+E ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 100 HVF-AELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA 158
V + + +H ++ + S V + LID+Y + + AR VFDG
Sbjct: 194 EACRGGSVAFDVVEQIHARILY-QGLRDSTV-VCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
SW MI+G E IRLF M G++P S++ C +E+LE G+ LH
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
L+ G + + A + +Y G+ SA ++F ++ +D + + +I+ +Q +
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
+ ++F +M+ G+ P+ T+ SL+V C+ G+L G+ +H+Y K G + K++ +L+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 339 DMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
++YAKC DI+T F ++++WNVM+ +L D + +F +M+ + ++PN
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVH-DFGLVPKVEHYGC--MVDLLSRAGLLDEAQKL 455
T+ LK C G L+ G+++ +++ +F L Y C ++D+ ++ G LD A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----NAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 456 II 457
+I
Sbjct: 548 LI 549
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 178/378 (47%), Gaps = 7/378 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ F + +VC+ +I MY ++G L+ A + + KD VSW+TMI Y + D+AL
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
R M ++ E+ + + + A L LK G+ +H + S +P +L+ +
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG--FSSDLPFQNALVTL 635
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y +C + + F+ ++W +++G+ + N E +R+FV+M REG+ N T
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
S VK ++ GK +HA + G + A I MY KCG A F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KW 317
K+ + +A+I+AY++ E D F QM +RPN +T+V +L C+ G ++ G +
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLG 376
S + G+ + +VDM + G + + D L+W ++S C +
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 377 D---GEAALELFVEMEAQ 391
+ GE A +E+E +
Sbjct: 876 NMEIGEFAAHHLLELEPE 893
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 176/370 (47%), Gaps = 14/370 (3%)
Query: 108 LKLGKALHGYVMR----NRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSW 163
L G+ LH +++ + C LS L D Y+ +L A VFD +I +W
Sbjct: 101 LDEGRKLHSQILKLGLDSNGC------LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 164 TTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC-GTVEALEFGKLLHAFTL 222
MI N + E LFV+M E V PNE T +++ C G A + + +HA L
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFD 282
G+ S V+ ID+Y + G AR VFD + KD AMIS ++ C E
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+F M GI P S+L C K SLE+G+ +H + K G DT + +LV +Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 343 KCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIG 402
G++ + +F+ + RD + +N +I+G + G GE A+ELF M G+ P+ T
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
+ ACS G L G++L H G + G +++L ++ ++ A ++ +
Sbjct: 395 LVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 463 PNNVVLGSLL 472
NVVL +++
Sbjct: 454 --NVVLWNVM 461
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 7/318 (2%)
Query: 148 ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC-G 206
R+VF G S+ I+ YI + + R+ + G+ PN T+ L++ C
Sbjct: 39 TRTVFPTLCGTRRASFAA-ISVYISEDESFQEKRI-DSVENRGIRPNHQTLKWLLEGCLK 96
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
T +L+ G+ LH+ L+ G+ + L+ D Y GD A VFD + + + +
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL--EMGKWIHSYIDK 324
MI A N I EVF +FV+M + PNE T +L C + GS+ ++ + IH+ I
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILY 215
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
QG++ T + L+D+Y++ G +D R+F +D W MISG + A+ L
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F +M G++P F L AC L+ G++L H +V G +V L
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL-HGLVLKLGFSSDTYVCNALVSLYF 334
Query: 445 RAGLLDEAQKLIIDMPMR 462
G L A+ + +M R
Sbjct: 335 HLGNLISAEHIFSNMSQR 352
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 18 CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
C +GF D+ NA++ +Y G +E + F++ D ++W+ ++ + ++G +EAL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
+ M + + S + +E ++K GK +H + + S + +LI
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY--DSETEVCNALIS 735
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
MY KC +++ A F S + VSW +I Y +E + F +M V PN +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 198 ILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
++ ++ C + ++ G + G++ +DM + G A+ +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 257 ENK-DLMICSAMISA 270
K D ++ ++SA
Sbjct: 856 PIKPDALVWRTLLSA 870
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/650 (38%), Positives = 366/650 (56%), Gaps = 8/650 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF DV+V ++I +Y ++ AR LFD+M +D SW+ MI Y ++G EAL L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+R + ++S++ E D G +H Y +++ +S + +S LID+Y
Sbjct: 240 NGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL--ESELFVSNKLIDLYA 293
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ L + VFD ++SW ++I Y I LF +MR + P+ +T++S
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENK 259
L + + + + FTLR G + + + A + MY K G SAR VF+ + N
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMGKWI 318
D++ + +IS YAQ E +++ M + G I N+ T VS+L C++AG+L G +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + K G+ D + TSL DMY KCG ++ LF + + WN +I+ G G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
E A+ LF EM +GV P+ ITF+ L ACSHSGL+ EG+ F M D+G+ P ++HYGC
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MVD+ RAG L+ A K I M ++P+ + G+LL+AC++H NV LG+ A+ +E
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
GY+VL+SN+YA+ KW V +IR G+ K PG SS+EV+ V F G++ HP
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 713
Query: 559 RRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAP 618
+Y + ++ KL +GY PD VL +++ +EKE L HSE+LA+A+ LI+
Sbjct: 714 EEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTT 773
Query: 619 IRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
IRI KNLRVC D H+ T +S+I REIIVRD NRFHHFK G CSC DYW
Sbjct: 774 IRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 206/384 (53%), Gaps = 7/384 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++G ++FV N +I +Y E G L +++FD+M +D +SW+++I+ Y N
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L ++MR++R++P + +IS+ + ++L D++ +++ G+ +R + + + ++
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-KGWFLEDITIGNAV 390
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PN 194
+ MY K + AR+VF+ ++SW T+I+GY +E I ++ M EG I N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+ T +S++ C AL G LH L+NG+ + V + T+ DMYGKCG A +F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
I + + + +I+ + ++ +F +M D G++P+ IT V+LL C+ +G ++
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 315 GKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGC 372
G+W + GI K +VDMY + G ++T + + + D +W ++S C
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 373 AMLGD---GEAALELFVEMEAQGV 393
+ G+ G+ A E E+E + V
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHV 654
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 228/458 (49%), Gaps = 14/458 (3%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR-D 82
++V + ++ +Y +G++ AR FD + ++D +W+ MI YGR G E +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
M + + P S++ ++D G +H ++ V ++ SLI +Y +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD--VYVAASLIHLYSRY 198
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
K + AR +FD + SW MI+GY + N E + L +R + +T++SL+
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLL 254
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
C G +H++++++G+ + ++ ID+Y + G R + VFD + +DL+
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+++I AY +F +M I+P+ +T++SL + ++ G + + + +
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 323 DKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
++G D + ++V MYAK G +D+ +F + D++ WN +ISG A G A
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 382 LELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
+E++ ME +G I N T++ L ACS +G L++G +L +++ + GL V +
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLA 493
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
D+ + G L++A L +P R N+V +L+A H
Sbjct: 494 DMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 171/362 (47%), Gaps = 12/362 (3%)
Query: 101 VFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI 160
+F +L+ K LH ++ ++ V +S L+++Y N+A AR FD +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQI--QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 161 VSWTTMIAGYIHTNNLNEGIRLF-VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+W MI+GY N +E IR F + M G+ P+ T S++K C TV G +H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
L+ G V +A + I +Y + +AR +FD + +D+ +AMIS Y Q+ E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 280 VFDIFVQMNDCGIRP-NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
+ G+R + +T+VSLL C +AG G IHSY K G++ + + L+
Sbjct: 235 ALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 339 DMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
D+YA+ G + ++F RD++ WN +I + A+ LF EM + P+ +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
T I S G ++ + + + + + +V + ++ GL+D A+ +
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 459 MP 460
+P
Sbjct: 410 LP 411
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 324/556 (58%), Gaps = 32/556 (5%)
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
L YA+ VFDGF W MI G+ ++ + L+ +M N T SL+K
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN------ 258
C + A E +HA + G V + I+ Y G+F+ A +FD I
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 259 -------------------------KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
K+ + + MIS Y Q + E +F +M + +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
P+ +++ + L CA+ G+LE GKWIHSY++K I+ D+ L L+DMYAKCG+++ +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F + + W +ISG A G G A+ F+EM+ G+ PN ITF L ACS++GL+
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
+EGK +F+ M D+ L P +EHYGC+VDLL RAGLLDEA++ I +MP++PN V+ G+LL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 474 ACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKE 533
AC++HKN++LGE ++++ + G V +NI+A + KW ++ RR M++ G++K
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 534 PGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMN-IDGEE 592
PG S+I + G+ HEF+ GDR HPE +I MR KL+ GY P++ +L++ +D +E
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDE 544
Query: 593 KETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRN 652
+E ++ HSEKLA+ YGLI PG IRI+KNLRVC D H T L+S+IY R+I++RDR
Sbjct: 545 REAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRT 604
Query: 653 RFHHFKEGSCSCHDYW 668
RFHHF++G CSC DYW
Sbjct: 605 RFHHFRDGKCSCGDYW 620
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 23/377 (6%)
Query: 20 NGFHR-DVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
+GF R D F+ N +I + E + L+ +M+ +A ++ ++++ +
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
E + + + A+ S+I+ +A + KL L + + + S
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN------S 186
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
+I YVK + A ++F + + +SWTTMI+GY+ + E ++LF +M+ V P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+++ + + C + ALE GK +H++ + I + VL IDMY KCG+ A VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+I+ K + +A+IS YA E F++M GI+PN IT ++L C+ G +E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 315 GKWIHSYIDKQGIKRDTKLKTS------LVDMYAKCGDIDTTYRLFAAATDR-DILMWNV 367
GK I ++RD LK + +VD+ + G +D R + + ++W
Sbjct: 367 GKLIF-----YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 368 MISGCAMLGDGEAALEL 384
++ C + + E E+
Sbjct: 422 LLKACRIHKNIELGEEI 438
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 342/574 (59%), Gaps = 48/574 (8%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNE--GIRLFVKM-RREGVIPNEITIL 199
++L YA +F+ + SW T+I G+ ++ I LF +M E V PN T
Sbjct: 73 RDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGI--------------------------------- 226
S++K C ++ GK +H L+ G
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 227 ------------TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+VL ID Y + GD ++AR +FD + + ++ + MIS Y+
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
+ ++F +M IRPN +T+VS+L ++ GSLE+G+W+H Y + GI+ D L
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
++L+DMY+KCG I+ +F +++ W+ MI+G A+ G A++ F +M GV
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
P+D+ +I L ACSH GL++EG+R F +MV GL P++EHYGCMVDLL R+GLLDEA++
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 455 LIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENK 514
I++MP++P++V+ +LL AC++ NV++G+ A + + H G V +SN+YA++
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 515 WGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDN 574
W +VS++R M++ I K+PG S I+++G +HEF++ D HP+ + I ++ E+ +KL
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
Query: 575 VGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNA 634
GY P + VL+N++ E+KE L+YHSEK+A A+GLIS +PG PIRIVKNLR+C+D H++
Sbjct: 553 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 612
Query: 635 TMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
L+S++Y R+I VRDR RFHHF++GSCSC DYW
Sbjct: 613 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 188/417 (45%), Gaps = 71/417 (17%)
Query: 15 RFCCENGFH-RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
RFC + H RD L++A ++F++M ++ SW+T+IR + +
Sbjct: 63 RFCATSDLHHRD----------------LDYAHKIFNQMPQRNCFSWNTIIRGFSES--- 103
Query: 74 DE-----ALDLLRDMRVAR-VKPSEIAMISIIHVFAELVDLKLGKALHGY---------- 117
DE A+ L +M V+P+ S++ A+ ++ GK +HG
Sbjct: 104 DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDE 163
Query: 118 ---------------------------------VMRNRNCGQSGVPLSTSLIDMYVKCKN 144
VM +R + L +ID Y++ +
Sbjct: 164 FVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGD 223
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
AR +FD S+VSW TMI+GY + + +F +M++ + PN +T++S++
Sbjct: 224 CKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPA 283
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
+ +LE G+ LH + +GI I VL +A IDMY KCG A +VF+ + ++++
Sbjct: 284 ISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITW 343
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYID 323
SAMI+ +A + D F +M G+RP+++ ++LL C+ G +E G ++ +
Sbjct: 344 SAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVS 403
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYR-LFAAATDRDILMWNVMISGCAMLGDGE 379
G++ + +VD+ + G +D + D ++W ++ C M G+ E
Sbjct: 404 VDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 59/334 (17%)
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS-----ARYV 252
+ + C T+ L +HA +++G + LA A I + D A +
Sbjct: 26 LFPQINNCRTIRDLS---QIHAVFIKSG-QMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDI---FVQMNDCGIRPNEITMVSLLVLCAKA 309
F+ + ++ + +I +++++ + I + M+D + PN T S+L CAK
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF---------AAATDR 360
G ++ GK IH K G D + ++LV MY CG + LF TDR
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 361 -----DILMWNVMISGCAMLGDGEA-------------------------------ALEL 384
+I++WNVMI G LGD +A A+E+
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F EM+ + PN +T + L A S G L+ G+ L H D G+ ++D+ S
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL-HLYAEDSGIRIDDVLGSALIDMYS 320
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
+ G++++A + +P R N + +++ +H
Sbjct: 321 KCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/712 (34%), Positives = 380/712 (53%), Gaps = 70/712 (9%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R F N ++ Y + G ++ + FD++ +D+VSW+TMI Y G +A+ ++ DM
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPLSTSLIDMYVKC 142
++P++ + +++ A ++ GK +H ++++ G G V +S SL++MY KC
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK---LGLRGNVSVSNSLLNMYAKC 194
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN------------------------- 177
+ A+ VFD I SW MIA ++ ++
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 178 ------EGIRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
+ +F KM R+ ++ P+ T+ S++ C +E L GK +H+ + G IS
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 231 VLATAFIDMYGKCG---------------------------------DFRSARYVFDSIE 257
++ A I MY +CG D A+ +F S++
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
++D++ +AMI Y Q E ++F M G RPN T+ ++L + + SL GK
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGCAMLG 376
IH K G + +L+ MYAK G+I + R F +RD + W MI A G
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
E ALELF M +G+ P+ IT++G AC+H+GL+ +G++ F M ++P + HY
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
CMVDL RAGLL EAQ+ I MP+ P+ V GSLL+AC++HKN+ LG+ AA + L LE
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 497 HKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHP 556
G ++N+Y+A KW + + IR++M+D + KE G S IEV VH F + D HP
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 557 ETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPG 616
E IY + ++ +++ +GY PD ++VL +++ E KE L +HSEKLA+A+GLIS
Sbjct: 675 EKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDK 734
Query: 617 APIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+RI+KNLRVC+D H A +S++ GREIIVRD RFHHFK+G CSC DYW
Sbjct: 735 TTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 40/419 (9%)
Query: 14 ARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
A+F + RD+ NA+I ++ +VG ++ A F++M ++D V+W++MI + + G
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 74 DEALDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN----------- 121
ALD+ M R + + P + S++ A L L +GK +H +++
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 122 -----RNCG----------QSG-----VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
CG Q G + T+L+D Y+K ++ A+++F +V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+WT MI GY + E I LF M G PN T+ +++ ++ +L GK +H
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-NKDLMICSAMISAYAQTNCIDEV 280
+++G SV ++ A I MY K G+ SA FD I +D + ++MI A AQ +E
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 281 FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGK-WIHSYIDKQGIKRDTKLKTSLVD 339
++F M G+RP+ IT V + C AG + G+ + D I +VD
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 340 MYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAM-----LGDGEAALELFVEMEAQG 392
++ + G + + D++ W ++S C + LG A L +E E G
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 182/440 (41%), Gaps = 77/440 (17%)
Query: 109 KLGKALHGYVMRNRNCGQSGVPLST-----SLIDMYVKCKNLAYARSVFDGFSGASIVSW 163
K G ALH + + +PL T +++ Y K ++ FD VSW
Sbjct: 61 KTGYALHARKLFDE------MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSW 114
Query: 164 TTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
TTMI GY + ++ IR+ M +EG+ P + T+ +++ +E GK +H+F ++
Sbjct: 115 TTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID----- 278
G+ +V ++ + ++MY KCGD A++VFD + +D+ +AMI+ + Q +D
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 279 --------------------------EVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGS 311
DIF +M D + P+ T+ S+L CA
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL------------------ 353
L +GK IHS+I G + +L+ MY++CG ++T RL
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 354 ---------------FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
F + DRD++ W MI G G A+ LF M G PN
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
T L S L GK++ V G + V ++ + ++AG + A +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 459 MPMRPNNVVLGSLLAACKLH 478
+ + V S++ A H
Sbjct: 474 IRCERDTVSWTSMIIALAQH 493
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 358/648 (55%), Gaps = 4/648 (0%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
H D F+ N ++ +++ LF + ++++I + N L E LDL
Sbjct: 41 LHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFL 100
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYV 140
+R + ++ KLG LH V++ CG V TSL+ +Y
Sbjct: 101 SIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK---CGFNHDVAAMTSLLSIYS 157
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
L A +FD S+V+WT + +GY + E I LF KM GV P+ I+
Sbjct: 158 GSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQ 217
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C V L+ G+ + + + + + T +++Y KCG AR VFDS+ KD
Sbjct: 218 VLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
++ S MI YA + E ++F+QM ++P++ ++V L CA G+L++G+W S
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
ID+ + + +L+DMYAKCG + + +F ++DI++ N ISG A G +
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKL 397
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
+ +F + E G+ P+ TF+G L C H+GL+Q+G R F+ + + L VEHYGCMV
Sbjct: 398 SFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMV 457
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
DL RAG+LD+A +LI DMPMRPN +V G+LL+ C+L K+ +L E + ++LE G
Sbjct: 458 DLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAG 517
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
V +SNIY+ +W + +++R M G+ K PG S IE+ G VHEF+ D+ HP + +
Sbjct: 518 NYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDK 577
Query: 561 IYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIR 620
IY + ++ ++ +G+ P V +++ EEKE L YHSEKLA+A GLIS G IR
Sbjct: 578 IYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIR 637
Query: 621 IVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+VKNLRVC D H L+S+I REI+VRD NRFH F GSCSC+DYW
Sbjct: 638 VVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 194/372 (52%), Gaps = 4/372 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF+ DV +++ +Y G L A +LFD++ D+ V+W+ + Y +G EA+DL
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+ M VKP ++ ++ + DL G+ + Y+ Q + T+L+++Y
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM--QKNSFVRTTLVNLYA 258
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC + ARSVFD IV+W+TMI GY + EGI LF++M +E + P++ +I+
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+ C ++ AL+ G+ + R+ ++ +A A IDMY KCG VF ++ KD
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIH 319
++I +A IS A+ + F +F Q GI P+ T + LL C AG ++ G ++ +
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDG 378
+ +KR + +VD++ + G +D YRL R + ++W ++SGC ++ D
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 379 EAALELFVEMEA 390
+ A + E+ A
Sbjct: 499 QLAETVLKELIA 510
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
++ E ++ FV ++ +Y + G +E AR +FD MV+KD V+WSTMI+ Y N
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
E ++L M +KP + +++ + A L L LG+ G + +R+ + + ++ +
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANA 353
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LIDMY KC +A VF IV I+G ++ +F + + G+ P+
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 195 EITILSLVKECGTVEA--LEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA-R 250
T L L+ CG V A ++ G + +A + + +V +D++G+ G A R
Sbjct: 414 GSTFLGLL--CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 251 YVFDSIENKDLMICSAMISA 270
+ D + ++ A++S
Sbjct: 472 LICDMPMRPNAIVWGALLSG 491
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/659 (37%), Positives = 369/659 (55%), Gaps = 18/659 (2%)
Query: 22 FHRDVFV-CNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
F DV V C+ I M S E A ++FDKM + + V+W+ MI + G EA+
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV--PLSTSLIDM 138
DM ++ + + + S+ AEL +L LGK LH + +R SG+ + SL+DM
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR------SGLVDDVECSLVDM 311
Query: 139 YVKCK---NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL-NEGIRLFVKMRREG-VIP 193
Y KC ++ R VFD S++SWT +I GY+ NL E I LF +M +G V P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
N T S K CG + GK + + G+ + +A + I M+ K A+ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+S+ K+L+ + + + ++ F + ++ + + + T SLL A GS+
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
G+ IHS + K G+ + + +L+ MY+KCG IDT R+F +R+++ W MI+G A
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
G LE F +M +GV PN++T++ L ACSH GL+ EG R F+ M D + PK+
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
EHY CMVDLL RAGLL +A + I MP + + +V + L AC++H N +LG+ AA + L
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE 671
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR 553
L+ ++ + +SNIYA KW + +++RR M++ + KE G S IEV +H+F +GD
Sbjct: 672 LDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDT 731
Query: 554 EHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETA----LNYHSEKLAMAYG 609
HP +IY+ + + ++ GY PD VL ++ E E L HSEK+A+A+G
Sbjct: 732 AHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFG 791
Query: 610 LISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
LIS + P+R+ KNLRVC D HNA +S + GREI++RD NRFHHFK+G CSC+DYW
Sbjct: 792 LISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 217/447 (48%), Gaps = 13/447 (2%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMV---DKDAVSWSTMIRNYGRNGLLDEALDLLR 81
D + N++I +Y + G A +F+ M +D VSWS M+ YG NG +A+ +
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
+ + P++ ++I + + +G+ G++M+ + +S V + SLIDM+VK
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF-ESDVCVGCSLIDMFVK 214
Query: 142 CKN-LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+N A VFD S ++V+WT MI + E IR F+ M G ++ T+ S
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC---GDFRSARYVFDSIE 257
+ C +E L GK LH++ +R+G+ V + +DMY KC G R VFD +E
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 258 NKDLMICSAMISAYAQT-NCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMG 315
+ +M +A+I+ Y + N E ++F +M G + PN T S C +G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
K + K+G+ ++ + S++ M+ K ++ R F + ++++++ +N + G
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
+ E A +L E+ + + + TF L ++ G +++G+++ H V GL
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI-HSQVVKLGLSCNQPV 511
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMR 462
++ + S+ G +D A ++ M R
Sbjct: 512 CNALISMYSKCGSIDTASRVFNFMENR 538
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 191/394 (48%), Gaps = 27/394 (6%)
Query: 76 ALDLL-RDMRVARVKPSE-IAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
ALDL+ RD ++P + + S++ D +LGK +H ++ + L
Sbjct: 48 ALDLMARD----GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDI--EPDSVLYN 101
Query: 134 SLIDMYVKCKNLAYARSVFDG---FSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
SLI +Y K + A A VF+ F +VSW+ M+A Y + + I++FV+ G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKC-GDFRS 248
++PN+ ++++ C + + G++ F ++ G V + + IDM+ K F +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
A VFD + +++ + MI+ Q E F+ M G ++ T+ S+ CA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC---GDIDTTYRLFAAATDRDILMW 365
+L +GK +HS+ + G+ D ++ SLVDMYAKC G +D ++F D ++ W
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 366 NVMISG----CAMLGDGEAALELFVEMEAQG-VIPNDITFIGALKACSHSGLLQEGKRLF 420
+I+G C + + A+ LF EM QG V PN TF A KAC + + GK++
Sbjct: 340 TALITGYMKNCNLATE---AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
+ GL ++ + ++ +++AQ+
Sbjct: 397 GQAFKR-GLASNSSVANSVISMFVKSDRMEDAQR 429
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 179/401 (44%), Gaps = 44/401 (10%)
Query: 20 NGFHRDVFVCNAIIMMYGEV------------------------------------GSLE 43
+GF D F +++ E+ GS++
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVD 322
Query: 44 FARQLFDKMVDKDAVSWSTMIRNYGRN-GLLDEALDLLRDM-RVARVKPSEIAMISIIHV 101
R++FD+M D +SW+ +I Y +N L EA++L +M V+P+ S
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 102 FAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
L D ++GK + G + S V + S+I M+VK + A+ F+ S ++V
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSV--ANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
S+ T + G N + +L ++ + + T SL+ V ++ G+ +H+
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
++ G++ + + A I MY KCG +A VF+ +EN++++ ++MI+ +A+ V
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH--SYIDKQGIKRDTKLKTSLVD 339
+ F QM + G++PNE+T V++L C+ G + G W H S + IK + +VD
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 340 MYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGDGE 379
+ + G + + D+L+W + C + + E
Sbjct: 620 LLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 356/656 (54%), Gaps = 5/656 (0%)
Query: 16 FCCENGFHRDVF--VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
F + GF + F V N ++ Y EV L+ A LF+++ +KD+V+++T+I Y ++GL
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
E++ L MR + +PS+ ++ L D LG+ LH + + V
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV--GN 289
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
++D Y K + R +FD VS+ +I+ Y + + F +M+ G
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+++ + +L+ G+ LH L + + + +DMY KC F A +F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
S+ + + +A+IS Y Q +F +M +R ++ T ++L A SL
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
+GK +H++I + G + + LVDMYAKCG I ++F DR+ + WN +IS A
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
GDGEAA+ F +M G+ P+ ++ +G L ACSH G +++G F M +G+ PK
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
+HY CM+DLL R G EA+KL+ +MP P+ ++ S+L AC++HKN L E AA + S
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 494 LESHK-CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGD 552
+E + V MSNIYAA +W V D+++AMR+ GI K P S +EVN +H F D
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 553 REHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLIS 612
+ HP I + E+ +++ GY PD S+V+ ++D + K +L YHSE+LA+A+ LIS
Sbjct: 710 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769
Query: 613 VAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
G PI ++KNLR C D H A L+S+I REI VRD +RFHHF EG CSC DYW
Sbjct: 770 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 211/474 (44%), Gaps = 7/474 (1%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
H++ N +I + + G + AR LFD M D+ V+W+ ++ Y RN DEA L R
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 83 M--RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M + P + +++ + V +H + ++ + +S L+ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ + L A +F+ V++ T+I GY E I LF+KMR+ G P++ T
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++K + G+ LHA ++ G + + +D Y K R +FD + D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + +IS+Y+Q + + F +M G ++L + A SL+MG+ +H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ SLVDMYAKC + +F + R + W +ISG G A
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
L+LF +M + + TF LKA + L GK+L H + G + V +V
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL-HAFIIRSGNLENVFSGSGLV 494
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSL 494
D+ ++ G + +A ++ +MP R N V +L++A H + GE A G F +
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA---HADNGDGEAAIGAFAKM 544
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/676 (34%), Positives = 364/676 (53%), Gaps = 35/676 (5%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM- 83
++F N +++ Y + G + F+K+ D+D V+W+ +I Y +GL+ A+ M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKC 142
R + + +++++ + + + LGK +HG V++ G +S + + + L+ MY
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK---LGFESYLLVGSPLLYMYANV 187
Query: 143 KNLAYARSVFDG----------------------------FSG--ASIVSWTTMIAGYIH 172
++ A+ VF G F G VSW MI G
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 173 TNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
E I F +M+ +G+ ++ S++ CG + A+ GK +HA +R + +
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
+A IDMY KC A+ VFD ++ K+++ +AM+ Y QT +E IF+ M GI
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 293 RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
P+ T+ + CA SLE G H G+ + SLV +Y KCGDID + R
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 353 LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
LF RD + W M+S A G ++LF +M G+ P+ +T G + ACS +GL
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLL 472
+++G+R F M ++G+VP + HY CM+DL SR+G L+EA + I MP P+ + +LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 473 AACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISK 532
+AC+ N+++G+WAA + L+ H L+S+IYA++ KW V+ +RR MR+ + K
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 533 EPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEE 592
EPG S I+ G +H F D P +IY + E+ K+ + GY PD S V +++
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAV 667
Query: 593 KETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRN 652
K LNYHSE+LA+A+GLI V G PIR+ KNLRVC D HNAT +S + GREI+VRD
Sbjct: 668 KVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAV 727
Query: 653 RFHHFKEGSCSCHDYW 668
RFH FK+G+CSC D+W
Sbjct: 728 RFHRFKDGTCSCGDFW 743
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 65/413 (15%)
Query: 112 KALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
K +HG ++R ++ L +++ Y K+ YAR VFD ++ SW ++ Y
Sbjct: 26 KMIHGNIIRALPYPETF--LYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 172 HTNNLNEGIRLFVKMR-REGVIPN-------------------------------EITIL 199
++E F K+ R+GV N +T++
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+++K + + GK +H ++ G +++ + + MY G A+ VF ++++
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 260 D----------LMIC--------------------SAMISAYAQTNCIDEVFDIFVQMND 289
+ L+ C +AMI AQ E + F +M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
G++ ++ S+L C G++ GK IH+ I + + + ++L+DMY KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+F ++++ W M+ G G E A+++F++M+ G+ P+ T A+ AC++
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L+EG + FH GL+ V +V L + G +D++ +L +M +R
Sbjct: 384 VSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 152/350 (43%), Gaps = 54/350 (15%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F ++V +A+I MY + L +A+ +FD+M K+ VSW+ M+ YG+ G +EA+ +
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG----VPLSTSLID 137
DM+ + + P + I A + L+ G HG + SG V +S SL+
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI------TSGLIHYVTVSNSLVT 414
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
+Y KC ++ + +F+ + VSWT M++ Y E I+LF KM + G+ P+ +T
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 198 ILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA-RYVFDS 255
+ ++ C +E G + T GI S+ + ID++ + G A R++
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI--- 531
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
N P+ I +LL C G+LE+G
Sbjct: 532 --------------------------------NGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 316 KWIHSYIDKQGIKRDTKLK---TSLVDMYAKCGDIDTTYRLFAAATDRDI 362
KW + I+ D T L +YA G D+ +L ++++
Sbjct: 560 KWAAESL----IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 7 ISARTRGARF---CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM 63
+S+ G++F +G V V N+++ +YG+ G ++ + +LF++M +DAVSW+ M
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVF--AELVD-----LKLGKALHG 116
+ Y + G E + L M +KP + + +I A LV+ KL + +G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNN 175
V + + +ID++ + L A +G + WTT+++ + N
Sbjct: 504 IV--------PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 176 LNEG 179
L G
Sbjct: 556 LEIG 559
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 330/540 (61%), Gaps = 41/540 (7%)
Query: 166 MIAGYIHTNNLN----EGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+ I+T ++N + L+V++ + PNE T SL+K C T + GKL+H
Sbjct: 97 LFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHV 152
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
L+ G+ I +AT +D+Y K GD SA+ VFD + + L+ +AMI+ YA+ ++
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 212
Query: 282 DIFVQM---------------------NDCGI-----------RPNEITMVSLLVLCAKA 309
+F M ND + +P+EIT+V+ L C++
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
G+LE G+WIH ++ I+ + K+ T L+DMY+KCG ++ +F +DI+ WN MI
Sbjct: 273 GALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 332
Query: 370 SGCAMLGDGEAALELFVEMEA-QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
+G AM G + AL LF EM+ G+ P DITFIG L+AC+H+GL+ EG R+F M ++G
Sbjct: 333 AGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYG 392
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA 488
+ PK+EHYGC+V LL RAG L A + I +M M ++V+ S+L +CKLH + LG+ A
Sbjct: 393 IKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 489 GQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEF 548
+ L G VL+SNIYA+ + V+ +R M++ GI KEPG+S+IE+ VHEF
Sbjct: 453 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 512
Query: 549 IMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAY 608
GDREH +++ IY ++ ++ E++ + GY P+ + VL +++ EKE +L HSE+LA+AY
Sbjct: 513 RAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAY 572
Query: 609 GLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
GLIS PG+P++I KNLRVC D H T L+S+I GR+I++RDRNRFHHF +GSCSC D+W
Sbjct: 573 GLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 171/378 (45%), Gaps = 43/378 (11%)
Query: 36 YGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAM 95
Y G + + LF + +D D ++ I NGL D+A L + + + P+E
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 96 ISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTSLIDMYVK------------- 141
S++ + K GK +H +V++ G P ++T L+D+Y K
Sbjct: 134 SSLL----KSCSTKSGKLIHTHVLK---FGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 142 --------------C----KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF 183
C N+ AR++FD IVSW MI GY N+ + LF
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 184 VKMRREG-VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGK 242
K+ EG P+EIT+++ + C + ALE G+ +H F + I ++V + T IDMY K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 243 CGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND-CGIRPNEITMVS 301
CG A VF+ KD++ +AMI+ YA + +F +M G++P +IT +
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-D 359
L CA AG + G I + ++ GIK + LV + + G + Y D
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 360 RDILMWNVMISGCAMLGD 377
D ++W+ ++ C + GD
Sbjct: 427 ADSVLWSSVLGSCKLHGD 444
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 217 LHAFTLRNGITISV---VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQ 273
+HA LR+ + + VL Y G R + +F + DL + +A I+ +
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
D+ F ++VQ+ I PNE T SLL C S + GK IH+++ K G+ D +
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYV 163
Query: 334 KTSLVDMYAKCGDIDTTYR-------------------------------LFAAATDRDI 362
T LVD+YAK GD+ + + LF + +RDI
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQG-VIPNDITFIGALKACSHSGLLQEGKRLFH 421
+ WNVMI G A G AL LF ++ A+G P++IT + AL ACS G L+ G R H
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG-RWIH 282
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
V + V+ ++D+ S+ G L+EA + D P R + V +++A +H
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMH 338
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 40/328 (12%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R + A+I Y + G++E AR LFD M ++D VSW+ MI Y ++G ++AL L + +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 84 RV-ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
+ KP EI +++ + +++ L+ G+ +H +V +R + V + T LIDMY KC
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI--RLNVKVCTGLIDMYSKC 307
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEITILSL 201
+L A VF+ IV+W MIAGY + +RLF +M+ G+ P +IT +
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 202 VKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C + G ++ + GI + + + G+ G + A +++I+N +
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMN 424
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ S + S S+L C G +GK I
Sbjct: 425 MDADSVLWS-------------------------------SVLGSCKLHGDFVLGKEIAE 453
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDID 348
Y+ IK ++ + L ++YA GD +
Sbjct: 454 YLIGLNIK-NSGIYVLLSNIYASVGDYE 480
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGI---KRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
L VL K+ S++ IH+ I + + R L L YA G I + LF
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 359 DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKR 418
D D+ ++ I+ ++ G + A L+V++ + + PN+ TF LK+CS + +
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS-----TKSGK 146
Query: 419 LFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L H V FGL +VD+ ++ G + AQK+ MP R
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER 190
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/638 (36%), Positives = 374/638 (58%), Gaps = 4/638 (0%)
Query: 32 IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPS 91
++ MY + AR++FD+M +D+VS++TMI Y + +++E++ + + + + KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPD 306
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSV 151
+ + S++ L DL L K ++ Y+++ +S V LID+Y KC ++ AR V
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV--RNILIDVYAKCGDMITARDV 364
Query: 152 FDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEAL 211
F+ VSW ++I+GYI + +L E ++LF M + IT L L+ + L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 212 EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAY 271
+FGK LH+ +++GI I + ++ A IDMY KCG+ + +F S+ D + + +ISA
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
+ + QM + P+ T + L +CA + +GK IH + + G + +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
++ +L++MY+KCG ++ + R+F + RD++ W MI M G+GE ALE F +ME
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
G++P+ + FI + ACSHSGL+ EG F KM + + P +EHY C+VDLLSR+ + +
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 452 AQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAA 511
A++ I MP++P+ + S+L AC+ +++ E + + + L GY++L SN YAA
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Query: 512 ENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREK 571
KW VS IR++++D I+K PG S IEV +VH F GD P++ IY+ + +
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSL 784
Query: 572 LDNVGYTPDISAVLMNI-DGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDD 630
+ GY PD V N+ + EEK + HSE+LA+A+GL++ PG P++++KNLRVC D
Sbjct: 785 MAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGD 844
Query: 631 YHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
H T L+S+I GREI+VRD NRFH FK+G+CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 243/442 (54%), Gaps = 4/442 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D+FV NA++ MY +G L ARQ+FD+M +D VSW+++I Y +G +EAL++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+++ + + P + S++ F L+ +K G+ LHG+ +++ S V ++ L+ MY+
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV--NSVVVVNNGLVAMYL 253
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K + AR VFD VS+ TMI GY+ + E +R+F++ + P+ +T+ S
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSS 312
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+++ CG + L K ++ + L+ G + + ID+Y KCGD +AR VF+S+E KD
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +++IS Y Q+ + E +F M + + IT + L+ + + L+ GK +HS
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
K GI D + +L+DMYAKCG++ + ++F++ D + WN +IS C GD
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
L++ +M V+P+ TF+ L C+ + GK + H + FG +++ ++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI-HCCLLRFGYESELQIGNALI 551
Query: 441 DLLSRAGLLDEAQKLIIDMPMR 462
++ S+ G L+ + ++ M R
Sbjct: 552 EMYSKCGCLENSSRVFERMSRR 573
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 231/445 (51%), Gaps = 12/445 (2%)
Query: 55 KDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKAL 114
K+ W+++IR + +NGL EAL+ +R ++V P + S+I A L D ++G +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 115 HGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
+ ++ + G +S + + +L+DMY + L AR VFD +VSW ++I+GY
Sbjct: 129 YEQIL---DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
E + ++ +++ ++P+ T+ S++ G + ++ G+ LH F L++G+ VV+
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
+ MY K AR VFD ++ +D + + MI Y + ++E +F++ D +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFK 304
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
P+ +T+ S+L C L + K+I++Y+ K G ++ ++ L+D+YAKCGD+ T +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F + +D + WN +ISG GD A++LF M + IT++ + + L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
+ GK L + G+ + ++D+ ++ G + ++ K+ M + V ++++
Sbjct: 425 KFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVIS 482
Query: 474 ACKLHKNVKLGEWAAGQFLSLESHK 498
AC V+ G++A G ++ + K
Sbjct: 483 AC-----VRFGDFATGLQVTTQMRK 502
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 12/368 (3%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGA-SIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
S LID Y + A + SVF S A ++ W ++I + E + + K+R
Sbjct: 41 FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES 100
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
V P++ T S++K C + E G L++ L G + + A +DMY + G A
Sbjct: 101 KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRA 160
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
R VFD + +DL+ +++IS Y+ +E +I+ ++ + I P+ T+ S+L
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
++ G+ +H + K G+ + LV MY K R+F RD + +N MI
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
G L E ++ +F+E Q P+ +T L+AC H L K +++ M+ G
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GF 338
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP----NNVV-----LGSLLAACKLHKN 480
V + ++D+ ++ G + A+ + M + N+++ G L+ A KL K
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 481 VKLGEWAA 488
+ + E A
Sbjct: 399 MMIMEEQA 406
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 329/559 (58%), Gaps = 33/559 (5%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG--VIPNEITILS 200
K L YA + D ++ + +MI + + + + ++ G + P+ T+
Sbjct: 54 KYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNF 113
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYG------------------- 241
LV+ C + E G +H T+R G + T I +Y
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 242 ------------KCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
+CGD AR +F+ + +D + +AMIS YAQ E ++F M
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
G++ N + M+S+L C + G+L+ G+W HSYI++ IK +L T+LVD+YAKCGD++
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+F ++++ W+ ++G AM G GE LELF M+ GV PN +TF+ L+ CS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
G + EG+R F M ++FG+ P++EHYGC+VDL +RAG L++A +I MPM+P+ V
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
SLL A +++KN++LG A+ + L LE+ G VL+SNIYA N W +VS +R++M+ G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
+ K+PG S +EVNG VHEF +GD+ HP+ +I + ++ +L GY D + V+ +ID
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 590 GEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVR 649
EEKE AL HSEK A+A+G++S+ PIRIVKNLRVC D H +M++S+I+ REIIVR
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 650 DRNRFHHFKEGSCSCHDYW 668
DRNRFHHFK+G CSC+ +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 164/339 (48%), Gaps = 32/339 (9%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA--RVKPSEIAMISII 99
L++A Q+ D+ + ++MIR + ++ + +++ D R + + +KP + ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 100 HVFAELVDLKLGKALHGYVMR----NRNCGQSG--------------------VPLS--- 132
L + G +HG +R N Q+G +P
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 133 --TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
T+++ +C ++ +AR +F+G ++W MI+GY E + +F M+ EG
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V N + ++S++ C + AL+ G+ H++ RN I I+V LAT +D+Y KCGD A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VF +E K++ S+ ++ A ++ ++F M G+ PN +T VS+L C+ G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 311 SLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID 348
++ G + S ++ GI+ + LVD+YA+ G ++
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 27 FVC-NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
FVC A++ G + FAR+LF+ M ++D ++W+ MI Y + G EAL++ M++
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
VK + +AMIS++ +L L G+ H Y+ RN+ + V L+T+L+D+Y KC ++
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKI--KITVRLATTLVDLYAKCGDM 291
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
A VF G ++ +W++ + G + + LF M+++GV PN +T +S+++ C
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 206 GTVEALEFGKLLHAFTLRN--GITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
V ++ G+ H ++RN GI + +D+Y + G A + + K
Sbjct: 352 SVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/608 (38%), Positives = 351/608 (57%), Gaps = 53/608 (8%)
Query: 108 LKLGKALHGYVMRNRNCGQSGVP---LSTSLIDMYVKCKNLAYARSVFD--GFSGASIVS 162
L+ GK LH + + G P LS +L Y + A+ +FD S V
Sbjct: 22 LRPGKELHAVLTTS---GLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVD 78
Query: 163 WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTL 222
WTT+++ + L ++LFV+MRR+ V ++++++ L C +E L F + H +
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM-------------------- 262
+ G+ SV + A +DMYGKCG + +F+ +E K ++
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 263 -----------ICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAG 310
+ M++ Y EV ++ +M CG N +T+ S+L CA++G
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 311 SLEMGKWIHSYIDKQGIKR-------DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL 363
+L +G+W+H Y K+ + D + T+LVDMYAKCG+ID++ +F R+++
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
WN + SG AM G G +++F +M + V P+D+TF L ACSHSG++ EG R FH +
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKL 483
+GL PKV+HY CMVDLL RAGL++EA+ L+ +MP+ PN VVLGSLL +C +H V++
Sbjct: 378 -RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEI 436
Query: 484 GEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSD-IRRAMRDAGISKEPGVSSIEVN 542
E + + + Y +LMSN+Y AE + D++D +R ++R GI K PG+SSI VN
Sbjct: 437 AERIKRELIQMSPGNTEYQILMSNMYVAEGR-SDIADGLRGSLRKRGIRKIPGLSSIYVN 495
Query: 543 GSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDG--EEKETALNYH 600
SVH F GDR HP T+ IY + E+ E++ + GY PD+S ++ + +G EEKE AL H
Sbjct: 496 DSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCH 555
Query: 601 SEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEG 660
SEKLA+ +GL+ P P+ + KNLR+C D H+A ++S++Y REII+RDRNRFH FK G
Sbjct: 556 SEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGG 615
Query: 661 SCSCHDYW 668
SCSC DYW
Sbjct: 616 SCSCSDYW 623
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 173/363 (47%), Gaps = 44/363 (12%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDK--MVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
++ NA+ Y G + A++LFD+ + +KD V W+T++ ++ R GLL ++ L +MR
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
RV+ +++++ + V A+L DL + HG ++ + V + +L+DMY KC
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL--TSVKVCNALMDMYGKCGL 161
Query: 145 LAYARSVFDGFSGASIVS-------------------------------WTTMIAGYIHT 173
++ + +F+ S+VS WT M+AGY+
Sbjct: 162 VSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGA 221
Query: 174 NNLNEGIRLFVKMR-REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS--- 229
E + L +M R G N +T+ S++ C L G+ +H + L+ + +
Sbjct: 222 GFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 230 ----VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
V++ TA +DMY KCG+ S+ VF + ++++ +A+ S A V D+F
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP 341
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
QM ++P+++T ++L C+ +G ++ G + G++ +VD+ + G
Sbjct: 342 QMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAG 400
Query: 346 DID 348
I+
Sbjct: 401 LIE 403
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 158/381 (41%), Gaps = 77/381 (20%)
Query: 21 GFHRDVFVCNAIIMMYGEVG-------------------------------SLEFARQLF 49
G V VCNA++ MYG+ G LE R++F
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 50 DKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKP--SEIAMISIIHVFAELVD 107
+M +++AV+W+ M+ Y G E L+LL +M V R + + + S++ A+ +
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM-VFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 108 LKLGKALHGYVMRN-----RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVS 162
L +G+ +H Y ++ V + T+L+DMY KC N+ + +VF ++V+
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 163 WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTL 222
W + +G I +F +M RE V P+++T +++ C
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS---------------- 362
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMISAYAQTNCIDEVF 281
+ +D +C F S R F +E K D C M+ + I+E
Sbjct: 363 ----------HSGIVDEGWRC--FHSLR--FYGLEPKVDHYAC--MVDLLGRAGLIEEA- 405
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
+ M + + PNE+ + SLL C+ G +E+ + I + Q +T+ + + +MY
Sbjct: 406 --EILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL-IQMSPGNTEYQILMSNMY 462
Query: 342 AKCGDIDTTYRLFAAATDRDI 362
G D L + R I
Sbjct: 463 VAEGRSDIADGLRGSLRKRGI 483
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK--LKTSLVDMYAKCGDIDTTYRLF--AAA 357
LL CA L GK +H+ + G+K+ + L +L YA G++ T +LF
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 358 TDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH---SGLLQ 414
+++D + W ++S + G +++LFVEM + V +D++ + C+ G Q
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+G H + G++ V+ ++D+ + GL+ E +++ ++
Sbjct: 132 QG----HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEEL 172
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 368/648 (56%), Gaps = 5/648 (0%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
+++ + NA++ MY + G + A+ +F +K+ VSW+TM+ + G D+LR M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 84 RVA--RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
VK E+ +++ + V L K LH Y ++ V + + + Y K
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV--ANAFVASYAK 442
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
C +L+YA+ VF G ++ SW +I G+ +N+ + ++M+ G++P+ T+ SL
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ C +++L GK +H F +RN + + + + + +Y CG+ + + +FD++E+K L
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ + +I+ Y Q D +F QM GI+ I+M+ + C+ SL +G+ H+Y
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
K ++ D + SL+DMYAK G I + ++F ++ WN MI G + G + A
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
++LF EM+ G P+D+TF+G L AC+HSGL+ EG R +M FGL P ++HY C++D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 442 LLSRAGLLDEAQKLII-DMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
+L RAG LD+A +++ +M + + SLL++C++H+N+++GE A + LE K
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
VL+SN+YA KW DV +R+ M + + K+ G S IE+N V F++G+R
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEE 862
Query: 561 IYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIR 620
I + + + K+ +GY PD +V ++ EEK L HSEKLA+ YGLI + G IR
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIR 922
Query: 621 IVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+ KNLR+C D HNA L+S++ REI+VRD RFHHFK G CSC DYW
Sbjct: 923 VYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 232/448 (51%), Gaps = 17/448 (3%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G DVFV NA++ YG G + A QLFD M +++ VSW++MIR + NG +E+
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 79 LLRDMRVAR----VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
LL +M P +++++ V A ++ LGK +HG+ ++ R + L+ +
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL--DKELVLNNA 332
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR--EGVI 192
L+DMY KC + A+ +F + ++VSW TM+ G+ + + + +M E V
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
+E+TIL+ V C L K LH ++L+ + ++A AF+ Y KCG A+ V
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F I +K + +A+I +AQ+N D +QM G+ P+ T+ SLL C+K SL
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
+GK +H +I + ++RD + S++ +Y CG++ T LF A D+ ++ WN +I+G
Sbjct: 513 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
G + AL +F +M G+ I+ + ACS L+ G+ H + L
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHL 627
Query: 433 VE---HYGC-MVDLLSRAGLLDEAQKLI 456
+E C ++D+ ++ G + ++ K+
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVF 655
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 196/431 (45%), Gaps = 23/431 (5%)
Query: 4 HTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM 63
H +S TR D +C II MY GS + +R +FD + K+ W+ +
Sbjct: 107 HQLVSGSTR---------LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 64 IRNYGRNGLLDEALDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR 122
I +Y RN L DE L+ +M + P +I A + D+ +G A+HG V++
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 123 NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
V + +L+ Y + A +FD ++VSW +MI + E L
Sbjct: 218 LV--EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 183 FVKMRRE----GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
+M E +P+ T+++++ C + GK +H + ++ + +VL A +D
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 239 MYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG--IRPNE 296
MY KCG +A+ +F NK+++ + M+ ++ FD+ QM G ++ +E
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA 356
+T+++ + +C L K +H Y KQ + + + V YAKCG + R+F
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 357 ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEG 416
+ + WN +I G A D +L+ ++M+ G++P+ T L ACS L+ G
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 417 KRLFHKMVHDF 427
K VH F
Sbjct: 516 KE-----VHGF 521
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 16/370 (4%)
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELV-------DLKLGKALHG 116
I N+ G LD++ +++ V + S A + + L+ D+++G+ +H
Sbjct: 50 ISNFCETGDLDKSFRTVQEF-VGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ 108
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
V + V L T +I MY C + +R VFD ++ W +I+ Y
Sbjct: 109 LVSGSTRLRNDDV-LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELY 167
Query: 177 NEGIRLFVKM-RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
+E + F++M ++P+ T ++K C + + G +H ++ G+ V + A
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA 227
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM----NDCG 291
+ YG G A +FD + ++L+ ++MI ++ +E F + +M D
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
P+ T+V++L +CA+ + +GK +H + K + ++ L +L+DMY+KCG I
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 352 RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG--VIPNDITFIGALKACSH 409
+F +++++ WN M+ G + GD ++ +M A G V +++T + A+ C H
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 410 SGLLQEGKRL 419
L K L
Sbjct: 408 ESFLPSLKEL 417
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 5/258 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F N RD+FV +++ +Y G L + LFD M DK VSW+T+I Y +NG D
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL + R M + ++ I+M+ + + L L+LG+ H Y + ++ + ++ SL
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL--KHLLEDDAFIACSL 638
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
IDMY K ++ + VF+G S SW MI GY E I+LF +M+R G P++
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 196 ITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA-RYVF 253
+T L ++ C + G + L G+ ++ IDM G+ G A R V
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 254 DSI-ENKDLMICSAMISA 270
+ + E D+ I +++S+
Sbjct: 759 EEMSEEADVGIWKSLLSS 776
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 360/652 (55%), Gaps = 14/652 (2%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
V + N ++ MY + GS+ AR++F M DKD+VSW++MI +NG EA++ + MR
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLSTSLIDMYVKC 142
+ P +IS + A L KLG+ +HG ++ + N V +S +L+ +Y +
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN-----VSVSNALMTLYAET 463
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTN-NLNEGIRLFVKMRREGVIPNEITILSL 201
L R +F VSW ++I + +L E + F+ +R G N IT S+
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI-ENKD 260
+ ++ E GK +H L+N I A I YGKCG+ +F + E +D
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ ++MIS Y + + D+ M G R + ++L A +LE G +H+
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ ++ D + ++LVDMY+KCG +D R F R+ WN MISG A G GE
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 381 ALELFVEMEAQGVIPND-ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
AL+LF M+ G P D +TF+G L ACSH+GLL+EG + F M +GL P++EH+ CM
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC--KLHKNVKLGEWAAGQFLSLESH 497
D+L RAG LD+ + I MPM+PN ++ ++L AC + +LG+ AA LE
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE 823
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
VL+ N+YAA +W D+ R+ M+DA + KE G S + + VH F+ GD+ HP+
Sbjct: 824 NAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPD 883
Query: 558 TRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGA 617
IY+ + E+ K+ + GY P L +++ E KE L+YHSEKLA+A+ L +
Sbjct: 884 ADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSST 943
Query: 618 -PIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
PIRI+KNLRVC D H+A +S+I GR+II+RD NRFHHF++G+CSC D+W
Sbjct: 944 LPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 220/467 (47%), Gaps = 18/467 (3%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+N +DV++CN +I Y E G AR++FD+M ++ VSW+ ++ Y RNG EAL
Sbjct: 29 KNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALV 88
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAEL--VDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
LRDM + ++ A +S++ E+ V + G+ +HG + + + V S LI
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV--SNVLI 146
Query: 137 DMYVKC-KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
MY KC ++ YA F + VSW ++I+ Y + R+F M+ +G P E
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 196 ITILSLVKE-CGTVEA-LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
T SLV C E + + + ++G+ + + + + + K G AR VF
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVF 266
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN---DCGIRPNEITMVSL--LVLCAK 308
+ +E ++ + + ++ + +E +F+ MN D I + S L +
Sbjct: 267 NQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE 326
Query: 309 AGSLEMGKWIHSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
G L+ G+ +H ++ G + + LV+MYAKCG I R+F TD+D + WN
Sbjct: 327 VG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
MI+G G A+E + M ++P T I +L +C+ + G+++ H
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKL 444
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN---NVVLGSL 471
G+ V ++ L + G L+E +K+ MP N ++G+L
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 210/463 (45%), Gaps = 20/463 (4%)
Query: 25 DVFVCNAIIMMYGE-VGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
D V N +I MY + +GS+ +A F + K++VSW+++I Y + G A + M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 84 RVARVKPSEIAMISIIHVFAELV--DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
+ +P+E S++ L D++L + + + ++ + + + + L+ + K
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL--TDLFVGSGLVSAFAK 255
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIPNEITIL- 199
+L+YAR VF+ + V+ ++ G + E +LF+ M V P IL
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 200 ------SLVKECGTVEALEFGKLLHAFTLRNGIT-ISVVLATAFIDMYGKCGDFRSARYV 252
SL +E G L+ G+ +H + G+ V + ++MY KCG AR V
Sbjct: 316 SSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F + +KD + ++MI+ Q C E + + M I P T++S L CA
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
++G+ IH K GI + + +L+ +YA+ G ++ ++F++ + D + WN +I
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 373 AMLGDG-EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
A A+ F+ + G N ITF L A S + GK++ H + +
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIAD 550
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
+ ++ + G +D +K+ M R +NV S+++
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 181/384 (47%), Gaps = 12/384 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGL-LDEALDL 79
G +V V NA++ +Y E G L R++F M + D VSW+++I R+ L EA+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ + A K + I S++ + L +LGK +HG ++N ++ +LI Y
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT--ENALIACY 562
Query: 140 VKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
KC + +F + V+W +MI+GYIH L + + L M + G +
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+++ +V LE G +HA ++R + VV+ +A +DMY KCG A F+++
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMN-DCGIRPNEITMVSLLVLCAKAGSLEMG-K 316
++ ++MIS YA+ +E +F M D P+ +T V +L C+ AG LE G K
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAML 375
S D G+ + + + D+ + G++D + ++L+W ++ C
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRA 802
Query: 376 GD-----GEAALELFVEMEAQGVI 394
G+ A E+ ++E + +
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAV 826
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 18/306 (5%)
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
LS V+ C V + H+ +N + V L I+ Y + GD SAR VFD +
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM--GK 316
++ + + ++S Y++ E M GI N+ VS+L C + GS+ + G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKC-GDIDTTYRLFAAATDRDILMWNVMISGCAML 375
IH + K D + L+ MY KC G + F ++ + WN +IS +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGAL--KACSHSGLLQEGKRLFHKM---VHDFGLV 430
GD +A +F M+ G P + TF G+L ACS L + RL ++ + GL+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTF-GSLVTTACS---LTEPDVRLLEQIMCTIQKSGLL 240
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ 490
+ +V +++G L A+K+ M R N V L L+ K GE A
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQ---KWGEEATKL 296
Query: 491 FLSLES 496
F+ + S
Sbjct: 297 FMDMNS 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R C E+ DV V +A++ MY + G L++A + F+ M +++ SW++MI Y R+G +
Sbjct: 647 RACLES----DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 75 EALDLLRDMRV-ARVKPSEIAMISII 99
EAL L M++ + P + + ++
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVL 728
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/459 (44%), Positives = 303/459 (66%), Gaps = 1/459 (0%)
Query: 211 LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISA 270
+ G+ +H+ +R+G + + + + +Y CGD SA VFD + KDL+ +++I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 271 YAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD 330
+A+ +E ++ +MN GI+P+ T+VSLL CAK G+L +GK +H Y+ K G+ R+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 331 TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
L+D+YA+CG ++ LF D++ + W +I G A+ G G+ A+ELF ME+
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 391 -QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
+G++P +ITF+G L ACSH G+++EG F +M ++ + P++EH+GCMVDLL+RAG +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 450 DEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIY 509
+A + I MPM+PN V+ +LL AC +H + L E+A Q L LE + G VL+SN+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 510 AAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMR 569
A+E +W DV IR+ M G+ K PG S +EV VHEF+MGD+ HP++ IY + EM
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 570 EKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCD 629
+L + GY P IS V ++++ EEKE A+ YHSEK+A+A+ LIS +PI +VKNLRVC
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 630 DYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
D H A L+S++Y REI+VRDR+RFHHFK GSCSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 150/295 (50%), Gaps = 7/295 (2%)
Query: 105 LVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWT 164
+ D++LG+ +H V+R+ S + + SL+ +Y C ++A A VFD +V+W
Sbjct: 1 MADVRLGETIHSVVIRS--GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 58
Query: 165 TMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN 224
++I G+ E + L+ +M +G+ P+ TI+SL+ C + AL GK +H + ++
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 225 GITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIF 284
G+T ++ + +D+Y +CG A+ +FD + +K+ + +++I A E ++F
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 285 VQMNDC-GIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYA 342
M G+ P EIT V +L C+ G ++ G ++ ++ I+ + +VD+ A
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 343 KCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
+ G + Y + ++++W ++ C + GD + L F ++ + PN
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 13/202 (6%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF ++V N+++ +Y G + A ++FDKM +KD V+W+++I + NG +EAL L
Sbjct: 17 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 76
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLSTSLI 136
+M +KP ++S++ A++ L LGK +H Y+++ RN S V L+
Sbjct: 77 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV-----LL 131
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNE 195
D+Y +C + A+++FD + VSWT++I G E I LF M EG++P E
Sbjct: 132 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 191
Query: 196 IT---ILSLVKECGTV-EALEF 213
IT IL CG V E E+
Sbjct: 192 ITFVGILYACSHCGMVKEGFEY 213
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/645 (34%), Positives = 352/645 (54%), Gaps = 3/645 (0%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D + N++I +Y + AR+LFD M +++ VSW M++ Y +G E L L + M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 85 VA-RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
+ +P+E + + ++ GK HG ++ V +L+ MY C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFV--RNTLVYMYSLCS 185
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
A V D + +++ ++GY+ EG+ + K E + N +T LS ++
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
+ L +H+ +R G V A I+MYGKCG A+ VFD +++ +
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+ ++ AY Q +E ++F +M+ + PNE T LL A+ L+ G +H +
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K G + + +LV+MYAK G I+ + F+ T RDI+ WN MISGC+ G G ALE
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALE 425
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
F M G IPN ITFIG L+ACSH G +++G F++++ F + P ++HY C+V LL
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 444 SRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNV 503
S+AG+ +A+ + P+ + V +LL AC + +N +LG+ A + + G V
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYV 545
Query: 504 LMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYE 563
L+SNI+A +W V+ +R M + G+ KEPGVS I + H F+ D +HPE IY
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYA 605
Query: 564 IVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVK 623
V E+ K+ +GY+PD++ ++D E++E L+YHSEKLA+AYGLI +P+ + K
Sbjct: 606 KVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTK 665
Query: 624 NLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
N+R+CDD H+A L+S+I R I++RD NRFHHF +G CSC DYW
Sbjct: 666 NVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 161/332 (48%), Gaps = 21/332 (6%)
Query: 7 ISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRN 66
+ +R RF GF+ +V C A+I MYG+ G + +A+++FD ++ +T++
Sbjct: 257 LQVHSRMVRF----GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 67 YGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ 126
Y ++ +EAL+L M V P+E +++ AEL LK G LHG V+++ +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY--R 370
Query: 127 SGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
+ V + +L++MY K ++ AR F G + IV+W TMI+G H E + F +M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 187 RREGVIPNEITILSLVKECGTVEALE-----FGKLLHAFTLRNGIT--ISVVLATAFIDM 239
G IPN IT + +++ C + +E F +L+ F ++ I +V + M
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 240 YGKCGDF-RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
+ DF R+A +D + + L+ + Y + E + I ND G+
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE-YAIEKYPNDSGV------ 543
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD 330
V L + AK+ E + S ++ +G+K++
Sbjct: 544 YVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 302 LLVLCAKAGSLEMGKWIHSYI---DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
LL +CA + L +G+ IH+++ ++ D SL+++Y KC + +LF
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 359 DRDILMWNVMISGCAMLGDGEAALELFVEMEAQG-VIPNDITFIGALKACSHSGLLQEGK 417
+R+++ W M+ G G L+LF M G PN+ K+CS+SG ++EGK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 418 RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
+ FH +GL+ +V + S EA +++ D+P
Sbjct: 157 Q-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 329/559 (58%), Gaps = 4/559 (0%)
Query: 112 KALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
K +H V+R ++ L T L++ V ++ YAR VFD I W T+ GY+
Sbjct: 28 KKIHAIVLRTGFSEKNS--LLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
E + L+ KMR GV P+E T +VK + G LHA ++ G +
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
+AT + MY K G+ SA ++F+S++ KDL+ +A ++ QT + F +M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
++ + T+VS+L C + GSLE+G+ I+ K+ I + ++ + +DM+ KCG+ +
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 352 RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSG 411
LF R+++ W+ MI G AM GD AL LF M+ +G+ PN +TF+G L ACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 412 LLQEGKRLFHKMVH--DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
L+ EGKR F MV D L P+ EHY CMVDLL R+GLL+EA + I MP+ P+ + G
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
+LL AC +H+++ LG+ A + Y+VL+SNIYAA KW V +R MR G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
K SS+E G +H F GD+ HP+++ IYE + E+ +K+ +GY PD +V +++
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 590 GEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVR 649
EEKE +L++HSEKLA+A+GLI PG PIR++KNLR CDD H + +S + EII+R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 650 DRNRFHHFKEGSCSCHDYW 668
D+NRFHHF+ G CSC ++W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 182/356 (51%), Gaps = 9/356 (2%)
Query: 39 VGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISI 98
+G + +ARQ+FD+M W+T+ + Y RN L E+L L + MR V+P E +
Sbjct: 56 IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFV 115
Query: 99 IHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA 158
+ ++L D G ALH +V++ G G+ ++T L+ MY+K L+ A +F+
Sbjct: 116 VKAISQLGDFSCGFALHAHVVK-YGFGCLGI-VATELVMMYMKFGELSSAEFLFESMQVK 173
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
+V+W +A + T N + F KM + V + T++S++ CG + +LE G+ ++
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+ I ++++ A +DM+ KCG+ +AR +F+ ++ ++++ S MI YA
Sbjct: 234 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI---DKQGIKRDTKLKT 335
E +F M + G+RPN +T + +L C+ AG + GK S + + + ++ +
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 353
Query: 336 SLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD---GEAALELFVE 387
+VD+ + G ++ Y + D +W ++ CA+ D G+ ++ VE
Sbjct: 354 CMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR 87
V ++MMY + G L A LF+ M KD V+W+ + + G AL+ M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 88 VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR-NCGQSGVPLSTSLIDMYVKCKNLA 146
V+ ++S++ +L L++G+ ++ + +C + + + +DM++KC N
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC---NIIVENARLDMHLKCGNTE 262
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
AR +F+ ++VSW+TMI GY + E + LF M+ EG+ PN +T L ++ C
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 207 TVEALEFGK 215
+ GK
Sbjct: 323 HAGLVNEGK 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
++ V NA + M+ + G+ E AR LF++M ++ VSWSTMI Y NG EAL L M+
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 85 VARVKPSEIAMISII 99
++P+ + + ++
Sbjct: 304 NEGLRPNYVTFLGVL 318
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/670 (36%), Positives = 369/670 (55%), Gaps = 21/670 (3%)
Query: 1 MLSHTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSW 60
++S F + + AR + R+V N ++ Y + + AR +F+ M +++ VSW
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 61 STMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD-LKLGKALHGYVM 119
+ M++ Y + G++ EA L M E +S +F L+D ++ KA Y M
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRM-------PERNEVSWTVMFGGLIDDGRIDKARKLYDM 166
Query: 120 RNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
V ST++I + + AR +FD ++V+WTTMI GY N ++
Sbjct: 167 ----MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDM 239
+LF M + + +L +A EF +++ V+ A I
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP--------MKPVIACNAMIVG 274
Query: 240 YGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
+G+ G+ AR VFD +E++D MI AY + E D+F QM G+RP+ ++
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 300 VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD 359
+S+L +CA SL+ G+ +H+++ + D + + L+ MY KCG++ +F +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 360 RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
+DI+MWN +ISG A G GE AL++F EM + G +PN +T I L ACS++G L+EG +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHK 479
F M F + P VEHY C VD+L RAG +D+A +LI M ++P+ V G+LL ACK H
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 480 NVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
+ L E AA + E G VL+S+I A+ +KWGDV+ +R+ MR +SK PG S I
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 540 EVNGSVHEFIMGD-REHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALN 598
EV VH F G + HPE I ++ + L GY+PD S VL ++D EEK +L+
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 599 YHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFK 658
HSE+LA+AYGL+ + G PIR++KNLRVC D H A L+S++ REII+RD NRFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 659 EGSCSCHDYW 668
G CSC DYW
Sbjct: 695 NGECSCRDYW 704
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 208/517 (40%), Gaps = 99/517 (19%)
Query: 29 CNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARV 88
C+ I +G + AR+ FD + K SW++++ Y NGL EA L +M
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----- 74
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYA 148
SE ++S L+ Y+K + + A
Sbjct: 75 --SERNVVSW----------------------------------NGLVSGYIKNRMIVEA 98
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
R+VF+ ++VSWT M+ GY+ + E LF +M + + L+ +
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD---- 154
Query: 209 EALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
G++ A L + + + VV +T I + G AR +FD + ++++ + M
Sbjct: 155 -----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
I+ Y Q N +D +F M + E++ S+L+ +G +E + + + +
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAE---EFFEVMPM 262
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
K +V + + G+I R+F DRD W MI G AL+LF +
Sbjct: 263 KPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLF--------------------------- 420
M+ QGV P+ + I L C+ LQ G+++
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 421 ---HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAA 474
K+V D + + ++ + GL +EA K+ +MP PN V L ++L A
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 475 C----KLHKNVKLGEWAAGQFL---SLESHKCGYNVL 504
C KL + +++ E +F ++E + C ++L
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 326/526 (61%), Gaps = 1/526 (0%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
++ YA S+F G + TMI GY++ + E + + +M + G P+ T L+K
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C ++++ GK +H + G+ V + + I+MYG+CG+ + VF+ +E+K
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 264 CSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
S+M+SA A E +F M ++ ++ E MVS L+ CA G+L +G IH ++
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
+ + + ++TSLVDMY KCG +D +F R+ L ++ MISG A+ G+GE+AL
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+F +M +G+ P+ + ++ L ACSHSGL++EG+R+F +M+ + + P EHYGC+VDL
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 443 LSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN 502
L RAGLL+EA + I +P+ N+V+ + L+ C++ +N++LG+ AA + L L SH G
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDY 440
Query: 503 VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIY 562
+L+SN+Y+ W DV+ R + G+ + PG S +E+ G H F+ DR HP+ + IY
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIY 500
Query: 563 EIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIV 622
+++ +M +L GY+PD++ +L+N+D EEK+ L HS+K+A+A+GL+ PG+ I+I
Sbjct: 501 KMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIA 560
Query: 623 KNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+NLR+C D H T +S IY REI+VRDRNRFH FK G+CSC DYW
Sbjct: 561 RNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 12/375 (3%)
Query: 37 GEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMI 96
G S+ +A +F + D ++TMIR Y +EAL +M +P
Sbjct: 77 GWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYP 136
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGF 155
++ L ++ GK +HG V + G ++ V + SLI+MY +C + + +VF+
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFK---LGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT-ILSLVKECGTVEALEFG 214
+ SW++M++ +E + LF M E + E + ++S + C AL G
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+H F LRN +++++ T+ +DMY KCG A ++F +E ++ + SAMIS A
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG-IKRDTKL 333
+ +F +M G+ P+ + VS+L C+ +G ++ G+ + + + K+G ++ +
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 334 KTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD---GEAALELFVEME 389
LVD+ + G ++ + +++ ++W +S C + + G+ A + +++
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433
Query: 390 AQGVIPNDITFIGAL 404
+ P D I L
Sbjct: 434 SHN--PGDYLLISNL 446
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G DVFV N++I MYG G +E + +F+K+ K A SWS+M+ G+ E L L
Sbjct: 162 GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLF 221
Query: 81 RDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
R M +K E M+S + A L LG ++HG+++RN + + + TSL+DMY
Sbjct: 222 RGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN--ISELNIIVQTSLVDMY 279
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
VKC L A +F + ++++ MI+G +R+F KM +EG+ P+ + +
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
S++ C ++ G+ + A L+ G + + +D+ G+ G A SI
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 368/647 (56%), Gaps = 7/647 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ D+ V NA+I MY + G ++ AR LFD+M +D +SW+ MI Y NG+ E L+L
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR V P + + S+I L D +LG+ +H YV+ + + SL MY+
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA--VDISVCNSLTQMYL 343
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ A +F IVSWTTMI+GY + ++ I + M ++ V P+EIT+ +
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA 403
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C T+ L+ G LH ++ + V++A I+MY KC A +F +I K+
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 261 LMICSAMISAYAQTN-CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
++ +++I+ N C + + IF++ ++PN IT+ + L CA+ G+L GK IH
Sbjct: 464 VISWTSIIAGLRLNNRCFEAL--IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+++ + G+ D L +L+DMY +CG ++T + F + +D+ WN++++G + G G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGS 580
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
+ELF M V P++ITFI L CS S ++++G F KM D+G+ P ++HY C+
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACV 639
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKC 499
VDLL RAG L EA K I MP+ P+ V G+LL AC++H + LGE +A L+
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 500 GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETR 559
GY +L+ N+YA KW +V+ +RR M++ G++ + G S +EV G VH F+ D+ HP+T+
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 560 RIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPI 619
I ++ EK+ VG T + M+ ++ HSE+ A+A+GLI+ PG PI
Sbjct: 760 EINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPI 819
Query: 620 RIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHD 666
+ KNL +C++ H+ +S+ REI VRD FHHFK+G CSC D
Sbjct: 820 WVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 5/410 (1%)
Query: 70 NGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV 129
NG L+EA+ LL M+ RV E ++++ + + G ++ + + + GV
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS--SLGV 129
Query: 130 PLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR- 188
L + + M+V+ NL A VF S ++ SW ++ GY +E + L+ +M
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
GV P+ T +++ CG + L GK +H +R G + + + A I MY KCGD +S
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
AR +FD + +D++ +AMIS Y + E ++F M + P+ +T+ S++ C
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
G +G+ IH+Y+ G D + SL MY G +LF+ +DI+ W M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
ISG + A++ + M+ V P++IT L AC+ G L G L HK+
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-HKLAIKAR 428
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
L+ V ++++ S+ +D+A + ++P R N + S++A +L+
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
+ G L E ++L M+ V +E ++LV+ C A E G +++ L +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
++ V L AF+ M+ + G+ A YVF + ++L + ++ YA+ DE ++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 287 MNDC-GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M G++P+ T +L C L GK +H ++ + G + D + +L+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
D+ + LF RDI+ WN MISG G LELF M V P+ +T +
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
AC G + G+ + H V G + + + AG EA+KL M
Sbjct: 306 ACELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/675 (34%), Positives = 370/675 (54%), Gaps = 30/675 (4%)
Query: 1 MLSHTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSW 60
M++ F + R AR + R++ N ++ Y + G ++ AR++FD M +++ VSW
Sbjct: 54 MVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSW 113
Query: 61 STMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR 120
+ +++ Y NG +D A L M P + + + + L D ++ A Y M
Sbjct: 114 TALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGFLQDGRIDDACKLYEM- 166
Query: 121 NRNCGQSGVP-----LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN 175
+P TS+I K + AR +FD S S+++WTTM+ GY N
Sbjct: 167 --------IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
+++ ++F M + + ++ V+ G +E E +L ++ V+ A
Sbjct: 219 VDDARKIFDVMPEKTEVSWTSMLMGYVQN-GRIEDAE--ELFEVMPVK-----PVIACNA 270
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
I G+ G+ AR VFDS++ ++ +I + + E D+F+ M G+RP
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
T++S+L +CA SL GK +H+ + + D + + L+ MY KCG++ + +F
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQ 414
+DI+MWN +ISG A G GE AL++F EM G PN++TF+ L ACS++G+++
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
EG +++ M FG+ P HY CMVD+L RAG +EA ++I M + P+ V GSLL A
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 475 CKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEP 534
C+ H + + E+ A + + +E G +L+SN+YA++ +W DV+++R+ M+ + K P
Sbjct: 511 CRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSP 570
Query: 535 GVSSIEVNGSVHEFIMGD-REHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEK 593
G S EV VH F G HPE I +I+ E+ L GY PD S L ++D EEK
Sbjct: 571 GCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEK 630
Query: 594 ETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNR 653
+L YHSE+LA+AY L+ ++ G PIR++KNLRVC D H A ++S++ REII+RD NR
Sbjct: 631 VNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANR 690
Query: 654 FHHFKEGSCSCHDYW 668
FHHF+ G CSC DYW
Sbjct: 691 FHHFRNGECSCKDYW 705
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/551 (37%), Positives = 329/551 (59%), Gaps = 3/551 (0%)
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
G+ +H +++++ + + + +L++MY KC +L AR VF+ V+WTT+I+GY
Sbjct: 79 GRIVHAHILQS--IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
+ + + F +M R G PNE T+ S++K G LH F ++ G +V
Sbjct: 137 SQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+ +A +D+Y + G A+ VFD++E+++ + +A+I+ +A+ + ++ ++F M
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
G RP+ + SL C+ G LE GKW+H+Y+ K G K +L+DMYAK G I
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
++F RD++ WN +++ A G G+ A+ F EM G+ PN+I+F+ L ACSHS
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
GLL EG + M D G+VP+ HY +VDLL RAG L+ A + I +MP+ P + +
Sbjct: 377 GLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 435
Query: 471 LLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
LL AC++HKN +LG +AA L+ G +V++ NIYA+ +W D + +R+ M+++G+
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 495
Query: 531 SKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDG 590
KEP S +E+ ++H F+ D HP+ I E+ K+ +GY PD S V++++D
Sbjct: 496 KKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQ 555
Query: 591 EEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRD 650
+E+E L YHSEK+A+A+ L++ PG+ I I KN+RVC D H A L S++ GREIIVRD
Sbjct: 556 QEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615
Query: 651 RNRFHHFKEGS 661
NRFHHFK+ S
Sbjct: 616 TNRFHHFKDAS 626
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 8/384 (2%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F D+ + N ++ MY + GSLE AR++F+KM +D V+W+T+I Y ++ +AL
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYV 140
M P+E + S+I A G LHG+ ++ CG S V + ++L+D+Y
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK---CGFDSNVHVGSALLDLYT 207
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ + A+ VFD + VSW +IAG+ + + + LF M R+G P+ + S
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
L C + LE GK +HA+ +++G + +DMY K G AR +FD + +D
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
++ +++++AYAQ E F +M GIRPNEI+ +S+L C+ +G L+ G +
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD-- 377
+ K GI + ++VD+ + GD++ R + +W +++ C M +
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 378 -GEAALELFVEMEAQGVIPNDITF 400
G A E E++ P+ I +
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILY 471
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+L+K+C + L G+++HA L++ +V+ ++MY KCG AR VF+ + +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D + + +IS Y+Q + + F QM G PNE T+ S++ A G +H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+ K G + + ++L+D+Y + G +D +F A R+ + WN +I+G A E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
ALELF M G P+ ++ ACS +G L++GK + M+ G +
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTL 303
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEW 486
+D+ +++G + +A+K I D + + V SLL A H K W
Sbjct: 304 LDMYAKSGSIHDARK-IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 132/257 (51%), Gaps = 5/257 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
FC + GF +V V +A++ +Y G ++ A+ +FD + ++ VSW+ +I + R ++
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS-TS 134
AL+L + M +PS + S+ + L+ GK +H Y++++ G+ V + +
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS---GEKLVAFAGNT 302
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+DMY K ++ AR +FD + +VSW +++ Y E + F +MRR G+ PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF-RSARYVF 253
EI+ LS++ C L+ G + ++GI +D+ G+ GD R+ R++
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 254 DSIENKDLMICSAMISA 270
+ I A+++A
Sbjct: 423 EMPIEPTAAIWKALLNA 439
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 319/547 (58%), Gaps = 41/547 (7%)
Query: 163 WTTMIAGYIH---TNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
W +I +H + + I ++++MR V P+ T L+ L G+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID- 278
L G+ + T+ ++MY CGD RSA+ VFD +KDL +++++AYA+ ID
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 279 ------------------------------EVFDIFVQM-----NDCGIRPNEITMVSLL 303
E D+F +M N+ +RPNE TM ++L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 304 VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDI 362
C + G+LE GKW+H+YIDK ++ D L T+L+DMYAKCG ++ R+F A + +D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKRLFH 421
++ MI AM G + +LF EM I PN +TF+G L AC H GL+ EGK F
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNV 481
M+ +FG+ P ++HYGCMVDL R+GL+ EA+ I MPM P+ ++ GSLL+ ++ ++
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 482 KLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
K E A + + L+ G VL+SN+YA +W +V IR M GI+K PG S +EV
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 542 NGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHS 601
G VHEF++GD E+ RIY ++ E+ ++L GY D VL++++ ++KE AL+YHS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 602 EKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGS 661
EKLA+A+ L+ PG P+RI+KNLR+C D H ++S+++ REI+VRD NRFHHF++GS
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 662 CSCHDYW 668
CSC D+W
Sbjct: 567 CSCRDFW 573
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 156/313 (49%), Gaps = 16/313 (5%)
Query: 123 NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
+ G +P S+++ Y K + AR +FD +++SW+ +I GY+ E + L
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 183 FVKMRREG-----VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFI 237
F +M+ V PNE T+ +++ CG + ALE GK +HA+ + + I +VL TA I
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 238 DMYGKCGDFRSARYVFDSI-ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC-GIRPN 295
DMY KCG A+ VF+++ KD+ SAMI A DE F +F +M I PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 296 EITMVSLLVLCAKAGSLEMGK-WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+T V +L C G + GK + I++ GI + +VD+Y + G I
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 355 AA-ATDRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
A+ + D+L+W ++SG MLGD E AL+ +E++ N ++ + +
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM----NSGAYVLLSNVYAKT 417
Query: 411 GLLQEGKRLFHKM 423
G E K + H+M
Sbjct: 418 GRWMEVKCIRHEM 430
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 12 RGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNG 71
R A+ ++ +D+ N+++ Y + G ++ AR+LFD+M +++ +SWS +I Y G
Sbjct: 114 RSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCG 173
Query: 72 LLDEALDLLRDMRVAR-----VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ 126
EALDL R+M++ + V+P+E M +++ L L+ GK +H Y+ ++ +
Sbjct: 174 KYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI--DKYHVE 231
Query: 127 SGVPLSTSLIDMYVKCKNLAYARSVFDGF-SGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
+ L T+LIDMY KC +L A+ VF+ S + +++ MI +E +LF +
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE 291
Query: 186 M-RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKC 243
M + + PN +T + ++ C + GK + GIT S+ +D+YG+
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 244 GDFRSARYVFDSIE-NKDLMICSAMISA 270
G + A S+ D++I +++S
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 326/559 (58%), Gaps = 4/559 (0%)
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
KA HG ++R G V L LI+ Y KC + AR VFDG S+VSW TMI Y
Sbjct: 80 AKACHGKIIRIDLEGD--VTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLY 137
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG-TVEALEFGKLLHAFTLRNGITIS 229
+E + +F++MR EG +E TI S++ CG +ALE KL H +++ I ++
Sbjct: 138 TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLN 196
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
+ + TA +D+Y KCG + A VF+S+++K + S+M++ Y Q +E ++ +
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
+ N+ T+ S++ C+ +L GK +H+ I K G + + +S VDMYAKCG +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+Y +F+ ++++ +WN +ISG A + + LF +M+ G+ PN++TF L C H
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
+GL++EG+R F M +GL P V HY CMVD+L RAGLL EA +LI +P P + G
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 436
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
SLLA+C+++KN++L E AA + LE G +VL+SNIYAA +W +++ R+ +RD
Sbjct: 437 SLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCD 496
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
+ K G S I++ VH F +G+ HP R I + + K GY P + L +++
Sbjct: 497 VKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVE 556
Query: 590 GEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVR 649
+KE L HSEKLA+ +GL+ + +P+RI+KNLR+C D H S R IIVR
Sbjct: 557 IGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVR 616
Query: 650 DRNRFHHFKEGSCSCHDYW 668
D NRFHHF +G CSC D+W
Sbjct: 617 DVNRFHHFSDGHCSCGDFW 635
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 194/373 (52%), Gaps = 7/373 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DV + N +I Y + G +E ARQ+FD M+++ VSW+TMI Y RN + EALD+ +MR
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
K SE + S++ D K LH + + C + + T+L+D+Y KC
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLH--CLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ A VF+ S V+W++M+AGY+ N E + L+ + +R + N+ T+ S++
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C + AL GK +HA ++G +V +A++ +DMY KCG R + +F ++ K+L +
Sbjct: 273 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 332
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ +IS +A+ EV +F +M G+ PNE+T SLL +C G +E G+ +
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 392
Query: 325 Q-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD---GE 379
G+ + + +VD+ + G + Y L + D +W +++ C + + E
Sbjct: 393 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAE 452
Query: 380 AALELFVEMEAQG 392
A E E+E +
Sbjct: 453 VAAEKLFELEPEN 465
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 172 HTNNLNEGIRLFVKMRREGVIP----NEITILSLVKE----CGTVEALEFGKLLHAFTLR 223
+T++L+ I + +E V P NE + +LV E C A+ K H +R
Sbjct: 30 NTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIR 89
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
+ V L I+ Y KCG AR VFD + + L+ + MI Y + E DI
Sbjct: 90 IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDI 149
Query: 284 FVQMNDCGIRPNEITMVSLLVLCA-KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
F++M + G + +E T+ S+L C +LE K +H K I + + T+L+D+YA
Sbjct: 150 FLEMRNEGFKFSEFTISSVLSACGVNCDALECKK-LHCLSVKTCIDLNLYVGTALLDLYA 208
Query: 343 KCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIG 402
KCG I ++F + D+ + W+ M++G + E AL L+ + + N T
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
+ ACS+ L EGK++ H ++ G V VD+ ++ G L E+
Sbjct: 269 VICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%)
Query: 18 CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
C++GF +VFV ++ + MY + GSL + +F ++ +K+ W+T+I + ++ E +
Sbjct: 290 CKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVM 349
Query: 78 DLLRDMRVARVKPSEIAMISIIHV 101
L M+ + P+E+ S++ V
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSV 373
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 350/647 (54%), Gaps = 16/647 (2%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
V + N ++ MY E SLE A +LFD+M + +AVS +TMI Y G+LD+A+ L M
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+ KP +++ L G+ +H +V+R C S + T +++MYVKC L
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLC--SNTSIETGIVNMYVKCGWL 235
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
A+ VFD + V+ T ++ GY + ++LFV + EGV + ++K C
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
++E L GK +HA + G+ V + T +D Y KC F SA F I + + S
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRP-NEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
A+IS Y Q + +E F + N T S+ C+ +G +H+ K
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
+ + +++L+ MY+KCG +D +F + + DI+ W ISG A G+ AL L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F +M + G+ PN +TFI L ACSH+GL+++GK M+ + + P ++HY CM+D+ +
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
R+GLLDEA K + +MP P+ + L+ C HKN++LGE A + L+ VL
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVL 595
Query: 505 MSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEI 564
N+Y KW + +++ + M + + KE S I+ G +H FI+GD+ HP+T+ IYE
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655
Query: 565 VAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISV---APGAPIRI 621
+ E ++ + +++ E +E L+ HSE+LA+A+GLISV AP API++
Sbjct: 656 LKEFDGFMEGDMFQCNMT--------ERREQLLD-HSERLAIAFGLISVHGNAP-APIKV 705
Query: 622 VKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
KNLR C D H +S + G EI++RD RFHHFKEG CSC+DYW
Sbjct: 706 FKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 9/324 (2%)
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI-TISVVLA 233
LNE +M + GV + + L + C + +L G+LLH +R GI SV+L
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQ 121
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
+ MY +C A +FD + + + + MISAYA+ +D+ +F M G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
P +LL +L+ G+ IH+++ + G+ +T ++T +V+MY KCG + R+
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F + + ++ G G AL+LFV++ +GV + F LKAC+ L
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
GK++ H V GL +V +VD + + A + ++ PN+V ++++
Sbjct: 302 NLGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIIS 359
Query: 474 A-CKLHKNVKLGEWAAGQFLSLES 496
C++ + E A F SL S
Sbjct: 360 GYCQMSQ----FEEAVKTFKSLRS 379
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +V V ++ Y + S E A + F ++ + + VSWS +I Y + +EA+
Sbjct: 315 GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 81 RDMRVARVK-PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDM 138
+ +R + SI + L D +G +H ++ G Q G ++LI M
Sbjct: 375 KSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG---ESALITM 431
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC L A VF+ IV+WT I+G+ + N +E +RLF KM G+ PN +T
Sbjct: 432 YSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 491
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY-VFDSIE 257
++++ C +E GK C D +Y V +I+
Sbjct: 492 IAVLTACSHAGLVEQGK--------------------------HCLDTMLRKYNVAPTID 525
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGK 316
+ D MI YA++ +DE M + P+ ++ L C +LE+G+
Sbjct: 526 HYD-----CMIDIYARSGLLDEALKF---MKNMPFEPDAMSWKCFLSGCWTHKNLELGE 576
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 320/538 (59%), Gaps = 5/538 (0%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
L LI+MYVK L A +FD +++SWTTMI+ Y + + L V M R+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V PN T S+++ C + + ++LH ++ G+ V + +A ID++ K G+ A
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VFD + D ++ +++I +AQ + D ++F +M G + T+ S+L C
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
LE+G H +I K +D L +LVDMY KCG ++ R+F +RD++ W+ MIS
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
G A G + AL+LF M++ G PN IT +G L ACSH+GLL++G F M +G+
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ 490
P EHYGCM+DLL +AG LD+A KL+ +M P+ V +LL AC++ +N+ L E+AA +
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 491 FLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIM 550
++L+ G L+SNIYA KW V +IR MRD GI KEPG S IEVN +H FI+
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 551 GDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGL 610
GD HP+ + + + ++ +L +GY P+ + VL +++GE+ E +L +HSEKLA+A+GL
Sbjct: 513 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 572
Query: 611 ISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+++ IRI KNLR+C D H L S++ R I++RD R+HHF++G CSC DYW
Sbjct: 573 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 9/355 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NG +F+ N +I MY + L A QLFD+M ++ +SW+TMI Y + + +AL+L
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
L M V+P+ S++ + D+++ LH +++ +S V + ++LID++
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG--LESDVFVRSALIDVF 204
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
K A SVFD + W ++I G+ + + + LF +M+R G I + T+
Sbjct: 205 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
S+++ C + LE G H ++ ++L A +DMY KCG A VF+ ++ +
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ S MIS AQ E +F +M G +PN IT+V +L C+ AG LE G +
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 320 SYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGC 372
+ K GI + ++D+ K G +D +L + D + W ++ C
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 5/240 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G DVFV +A+I ++ ++G E A +FD+MV DA+ W+++I + +N D AL+
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L + M+ A + + S++ L L+LG H ++++ + L+ +L+DM
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY----DQDLILNNALVDM 302
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC +L A VF+ +++W+TMI+G E ++LF +M+ G PN ITI
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 199 LSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ ++ C LE G + GI ID+ GK G A + + +E
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 8/292 (2%)
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
+ +L ++ ++ G+ + T L+K C + A+ G L+ NG +
Sbjct: 38 YQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
L I+MY K A +FD + ++++ + MISAY++ + ++ V M
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
+RPN T S+L C + M +H I K+G++ D ++++L+D++AK G+ +
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 352 RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSG 411
+F D ++WN +I G A + ALELF M+ G I T L+AC+
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 412 LLQEGKRL-FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
LL+ G + H + +D L+ +VD+ + G L++A ++ M R
Sbjct: 275 LLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKER 322
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/566 (37%), Positives = 327/566 (57%), Gaps = 10/566 (1%)
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMI 167
L+ G+ +H ++++ R L T L+ Y KC L AR V D ++VSWT MI
Sbjct: 68 LRDGQRVHAHMIKTRYL--PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 168 AGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGIT 227
+ Y T + +E + +F +M R PNE T +++ C L GK +H ++
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM 287
+ + ++ +DMY K G + AR +F+ + +D++ C+A+I+ YAQ +E ++F ++
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
+ G+ PN +T SLL + L+ GK H ++ ++ + L+ SL+DMY+KCG++
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 348 DTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKA 406
RLF +R + WN M+ G + G G LELF M + + V P+ +T + L
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 407 CSHSGLLQEGKRLFHKMVH-DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN 465
CSH + G +F MV ++G P EHYGC+VD+L RAG +DEA + I MP +P
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAM 525
VLGSLL AC++H +V +GE + + +E G V++SN+YA+ +W DV+++R M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 526 RDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMRE---KLDNVGYTPDIS 582
++KEPG S I+ ++H F DR HP R E++A+M+E K+ GY PD+S
Sbjct: 486 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHP---RREEVLAKMKEISIKMKQAGYVPDLS 542
Query: 583 AVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIY 642
VL ++D E+KE L HSEKLA+ +GLI+ G PIR+ KNLR+C D HN + S+++
Sbjct: 543 CVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVF 602
Query: 643 GREIIVRDRNRFHHFKEGSCSCHDYW 668
RE+ +RD+NRFH +G CSC DYW
Sbjct: 603 EREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
++ +++ YG+ LE AR++ D+M +K+ VSW+ MI Y + G EAL + +M
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+ KP+E +++ L LGK +HG +++ S + + +SL+DMY K +
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY--DSHIFVGSSLLDMYAKAGQI 204
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
AR +F+ +VS T +IAGY E + +F ++ EG+ PN +T SL+
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
+ L+ GK H LR + VL + IDMY KCG+ AR +FD++ + + +
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMGKWIHSYI-- 322
AM+ Y++ EV ++F M D ++P+ +T++++L C+ + G I +
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+ G K T+ +VDM + G ID +
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 3/264 (1%)
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+L+ C AL G+ +HA ++ + L T + YGKC AR V D + K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+++ +AMIS Y+QT E +F +M +PNE T ++L C +A L +GK IH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
I K + +SL+DMYAK G I +F +RD++ +I+G A LG E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF-HKMVHDFGLVPKVEHYGC 438
ALE+F + ++G+ PN +T+ L A S LL GK+ H + + +++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--S 294
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMR 462
++D+ S+ G L A++L +MP R
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPER 318
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/649 (33%), Positives = 355/649 (54%), Gaps = 3/649 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ + FV A+I Y GS++ AR +F+ ++ KD V W+ ++ Y NG +++L LL
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR+A P+ + + L K +HG +++ C + L+ +Y
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT--CYVLDPRVGVGLLQLYT 293
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ +++ A VF+ +V W+ MIA + NE + LF++MR V+PNE T+ S
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C + G+ LH ++ G + + ++ A ID+Y KC +A +F + +K+
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + +I Y + F +F + + E+T S L CA S+++G +H
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
K + + SL+DMYAKCGDI +F D+ WN +ISG + G G
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
AL + M+ + PN +TF+G L CS++GL+ +G+ F M+ D G+ P +EHY CMV
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
LL R+G LD+A KLI +P P+ ++ ++L+A N + +A + L +
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEA 653
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
VL+SN+YA +W +V+ IR++M++ G+ KEPG+S IE G VH F +G +HP+ +
Sbjct: 654 TYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKL 713
Query: 561 IYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAP-I 619
I ++ + K GY PD +AVL+++D EEK+ L HSE+LA+AYGL+ + I
Sbjct: 714 INGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRI 773
Query: 620 RIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
I+KNLR+C D H+A ++S I R++++RD NRFHHF G CSC D+W
Sbjct: 774 LIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 208/435 (47%), Gaps = 7/435 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D+F N ++ Y + G + A LFD+M +++ VS+ T+ + Y + + L +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+ + S + +F L ++ LH +++ S + +LI+ Y C +
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGY--DSNAFVGAALINAYSVCGS 196
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ AR+VF+G IV W +++ Y+ + ++L MR G +PN T + +K
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
+ A +F K +H L+ + + + +Y + GD A VF+ + D++
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
S MI+ + Q +E D+F++M + + PNE T+ S+L CA +G+ +H + K
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G D + +L+D+YAKC +DT +LFA + ++ + WN +I G LG+G A +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F E V ++TF AL AC+ + G ++ H + KV ++D+ +
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 445 RAGLLDEAQKLIIDM 459
+ G + AQ + +M
Sbjct: 496 KCGDIKFAQSVFNEM 510
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 165/363 (45%), Gaps = 11/363 (3%)
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
KA+H +++ +C + + L++ YVK A ++FD + VS+ T+ GY
Sbjct: 68 AKAIHCDILKKGSCLD--LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
+ I L+ ++ REG N S +K +++ E LH+ ++ G +
Sbjct: 126 A----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+ A I+ Y CG SAR VF+ I KD+++ + ++S Y + ++ + M
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
G PN T + L G+ + K +H I K D ++ L+ +Y + GD+
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
+++F D++ W+ MI+ G A++LF+ M V+PN+ T L C+
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP----NNV 466
G++L H +V G + ++D+ ++ +D A KL ++ + N V
Sbjct: 362 KCSGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 467 VLG 469
++G
Sbjct: 421 IVG 423
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 339/618 (54%), Gaps = 14/618 (2%)
Query: 58 VSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGY 117
+S + +I++ + G L +A+ +L PS+ +I L +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 118 VMRNRNCGQSGVP-LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
++ N G P L+T LI MY ++ YAR VFD +I W + +
Sbjct: 103 ILDN---GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 177 NEGIRLFVKMRREGVIPNEITILSLVKEC----GTVEALEFGKLLHAFTLRNGITISVVL 232
E + L+ KM R GV + T ++K C TV L GK +HA R G + V +
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM--NDC 290
T +DMY + G A YVF + ++++ SAMI+ YA+ E F +M
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
PN +TMVS+L CA +LE GK IH YI ++G+ + ++LV MY +CG ++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
R+F DRD++ WN +IS + G G+ A+++F EM A G P +TF+ L ACSH
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
GL++EGKRLF M D G+ P++EHY CMVDLL RA LDEA K++ DM P V GS
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 471 LLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
LL +C++H NV+L E A+ + +LE G VL+++IYA W +V +++ + G+
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 531 SKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDG 590
K PG +EV ++ F+ D +P +I+ + ++ E + GY P VL ++
Sbjct: 520 QKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELET 579
Query: 591 EEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRD 650
EEKE + HSEKLA+A+GLI+ + G PIRI KNLR+C+D H T +S+ +EI+VRD
Sbjct: 580 EEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRD 639
Query: 651 RNRFHHFKEGSCSCHDYW 668
NRFH FK G CSC DYW
Sbjct: 640 VNRFHRFKNGVCSCGDYW 657
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ V++ ++ MY G +++A +F M ++ VSWS MI Y +NG EAL
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 81 RDM--RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
R+M P+ + M+S++ A L L+ GK +HGY++R S +P+ ++L+ M
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL--DSILPVISALVTM 329
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y +C L + VFD +VSW ++I+ Y + I++F +M G P +T
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSA 249
+S++ C +E GK L R+ GI + +D+ G+ A
Sbjct: 390 VSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 344/625 (55%), Gaps = 47/625 (7%)
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV-- 140
+ R K ++A++ F++L K +HG+++R S V +++ L+ + V
Sbjct: 6 LNTLRFKHPKLALLQSCSSFSDL------KIIHGFLLRTHLI--SDVFVASRLLALCVDD 57
Query: 141 ----KCKNL-AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K NL YA +F ++ + +I + ++ + +M + + P+
Sbjct: 58 STFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYG-------------- 241
IT L+K +E + G+ H+ +R G V + + + MY
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 242 -----------------KCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIF 284
KCG +AR +FD + +++L S MI+ YA+ NC ++ D+F
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 285 VQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC 344
M G+ NE MVS++ CA G+LE G+ + Y+ K + + L T+LVDM+ +C
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 345 GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
GDI+ +F + D L W+ +I G A+ G A+ F +M + G IP D+TF L
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
ACSH GL+++G ++ M D G+ P++EHYGC+VD+L RAG L EA+ I+ M ++PN
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
Query: 465 NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRA 524
+LG+LL ACK++KN ++ E + ++ GY VL+SNIYA +W + +R
Sbjct: 418 APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDM 477
Query: 525 MRDAGISKEPGVSSIEVNGSVHEFIMG-DREHPETRRIYEIVAEMREKLDNVGYTPDISA 583
M++ + K PG S IE++G +++F MG D++HPE +I E+ K+ +GY +
Sbjct: 478 MKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Query: 584 VLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYG 643
++D EEKE++++ HSEKLA+AYG++ PG IRIVKNLRVC+D H T L+S +YG
Sbjct: 538 AFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYG 597
Query: 644 REIIVRDRNRFHHFKEGSCSCHDYW 668
RE+IVRDRNRFHHF+ G CSC DYW
Sbjct: 598 RELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 6 FISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIR 65
FI+A R + GF RDV +++ Y + G +E AR++FD+M ++ +WS MI
Sbjct: 167 FIAA---AGRIFGQMGF-RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMIN 222
Query: 66 NYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG 125
Y +N ++A+DL M+ V +E M+S+I A L L+ G+ + YV+++
Sbjct: 223 GYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM-- 280
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
+ L T+L+DM+ +C ++ A VF+G +SW+++I G + ++ + F +
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQ 340
Query: 186 MRREGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCG 244
M G IP ++T +++ C +E G ++ +GI + +DM G+ G
Sbjct: 341 MISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAG 400
Query: 245 DFRSAR-YVFDSIENKDLMICSAMISA---YAQTNCIDEVFDIFVQM 287
A ++ + I A++ A Y T + V ++ +++
Sbjct: 401 KLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 353/653 (54%), Gaps = 11/653 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF V VCN ++ MY G A +F +M KD +SW++++ ++ +G +AL LL
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV----PLSTSLI 136
M + + + S + + G+ LHG V+ SG+ + +L+
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV------VSGLFYNQIIGNALV 404
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
MY K ++ +R V +V+W +I GY + ++ + F MR EGV N I
Sbjct: 405 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464
Query: 197 TILSLVKECGTV-EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T++S++ C + LE GK LHA+ + G + + I MY KCGD S++ +F+
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
++N++++ +AM++A A +EV + +M G+ ++ + L AK LE G
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 584
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H K G + D+ + + DMY+KCG+I ++ + +R + WN++IS
Sbjct: 585 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 644
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
G E F EM G+ P +TF+ L ACSH GL+ +G + + DFGL P +EH
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 704
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
C++DLL R+G L EA+ I MPM+PN++V SLLA+CK+H N+ G AA LE
Sbjct: 705 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 764
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
VL SN++A +W DV ++R+ M I K+ S +++ V F +GDR H
Sbjct: 765 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 824
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAP 615
P+T IY + ++++ + GY D S L + D E+KE L HSE+LA+AY L+S
Sbjct: 825 PQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPE 884
Query: 616 GAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
G+ +RI KNLR+C D H+ +SR+ GR I++RD+ RFHHF+ G CSC DYW
Sbjct: 885 GSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 218/463 (47%), Gaps = 3/463 (0%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++G DV+V AI+ +YG G + +R++F++M D++ VSW++++ Y G +E
Sbjct: 84 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+D+ + MR V +E +M +I L D LG+ + G V+++ +S + + SL
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL--ESKLAVENSL 201
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I M N+ YA +FD S +SW ++ A Y ++ E R+F MRR N
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 261
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T+ +L+ G V+ ++G+ +H ++ G V + + MY G A VF
Sbjct: 262 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 321
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ KDL+ +++++++ + + M G N +T S L C E G
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H + G+ + + +LV MY K G++ + R+ RD++ WN +I G A
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
D + AL F M +GV N IT + L AC G L E + H + G
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++ + ++ G L +Q L + R N + ++LAA H
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHH 543
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 209/429 (48%), Gaps = 4/429 (0%)
Query: 35 MYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIA 94
MY + G ++ AR LFD M ++ VSW+TM+ R GL E ++ R M +KPS
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 95 MISIIHVFAELVDL-KLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFD 153
+ S++ + + G +HG+V ++ S V +ST+++ +Y ++ +R VF+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLL--SDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 154 GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEF 213
++VSWT+++ GY E I ++ MR EGV NE ++ ++ CG ++
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQ 273
G+ + +++G+ + + + I M G G+ A Y+FD + +D + +++ +AYAQ
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
I+E F IF M N T+ +LL + + G+ IH + K G +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 334 KTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGV 393
+L+ MYA G +F +D++ WN +++ G AL L M + G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 394 IPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
N +TF AL AC ++G R+ H +V GL +V + + G + E++
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 454 KLIIDMPMR 462
++++ MP R
Sbjct: 418 RVLLQMPRR 426
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/683 (33%), Positives = 356/683 (52%), Gaps = 68/683 (9%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK------------------------- 55
G +V +CN++I+MY G LE +R++F+ M D+
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 56 ----------DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAEL 105
D V+W++++ Y GL +A+ +L+ M++A +KPS ++ S++ AE
Sbjct: 179 DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 106 VDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTT 165
LKLGKA+HGY++RN+ V + T+LIDMY+K L YAR VFD +IV+W +
Sbjct: 239 GHLKLGKAIHGYILRNQL--WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
+++G + L + L ++M +EG+ P+ IT SL T+ E + G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 226 ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
+ +VV TA K G+FR+A +F+
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNA-------------------------------LKVFI 385
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
+M + G+ PN TM +LL + L GK +H + ++ + D + T+LVDMY K G
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
D+ + +F ++ + WN M+ G AM G GE + F M G+ P+ ITF L
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN 465
C +SGL+QEG + F M +G++P +EH CMVDLL R+G LDEA I M ++P+
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAM 525
+ G+ L++CK+H++++L E A + LE H ++M N+Y+ N+W DV IR M
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 526 RDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVL 585
R+ + + S I+++ +VH F + HP+ IY + ++ ++ GY PD S +
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIH 685
Query: 586 MNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGRE 645
+I EKE L H+EKLAM YGLI APIR+VKN +C D H +S + RE
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745
Query: 646 IIVRDRNRFHHFKEGSCSCHDYW 668
I++++ R HHF++G CSC+D W
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDSW 768
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 110 LGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAG 169
LG +HG +++ R S + ++ + Y +C +L +A +FD ++W ++
Sbjct: 5 LGLTIHGGLIK-RGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 170 YIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS 229
+ + N + + LF +M+ G + T++ L++ C E G+ +H + LR G+ +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
V + + I MY + G +R VF+S+++++L ++++S+Y + +D+ + +M
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 290 CGIRPNEIT-----------------------------------MVSLLVLCAKAGSLEM 314
CG++P+ +T + SLL A+ G L++
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA- 373
GK IH YI + + D ++T+L+DMY K G + +F ++I+ WN ++SG +
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 374 --MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
+L D EA L + ME +G+ P+ IT+ + G ++ + KM + G+ P
Sbjct: 304 ACLLKDAEA---LMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAP 359
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLL 472
V + + S+ G A K+ I M + PN + +LL
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/569 (37%), Positives = 331/569 (58%), Gaps = 7/569 (1%)
Query: 101 VFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI 160
++++L D A++G MR +N S + LI+ YV+ +L AR VFD +
Sbjct: 3 MYSKLGDFPSAVAVYGR-MRKKNYMSSNI-----LINGYVRAGDLVNARKVFDEMPDRKL 56
Query: 161 VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAF 220
+W MIAG I EG+ LF +M G P+E T+ S+ + ++ G+ +H +
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 221 TLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEV 280
T++ G+ + +V+ ++ MY + G + V S+ ++L+ + +I AQ C + V
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 281 FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDM 340
++ M G RPN+IT V++L C+ G+ IH+ K G + +SL+ M
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 341 YAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP-NDIT 399
Y+KCG + + F+ D D +MW+ MIS G G+ A+ELF M Q + N++
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
F+ L ACSHSGL +G LF MV +G P ++HY C+VDLL RAG LD+A+ +I M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVS 519
P++ + V+ +LL+AC +HKN ++ + + L ++ + VL++N++A+ +W DVS
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVS 416
Query: 520 DIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTP 579
++R++MRD + KE G+S E G VH+F MGDR +++ IY + E+ ++ GY P
Sbjct: 417 EVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKP 476
Query: 580 DISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLS 639
D ++VL ++D EEKE+ L HSEKLA+A+ L+ + GAPIRI+KNLRVC D H A +S
Sbjct: 477 DTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYIS 536
Query: 640 RIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
I REI +RD +RFHHF G CSC DYW
Sbjct: 537 VIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 181/381 (47%), Gaps = 15/381 (3%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
++ N +I Y G L AR++FD+M D+ +W+ MI + +E L L R+M
Sbjct: 23 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 82
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL----STSLIDMY 139
P E + S+ A L + +G+ +HGY ++ G+ L ++SL MY
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK------YGLELDLVVNSSLAHMY 136
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
++ L V ++V+W T+I G + L+ M+ G PN+IT +
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 196
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+++ C + G+ +HA ++ G + V + ++ I MY KCG A F E++
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMND-CGIRPNEITMVSLLVLCAKAGSLEMG-KW 317
D ++ S+MISAY DE ++F M + + NE+ ++LL C+ +G + G +
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGCAMLG 376
++K G K K T +VD+ + G +D + + DI++W ++S C +
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 377 DGEAALELFVEMEAQGVIPND 397
+ E A +F E+ + PND
Sbjct: 377 NAEMAQRVFKEILQ--IDPND 395
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 13/294 (4%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ + G D+ V +++ MY G L+ + M ++ V+W+T+I +NG +
Sbjct: 116 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
L L + M+++ +P++I ++++ ++L G+ +H ++ S V + +SL
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA--SSVVAVVSSL 233
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP-N 194
I MY KC L A F V W++MI+ Y +E I LF M + + N
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293
Query: 195 EITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
E+ L+L+ C + G +L + G + T +D+ G+ G A +
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353
Query: 254 DSIENK-DLMICSAMISA---YAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL 303
S+ K D++I ++SA + VF +Q I PN+ LL
Sbjct: 354 RSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ-----IDPNDSACYVLL 402
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 344/645 (53%), Gaps = 6/645 (0%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA 86
F+ N +I MY ++ E AR + ++ VSW+++I +NG AL +MR
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQS-GVPLSTSLIDMYVKCKNL 145
V P++ A L GK +H ++ CG+ V + S DMY K +
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK---CGRILDVFVGCSAFDMYCKTRLR 159
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
AR +FD ++ +W I+ + E I F++ RR PN IT + + C
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
L G LH LR+G V + ID YGKC RS+ +F + K+ +
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
++++AY Q + ++ ++++ + ++ + S+L CA LE+G+ IH++ K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
++R + ++LVDMY KCG I+ + + F +++++ N +I G A G + AL LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 386 VEMEAQGV--IPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
EM +G PN +TF+ L ACS +G ++ G ++F M +G+ P EHY C+VD+L
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 444 SRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNV 503
RAG+++ A + I MP++P V G+L AC++H +LG AA L+ G +V
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 504 LMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYE 563
L+SN +AA +W + + +R ++ GI K G S I V VH F DR H + I
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 564 IVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVK 623
+A++R +++ GY PD+ L +++ EEK +++HSEKLA+A+GL+S+ PIRI K
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 639
Query: 624 NLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
NLR+C D H+ +S REIIVRD NRFH FK+G CSC DYW
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 182/362 (50%), Gaps = 6/362 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DVFV + MY + + AR+LFD++ +++ +W+ I N +G EA++ + R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
P+ I + ++ ++ + L LG LHG V+R+ + V + LID Y KCK
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF--DTDVSVCNGLIDFYGKCKQ 259
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ + +F + VSW +++A Y+ + + L+++ R++ V ++ I S++
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C + LE G+ +HA ++ + ++ + +A +DMYGKCG + FD + K+L+
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 379
Query: 265 SAMISAYAQTNCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSY 321
+++I YA +D +F +M CG PN +T VSLL C++AG++E G K S
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEA 380
GI+ + + +VDM + G ++ Y I +W + + C M G +
Sbjct: 440 RSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQL 499
Query: 381 AL 382
L
Sbjct: 500 GL 501
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 5/228 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF DV VCN +I YG+ + + +F +M K+AVSW +++ Y +N ++A L
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
R V+ S+ + S++ A + L+LG+++H + + + C + + + ++L+DMY
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV--KACVERTIFVGSALVDMY 355
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM--RREGVIPNEIT 197
KC + + FD ++V+ ++I GY H ++ + LF +M R G PN +T
Sbjct: 356 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 415
Query: 198 ILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCG 244
+SL+ C A+E G K+ + GI + +DM G+ G
Sbjct: 416 FVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/538 (40%), Positives = 314/538 (58%), Gaps = 15/538 (2%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
++ YV+ N A+S FD SW TMI GY + + LF M + N
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----N 185
Query: 195 EITILSLVK---ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
E++ +++ ECG +E K H F + VV TA I Y K A
Sbjct: 186 EVSWNAMISGYIECGDLE-----KASHFFKV--APVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 252 VF-DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+F D NK+L+ +AMIS Y + + ++ +F M + GIRPN + S L+ C++
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
+L++G+ IH + K + D TSL+ MY KCG++ ++LF +D++ WN MIS
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
G A G+ + AL LF EM + P+ ITF+ L AC+H+GL+ G F MV D+ +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ 490
P+ +HY CMVDLL RAG L+EA KLI MP RP+ V G+LL AC++HKNV+L E+AA +
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 491 FLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIM 550
L L S V ++NIYA++N+W DV+ +R+ M+++ + K PG S IE+ VH F
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 551 GDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGL 610
DR HPE I++ + E+ +K+ GY P++ L N++ E+KE L +HSEKLA+A+G
Sbjct: 539 SDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGC 598
Query: 611 ISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
I + G+ I++ KNLR+C D H A +S I REIIVRD RFHHFK+GSCSC DYW
Sbjct: 599 IKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 192/373 (51%), Gaps = 16/373 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D F N ++ Y + E A+ FD+M KDA SW+TMI Y R G +++A +L M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
++ +E++ ++I + E DL+ KA H + + GV T++I Y+K K
Sbjct: 182 ---MEKNEVSWNAMISGYIECGDLE--KASHFF----KVAPVRGVVAWTAMITGYMKAKK 232
Query: 145 LAYARSVFDGFS-GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
+ A ++F + ++V+W MI+GY+ + +G++LF M EG+ PN + S +
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C + AL+ G+ +H ++ + V T+ I MY KCG+ A +F+ ++ KD++
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYI 322
+AMIS YAQ D+ +F +M D IRP+ IT V++L+ C AG + +G + S +
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD-ILMWNVMISGCAMLGD---G 378
++ T +VD+ + G ++ +L + R ++ ++ C + +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 379 EAALELFVEMEAQ 391
E A E +++ +Q
Sbjct: 473 EFAAEKLLQLNSQ 485
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKM-VDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
R V A+I Y + +E A +F M V+K+ V+W+ MI Y N ++ L L R
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
M ++P+ + S + +EL L+LG+ +H V ++ C + V TSLI MY KC
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC--NDVTALTSLISMYCKC 332
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
L A +F+ +V+W MI+GY N ++ + LF +M + P+ IT ++++
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 203 KECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSA 249
C + G +R+ + T +D+ G+ G A
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 355/652 (54%), Gaps = 11/652 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF DV+VCN++I +Y ++G A ++F++M ++D VSW++MI Y G +L L
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
++M KP + +S + + + K+GK +H + +R+R V + TS++DMY
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR-IETGDVMVMTSILDMYS 278
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIPNEITIL 199
K ++YA +F+G +IV+W MI Y + + F KM + G+ P+ IT +
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+L+ +E G+ +H + +R G +VL TA IDMYG+CG +SA +FD + K
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+++ +++I+AY Q ++F ++ D + P+ T+ S+L A++ SL G+ IH
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIH 454
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+YI K +T + SLV MYA CGD++ + F +D++ WN +I A+ G G
Sbjct: 455 AYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGR 514
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
++ LF EM A V PN TF L ACS SG++ EG F M ++G+ P +EHYGCM
Sbjct: 515 ISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM 574
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKC 499
+DL+ R G A++ + +MP P + GSLL A + HK++ + E+AA Q +E
Sbjct: 575 LDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNT 634
Query: 500 GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETR 559
G VL+ N+YA +W DV+ I+ M GIS+ S++E G H F GDR H T
Sbjct: 635 GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATN 694
Query: 560 RIYE---IVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPG 616
+IYE +V+ M + D Y +S + + + + HS +LA +GLIS G
Sbjct: 695 KIYEVLDVVSRMVGEEDI--YVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETG 752
Query: 617 APIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+ + N R+C H SR+ REI+V D FHHF G CSC +YW
Sbjct: 753 RRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 227/454 (50%), Gaps = 10/454 (2%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHV 101
+E A QLFD+M DA W+ MI+ + GL EA+ M A VK +I
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 102 FAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
A + L+ GK +H V++ S V + SLI +Y+K A VF+ IV
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFV--SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
SW +MI+GY+ + + LF +M + G P+ + +S + C V + + GK +H
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 222 LRNGI-TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEV 280
+R+ I T V++ T+ +DMY K G+ A +F+ + ++++ + MI YA+ + +
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 281 FDIFVQMNDC-GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
F F +M++ G++P+ IT ++LL A ++ G+ IH Y ++G L+T+L+D
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLL----PASAILEGRTIHGYAMRRGFLPHMVLETALID 373
Query: 340 MYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
MY +CG + + +F +++++ WN +I+ G +ALELF E+ ++P+ T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
L A + S L EG+ + H + +V + + G L++A+K +
Sbjct: 434 IASILPAYAESLSLSEGREI-HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
++ + V S++ A +H ++ W + ++
Sbjct: 493 LLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 10/361 (2%)
Query: 118 VMRNRN--CGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN 175
V+R+R Q P T + + + + A +FD + A W MI G+
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGL 110
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
E ++ + +M GV + T ++K + +LE GK +HA ++ G V + +
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
I +Y K G A VF+ + +D++ ++MIS Y +F +M CG +P+
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR-DTKLKTSLVDMYAKCGDIDTTYRLF 354
+ +S L C+ S +MGK IH + + I+ D + TS++DMY+K G++ R+F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLL 413
R+I+ WNVMI A G A F +M Q G+ P+ IT I L A + +
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----I 346
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
EG R H G +P + ++D+ G L A+ +I D N + S++A
Sbjct: 347 LEG-RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE-VIFDRMAEKNVISWNSIIA 404
Query: 474 A 474
A
Sbjct: 405 A 405
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 3/242 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ GF + + A+I MYGE G L+ A +FD+M +K+ +SW+++I Y +NG
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL+L +++ + + P + SI+ +AE + L G+ +H Y++++R S + SL
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY--WSNTIILNSL 472
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+ MY C +L AR F+ +VSW ++I Y + LF +M V PN+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 196 ITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
T SL+ C ++ G + + GI + +D+ G+ G+F +A+ +
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 255 SI 256
+
Sbjct: 593 EM 594
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/674 (31%), Positives = 351/674 (52%), Gaps = 40/674 (5%)
Query: 32 IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPS 91
+I +Y + L A LF + ++W ++IR + L +AL +MR + P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMR-NRNCGQSGVPLSTSLIDMYVKCKNLA---- 146
S++ ++DL+ G+++HG+++R +C + +L++MY K +
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC---DLYTGNALMNMYAKLLGMGSKIS 161
Query: 147 --------------------------------YARSVFDGFSGASIVSWTTMIAGYIHTN 174
R VF+ +VS+ T+IAGY +
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ +R+ +M + P+ T+ S++ + GK +H + +R GI V + +
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+ +DMY K + VF + +D + +++++ Y Q +E +F QM ++P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+ S++ CA +L +GK +H Y+ + G + + ++LVDMY+KCG+I ++F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
D + W +I G A+ G G A+ LF EM+ QGV PN + F+ L ACSH GL+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
E F+ M +GL ++EHY + DLL RAG L+EA I M + P V +LL++
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 475 CKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEP 534
C +HKN++L E A + +++S G VLM N+YA+ +W +++ +R MR G+ K+P
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Query: 535 GVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKE 594
S IE+ H F+ GDR HP +I E + + E+++ GY D S VL ++D E K
Sbjct: 582 ACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKR 641
Query: 595 TALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRF 654
L HSE+LA+A+G+I+ PG IR+ KN+R+C D H A +S+I REIIVRD +RF
Sbjct: 642 ELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRF 701
Query: 655 HHFKEGSCSCHDYW 668
HHF G+CSC DYW
Sbjct: 702 HHFNRGNCSCGDYW 715
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 40/385 (10%)
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
K LH +R ++ + + +I +Y K L A +F +++W ++I +
Sbjct: 24 AKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
+ ++ + FV+MR G P+ S++K C + L FG+ +H F +R G+ +
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 231 VLATAFIDMYGK-----------------------CGD-------------FRSARYVFD 254
A ++MY K GD S R VF+
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ KD++ + +I+ YAQ+ ++ + +M ++P+ T+ S+L + ++ +
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
GK IH Y+ ++GI D + +SLVDMYAK I+ + R+F+ RD + WN +++G
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G AL LF +M V P + F + AC+H L GK+L H V G +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLRGGFGSNIF 379
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDM 459
+VD+ S+ G + A+K+ M
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRM 404
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 131/235 (55%), Gaps = 3/235 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ G DV++ ++++ MY + +E + ++F ++ +D +SW++++ Y +NG +E
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNE 326
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL L R M A+VKP +A S+I A L L LGK LHGYV+ R S + ++++L
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL--RGGFGSNIFIASAL 384
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+DMY KC N+ AR +FD + VSWT +I G+ + +E + LF +M+R+GV PN+
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 196 ITILSLVKECGTVEAL-EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+ ++++ C V + E ++ T G+ + A D+ G+ G A
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 312/548 (56%), Gaps = 17/548 (3%)
Query: 131 LSTSLIDMYVKCKNLAYARSVF------DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFV 184
L T LI + + +AY +F D F S++ T+ + +H + +
Sbjct: 43 LLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHC------VAYYR 96
Query: 185 KMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
+M V P+ T S++K C + AL GK +H + +G + + A + Y KCG
Sbjct: 97 RMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG 156
Query: 245 DFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
D AR VFD + K ++ ++++S + Q DE +F QM + G P+ T VSLL
Sbjct: 157 DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLS 216
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
CA+ G++ +G W+H YI +G+ + KL T+L+++Y++CGD+ +F + ++
Sbjct: 217 ACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA 276
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
W MIS G G+ A+ELF +ME G IPN++TF+ L AC+H+GL++EG+ ++ +M
Sbjct: 277 WTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI--IDMPMRPNNVVL-GSLLAACKLHKN 480
+ L+P VEH+ CMVD+L RAG LDEA K I +D + L ++L ACK+H+N
Sbjct: 337 TKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRN 396
Query: 481 VKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
LG A + ++LE G++V++SNIYA K +VS IR M + K+ G S IE
Sbjct: 397 YDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
Query: 541 VNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYH 600
V + F MGD H ET IY + + + +GY P V+ ++ EEKE AL YH
Sbjct: 457 VENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYH 516
Query: 601 SEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEG 660
SEKLA+A+GL+ A I IVKNLR+C+D H+A +S + R+I VRD+ RFHHF+ G
Sbjct: 517 SEKLAVAFGLLKTVDVA-ITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNG 575
Query: 661 SCSCHDYW 668
SCSC DYW
Sbjct: 576 SCSCLDYW 583
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 184/375 (49%), Gaps = 16/375 (4%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
G+ R + +I + ++ + LF + D ++++I++ + L +
Sbjct: 35 TGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAY 94
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST----SL 135
R M + V PS S+I A+L L++GK +H + + SG L T +L
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV------VSGFGLDTYVQAAL 148
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+ Y KC ++ AR VFD SIV+W ++++G+ +E I++F +MR G P+
Sbjct: 149 VTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDS 208
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T +SL+ C A+ G +H + + G+ ++V L TA I++Y +CGD AR VFD
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEM 314
++ ++ +AMISAY + ++F +M +DCG PN +T V++L CA AG +E
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 315 GKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMI 369
G+ ++ + K + + +VDM + G +D Y+ A +W M+
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 370 SGCAMLGDGEAALEL 384
C M + + +E+
Sbjct: 389 GACKMHRNYDLGVEI 403
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
+HA + G S L T I + +F S+ D + +++I + ++
Sbjct: 28 VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRL 87
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
+ +M + P+ T S++ CA +L +GK +H + G DT ++ +
Sbjct: 88 PLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
LV Y+KCGD++ ++F ++ I+ WN ++SG G + A+++F +M G P+
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 397 DITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
TF+ L AC+ +G + G + H+ + GL V+ +++L SR G + +A++ +
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWV-HQYIISEGLDLNVKLGTALINLYSRCGDVGKARE-V 265
Query: 457 IDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
D N ++++A H G+ A F +E CG
Sbjct: 266 FDKMKETNVAAWTAMISAYGTH---GYGQQAVELFNKMED-DCG 305
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/646 (34%), Positives = 343/646 (53%), Gaps = 44/646 (6%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RDV N++I E G + A +LFD+M ++ VSW+ M+ R+G +D+A L M
Sbjct: 95 RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQM 154
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
V A S++H + L+ GK +D +K
Sbjct: 155 PV----KDTAAWNSMVHGY-----LQFGK-----------------------VDDALK-- 180
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
+F G +++SWTTMI G E + LF M R + ++
Sbjct: 181 -------LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C A G +H ++ G ++ + I Y C +R VFD ++ + +
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+A++S Y+ ++ IF M I PN+ T S L C+ G+L+ GK +H
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K G++ D + SLV MY+ G+++ +F + I+ WN +I GCA G G+ A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP-KVEHYGCMVDL 442
+F +M P++ITF G L ACSH G L++G++LF+ M + K++HY CMVD+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 443 LSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN 502
L R G L EA++LI M ++PN +V +LL+AC++H +V GE AA +L+S
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 503 VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIY 562
VL+SNIYA+ +W +VS +R M+ GI K+PG S + + G HEF GD+ P RIY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIY 591
Query: 563 EIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIV 622
E + +REKL +GY PD + L +++ E+KE L YHSE+LA+A+GLI+ G+ + ++
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 623 KNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
KNLRVC+D H L+S + GREI++RD RFHHFK G+CSC DYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF + +V ++I Y + +R++FD+ V + W+ ++ Y N ++AL +
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
M + P++ S ++ + L L GK +HG ++ G ++ + SL+ MY
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK---LGLETDAFVGNSLVVMY 371
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
N+ A SVF SIVSW ++I G +F +M R P+EIT
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431
Query: 200 SLVKECGTVEALEFGKLLHAFTLR--NGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
L+ C LE G+ L + N I + T +D+ G+CG + A + + +
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491
Query: 258 NK-DLMICSAMISA 270
K + M+ A++SA
Sbjct: 492 VKPNEMVWLALLSA 505
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 331/614 (53%), Gaps = 10/614 (1%)
Query: 57 AVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHG 116
+ W+ +R L E++ L R M + P + I+ A L G+ LH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVS--WTTMIAGYIHTN 174
+V + C L T+LI MY KC +A AR VF+ +S +S + +I+GY +
Sbjct: 78 HVTKG-GCETEPFVL-TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ + +F +M+ GV + +T+L LV C E L G+ LH ++ G+ V +
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+FI MY KCG + R +FD + K L+ +A+IS Y+Q +V +++ QM G+ P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+ T+VS+L CA G+ ++G + ++ G + + + + MYA+CG++ +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
+ ++ W MI M G GE L LF +M +G+ P+ F+ L ACSHSGL
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
+G LF M ++ L P EHY C+VDLL RAG LDEA + I MP+ P+ V G+LL A
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 475 CKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEP 534
CK+HKNV + E A + + E + GY VLMSNIY+ + IR MR+ K+P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 535 GVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKE 594
G S +E G VH F+ GDR H +T ++ ++ E+ + + D GEE
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVS 549
Query: 595 TALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRF 654
+ HSE+LA+A+G+++ PG I ++KNLRVC+D H +S+I R+ +VRD +RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 655 HHFKEGSCSCHDYW 668
H+FK+G CSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 189/409 (46%), Gaps = 27/409 (6%)
Query: 7 ISARTRGARFCC---ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVS--WS 61
+S G + C + G + FV A+I MY + G + AR++F++ +S ++
Sbjct: 66 LSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYN 125
Query: 62 TMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN 121
+I Y N + +A + R M+ V + M+ ++ + L LG++LHG ++
Sbjct: 126 ALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG 185
Query: 122 RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIR 181
S V + S I MY+KC ++ R +FD +++W +I+GY + +
Sbjct: 186 GL--DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 182 LFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYG 241
L+ +M+ GV P+ T++S++ C + A + G + NG +V ++ A I MY
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 242 KCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVS 301
+CG+ AR VFD + K L+ +AMI Y + +F M GIRP+ V
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK------TSLVDMYAKCGDIDTTYRLFA 355
+L C+ +G + G + + +KR+ KL+ + LVD+ + G +D
Sbjct: 364 VLSACSHSGLTDKGLELF-----RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 356 A-ATDRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIPNDITF 400
+ + D +W ++ C + + E A +E E PN+I +
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE-----PNNIGY 462
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 351/651 (53%), Gaps = 47/651 (7%)
Query: 29 CNA-----IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
CN+ ++ Y + + AR++FD++ +++ + + MIR+Y NG E + + M
Sbjct: 72 CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKC 142
V+P ++ + + +G+ +HG + G S + + L+ MY KC
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK---VGLSSTLFVGNGLVSMYGKC 188
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
L+ AR V D S +VSW +++ GY ++ + + E+ + +
Sbjct: 189 GFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE----------VCREMESVKIS 238
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
+ GT+ +L L A + N T +V+ DM+ K G K L+
Sbjct: 239 HDAGTMASL-----LPAVS--NTTTENVMYVK---DMFFKMG-------------KKSLV 275
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+ MI Y + E +++ +M G P+ +++ S+L C +L +GK IH YI
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
+++ + + L+ +L+DMYAKCG ++ +F RD++ W MIS G G A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
LF +++ G++P+ I F+ L ACSH+GLL+EG+ F M + + P++EH CMVDL
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDL 455
Query: 443 LSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN 502
L RAG + EA + I DM M PN V G+LL AC++H + +G AA + L + GY
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYY 515
Query: 503 VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIY 562
VL+SNIYA +W +V++IR M+ G+ K PG S++EVN +H F++GDR HP++ IY
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIY 575
Query: 563 EIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVA-----PGA 617
+ + +K+ +GY PD + L +++ E+KET L HSEKLA+ + L++
Sbjct: 576 RELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNN 635
Query: 618 PIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
IRI KNLR+C D H A L+S+I REII+RD NRFH F+ G CSC DYW
Sbjct: 636 TIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +FV N ++ MYG+ G L AR + D+M +D VSW++++ Y +N D+AL++
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R+M ++ M S++ +
Sbjct: 230 REMESVKISHDAGTMASLLPAVSN-----------------------------------T 254
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+N+ Y + +F S+VSW MI Y+ E + L+ +M +G P+ ++I S
Sbjct: 255 TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ CG AL GK +H + R + +++L A IDMY KCG AR VF++++++D
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
++ +AMISAY + + +F ++ D G+ P+ I V+ L C+ AG LE G+
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 321 YI-DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-AATDRDILMWNVMISGCAMLGDG 378
+ D I + +VD+ + G + YR + + + +W ++ C + D
Sbjct: 435 LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDT 494
Query: 379 EAAL 382
+ L
Sbjct: 495 DIGL 498
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 14/320 (4%)
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P E T+ L + T + + +H+ + + + L + Y D SAR V
Sbjct: 38 PQE-TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKV 96
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
FD I ++++I + MI +Y E +F M C +RP+ T +L C+ +G++
Sbjct: 97 FDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
+G+ IH K G+ + LV MY KCG + + + RD++ WN ++ G
Sbjct: 157 VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL--LQEGKRLFHKMVHDFGLV 430
A + ALE+ EME+ + + T L A S++ + K +F KM
Sbjct: 217 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK---- 272
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNVKLGEWA 487
+ + M+ + + + EA +L M P+ V + S+L AC + LG+
Sbjct: 273 -SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 488 AGQFLSLESHKCGYNVLMSN 507
G +E K N+L+ N
Sbjct: 332 HGY---IERKKLIPNLLLEN 348
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/580 (37%), Positives = 328/580 (56%), Gaps = 19/580 (3%)
Query: 107 DLKLGKALHGYVMRNRNCGQSG-VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTT 165
D+ K LH + +R + + L ++ + ++ YA VFD S W T
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 166 MIAGYIH-TNNLNEGIRLFVKMRREG-VIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
+I H + E L+ KM G P++ T ++K C + GK +H ++
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
+G V + I +YG CG AR VFD + + L+ ++MI A + D +
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ---GIKRDTKLKTSLVDM 340
F +M P+ TM S+L CA GSL +G W H+++ ++ + D +K SL++M
Sbjct: 240 FREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 341 YAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM--EAQGVIPNDI 398
Y KCG + ++F RD+ WN MI G A G E A+ F M + + V PN +
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
TF+G L AC+H G + +G++ F MV D+ + P +EHYGC+VDL++RAG + EA +++
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 459 MPMRPNNVVLGSLL-AACKLHKNVKLGEWAAGQFL-------SLESHKCGYNVLMSNIYA 510
MPM+P+ V+ SLL A CK +V+L E A + S + G VL+S +YA
Sbjct: 419 MPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYA 478
Query: 511 AENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMRE 570
+ ++W DV +R+ M + GI KEPG SSIE+NG HEF GD HP+T++IY+ + + +
Sbjct: 479 SASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDD 538
Query: 571 KLDNVGYTPDIS-AVLMNIDGE-EKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVC 628
+L ++GY PD S A L++ + KE +L HSE+LA+A+GLI++ P PIRI KNLRVC
Sbjct: 539 RLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVC 598
Query: 629 DDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+D H T L+S+++ EIIVRDR RFHHFK+GSCSC DYW
Sbjct: 599 NDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 176/377 (46%), Gaps = 25/377 (6%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRN-GLLDEALDLLRDM- 83
+F+ I+ + + +A ++FD + + + W+T+IR + +EA L R M
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
P + ++ A + GK +H ++++ G V ++ LI +Y C
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD--VYVNNGLIHLYGSCG 200
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
L AR VFD S+VSW +MI + + ++LF +M+R P+ T+ S++
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLS 259
Query: 204 ECGTVEALEFGKLLHAFTLRN---GITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
C + +L G HAF LR + + V++ + I+MY KCG R A VF ++ +D
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDC--GIRPNEITMVSLLVLCAKAGSLEMGKWI 318
L +AMI +A +E + F +M D +RPN +T V LL+ C G + G+
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR-- 377
Query: 319 HSYIDKQGIKRDTKLKTSL------VDMYAKCGDIDTTYRL-FAAATDRDILMWNVMISG 371
Y D + RD ++ +L VD+ A+ G I + + D ++W ++
Sbjct: 378 -QYFDM--MVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 372 CAMLGDGEAALELFVEM 388
C G A++EL E+
Sbjct: 435 CCKKG---ASVELSEEI 448
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 6 FISARTRGARFCCE---NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWST 62
+I + G + C+ +GF DV+V N +I +YG G L+ AR++FD+M ++ VSW++
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 63 MIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR 122
MI R G D AL L R+M+ + +P M S++ A L L LG H +++R
Sbjct: 223 MIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 123 NCGQS-GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIR 181
+ + V + SLI+MY KC +L A VF G + SW MI G+ E +
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 182 LFVKM--RREGVIPNEITILSLVKEC 205
F +M +RE V PN +T + L+ C
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIAC 367
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/532 (38%), Positives = 311/532 (58%), Gaps = 6/532 (1%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP-NEITILSL 201
+++ Y+ VF ++ TMI + + EG RLF +RR +P N ++
Sbjct: 60 RDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+K C L G +H +G +L T +D+Y C + A VFD I +D
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMN---DCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+ + + S Y + +V +F +M D ++P+ +T + L CA G+L+ GK +
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H +ID+ G+ L +LV MY++CG +D Y++F +R+++ W +ISG AM G G
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH-DFGLVPKVEHYG 437
+ A+E F EM G+ P + T G L ACSHSGL+ EG F +M +F + P + HYG
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
C+VDLL RA LLD+A LI M M+P++ + +LL AC++H +V+LGE + L++
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
+ G VL+ N Y+ KW V+++R M++ I +PG S+IE+ G+VHEFI+ D HP
Sbjct: 420 EAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPR 479
Query: 558 TRRIYEIVAEMREKLDNVGYTPDISAVLMNIDG-EEKETALNYHSEKLAMAYGLISVAPG 616
IY+++AE+ ++L GY +I++ L N++ EEK AL YHSEKLA+A+G++ PG
Sbjct: 480 KEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPG 539
Query: 617 APIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
IR+ KNLR C D HN +S +Y R +IVRDR+RFHHFK GSCSC+D+W
Sbjct: 540 TTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF D + ++ +Y + A ++FD++ +D VSW+ + Y RN + L L
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 80 LRDMRV---ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPLSTSL 135
M+ VKP + + + A L L GK +H ++ N G SG + LS +L
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN---GLSGALNLSNTL 258
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+ MY +C ++ A VF G ++VSWT +I+G E I F +M + G+ P E
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 196 ITILSLVKEC 205
T+ L+ C
Sbjct: 319 QTLTGLLSAC 328
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ENG + + N ++ MY GS++ A Q+F M +++ VSW+ +I NG E
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 76 ALDLLRDMRVARVKPSEIAMISII 99
A++ +M + P E + ++
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLL 325
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 347/645 (53%), Gaps = 11/645 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF V VCN ++ MY G A +F +M KD +SW++++ ++ +G +AL LL
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV----PLSTSLI 136
M + + + S + + G+ LHG V+ SG+ + +L+
Sbjct: 334 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV------VSGLFYNQIIGNALV 387
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
MY K ++ +R V +V+W +I GY + ++ + F MR EGV N I
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447
Query: 197 TILSLVKECGTV-EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T++S++ C + LE GK LHA+ + G + + I MY KCGD S++ +F+
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
++N++++ +AM++A A +EV + +M G+ ++ + L AK LE G
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 567
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H K G + D+ + + DMY+KCG+I ++ + +R + WN++IS
Sbjct: 568 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 627
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
G E F EM G+ P +TF+ L ACSH GL+ +G + + DFGL P +EH
Sbjct: 628 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 687
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
C++DLL R+G L EA+ I MPM+PN++V SLLA+CK+H N+ G AA LE
Sbjct: 688 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 747
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
VL SN++A +W DV ++R+ M I K+ S +++ V F +GDR H
Sbjct: 748 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 807
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAP 615
P+T IY + ++++ + GY D S L + D E+KE L HSE+LA+AY L+S
Sbjct: 808 PQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPE 867
Query: 616 GAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEG 660
G+ +RI KNLR+C D H+ +SR+ GR I++RD+ RFHHF+ G
Sbjct: 868 GSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 218/463 (47%), Gaps = 3/463 (0%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++G DV+V AI+ +YG G + +R++F++M D++ VSW++++ Y G +E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+D+ + MR V +E +M +I L D LG+ + G V+++ +S + + SL
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL--ESKLAVENSL 184
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I M N+ YA +FD S +SW ++ A Y ++ E R+F MRR N
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T+ +L+ G V+ ++G+ +H ++ G V + + MY G A VF
Sbjct: 245 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 304
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ KDL+ +++++++ + + M G N +T S L C E G
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H + G+ + + +LV MY K G++ + R+ RD++ WN +I G A
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
D + AL F M +GV N IT + L AC G L E + H + G
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 484
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++ + ++ G L +Q L + R N + ++LAA H
Sbjct: 485 KNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHH 526
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 198/412 (48%), Gaps = 4/412 (0%)
Query: 52 MVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDL-KL 110
M ++ VSW+TM+ R GL E ++ R M +KPS + S++ + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
G +HG+V ++ S V +ST+++ +Y ++ +R VF+ ++VSWT+++ GY
Sbjct: 61 GVQVHGFVAKSGLL--SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
E I ++ MR EGV NE ++ ++ CG ++ G+ + +++G+ +
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+ + I M G G+ A Y+FD + +D + +++ +AYAQ I+E F IF M
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
N T+ +LL + + G+ IH + K G + +L+ MYA G
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
+F +D++ WN +++ G AL L M + G N +TF AL AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
++G R+ H +V GL +V + + G + E++++++ MP R
Sbjct: 359 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/724 (29%), Positives = 361/724 (49%), Gaps = 80/724 (11%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++G D ++ +I Y A + + D S+S++I + L +++
Sbjct: 43 KSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIG 102
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST----S 134
+ M + P + ++ V AEL K+GK +H +C SG+ + S
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV-----SC-VSGLDMDAFVQGS 156
Query: 135 LIDMYVKCKNLAYARSVFDGFSG-----------------------------------AS 159
+ MY++C + AR VFD S A+
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
IVSW +++G+ + E + +F K+ G P+++T+ S++ G E L G+L+H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID- 278
+ ++ G+ + +A IDMYGK G +F+ E + +C+A I+ ++ +D
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 279 ----------------------------------EVFDIFVQMNDCGIRPNEITMVSLLV 304
E ++F +M G++PN +T+ S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
C +L G+ H + + + + + ++L+DMYAKCG I+ + +F ++++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
WN +++G +M G + + +F + + P+ I+F L AC GL EG + F M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
++G+ P++EHY CMV+LL RAG L EA LI +MP P++ V G+LL +C+L NV L
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 485 EWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGS 544
E AA + LE G VL+SNIYAA+ W +V IR M G+ K PG S I+V
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 545 VHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKL 604
V+ + GD+ HP+ +I E + E+ +++ G+ P++ L +++ +E+E L HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 605 AMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSC 664
A+ +GL++ G P++++KNLR+C D H +S GREI +RD NRFHHFK+G CSC
Sbjct: 697 AVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSC 756
Query: 665 HDYW 668
D+W
Sbjct: 757 GDFW 760
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 201/449 (44%), Gaps = 77/449 (17%)
Query: 18 CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
C +G D FV ++ MY G + AR++FD+M DKD V+ S ++ Y R G L+E +
Sbjct: 143 CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVV 202
Query: 78 DLLRDMRVARVK-----------------------------------PSEIAMISIIHVF 102
+L +M + ++ P ++ + S++
Sbjct: 203 RILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 103 AELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGF------- 155
+ L +G+ +HGYV++ V +++IDMY K ++ S+F+ F
Sbjct: 263 GDSEMLNMGRLIHGYVIKQGLLKDKCV--ISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 156 -----SGAS-----------------------IVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
+G S +VSWT++IAG E + LF +M+
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
GV PN +TI S++ CG + AL G+ H F +R + +V + +A IDMY KCG
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN 440
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
++ VF+ + K+L+ +++++ ++ EV IF + ++P+ I+ SLL C
Sbjct: 441 LSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
Query: 308 KAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMW 365
+ G + G K+ ++ GIK + + +V++ + G + Y L + D +W
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVW 560
Query: 366 NVMISGCAMLGD---GEAALELFVEMEAQ 391
+++ C + + E A E +E +
Sbjct: 561 GALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 326/630 (51%), Gaps = 40/630 (6%)
Query: 72 LLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVP 130
LL EA+ LL + KP ++I V ++ L+ GK +H ++ R G G+
Sbjct: 69 LLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHI---RTSGFVPGIV 121
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM---- 186
+ L+ MY KC +L AR VFD + SW M+ GY L E +LF +M
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
Query: 187 ----------------------------RREGVIPNEITILSLVKECGTVEALEFGKLLH 218
R PN T+ V V+ + GK +H
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+R G+ VL ++ +DMYGKCG AR +FD I KD++ ++MI Y +++
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
E F +F ++ RPNE T +L CA + E+GK +H Y+ + G + +SLV
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 339 DMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
DMY KCG+I++ + D++ W +I GCA G + AL+ F + G P+ +
Sbjct: 362 DMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHV 421
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
TF+ L AC+H+GL+++G F+ + L +HY C+VDLL+R+G ++ + +I +
Sbjct: 422 TFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISE 481
Query: 459 MPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV 518
MPM+P+ + S+L C + N+ L E AA + +E V M+NIYAA KW +
Sbjct: 482 MPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEE 541
Query: 519 SDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYT 578
+R+ M++ G++K PG S E+ H FI D HP +I E + E+R+K+ GY
Sbjct: 542 GKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Query: 579 PDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLL 638
P S VL +++ E+KE L YHSEKLA+A+ ++S G I++ KNLR C D H A +
Sbjct: 602 PATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFI 661
Query: 639 SRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
S I R+I VRD RFH F+ G CSC DYW
Sbjct: 662 SNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 210/411 (51%), Gaps = 20/411 (4%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
+RD+ N ++ Y EVG LE AR+LFD+M +KD+ SW+ M+ Y + +EAL L
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 83 M-RVARVKPSEIAMISIIHVFAELVD-LKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
M RV +P+ I +SI A V ++ GK +HG+++R G S L +SL+DMY
Sbjct: 208 MQRVPNSRPN-IFTVSIAVAAAAAVKCIRRGKEIHGHIVR---AGLDSDEVLWSSLMDMY 263
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC + AR++FD +VSWT+MI Y ++ EG LF ++ PNE T
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
++ C + E GK +H + R G +++ +DMY KCG+ SA++V D
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWI 318
DL+ +++I AQ DE F + G +P+ +T V++L C AG +E G ++
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGD 377
+S +K + + T LVD+ A+ G + + + + +W ++ GC+ G+
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 378 ----GEAALELF-VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
EAA ELF +E E N +T++ + +G +E ++ +M
Sbjct: 504 IDLAEEAAQELFKIEPE------NPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 34/382 (8%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G D + ++++ MYG+ G ++ AR +FDK+V+KD VSW++MI Y ++ E L
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL-STSLIDMY 139
++ + +P+E +++ A+L +LGK +HGY+ R G S+SL+DMY
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR---VGFDPYSFASSSLVDMY 364
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC N+ A+ V DG +VSWT++I G +E ++ F + + G P+ +T +
Sbjct: 365 TKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424
Query: 200 SLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+++ C +E G + ++ T ++ ++ + T +D+ + G F + V +
Sbjct: 425 NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
Query: 259 KDLMICSAMI----SAYAQTNCIDEVFDIFVQMNDCGIRP-NEITMVSLLVLCAKAGSLE 313
K A + S Y + +E + I P N +T V++ + A AG E
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFK-----IEPENPVTYVTMANIYAAAGKWE 539
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
+ + + G+ + + +S ++ K R A D M+N ++
Sbjct: 540 EEGKMRKRMQEIGVTK--RPGSSWTEIKRK--------RHVFIAADTSHPMYNQIV---- 585
Query: 374 MLGDGEAALELFVEMEAQGVIP 395
E EL +M+ +G +P
Sbjct: 586 -----EFLRELRKKMKEEGYVP 602
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 353/661 (53%), Gaps = 10/661 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++G ++ N +I MY + A ++FD M +++ VSWS ++ + NG L
Sbjct: 31 YLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKG 90
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+L L +M + P+E + + L L+ G +HG+ ++ + V + SL
Sbjct: 91 SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF--EMMVEVGNSL 148
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI--P 193
+DMY KC + A VF S++SW MIAG++H ++ + F M+ + P
Sbjct: 149 VDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERP 208
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGI--TISVVLATAFIDMYGKCGDFRSARY 251
+E T+ SL+K C + + GK +H F +R+G S + + +D+Y KCG SAR
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 252 VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
FD I+ K ++ S++I YAQ E +F ++ + + + + S++ + A
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
L GK + + K +T + S+VDMY KCG +D + FA +D++ W V+I+G
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
G G+ ++ +F EM + P+++ ++ L ACSHSG+++EG+ LF K++ G+ P
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
+VEHY C+VDLL RAG L EA+ LI MP++PN + +LL+ C++H +++LG+
Sbjct: 449 RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 508
Query: 492 LSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMG 551
L +++ V+MSN+Y W + + R G+ KE G+S +E+ VH F G
Sbjct: 509 LRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSG 568
Query: 552 DREHPETRRIYEIVAEMREKL-DNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGL 610
+ HP T I E + E +L + +GY + L +ID E KE L HSEKLA+ L
Sbjct: 569 EDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLAL 628
Query: 611 ISVA---PGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDY 667
+ G IR+ KNLRVC D H LS+I +VRD RFH F++G CSC DY
Sbjct: 629 ATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 688
Query: 668 W 668
W
Sbjct: 689 W 689
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 4/268 (1%)
Query: 191 VIPNE-ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+IPN+ ++S+++ C + G +H + L++G ++++ + IDMY KC + A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
VFDS+ ++++ SA++S + + +F +M GI PNE T + L C
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
+LE G IH + K G + ++ SLVDMY+KCG I+ ++F DR ++ WN MI
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 370 SGCAMLGDGEAALELFVEMEAQGVI--PNDITFIGALKACSHSGLLQEGKRLFHKMVHD- 426
+G G G AL+ F M+ + P++ T LKACS +G++ GK++ +V
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
F G +VDL + G L A+K
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARK 268
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/630 (35%), Positives = 346/630 (54%), Gaps = 5/630 (0%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G +++ARQ+FD M ++ V+W+++I ++ EA+++ R M V P E + S+
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
F++L K + HG + S V + ++L+DMYVK A+ V D
Sbjct: 173 KAFSDLSLEKEAQRSHGLAVI-LGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKD 231
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+V T +I GY E ++ F M E V PNE T S++ CG ++ + GKL+H
Sbjct: 232 VVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHG 291
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
+++G ++ T+ + MY +C + VF IE + + +++IS Q +
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 280 VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
F +M I+PN T+ S L C+ E G+ IH + K G RD + L+D
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 340 MYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
+Y KCG D +F ++ D++ N MI A G G AL+LF M G+ PND+T
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVT 471
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+ L AC++S L++EG LF D ++ +HY CMVDLL RAG L+EA+ L ++
Sbjct: 472 VLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVS 519
+ P+ V+ +LL+ACK+H+ V++ E + L +E G +LMSN+YA+ KW V
Sbjct: 531 -INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVI 589
Query: 520 DIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR-EHPETRRIYEIVAEMREKLDNVGYT 578
+++ M+D + K P +S +E+N H F+ GD HP + +I E + E+ +K ++GY
Sbjct: 590 EMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYV 649
Query: 579 PDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLL 638
D S V +++ KE +L+ HSEKLA+A+ + G IRI+KNLRVC D H+ ++
Sbjct: 650 EDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNV-GGSIRILKNLRVCVDCHSWIKIV 708
Query: 639 SRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
SR+ REII RD RFHHF++GSCSC DYW
Sbjct: 709 SRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 2/350 (0%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
+VFV +A++ MY + G A+ + D++ +KD V + +I Y + G EA+ + M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
V +V+P+E S++ L D+ GK +HG ++ ++ +S + TSL+ MY++C
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV--KSGFESALASQTSLLTMYLRCSL 317
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ + VF + VSWT++I+G + + F KM R+ + PN T+ S ++
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C + E G+ +H + G + ID+YGKCG AR VFD++ D++
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISL 437
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ MI +YAQ E D+F +M + G++PN++T++S+L+ C + +E G + K
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK 497
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
I +VD+ + G ++ L + D+++W ++S C +
Sbjct: 498 DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKV 547
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 187/397 (47%), Gaps = 39/397 (9%)
Query: 126 QSGVPLSTS---LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
+SG P S L+D +KC ++ YAR VFDG S IV+W ++IA I E + +
Sbjct: 93 KSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEM 152
Query: 183 FVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYG 241
+ M V+P+E T+ S+ K + + + H + G+ +S V + +A +DMY
Sbjct: 153 YRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 212
Query: 242 KCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVS 301
K G R A+ V D +E KD+++ +A+I Y+Q E F M ++PNE T S
Sbjct: 213 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
+L+ C + GK IH + K G + +TSL+ MY +C +D + R+F +
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPN 332
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
+ W +ISG G E AL F +M + PN T AL+ CS+ + +EG+++ H
Sbjct: 333 QVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-H 391
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ---------------------------- 453
+V +G ++DL + G D A+
Sbjct: 392 GIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 454 ------KLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
+ +I++ ++PN+V + S+L AC + V+ G
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++GF + +++ MY ++ + ++F + + VSW+++I +NG + AL
Sbjct: 295 KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALI 354
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM-----RNRNCGQSGVPLST 133
R M +KP+ + S + + L + G+ +HG V R++ G +
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG-------S 407
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
LID+Y KC AR VFD S ++S TMI Y E + LF +M G+ P
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
N++T+LS++ C +E G L ++ I ++ +D+ G+ G A +
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLT 527
Query: 254 DSIENKDLMICSAMISA 270
+ N DL++ ++SA
Sbjct: 528 TEVINPDLVLWRTLLSA 544
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/631 (34%), Positives = 343/631 (54%), Gaps = 44/631 (6%)
Query: 41 SLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM-RVARVKPSEIAMISII 99
+L +AR+L + DA ++T++R Y + ++ + +M R V P + +I
Sbjct: 54 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
L+ G +H +++ +S + + T+LI MY C + +AR VFD +
Sbjct: 114 KAVENFRSLRTGFQMHCQALKHGL--ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN 171
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+V+W +I N++ +F KM
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKM--------------------------------- 198
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
+RN + +V+LA Y K G+ SA+ +F + ++D + S MI A +E
Sbjct: 199 -LVRNHTSWNVMLAG-----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 280 VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
F F ++ G+ PNE+++ +L C+++GS E GK +H +++K G + +L+D
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 340 MYAKCGDIDTTYRLFAAATD-RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
MY++CG++ +F + R I+ W MI+G AM G GE A+ LF EM A GV P+ I
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
+FI L ACSH+GL++EG+ F +M + + P++EHYGCMVDL R+G L +A I
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 459 MPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV 518
MP+ P +V +LL AC H N++L E + L+ + G VL+SN YA KW DV
Sbjct: 433 MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDV 492
Query: 519 SDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKL-DNVGY 577
+ IR++M I K S +EV ++++F G+++ +E + E+ +L D GY
Sbjct: 493 ASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGY 552
Query: 578 TPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATML 637
TP++++ L +++ EEKE ++ HSEKLA+A+ L ++ GA IRIVKNLR+C D H L
Sbjct: 553 TPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKL 612
Query: 638 LSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
S++YG EI+VRDRNRFH FK+GSCSC DYW
Sbjct: 613 TSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 38/314 (12%)
Query: 13 GARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGL 72
GAR + R+ N ++ Y + G LE A+++F +M +D VSWSTMI NG
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPL 131
+E+ R+++ A + P+E+++ ++ ++ + GK LHG+V + G S V +
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK---AGYSWIVSV 306
Query: 132 STSLIDMYVKCKNLAYARSVFDGFSGAS-IVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
+ +LIDMY +C N+ AR VF+G IVSWT+MIAG E +RLF +M G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V P+ I+ +SL+ C +E G+ + R V I+ YG
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKR------VYHIEPEIEHYG--------- 411
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
M+ Y ++ + + +D QM I P I +LL C+ G
Sbjct: 412 ---------------CMVDLYGRSGKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHG 453
Query: 311 SLEMGKWIHSYIDK 324
++E+ + + +++
Sbjct: 454 NIELAEQVKQRLNE 467
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 336/630 (53%), Gaps = 75/630 (11%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++GF ++F+ N +I Y + GSLE RQ+FDKM ++ +W++++ + G LDEA
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADS 107
Query: 79 LLRDM----------------RVARVKPS---------------EIAMISIIHVFAELVD 107
L R M + R + + E + S++ + L D
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMI 167
+ G +H + ++ S V + ++L+DMY KC N+ A+ VFD ++VSW ++I
Sbjct: 168 MNKGVQVHSLIAKSPFL--SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 168 AGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG-I 226
+ E + +F M V P+E+T+ S++ C ++ A++ G+ +H ++N +
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYA-------------- 272
++L+ AF+DMY KC + AR++FDS+ ++++ ++MIS YA
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 273 -----------------QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
Q +E +F + + P + ++L CA L +G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 316 KWIHSYIDKQGIK------RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
H ++ K G K D + SL+DMY KCG ++ Y +F +RD + WN MI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
G A G G ALELF EM G P+ IT IG L AC H+G ++EG+ F M DFG+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAG 489
P +HY CMVDLL RAG L+EA+ +I +MPM+P++V+ GSLLAACK+H+N+ LG++ A
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 490 QFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFI 549
+ L +E G VL+SN+YA KW DV ++R++MR G++K+PG S I++ G H F+
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 550 MGDREHPETRRIYE----IVAEMREKLDNV 575
+ D+ HP ++I+ ++AEMR + D+
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPEQDHT 675
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 74/425 (17%)
Query: 102 FAELVDLKLGKALHGYVMRNRNCG--QSG----VPLSTSLIDMYVKCKNLAYARSVFDG- 154
FA+L+D + L +R + +SG + + LID Y KC +L R VFD
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 155 -----FSGASIV-------------------------SWTTMIAGYIHTNNLNEGIRLFV 184
++ S+V +W +M++G+ + E + F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 185 KMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
M +EG + NE + S++ C + + G +H+ ++ V + +A +DMY KCG
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 245 DFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
+ A+ VFD + +++++ +++I+ + Q E D+F M + + P+E+T+ S++
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 305 LCAKAGSLEMGKWIHSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLF--------- 354
CA ++++G+ +H + K ++ D L + VDMYAKC I +F
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 355 -----------AAAT-----------DRDILMWNVMISGCAMLGDGEAALELFVEMEAQG 392
AA+T +R+++ WN +I+G G+ E AL LF ++ +
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 393 VIPNDITFIGALKACSHSGLLQEGKRL-FHKMVHDFGLVPKVEH----YGCMVDLLSRAG 447
V P +F LKAC+ L G + H + H F E ++D+ + G
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 448 LLDEA 452
++E
Sbjct: 442 CVEEG 446
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 11/281 (3%)
Query: 1 MLSHTFIS-----ARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK 55
+LS+ F+ +R + ARF ++ R+V ++I Y S + AR +F KM ++
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 56 DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH 115
+ VSW+ +I Y +NG +EAL L ++ V P+ + +I+ A+L +L LG H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 116 GYVMRNRNCGQSG----VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
+V+++ QSG + + SLIDMYVKC + VF VSW MI G+
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN-GITISV 230
NE + LF +M G P+ IT++ ++ CG +E G+ + R+ G+
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIE-NKDLMICSAMISA 270
T +D+ G+ G A+ + + + D +I ++++A
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++G D+FV N++I MY + G +E +F KM+++D VSW+ MI + +NG +E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS--- 132
AL+L R+M + KP I MI ++ ++ G+ H + R+ G + PL
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVA--PLRDHY 532
Query: 133 TSLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAG-YIHTN 174
T ++D+ + L A+S+ + V W +++A +H N
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/614 (34%), Positives = 326/614 (53%), Gaps = 39/614 (6%)
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK--CKNLAYAR 149
E+ + S+I + ++L K +HG+V+R + QS L T LI K YAR
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLR-KGLDQSCYIL-TKLIRTLTKLGVPMDPYAR 103
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
V + + WT +I GY +E I ++ MR+E + P T +L+K CGT++
Sbjct: 104 RVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK 163
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD--------------- 254
L G+ HA T R V + IDMY KC AR VFD
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIA 223
Query: 255 ----------------SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
S+ KD++ +AM++ +AQ E + F +M GIR +E+T
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK--LKTSLVDMYAKCGDIDTTYRLFAA 356
+ + CA+ G+ + K G + ++L+DMY+KCG+++ +F +
Sbjct: 284 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS 343
Query: 357 ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQE 415
++++ ++ MI G A G + AL LF M Q I PN +TF+GAL ACSHSGL+ +
Sbjct: 344 MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403
Query: 416 GKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC 475
G+++F M FG+ P +HY CMVDLL R G L EA +LI M + P+ V G+LL AC
Sbjct: 404 GRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGAC 463
Query: 476 KLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPG 535
++H N ++ E AA LE G +L+SN+YA+ WG V +R+ +++ G+ K P
Sbjct: 464 RIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPA 523
Query: 536 VS-SIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKE 594
VS ++ NG +H+F G+ HP + +I + + E+ E+L +GY PD+S+V ++ K
Sbjct: 524 VSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKR 583
Query: 595 TALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRF 654
L H+EKLA+A+ L++ + I I+KNLR+C D H L S + G+ II+RD RF
Sbjct: 584 LILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRF 643
Query: 655 HHFKEGSCSCHDYW 668
HHF+ G CSC D+W
Sbjct: 644 HHFRSGDCSCGDFW 657
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 178/410 (43%), Gaps = 43/410 (10%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSL--EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
G + ++ +I ++G +AR++ + + ++ W+ +IR Y G DEA+
Sbjct: 76 GLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIA 135
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ MR + P +++ + DL LG+ H R R G V + ++IDM
Sbjct: 136 MYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR--GFCFVYVGNTMIDM 193
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL---------------------- 176
YVKC+++ AR VFD ++SWT +IA Y N+
Sbjct: 194 YVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMV 253
Query: 177 ---------NEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGIT 227
E + F +M + G+ +E+T+ + C + A ++ ++G +
Sbjct: 254 TGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYS 313
Query: 228 IS--VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
S VV+ +A IDMY KCG+ A VF S+ NK++ S+MI A E +F
Sbjct: 314 PSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFH 373
Query: 286 QM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH-SYIDKQGIKRDTKLKTSLVDMYAK 343
M I+PN +T V L+ C+ +G ++ G+ + S G++ T +VD+ +
Sbjct: 374 YMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGR 433
Query: 344 CGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD---GEAALELFVEME 389
G + L + + +W ++ C + + E A E E+E
Sbjct: 434 TGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 320/575 (55%), Gaps = 5/575 (0%)
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
S+I V ++L + LH V+++ + + L+ Y++ + A +FD
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFI--GDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKM--RREGVIPNEITILSLVKECGTVEALEFG 214
+VSW ++I+GY L + + +M G PNE+T LS++ C + E G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+ +H ++ G+ V + AFI+ YGK GD S+ +F+ + K+L+ + MI + Q
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
++ F G P++ T +++L C G + + + IH I G + +
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
T+L+D+Y+K G ++ + +F T D + W M++ A G G A++ F M G+
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
P+ +TF L ACSHSGL++EGK F M + + P+++HY CMVDLL R+GLL +A
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 455 LIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENK 514
LI +MPM P++ V G+LL AC+++K+ +LG AA + LE V++SNIY+A
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 515 WGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDN 574
W D S IR M+ G+ + G S IE +H+F++GD HPE+ +I + + E+R+K+ +
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Query: 575 -VGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHN 633
+GY VL ++ + KE +N HSEK+AMA+GL+ V+P PI I KNLR+C D H
Sbjct: 514 EMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHE 573
Query: 634 ATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+S I R II+RD RFHHF +GSCSC DYW
Sbjct: 574 TAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 193/406 (47%), Gaps = 17/406 (4%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
+R F+ + ++ Y +G A +LFD+M ++D VSW+++I Y G L + ++L
Sbjct: 63 YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSR 122
Query: 83 MRVARV--KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M ++ V +P+E+ +S+I + G+ +HG VM+ + V + + I+ Y
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE--VKVVNAFINWYG 180
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K +L + +F+ S ++VSW TMI ++ +G+ F RR G P++ T L+
Sbjct: 181 KTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLA 240
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+++ C + + + +H + G + + + TA +D+Y K G + VF I + D
Sbjct: 241 VLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD 300
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
M +AM++AYA + F M GI P+ +T LL C+ +G +E GK
Sbjct: 301 SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE 360
Query: 321 YIDKQGIKRDTKLK--TSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD 377
+ K+ + D +L + +VD+ + G + Y L + +W ++ C + D
Sbjct: 361 TMSKR-YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 378 ---GEAALELFVEMEAQGVIPND-ITFIGALKACSHSGLLQEGKRL 419
G A E E+E P D ++ S SGL ++ R+
Sbjct: 420 TQLGTKAAERLFELE-----PRDGRNYVMLSNIYSASGLWKDASRI 460
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +V V NA I YG+ G L + +LF+ + K+ VSW+TMI + +NGL ++ L
Sbjct: 164 GVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R +P + ++++ ++ ++L + +HG +M G + +T+L+D+Y
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI--TTALLDLYS 281
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K L + +VF + ++WT M+A Y + I+ F M G+ P+ +T
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTH 341
Query: 201 LVKECGTVEALEFGK-LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
L+ C +E GK + R I + + +D+ G+ G + A
Sbjct: 342 LLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 311/545 (57%), Gaps = 10/545 (1%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVS---WTTMIAGYIHTNNLNEGIRLFVKMR 187
L + LI ++ C+ L AR +FD + +S+++ W M GY + + + ++V M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+ P +I +K C ++ L G+ +HA ++ + V+ + +Y + G F
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
AR VFD + ++++ +++IS ++ + E+F++F +M + I + T+ ++L C+
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
+ +L GK IH+ I K K D L SL+DMY KCG+++ + R+F +D+ WN+
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
M++ A+ G+ E + LF M GV P+ ITF+ L CS +GL + G LF +M +F
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWA 487
+ P +EHY C+VD+L RAG + EA K+I MP +P+ + GSLL +C+LH NV +GE A
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 488 AGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHE 547
A + LE H G V++SNIYA W +V IR M+ G+ KE G S ++V +
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Query: 548 FIMGD----REHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEK 603
F+ G R E ++++ E++E ++ GY+P+ S VL ++D E K + HSE+
Sbjct: 589 FVAGGGYEFRNSDEYKKVW---TELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSER 645
Query: 604 LAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCS 663
LA Y LI G PIRI KNLRVC D H+ ++S++ R I++RD RFHHF +G CS
Sbjct: 646 LATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICS 705
Query: 664 CHDYW 668
C DYW
Sbjct: 706 CKDYW 710
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 197/400 (49%), Gaps = 17/400 (4%)
Query: 2 LSHTFISART--RGARFCC----ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK 55
L H ISA++ G + C + + + +I ++ L+ AR++FD + D
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 56 DAVS---WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGK 112
++ W+ M Y RNG +AL + DM + ++P ++ + +L DL++G+
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 113 ALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIH 172
+H +++ + V L+ +Y++ AR VFDG S ++V+W ++I+
Sbjct: 257 GIHAQIVKRKEKVDQVV--YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 173 TNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
++E LF KM+ E + + T+ +++ C V AL GK +HA L++ V L
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
+ +DMYGKCG+ +R VFD + KDL + M++ YA I+EV ++F M + G+
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 293 RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTY 351
P+ IT V+LL C+ G E G + + + + + LVD+ + G I
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494
Query: 352 RLFAAATDR-DILMWNVMISGCAMLGD---GE-AALELFV 386
++ + +W +++ C + G+ GE AA ELFV
Sbjct: 495 KVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFV 534
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 315/552 (57%), Gaps = 3/552 (0%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
N+++ MY + G + A +LF M D V+W+ MI Y ++GL++E+L +M + V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
P I S++ ++ +L+ K +H Y+MR+ + L+++LID Y KC+ ++ A+
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI--SLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
++F + +V +T MI+GY+H + + +F + + + PNEIT++S++ G +
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
AL+ G+ LH F ++ G + A IDMY KCG A +F+ + +D++ ++MI+
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
AQ++ DIF QM GI + +++ + L CA S GK IH ++ K +
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 330 DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM- 388
D +++L+DMYAKCG++ +F +++I+ WN +I+ C G + +L LF EM
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
E G+ P+ ITF+ + +C H G + EG R F M D+G+ P+ EHY C+VDL RAG
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 449 LDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI 508
L EA + + MP P+ V G+LL AC+LHKNV+L E A+ + + L+ GY VL+SN
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 509 YAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEM 568
+A +W V+ +R M++ + K PG S IE+N H F+ GD HPE+ IY ++ +
Sbjct: 756 HANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Query: 569 REKLDNVGYTPD 580
+L GY P
Sbjct: 816 LGELRLEGYIPQ 827
Score = 246 bits (627), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 242/464 (52%), Gaps = 20/464 (4%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA 86
FV +++I Y E G ++ +LFD+++ KD V W+ M+ Y + G LD + MR+
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV----PLSTSLIDMYVKC 142
++ P+ + ++ V A + + LG LHG V+ SGV + SL+ MY KC
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV------VSGVDFEGSIKNSLLSMYSKC 287
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
A +F S A V+W MI+GY+ + + E + F +M GV+P+ IT SL+
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
E LE+ K +H + +R+ I++ + L +A ID Y KC A+ +F + D++
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+ +AMIS Y + ++F + I PNEIT+VS+L + +L++G+ +H +I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
K+G + +++DMYAKCG ++ Y +F + RDI+ WN MI+ CA + AA+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF----GLVPKVEHYGC 438
++F +M G+ + ++ AL AC++ L E F K +H F L V
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACAN--LPSES---FGKAIHGFMIKHSLASDVYSEST 582
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK 482
++D+ ++ G L A + M + N V S++AAC H +K
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLK 625
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 213/469 (45%), Gaps = 10/469 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM-VDKDAV-SWSTMIRNYGRNGLL 73
F N D + I+ MY GS ++F ++ + + ++ W+++I ++ RNGLL
Sbjct: 60 FLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLL 119
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR-NRNCGQSGVPLS 132
++AL M V P ++ L + K L V +C + ++
Sbjct: 120 NQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF---VA 176
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
+SLI Y++ + +FD V W M+ GY L+ I+ F MR + +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
PN +T ++ C + ++ G LH + +G+ + + + MY KCG F A +
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F + D + + MIS Y Q+ ++E F +M G+ P+ IT SLL +K +L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
E K IH YI + I D L ++L+D Y KC + +F+ D++++ MISG
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
G +LE+F + + PN+IT + L L+ G+ L H + G +
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL-HGFIIKKGFDNR 475
Query: 433 VEHYGC-MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
+ GC ++D+ ++ G ++ A ++ + R + V S++ C N
Sbjct: 476 C-NIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDN 522
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFD--GFSGASIVSWTT 165
L+ GK +H +++ N G S ++ MY C + + +F +SI W +
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYT--DERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNS 108
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
+I+ ++ LN+ + + KM GV P+ T LVK C ++ + L G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 226 ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
+ + +A++ I Y + G +FD + KD +I + M++ YA+ +D V F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M I PN +T +L +CA +++G +H + G+ + +K SL+ MY+KCG
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
D +LF + D + WN MISG G E +L F EM + GV+P+ ITF L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 406 ACSHSGLLQEGKRL 419
+ S L+ K++
Sbjct: 349 SVSKFENLEYCKQI 362
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F + GF + A+I MY + G + A ++F+++ +D VSW++MI ++
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+D+ R M V+ + +++ + + A L GKA+HG+++++ S V ++L
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS--LASDVYSESTL 583
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM-RREGVIPN 194
IDMY KC NL A +VF +IVSW ++IA + L + + LF +M + G+ P+
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 195 EITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+IT L ++ C V ++ G + + T GI +D++G+ G A
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 13/274 (4%)
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
E IP +++L ++ C L GK +HAF + N I+ + MY CG F
Sbjct: 31 EETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 249 ARYVFDSIE--NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
+F ++ + +++IS++ + +++ + +M G+ P+ T L+ C
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
+ + ++ + G+ + + +SL+ Y + G ID +LF +D ++WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
VM++G A G ++ ++ F M + PN +TF L C+ L+ G +L H
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-----HG 263
Query: 427 FGLVPKVEHYG----CMVDLLSRAGLLDEAQKLI 456
+V V+ G ++ + S+ G D+A KL
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 292/524 (55%), Gaps = 6/524 (1%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F RD +V NA++ MY G +E AR +FD M ++D +SW+TMI Y RNG +++AL +
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
M V ++S++ V L DL++G+ +H V R + + + +L++MY+K
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK--IEVKNALVNMYLK 265
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
C + AR VFD +++WT MI GY ++ + L M+ EGV PN +TI SL
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
V CG + GK LH + +R + +++ T+ I MY KC VF
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
SA+I+ Q + + +F +M + PN T+ SLL A L IH Y
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGD 377
+ K G T LV +Y+KCG +++ +++F ++ D+++W +ISG M GD
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
G AL++F+EM GV PN+ITF AL ACSHSGL++EG LF M+ + + + HY
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
C+VDLL RAG LDEA LI +P P + V G+LLAAC H+NV+LGE AA + LE
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
G VL++NIYAA +W D+ +R M + G+ K+PG S+IE+
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 230/456 (50%), Gaps = 8/456 (1%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR 87
+ + + + Y G + +AR+LF++M +S++ +IR Y R GL +A+ + M
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 88 VK--PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
VK P + EL +KLG +HG ++R+ V +L+ MY+ +
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYV--QNALLAMYMNFGKV 168
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
AR VFD ++SW TMI+GY +N+ + +F M E V + TI+S++ C
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
G ++ LE G+ +H + + + A ++MY KCG AR+VFD +E +D++ +
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
MI+ Y + ++ ++ M G+RPN +T+ SL+ +C A + GK +H + +Q
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
+ D ++TSL+ MYAKC +D +R+F+ A+ W+ +I+GC AL LF
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSR 445
M + V PN T L A + L++ + H + G + ++ +V + S+
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 446 AGLLDEAQKLI--IDMPMRPNNVVL-GSLLAACKLH 478
G L+ A K+ I + +VVL G+L++ +H
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 172/325 (52%), Gaps = 5/325 (1%)
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
S+++ FA + KALH +V+ SG LST L Y C ++ YAR +F+
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRV--SGHILST-LSVTYALCGHITYARKLFEEMP 76
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV--IPNEITILSLVKECGTVEALEFG 214
+S++S+ +I Y+ ++ I +F++M EGV +P+ T + K G +++++ G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
++H LR+ + A + MY G AR VFD ++N+D++ + MIS Y +
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
+++ +F M + + + T+VS+L +C LEMG+ +H ++++ + ++K
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+LV+MY KCG +D +F RD++ W MI+G GD E ALEL M+ +GV
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 395 PNDITFIGALKACSHSGLLQEGKRL 419
PN +T + C + + +GK L
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCL 341
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 327/580 (56%), Gaps = 15/580 (2%)
Query: 100 HVFAELVDLKLGKA----------LHGYVMRNRNCGQSGVPL-STSLIDMYVKCKNLAYA 148
H + ++ DL L A LHGYV+++ G S +PL + +LI+ Y K + +
Sbjct: 13 HNYNQICDLLLSSARTRSTIKGLQLHGYVVKS---GLSLIPLVANNLINFYSKSQLPFDS 69
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
R F+ S +W+++I+ + + KM + P++ + S K C +
Sbjct: 70 RRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAIL 129
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
+ G+ +H +++ G V + ++ +DMY KCG+ AR +FD + ++++ S M+
Sbjct: 130 SRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMM 189
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
YAQ +E +F + + N+ + S++ +CA + LE+G+ IH K
Sbjct: 190 YGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFD 249
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+ + +SLV +Y+KCG + Y++F +++ +WN M+ A + +ELF M
Sbjct: 250 SSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
+ G+ PN ITF+ L ACSH+GL+ EG+ F +M + + P +HY +VD+L RAG
Sbjct: 310 KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGR 368
Query: 449 LDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI 508
L EA ++I +MP+ P V G+LL +C +HKN +L +AA + L G ++ +SN
Sbjct: 369 LQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNA 428
Query: 509 YAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEM 568
YAA+ ++ D + R+ +RD G KE G+S +E VH F G+R H +++ IYE +AE+
Sbjct: 429 YAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Query: 569 REKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVC 628
E+++ GY D S VL +DG+EK + YHSE+LA+A+GLI+ PIR++KNLRVC
Sbjct: 489 GEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVC 548
Query: 629 DDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
D HNA +S R IIVRD NRFH F++G CSC+DYW
Sbjct: 549 GDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 119/231 (51%), Gaps = 2/231 (0%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G+ DVFV ++++ MY + G + +AR++FD+M ++ V+WS M+ Y + G +EAL
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L ++ + ++ + S+I V A L+LG+ +HG + ++ S + +SL+ +
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG--LSIKSSFDSSSFVGSSLVSL 261
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC A VF+ ++ W M+ Y ++ + I LF +M+ G+ PN IT
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
L+++ C ++ G+ + I + + +DM G+ G + A
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEA 372
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 324/599 (54%), Gaps = 43/599 (7%)
Query: 108 LKLGKALHGYVMR---NRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWT 164
L KALH ++++ + C PL+ +L+++Y KC ++A VFD ++W
Sbjct: 19 LTTAKALHAHIVKLGIVQCC-----PLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 165 TMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGKLLHAFTLR 223
+++ N + + +F + + P++ +LVK C + +++ G+ +H +
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
+ V+ ++ +DMY KCG SA+ VFDSI K+ + +AM+S YA++ +E ++
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 284 F------------------VQMND--------CGIRPNEITMVSLLVL------CAKAGS 311
F VQ +R + ++ LVL CA +
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
G+ +H + G + +L+DMYAKC D+ +F+ RD++ W +I G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
A G E AL L+ +M + GV PN++TF+G + ACSH G +++G+ LF M D+G+ P
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
++HY C++DLL R+GLLDEA+ LI MP P+ +LL+ACK ++G A
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 492 L-SLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIM 550
+ S + +L+SNIYA+ + WG VS+ RR + + + K+PG SS+EV F
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493
Query: 551 GDREHPETRRIYEIVAEMREKLD-NVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYG 609
G+ HP I+ ++ ++ E++ GY PD S +L ++D +EKE L +HSE+ A+AYG
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553
Query: 610 LISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
L+ PG PIRIVKNLRVC D H +S I REIIVRD R+HHFK G CSC+D+W
Sbjct: 554 LLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 190/409 (46%), Gaps = 37/409 (9%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR 87
+ N ++ +YG+ G+ A Q+FD+M +D ++W++++ + L + L + + +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 88 -VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
++P + +++ A L + G+ +H + + + V +SL+DMY KC L
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV--KSSLVDMYAKCGLLN 157
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF----------------------- 183
A++VFD + +SWT M++GY + E + LF
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 184 --------VKMRREGV-IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+MRRE V I + + + S+V C + A G+ +H + G V ++
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
A IDMY KC D +A+ +F + ++D++ +++I AQ ++ ++ M G++P
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP 337
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
NE+T V L+ C+ G +E G+ + + K GI+ + T L+D+ + G +D L
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 354 FAAAT-DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFI 401
D W ++S C G G+ + + + + + + T+I
Sbjct: 398 IHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 148/355 (41%), Gaps = 71/355 (20%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
+ D V ++++ MY + G L A+ +FD + K+ +SW+ M+ Y ++G +EAL+L R
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 82 -------------------------------DMRVARVKP-SEIAMISIIHVFAELVDLK 109
+MR RV + + SI+ A L
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 110 LGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIA 168
G+ +HG V+ G S V +S +LIDMY KC ++ A+ +F +VSWT++I
Sbjct: 256 AGRQVHGLVI---ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 169 GYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK-LLHAFTLRNGIT 227
G + + L+ M GV PNE+T + L+ C V +E G+ L + T GI
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM 287
S+ T +D+ G+ G + D EN +
Sbjct: 373 PSLQHYTCLLDLLGRSG-------LLDEAEN---------------------------LI 398
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+ P+E T +LL C + G +MG I ++ +D L ++YA
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYA 453
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+IP+ + L L C L K LHA ++ GI LA +++YGKCG A
Sbjct: 2 LIPHYLHQLQL---CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVF-DIFVQMNDCGIRPNEITMVSLLVLCAKA 309
VFD + ++D + +++++A Q N + + G+RP++ +L+ CA
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
GS++ G+ +H + D +K+SLVDMYAKCG +++ +F + ++ + W M+
Sbjct: 119 GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMV 178
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
SG A G E ALELF + + N ++ + SG +Q GK L
Sbjct: 179 SGYAKSGRKEEALELFRILP----VKNLYSWTALI-----SGFVQSGKGL 219
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
L LCA+ +L K +H++I K GI + L +LV++Y KCG ++F RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 363 LMWNVMISGCAMLG-DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF- 420
+ W +++ G+ + G+ P+D F +KAC++ G + G+++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
H +V ++ V+ +VD+ ++ GLL+ A+
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAK 160
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF VF+ NA+I MY + + A+ +F +M +D VSW+++I ++G ++AL L
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQS 127
DM VKP+E+ + +I+ + + G+V + R QS
Sbjct: 328 DDMVSHGVKPNEVTFVGLIYACSHV----------GFVEKGRELFQS 364
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 336/653 (51%), Gaps = 13/653 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
+VF N I+ Y + + ARQLFD++ D VS++T+I Y A+ L + MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+ + +I + VDL K LH + + S V + + + Y K
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSV--NNAFVTYYSKGGL 188
Query: 145 LAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
L A SVF G VSW +MI Y + + L+ +M +G + T+ S++
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD---FRSARYVFDSIENKD 260
+++ L G+ H ++ G + + + ID Y KCG + VF I + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 261 LMICSAMISAYAQTNCI-DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
L++ + MIS Y+ + +E F QM G RP++ + V + C+ S K IH
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 320 SYIDKQGIKRD-TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
K I + + +L+ +Y K G++ +F + + + +N MI G A G G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
AL L+ M G+ PN ITF+ L AC+H G + EG+ F+ M F + P+ EHY C
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
M+DLL RAG L+EA++ I MP +P +V +LL AC+ HKN+ L E AA + + ++
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
V+++N+YA KW +++ +R++MR I K+PG S IEV H F+ D HP
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 559 RRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETA---LNYHSEKLAMAYGLISVAP 615
R + E + EM +K+ VGY D ++ D + L +HSEKLA+A+GL+S
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRD 668
Query: 616 GAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
G + +VKNLR+C D HNA +S + GREIIVRD RFH FK+G CSC DYW
Sbjct: 669 GEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 304/586 (51%), Gaps = 48/586 (8%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G + +A +LF K+ + D V W+ MI+ + + E + L +M V P
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDS------- 134
Query: 100 HVFAELVD--------LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSV 151
H F L++ L GK LH +V++ G S + + +L+ MY C + AR V
Sbjct: 135 HTFPFLLNGLKRDGGALACGKKLHCHVVK-FGLG-SNLYVQNALVKMYSLCGLMDMARGV 192
Query: 152 FDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEAL 211
FD + SW MI+GY E I L V+M R V P +T+L ++ C V+
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 212 EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD-------FRS---------------- 248
+ K +H + S+ L A ++ Y CG+ FRS
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 249 --------ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMV 300
AR FD + +D + + MI Y + C +E +IF +M G+ P+E TMV
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 301 SLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR 360
S+L CA GSLE+G+WI +YIDK IK D + +L+DMY KCG + ++F R
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
D W M+ G A G G+ A+++F +M+ + P+DIT++G L AC+HSG++ + ++ F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
KM D + P + HYGCMVD+L RAGL+ EA +++ MPM PN++V G+LL A +LH +
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 481 VKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
+ E AA + L LE L+ NIYA +W D+ ++RR + D I K PG S IE
Sbjct: 553 EPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Query: 541 VNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLM 586
VNG HEF+ GD+ H ++ IY + E+ ++ Y PD S +L
Sbjct: 613 VNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLF 658
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 196/400 (49%), Gaps = 42/400 (10%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +++V NA++ MY G ++ AR +FD+ +D SW+ MI Y R +E+++LL
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV--------MRNRN--------C 124
+M V P+ + ++ ++ +++ D L K +H YV +R N C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 125 GQSGVPLS-------------TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
G+ + + TS++ YV+ NL AR+ FD +SWT MI GY+
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
NE + +F +M+ G+IP+E T++S++ C + +LE G+ + + +N I VV
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
+ A IDMY KCG A+ VF ++ +D +AM+ A E +F QM D
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL------VDMYAKCG 345
I+P++IT + +L C +G ++ + + ++ D +++ SL VDM + G
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFA-----KMRSDHRIEPSLVHYGCMVDMLGRAG 519
Query: 346 DIDTTYRLF-AAATDRDILMWNVMISGCAMLGDGEAALEL 384
+ Y + + + ++W ++ G + L + E EL
Sbjct: 520 LVKEAYEILRKMPMNPNSIVWGALL-GASRLHNDEPMAEL 558
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/750 (29%), Positives = 358/750 (47%), Gaps = 105/750 (14%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD------ 74
GF + N +I +Y + L +ARQLFD++ + D ++ +TM+ Y +G +
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVF 103
Query: 75 ---------------------------EALDLLRDMRVARVKPSEIAMISIIHVFAELVD 107
A++L M+ KP S++ A + D
Sbjct: 104 EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD 163
Query: 108 -LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN----LAYARSVFDGFSGASIVS 162
K H +++ + V S +L+ +Y KC + L AR VFD S
Sbjct: 164 DEKQCVQFHAAALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDEILEKDERS 221
Query: 163 WTTM--------------------------------IAGYIHTNNLNEGIRLFVKMRREG 190
WTTM I+GY++ E + + +M G
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG 281
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ +E T S+++ C T L+ GK +HA+ LR S + + +Y KCG F AR
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEAR 340
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND--------------------- 289
+F+ + KDL+ +A++S Y + I E IF +M +
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 290 ------C----GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
C G P + + CA G+ G+ H+ + K G +L+
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 340 MYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
MYAKCG ++ ++F D + WN +I+ G G A++++ EM +G+ P+ IT
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+ L ACSH+GL+ +G++ F M + + P +HY ++DLL R+G +A+ +I +
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVS 519
P +P + +LL+ C++H N++LG AA + L G +L+SN++AA +W +V+
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 520 DIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTP 579
+R+ MRD G+ KE S IE+ VH F++ D HPE +Y + ++ +++ +GY P
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700
Query: 580 DISAVLMNIDGE-EKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLL 638
D S VL +++ + KE L HSEK+A+A+GL+ + PG IRI KNLR C D HN L
Sbjct: 701 DTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFL 760
Query: 639 SRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
S + R+II+RDR RFHHF+ G CSC ++W
Sbjct: 761 SWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 320/558 (57%), Gaps = 6/558 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G D + N +I Y + G + A +LF+ M +K+ +SW+T++ Y +N L EA++L
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M +KP A SI+ A L L G +H Y ++ N G ++ SLIDMY
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK-ANLGNDSY-VTNSLIDMYA 396
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN---LNEGIRLFVKMRREGVIPNEIT 197
KC L AR VFD F+ A +V + MI GY L+E + +F MR + P+ +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+SL++ ++ +L K +H + G+ + + +A ID+Y C + +R VFD ++
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
KDL+I ++M + Y Q + +E ++F+++ RP+E T +++ S+++G+
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
H + K+G++ + + +L+DMYAKCG + ++ F +A RD++ WN +IS A G+
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
G+ AL++ +M ++G+ PN ITF+G L ACSH+GL+++G + F M+ FG+ P+ EHY
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYV 695
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
CMV LL RAG L++A++LI MP +P +V SLL+ C NV+L E AA + +
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
G ++SNIYA++ W + +R M+ G+ KEPG S I +N VH F+ D+ H +
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCK 815
Query: 558 TRRIYEIVAEMREKLDNV 575
+IYE++ ++ ++ V
Sbjct: 816 ANQIYEVLDDLLVQIRGV 833
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 14/446 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++GF RDV+V +I Y + G++++AR +FD + +K V+W+TMI + G
Sbjct: 173 FLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 232
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS- 134
+L L + V P + +++ + L L+ GK +H +++R G+ + S
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR------YGLEMDASL 286
Query: 135 ---LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV 191
LID YVKC + A +F+G +I+SWTT+++GY E + LF M + G+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 192 IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
P+ S++ C ++ AL FG +HA+T++ + + + IDMY KC AR
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 252 VFDSIENKDLMICSAMISAYAQTNC---IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
VFD D+++ +AMI Y++ + E +IF M IRP+ +T VSLL A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
SL + K IH + K G+ D ++L+D+Y+ C + + +F +D+++WN M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
+G + E AL LF+E++ P++ TF + A + +Q G+ FH + G
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRG 585
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQK 454
L ++D+ ++ G ++A K
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHK 611
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 236/461 (51%), Gaps = 12/461 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G D ++ N +I +Y G + +AR++F+KM +++ VSWSTM+ +G+ +E+L +
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 81 RDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ R + P+E + S I + L ++ V + T LID Y
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+K N+ YAR VFD S V+WTTMI+G + ++LF ++ + V+P+ +
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+++ C + LE GK +HA LR G+ + L ID Y KCG +A +F+ + NK
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+++ + ++S Y Q E ++F M+ G++P+ S+L CA +L G +H
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKC---GDIDTTYRLFAAATDRDILMWNVMISGCAMLG 376
+Y K + D+ + SL+DMYAKC D + +FAAA D++++N MI G + LG
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA---DVVLFNAMIEGYSRLG 430
Query: 377 ---DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
+ AL +F +M + + P+ +TF+ L+A + L K++ H ++ +GL +
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI-HGLMFKYGLNLDI 489
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
++D+ S L ++ +L+ D + V+ S+ A
Sbjct: 490 FAGSALIDVYSNCYCLKDS-RLVFDEMKVKDLVIWNSMFAG 529
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 12/277 (4%)
Query: 211 LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISA 270
L + ++H + G+ + L+ I++Y + G AR VF+ + ++L+ S M+SA
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 271 YAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKW----IHSYIDKQ 325
+E +F++ PNE + S + C +G G+W + S++ K
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKS 177
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
G RD + T L+D Y K G+ID +F A ++ + W MISGC +G +L+LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSR 445
++ V+P+ L ACS L+ GK++ H + +GL ++D +
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVK 296
Query: 446 AGLLDEAQKLIIDMPMRPNNVVLGSLLAACK---LHK 479
G + A KL MP + N + +LL+ K LHK
Sbjct: 297 CGRVIAAHKLFNGMPNK-NIISWTTLLSGYKQNALHK 332
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 13 GARFCCE---NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGR 69
G F C+ G + ++ NA++ MY + GS E A + FD +D V W+++I +Y
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 70 NGLLDEALDLLRDMRVARVKPSEIAMISII 99
+G +AL +L M ++P+ I + ++
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVL 663
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
LL L A L +H I G++ DT L L+++Y++ G + ++F +R+
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
++ W+ M+S C G E +L +F+E + PN+ ++AC SGL G+ +
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMV 167
Query: 421 HKM---VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKL 477
++ + G V ++D + G +D A +L+ D + V ++++ C
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA-RLVFDALPEKSTVTWTTMISGC-- 224
Query: 478 HKNVKLG 484
VK+G
Sbjct: 225 ---VKMG 228
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 314/560 (56%), Gaps = 9/560 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D++V +++I MY + G + A ++FD++ D V+WS+M+ + +NG +A++ R M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 85 VAR-VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
+A V P + +I+++ +L + +LG+ +HG+V+R + + L SL++ Y K +
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR--GFSNDLSLVNSLLNCYAKSR 212
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
A ++F + ++SW+T+IA Y+ E + +F M +G PN T+L +++
Sbjct: 213 AFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQ 272
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C LE G+ H +R G+ V ++TA +DMY KC A VF I KD++
Sbjct: 273 ACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 332
Query: 264 CSAMISAYAQTNCIDEVFDIF-VQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
A+IS + + F + + + RP+ I MV +L C++ G LE K HSY+
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
K G + + SLV++Y++CG + ++F +D ++W +I+G + G G AL
Sbjct: 393 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 452
Query: 383 ELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
E F M ++ V PN++TF+ L ACSH+GL+ EG R+F MV+D+ L P +EHY +VD
Sbjct: 453 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVD 512
Query: 442 LLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY 501
LL R G LD A ++ MP P +LG+LL AC++H+N ++ E A + LES+ GY
Sbjct: 513 LLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGY 572
Query: 502 NVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRI 561
+LMSN+Y + +W +V +R +++ GI K S IE+ VH F+ D HPE +
Sbjct: 573 YMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPV 632
Query: 562 YEIVAE----MREKLDNVGY 577
Y ++ E M+E L+N Y
Sbjct: 633 YGLLKELDLHMKEDLENCVY 652
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 216/436 (49%), Gaps = 5/436 (1%)
Query: 45 ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAE 104
ARQ+F +M + W+T++++ R +E L M KP + + E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 105 LVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWT 164
L ++ G+ +HG+V ++ G S + + +SLI MY+KC + A +FD IV+W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLG-SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 165 TMIAGYIHTNNLNEGIRLFVKM-RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
+M++G+ + + + F +M V P+ +T+++LV C + G+ +H F +R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
G + + L + ++ Y K F+ A +F I KD++ S +I+ Y Q E +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
F M D G PN T++ +L CA A LE G+ H ++G++ + K+ T+LVDMY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 344 CGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF-VEMEAQGVIPNDITFIG 402
C + Y +F+ +D++ W +ISG + G ++E F + + P+ I +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L +CS G L++ K FH V +G +V+L SR G L A K+ + ++
Sbjct: 372 VLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 463 PNNVVLGSLLAACKLH 478
+ VV SL+ +H
Sbjct: 431 -DTVVWTSLITGYGIH 445
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 184/373 (49%), Gaps = 12/373 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F GF D+ + N+++ Y + + + A LF + +KD +SWST+I Y +NG E
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL + DM +P+ ++ ++ A DL+ G+ H +R ++ V +ST+L
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL--ETEVKVSTAL 305
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIPN 194
+DMY+KC + A +VF +VSW +I+G+ + I F M E P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
I ++ ++ C + LE K H++ ++ G + + + +++Y +CG +A VF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLE 313
I KD ++ +++I+ Y + + F M ++PNE+T +S+L C+ AG +
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 314 MGKWIHSY-IDKQGIKRDTKLKTSLVDMYAKCGDIDT----TYRLFAAATDRDILMWNVM 368
G I ++ + + + LVD+ + GD+DT T R+ + T + + +
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ---ILGTL 542
Query: 369 ISGCAMLGDGEAA 381
+ C + +GE A
Sbjct: 543 LGACRIHQNGEMA 555
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D V ++ MY + G ++ A ++F+ + ++ V W++MI Y +N L +E L L MR
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TSLIDMYV 140
V +E ++I +L L GK HG +++ SG+ LS TSL+DMYV
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK------SGIELSSCLVTSLLDMYV 288
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC +++ AR VF+ S +V WT MI GY H ++NE + LF KM+ + PN +TI S
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ CG +E LE G+ +H +++ GI + V A A + MY KC R A+YVF+ KD
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
++ +++IS ++Q I E +F +MN + PN +T+ SL CA GSL +G +H+
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 321 YIDKQGI--KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
Y K G + T+L+D YAKCGD + +F +++ + W+ MI G GD
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+LELF EM + PN+ TF L AC H+G++ EGK+ F M D+ P +HY C
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MVD+L+RAG L++A +I MP++P+ G+ L C +H LGE + L L
Sbjct: 588 MVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDD 647
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
Y VL+SN+YA++ +W ++R M+ G+SK G S++E
Sbjct: 648 ASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 227/461 (49%), Gaps = 16/461 (3%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NG D+ + ++ +YG G + AR +FD++ + D W M+R Y N E + L
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-----LSTS 134
+ + +I + EL DL GK +H C VP + T
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH--------CQLVKVPSFDNVVLTG 181
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+DMY KC + A VF+ + ++V WT+MIAGY+ + EG+ LF +MR V+ N
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
E T +L+ C + AL GK H +++GI +S L T+ +DMY KCGD +AR VF+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ DL++ +AMI Y ++E +F +M I+PN +T+ S+L C +LE+
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G+ +H K GI DT + +LV MYAKC +F +++DI+ WN +ISG +
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G AL LF M ++ V PN +T AC+ G L G L V L
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 435 HYG-CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
H G ++D ++ G ++ +LI D N + +++
Sbjct: 481 HVGTALLDFYAKCG-DPQSARLIFDTIEEKNTITWSAMIGG 520
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 200/381 (52%), Gaps = 10/381 (2%)
Query: 1 MLSHTFISARTRGARF---CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDA 57
+++ T +SA +G F ++G + +++ MY + G + AR++F++ D
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 58 VSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGY 117
V W+ MI Y NG ++EAL L + M+ +KP+ + + S++ + +L+LG+++HG
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 118 VMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN 177
++ G ++ +L+ MY KC A+ VF+ S IV+W ++I+G+ +++
Sbjct: 369 SIK---VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 425
Query: 178 EGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI--TISVVLATA 235
E + LF +M E V PN +T+ SL C ++ +L G LHA++++ G + SV + TA
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
+D Y KCGD +SAR +FD+IE K+ + SAMI Y + ++F +M +PN
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 296 EITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
E T S+L C G + G K+ S TK T +VDM A+ G+++ +
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 355 AA-ATDRDILMWNVMISGCAM 374
D+ + + GC M
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGM 626
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 168/388 (43%), Gaps = 52/388 (13%)
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
L+ +C +++L + H NG+ + +AT + +YG G + AR VFD I D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ M+ Y EV ++ + G R ++I L C + L+ GK IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ K D + T L+DMYAKCG+I + +++F T R+++ W MI+G E
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
L LF M V+ N+ T+ + AC+ L +GK FH + G +E C+V
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK-WFHGCLVKSG----IELSSCLV 280
Query: 441 ----DLLSRAGLLDEAQKLI-----IDMPM-----------------------------R 462
D+ + G + A+++ +D+ M +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 463 PNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNV--LMSNIYAAENKWGDVSD 520
PN V + S+L+ C L +N++LG G LS++ NV + ++YA + D
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHG--LSIKVGIWDTNVANALVHMYAKCYQNRDAKY 398
Query: 521 IRRAMRDAGI-SKEPGVSSIEVNGSVHE 547
+ + I + +S NGS+HE
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHE 426
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 46/263 (17%)
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
+L +K +++ + H + G+ D + T LV +Y G +F + D
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+W VM+ + + ++L+ + G +DI F ALKAC+ L GK++ +
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 423 MVHDFGLVPKVEH--YGCMVDLLSRAGLLDEAQKLIIDMP-------------------- 460
+V VP ++ ++D+ ++ G + A K+ D+
Sbjct: 168 LVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 461 ---------MRPNNVV-----LGSLLAACKLHKNVKLGEWAAGQFLS--LESHKCGYNVL 504
MR NNV+ G+L+ AC + G+W G + +E C L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC----L 279
Query: 505 MSNIYAAENKWGDVSDIRRAMRD 527
++++ K GD+S+ RR +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNE 302
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 305/580 (52%), Gaps = 38/580 (6%)
Query: 20 NGFHRDVFVCNAIIMM--YGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
NG D F + +I E L+++ ++ + + + SW+ IR + + E+
Sbjct: 79 NGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESF 138
Query: 78 DLLRDMR---VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
L + M +P + V A+L LG + G+V++ R S V +
Sbjct: 139 LLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV--HNA 196
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
I M+ C ++ AR VFD +VSW +I GY + I ++ M EGV P+
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
++T++ LV C + L GK + + NG+ +++ L A +DM+ KCGD AR +FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 255 SIENKDLMICSAMISAYAQTNCID---EVFD----------------------------I 283
++E + ++ + MIS YA+ +D ++FD +
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
F +M +P+EITM+ L C++ G+L++G WIH YI+K + + L TSLVDMYAK
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 344 CGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGA 403
CG+I +F R+ L + +I G A+ GD A+ F EM G+ P++ITFIG
Sbjct: 437 CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 404 LKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP 463
L AC H G++Q G+ F +M F L P+++HY MVDLL RAGLL+EA +L+ MPM
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 464 NNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRR 523
+ V G+LL C++H NV+LGE AA + L L+ G VL+ +Y N W D RR
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 524 AMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYE 563
M + G+ K PG SSIEVNG V EFI+ D+ PE+ +IY+
Sbjct: 617 MMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 34/270 (12%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD---- 74
ENG + + NA++ M+ + G + AR++FD + + VSW+TMI Y R GLLD
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 75 ---------------------------EALDLLRDMRVARVKPSEIAMISIIHVFAELVD 107
+AL L ++M+ + KP EI MI + ++L
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMI 167
L +G +H Y+ + V L TSL+DMY KC N++ A SVF G + +++T +I
Sbjct: 405 LDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 168 AGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK-LLHAFTLRNGI 226
G + + I F +M G+ P+EIT + L+ C ++ G+ R +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSI 256
+ + +D+ G+ G A + +S+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 139/271 (51%), Gaps = 11/271 (4%)
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY---VFD 254
+LSL+++C + L K + A + NG+ + ++ I + + R Y +
Sbjct: 56 LLSLLEKCKLLLHL---KQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSVKILK 111
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQM---NDCGIRPNEITMVSLLVLCAKAGS 311
IEN ++ + I ++++ E F ++ QM C RP+ T L +CA
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
+G I ++ K ++ + + + + M+A CGD++ ++F + RD++ WN +I+G
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
+G+ E A+ ++ ME++GV P+D+T IG + +CS G L GK F++ V + GL
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE-FYEYVKENGLRM 290
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
+ ++D+ S+ G + EA+++ ++ R
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/433 (42%), Positives = 259/433 (59%), Gaps = 4/433 (0%)
Query: 237 IDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPN 295
I+ K G+ A+ V + +++++ + MI Y + +E M + I+PN
Sbjct: 105 IESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPN 164
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
+ + S L CA+ G L KW+HS + GI+ + L ++LVD+YAKCGDI T+ +F
Sbjct: 165 KFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFY 224
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQE 415
+ D+ +WN MI+G A G A+ +F EMEA+ V P+ ITF+G L CSH GLL+E
Sbjct: 225 SVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEE 284
Query: 416 GKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC 475
GK F M F + PK+EHYG MVDLL RAG + EA +LI MP+ P+ V+ SLL++
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSS 344
Query: 476 KLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPG 535
+ +KN +LGE A +L K G VL+SNIY++ KW +R M GI K G
Sbjct: 345 RTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKG 401
Query: 536 VSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKET 595
S +E G +H F GD H ET+ IY+++ + +K + G+ D VLM++ EEKE
Sbjct: 402 KSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEE 461
Query: 596 ALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFH 655
LNYHSEKLA+AY ++ +PG IRI KN+R+C D HN +S++ R II+RDR RFH
Sbjct: 462 NLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFH 521
Query: 656 HFKEGSCSCHDYW 668
F++G CSC DYW
Sbjct: 522 RFEDGLCSCRDYW 534
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIP 193
+I+ +K A+ V S ++++W MI GY+ E ++ M + P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
N+ + S + C + L K +H+ + +GI ++ +L++A +D+Y KCGD ++R VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
S++ D+ I +AMI+ +A E +F +M + P+ IT + LL C+ G LE
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 314 MGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISG 371
GK + ++ I+ + ++VD+ + G + Y L + + D+++W ++S
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 372 CAMLGDGE 379
+ E
Sbjct: 344 SRTYKNPE 351
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 19/311 (6%)
Query: 28 VCNA--IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM-R 84
VCN II ++G A+++ D++ ++W+ MI Y RN +EAL L++M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL----STSLIDMYV 140
+KP++ + S + A L DL K +H ++ SG+ L S++L+D+Y
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMI------DSGIELNAILSSALVDVYA 211
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC ++ +R VF + W MI G+ E IR+F +M E V P+ IT L
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 201 LVKECGTVEALEFGK-LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-N 258
L+ C LE GK + R I + A +D+ G+ G + A + +S+
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
D++I +++S+ ++T E+ +I +Q N + + ++S + K E + +
Sbjct: 332 PDVVIWRSLLSS-SRTYKNPELGEIAIQ-NLSKAKSGDYVLLSNIYSSTK--KWESAQKV 387
Query: 319 HSYIDKQGIKR 329
+ K+GI++
Sbjct: 388 RELMSKEGIRK 398
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 304/557 (54%), Gaps = 13/557 (2%)
Query: 17 CCE--------NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYG 68
CCE + F DVFV A + M+ + S+++A ++F++M ++DA +W+ M+ +
Sbjct: 70 CCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 69 RNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG 128
++G D+A L R+MR+ + P + ++++I + LKL +A+H +R Q
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ-- 187
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGA--SIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
V ++ + I Y KC +L A+ VF+ ++VSW +M Y + L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 187 RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
RE P+ T ++L C E L G+L+H+ + G + FI MY K D
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
SAR +FD + ++ + + MIS YA+ +DE +F M G +P+ +T++SL+ C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLK-TSLVDMYAKCGDIDTTYRLFAAATDRDILMW 365
K GSLE GKWI + D G KRD + +L+DMY+KCG I +F ++ ++ W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 366 NVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
MI+G A+ G AL+LF +M PN ITF+ L+AC+HSG L++G FH M
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 426 DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGE 485
+ + P ++HY CMVDLL R G L+EA +LI +M +P+ + G+LL ACK+H+NVK+ E
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 486 WAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSV 545
AA +LE V M+NIYAA W + IR M+ I K PG S I+VNG
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 546 HEFIMGDREHPETRRIY 562
H F +G+ H E IY
Sbjct: 608 HSFTVGEHGHVENEVIY 624
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 165/365 (45%), Gaps = 37/365 (10%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+S+ +W I ++ N+ E + LF +M+R G PN T + K C + + +++
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCI 277
HA +++ V + TA +DM+ KC A VF+ + +D +AM+S + Q+
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 278 DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
D+ F +F +M I P+ +T+++L+ + SL++ + +H+ + G+ + +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 338 VDMYAKCGDIDTTYRLFAAAT--DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
+ Y KCGD+D+ +F A DR ++ WN M ++ G+ A L+ M + P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 396 NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRA--------- 446
+ TFI +C + L +G RL H G +E + + S++
Sbjct: 255 DLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 447 ----------------------GLLDEAQKL---IIDMPMRPNNVVLGSLLAACKLHKNV 481
G +DEA L +I +P+ V L SL++ C ++
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 482 KLGEW 486
+ G+W
Sbjct: 374 ETGKW 378
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 312/573 (54%), Gaps = 16/573 (2%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL--R 81
RD+F+ + +AR+L ++ W ++I ++ L+ L L R
Sbjct: 34 RDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYR 93
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTSLIDMYV 140
MR V PS ++ +L D + H ++++ G P + SLI Y
Sbjct: 94 HMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVK---FGLDSDPFVRNSLISGYS 149
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+A +FDG +V+WT MI G++ + +E + FV+M++ GV NE+T++S
Sbjct: 150 SSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 201 LVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
++K G VE + FG+ +H L G + V + ++ +DMYGKC + A+ VFD + ++
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+++ +A+I+ Y Q+ C D+ +F +M + PNE T+ S+L CA G+L G+ +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
Y+ K I+ +T T+L+D+Y KCG ++ +F ++++ W MI+G A G
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
A +LF M + V PN++TF+ L AC+H GL++EG+RLF M F + PK +HY CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKC 499
VDL R GLL+EA+ LI MPM P NVV G+L +C LHK+ +LG++AA + + L+
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 500 GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHP-ET 558
G L++N+Y+ W +V+ +R+ M+D + K PG S IEV G + EFI D + P E+
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 559 RRIYEIVAEMREKLDNVGYTPDISAVLMNIDGE 591
+Y+ LD VG + L ++ E
Sbjct: 570 DDLYKT-------LDTVGVQMRLPDELEDVTAE 595
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 190/361 (52%), Gaps = 3/361 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G D FV N++I Y G +FA +LFD DKD V+W+ MI + RNG EA+
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+M+ V +E+ ++S++ ++ D++ G+++HG + + V + +SL+DMY
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV-KCDVFIGSSLVDMYG 251
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC A+ VFD ++V+WT +IAGY+ + ++G+ +F +M + V PNE T+ S
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C V AL G+ +H + ++N I I+ T ID+Y KCG A VF+ + K+
Sbjct: 312 VLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH- 319
+ +AMI+ +A + FD+F M + PNE+T +++L CA G +E G+ +
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFL 431
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-AATDRDILMWNVMISGCAMLGDG 378
S + ++ +VD++ + G ++ L + ++W + C + D
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
Query: 379 E 379
E
Sbjct: 492 E 492
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 318/578 (55%), Gaps = 11/578 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL----L 80
D++V +++ MY + G +E ++F M +++ +WSTM+ Y G ++EA+ + L
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R+ S+ +++ A + + LG+ +H ++N G V LS +L+ MY
Sbjct: 212 REKEEG--SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF--VALSNALVTMYS 267
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC++L A +FD + ++W+ M+ GY E ++LF +M G+ P+E TI+
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C + LE GK LH+F L+ G + TA +DMY K G AR FD ++ +D
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + +++IS Y Q + +E ++ +M GI PN+ TM S+L C+ +LE+GK +H
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ K G + + ++L MY+KCG ++ +F ++D++ WN MISG + G G+
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
ALELF EM A+G+ P+D+TF+ + ACSH G ++ G F+ M GL PKV+HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
DLLSRAG L EA++ I + + LL+ACK H +LG +A + ++L S +
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
V +S IY A + DV + + MR G+SKE G S IE+ H F++GD HP
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Query: 561 IYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALN 598
++V + ++ G+ + + + EE+ T L+
Sbjct: 688 TKDLVCLVSRQMIEEGFVTVLDSSFVE---EEEGTQLS 722
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 200/365 (54%), Gaps = 8/365 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG V + NA++ MY + SL A ++FD D+++++WS M+ Y +NG EA+
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLID 137
L M A +KPSE ++ +++ +++ L+ GK LH ++++ G + + +T+L+D
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---LGFERHLFATTALVD 365
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
MY K LA AR FD + WT++I+GY+ ++ E + L+ +M+ G+IPN+ T
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ S++K C ++ LE GK +H T+++G + V + +A MY KCG VF
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
NKD++ +AMIS + DE ++F +M G+ P+++T V+++ C+ G +E G W
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-W 544
Query: 318 IHSYIDKQGIKRDTKLK--TSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAM 374
+ + I D K+ +VD+ ++ G + +A D + +W +++S C
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 375 LGDGE 379
G E
Sbjct: 605 HGKCE 609
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 249/544 (45%), Gaps = 64/544 (11%)
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+ P ++ + ++ +L G+A+HG ++R + + + L++ Y KC L
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKL 65
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG---IRLFVKMRREGVIPNEITILSLV 202
A A S+F+ +VSW ++I GY ++ ++LF +MR + ++PN T+ +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
K ++++ G+ HA ++ + + T+ + MY K G VF + ++
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 263 ICSAMISAYAQTNCIDE---VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
S M+S YA ++E VF++F++ + G ++ ++L A + +G+ IH
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
K G+ L +LV MY+KC ++ ++F ++ DR+ + W+ M++G + G+
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
A++LF M + G+ P++ T +G L ACS L+EGK+L H + G + +
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATTAL 363
Query: 440 VDLLSRAGLLDEAQK-----------------------------LIIDMPMR-----PNN 465
VD+ ++AG L +A+K LI+ M+ PN+
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNV-LMSNIYAAENKWGDVSD---- 520
+ S+L AC ++LG+ G + H G V + S + +K G + D
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTI---KHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 521 IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIY-EIVAEMREKLDNVGYTP 579
RR +S +S + NG GD E ++ E++AE E D+V +
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQ------GD----EALELFEEMLAEGMEP-DDVTFVN 529
Query: 580 DISA 583
ISA
Sbjct: 530 IISA 533
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F + GF R +F A++ MY + G L AR+ FD + ++D W+++I Y +N +E
Sbjct: 347 FLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEE 406
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL L R M+ A + P++ M S++ + L L+LGK +HG+ +++ + VP+ ++L
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE--VPIGSAL 464
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
MY KC +L VF +VSW MI+G H +E + LF +M EG+ P++
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 196 ITILSLVKECGTVEALEFGKL-LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+T ++++ C +E G + + + G+ V +D+ + G + A+ +
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 255 SIENKDLMIC 264
S N D +C
Sbjct: 585 S-ANIDHGLC 593
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 315/549 (57%), Gaps = 3/549 (0%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
+++VCNA+I MY G + A ++ +M + D V+W+++I+ Y +N + EAL+ DM
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
A K E++M SII L +L G LH YV+++ S + + +LIDMY KC
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG--WDSNLQVGNTLIDMYSKCNL 436
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
Y F ++SWTT+IAGY + E + LF + ++ + +E+ + S+++
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
++++ K +H LR G+ + V+ +D+YGKC + A VF+SI+ KD++
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
++MIS+ A E ++F +M + G+ + + ++ +L A +L G+ IH Y+ +
Sbjct: 556 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 615
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
+G + + ++VDMYA CGD+ + +F + +L + MI+ M G G+AA+EL
Sbjct: 616 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F +M + V P+ I+F+ L ACSH+GLL EG+ M H++ L P EHY C+VD+L
Sbjct: 676 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
RA + EA + + M P V +LLAAC+ H ++GE AA + L LE G VL
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 505 MSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEI 564
+SN++A + +W DV +R M+ +G+ K PG S IE++G VH+F D+ HPE++ IYE
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 855
Query: 565 VAEMREKLD 573
++E+ KL+
Sbjct: 856 LSEVTRKLE 864
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 223/441 (50%), Gaps = 9/441 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDL 79
G+H F+ NA++ MY + L AR+LFD +K DAV W++++ +Y +G E L+L
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLEL 271
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
R+M + P+ ++S + KLGK +H V+++ + S + + +LI MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS-STHSSELYVCNALIAMY 330
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+C + A + + A +V+W ++I GY+ E + F M G +E+++
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
S++ G + L G LHA+ +++G ++ + IDMY KC F + +K
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
DL+ + +I+ YAQ +C E ++F + + +E+ + S+L + S+ + K IH
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+I ++G+ DT ++ LVD+Y KC ++ R+F + +D++ W MIS A+ G+
Sbjct: 511 CHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD-FGL-----VPKV 433
A+ELF M G+ + + + L A + L +G+ + ++ F L V V
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 434 EHYGCMVDLLSRAGLLDEAQK 454
+ Y C DL S + D ++
Sbjct: 630 DMYACCGDLQSAKAVFDRIER 650
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 4/384 (1%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA 86
F+ ++ MYG+ GSL+ A ++FD+M D+ A +W+TMI Y NG AL L +MRV
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
V + +++ A+L D++ G LH +++ +G + +L+ MY K +L+
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTGF-IVNALVSMYAKNDDLS 234
Query: 147 YARSVFDGFS-GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
AR +FDGF V W ++++ Y + E + LF +M G PN TI+S + C
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 206 GTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
+ GK +HA L++ S + + A I MY +CG A + + N D++
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+++I Y Q E + F M G + +E++M S++ + +L G +H+Y+ K
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G + ++ +L+DMY+KC R F D+D++ W +I+G A ALEL
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 385 FVEMEAQGVIPNDITFIGALKACS 408
F ++ + + +++ L+A S
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASS 498
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 203/391 (51%), Gaps = 10/391 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++G+ ++ V N +I MY + + + F +M DKD +SW+T+I Y +N E
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL+L RD+ R++ E+ + SI+ + L + + K +H +++R G + L
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK---GLLDTVIQNEL 527
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+D+Y KC+N+ YA VF+ G +VSWT+MI+ N +E + LF +M G+ +
Sbjct: 528 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADS 587
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+ +L ++ ++ AL G+ +H + LR G + +A A +DMY CGD +SA+ VFD
Sbjct: 588 VALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDR 647
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
IE K L+ ++MI+AY C ++F +M + P+ I+ ++LL C+ AG L+ G
Sbjct: 648 IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
Query: 316 KWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-AATDRDILMWNVMISGCA 373
+ ++ + ++ + LVDM + + + T+ +W +++ C
Sbjct: 708 RGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR 767
Query: 374 MLGD---GEAALELFVEMEAQGVIPNDITFI 401
+ GE A + +E+E + P ++ +
Sbjct: 768 SHSEKEIGEIAAQRLLELEPKN--PGNLVLV 796
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 11/361 (3%)
Query: 97 SIIHVFAELVDL-------KLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
S + FA +++L G+ LH + + + L+ L+ MY KC +L A
Sbjct: 78 SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAE 136
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
VFD + +W TMI Y+ + L+ MR EGV + +L+K C +
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMI 268
+ G LH+ ++ G + + A + MY K D +AR +FD + K D ++ ++++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI- 327
S+Y+ + E ++F +M+ G PN T+VS L C ++GK IH+ + K
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
+ + +L+ MY +CG + R+ + D++ WN +I G + ALE F +
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
M A G ++++ + A L G L H V G ++ ++D+ S+
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL-HAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 448 L 448
L
Sbjct: 436 L 436
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 110/294 (37%), Gaps = 40/294 (13%)
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVS-LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK-L 333
C D V Q D + + + +L LC K ++ G+ +HS I K + L
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 334 KTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGV 393
LV MY KCG +D ++F DR WN MI G+ +AL L+ M +GV
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 178
Query: 394 IPNDITFIGALKACSHSGLLQEGKRLFHKMV----HDFGLVPK--VEHYGCMVDLLSRAG 447
+F LKAC+ ++ G L +V H G + V Y DL +
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 448 LLD-------------------------EAQKLIIDMPMR---PNNVVLGSLLAACKLHK 479
L D E +L +M M PN+ + S L AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 480 NVKLGEWAAGQFLSLESHKCGY---NVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
KLG+ L +H N L++ +Y K I R M +A +
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIA-MYTRCGKMPQAERILRQMNNADV 351
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/547 (36%), Positives = 304/547 (55%), Gaps = 13/547 (2%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-GVIP 193
L+ YVK K + AR +FD ++VSWT++I+GY + +F KM + V P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
NE T S+ K C + GK +HA +G+ ++V++++ +DMYGKC D +AR VF
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 254 DSI--ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC--GIRPNEITMVSLLVLCAKA 309
DS+ ++++ ++MI+AYAQ E ++F N R N+ + S++ C+
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
G L+ GK H + + G + +T + TSL+DMYAKCG + ++F ++ + MI
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
A G GEAA++LF EM A + PN +T +G L ACSHSGL+ EG M +G+
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKL--IIDMPMRPNNVVLGSLLAACKLHKNVKLGEWA 487
VP HY C+VD+L R G +DEA +L I++ ++ G+LL+A +LH V++ A
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEA 429
Query: 488 AGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHE 547
+ + + + +SN YA W D +R M+ +G KE S IE SV+
Sbjct: 430 SKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYV 489
Query: 548 FIMGDREHPETRRIYEIVAEMREKLDNVGY------TPDISAVLMNIDGEEKETALNYHS 601
F GD E+ I + ++ +++ G+ S+V +++D E K+ ++ H
Sbjct: 490 FHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHC 549
Query: 602 EKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGS 661
E+LA+AYGL+ + G+ IRI+ NLR+C D H A L+S I REI+VRD NRFH FK GS
Sbjct: 550 ERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGS 609
Query: 662 CSCHDYW 668
C+C DYW
Sbjct: 610 CTCRDYW 616
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D F N +++ Y ++ + AR+LFD+M + + VSW+++I Y G AL +
Sbjct: 59 GFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 81 RDMRVAR-VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDM 138
+ M R V P+E S+ + L + ++GK +H R G + + +S+SL+DM
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHA---RLEISGLRRNIVVSSSLVDM 175
Query: 139 YVKCKNLAYARSVFDGF--SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI--PN 194
Y KC ++ AR VFD G ++VSWT+MI Y +E I LF N
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN 235
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+ + S++ C ++ L++GK+ H R G + V+AT+ +DMY KCG A +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
I ++ ++MI A A+ + +F +M I PN +T++ +L C+ +G +
Sbjct: 296 RIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNE 355
Query: 315 G-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL---FAAATDRDILMWNVMIS 370
G +++ +K G+ D++ T +VDM + G +D Y L ++ L+W ++S
Sbjct: 356 GLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
Query: 371 GCAMLGDGEAALE 383
+ G E E
Sbjct: 416 AGRLHGRVEIVSE 428
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 7/297 (2%)
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
M G+I +L LFV + + LV + F LLH TL+ G
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLKTKAF-LVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 226 ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
+ Y K + +AR +FD + +++ +++IS Y +F
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 286 QMN-DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC 344
+M+ D + PNE T S+ C+ +GK IH+ ++ G++R+ + +SLVDMY KC
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 345 GDIDTTYRLFAA--ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI--PNDITF 400
D++T R+F + R+++ W MI+ A G A+ELF A N
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
+ ACS G LQ GK + H +V G ++D+ ++ G L A+K+ +
Sbjct: 240 ASVISACSSLGRLQWGK-VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 19/284 (6%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV--DKDAVSWSTMIRNYGRNGLLDEAL 77
+G R++ V ++++ MYG+ +E AR++FD M+ ++ VSW++MI Y +N EA+
Sbjct: 160 SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 78 DLLRDMRVARV--KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+L R A + ++ + S+I + L L+ GK HG V R +S ++TSL
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY--ESNTVVATSL 277
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+DMY KC +L+ A +F S++S+T+MI ++LF +M + PN
Sbjct: 278 LDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNY 337
Query: 196 ITILSLVKEC---GTV-EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
+T+L ++ C G V E LE+ L+ + G+ T +DM G+ G A
Sbjct: 338 VTLLGVLHACSHSGLVNEGLEYLSLM---AEKYGVVPDSRHYTCVVDMLGRFGRVDEAYE 394
Query: 252 VFDSIE---NKDLMICSAMISA---YAQTNCIDEVFDIFVQMND 289
+ +IE + ++ A++SA + + + E +Q N
Sbjct: 395 LAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQ 438
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
+H+ K G DT LV Y K +I+T +LF + +++ W +ISG +G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 378 GEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
+ AL +F +M E + V PN+ TF KACS + GK + H + GL +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI-HARLEISGLRRNIVVS 169
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVV 467
+VD+ + ++ A+++ M NVV
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVV 200
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/536 (36%), Positives = 304/536 (56%), Gaps = 17/536 (3%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI------T 197
+L++A +F W +I G+ +++ + + M ++ + I T
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+K C LH R G++ +L T +D Y K GD SA +FD +
Sbjct: 112 CSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP 171
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+D+ +A+I+ N E +++ +M GIR +E+T+V+ L C+ G ++ G+
Sbjct: 172 VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN 231
Query: 318 I-HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAML 375
I H Y + I + + +DMY+KCG +D Y++F T + ++ WN MI+G A+
Sbjct: 232 IFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
G+ ALE+F ++E G+ P+D++++ AL AC H+GL++ G +F+ M G+ ++H
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKH 345
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
YGC+VDLLSRAG L EA +I M M P+ V+ SLL A +++ +V++ E A+ + +
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
+ G VL+SN+YAA+ +W DV +R M + K PG+S IE G++HEF D+ H
Sbjct: 406 VNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSH 465
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAP 615
+ R IYE + E+R K+ GY VL +I EEKE AL YHSEKLA+AYGL+ +
Sbjct: 466 EQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDG 525
Query: 616 G---APIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+P+R++ NLR+C D H +S+IY REIIVRDR RFH FK+GSCSC D+W
Sbjct: 526 ADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 173/371 (46%), Gaps = 17/371 (4%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G L FA Q+F + W+ +IR + + A R M S I + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 100 HVFAELVDLKLGKALHGYVMRNRNC--GQSGVP----LSTSLIDMYVKCKNLAYARSVFD 153
L +AL M +C + G+ L T+L+D Y K +L A +FD
Sbjct: 111 TCSFTLK--ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFD 168
Query: 154 GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEF 213
+ SW +IAG + N +E + L+ +M EG+ +E+T+++ + C + ++
Sbjct: 169 EMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 214 GK-LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC-SAMISAY 271
G+ + H ++ N V+++ A IDMY KCG A VF+ K ++ + MI+ +
Sbjct: 229 GENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
A +IF ++ D GI+P++++ ++ L C AG +E G + + + +G++R+
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNM 343
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
K +VD+ ++ G + + + + + D ++W ++ + D E A E++
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 391 QGVIPNDITFI 401
GV ND F+
Sbjct: 404 MGV-NNDGDFV 413
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 9/231 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G D +C ++ Y + G L A +LFD+M +D SW+ +I EA++L
Sbjct: 139 GLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELY 198
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKAL-HGYVMRNRNCGQSGVPLSTSLIDMY 139
+ M ++ SE+ +++ + + L D+K G+ + HGY N V +S + IDMY
Sbjct: 199 KRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-------VIVSNAAIDMY 251
Query: 140 VKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
KC + A VF+ F+G S+V+W TMI G+ + + +F K+ G+ P++++
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSY 311
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
L+ + C +E+G + G+ ++ +D+ + G R A
Sbjct: 312 LAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREA 362
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 362/666 (54%), Gaps = 31/666 (4%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
+ ++V + N +I MY + G++ +ARQ+FD M +++ VSW+ +I Y + G E L
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR-NRNCGQSGVPLSTSLIDMYV 140
M ++ P+E + S++ + GK +HG ++ +C + ++ ++I MY
Sbjct: 152 SM-LSHCFPNEFTLSSVL----TSCRYEPGKQVHGLALKLGLHCS---IYVANAVISMYG 203
Query: 141 KCKNLAYAR---SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
+C + A A +VF+ ++V+W +MIA + N + I +F++M +GV + T
Sbjct: 204 RCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT 263
Query: 198 IL----SLVKECGTV--EALEFGKLLHAFTLRNGITISVVLATAFIDMYGK-CGDFRSAR 250
+L SL K V E + LH+ T+++G+ +ATA I +Y + D+
Sbjct: 264 LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCY 323
Query: 251 YVFDSIEN-KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
+F + + +D++ + +I+A+A + + +F Q+ + P+ T S+L CA
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
+ IH+ + K G DT L SL+ YAKCG +D R+F RD++ WN M+
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
++ G ++ L +F +M+ + P+ TFI L ACSH+G ++EG R+F M
Sbjct: 443 KAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAG 489
+P++ HY C++D+LSRA EA+++I MPM P+ VV +LL +C+ H N +LG+ AA
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD 559
Query: 490 QFLSL-ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEF 548
+ L E + MSNIY AE + + + + M + KEP +S E+ VHEF
Sbjct: 560 KLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
Query: 549 IMGDREHPETRRIYEIVAEMREKLDNVGYTPDI-SAVLMNIDGEEKETALNYHSEKLAMA 607
G R P+ +Y + + L +GY P++ SA D E++E L +HSEKLA+A
Sbjct: 620 ASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALA 679
Query: 608 YGLISVAPGAP-----IRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSC 662
+ ++ + I+I+KN R+C D HN L S++ G+EI++RD NRFHHFK+ SC
Sbjct: 680 FAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSC 739
Query: 663 SCHDYW 668
SC+DYW
Sbjct: 740 SCNDYW 745
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 215/430 (50%), Gaps = 23/430 (5%)
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRN 123
+R R+G + A+ L V S+ A ++ AE +L G LH +++ +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVEL--QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPY 90
Query: 124 CGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF 183
C V L+ LI+MY KC N+ YAR VFD ++VSWT +I GY+ N EG LF
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 184 VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC 243
M PNE T+ S++ C E GK +H L+ G+ S+ +A A I MYG+C
Sbjct: 151 SSMLSH-CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 244 GDFRSAR---YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMV 300
D +A VF++I+ K+L+ ++MI+A+ N + +F++M+ G+ + T++
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
Query: 301 SLLVLCAKAGSL---EMGK---WIHSYIDKQGIKRDTKLKTSLVDMYAK-CGDIDTTYRL 353
++ K+ L E+ K +HS K G+ T++ T+L+ +Y++ D Y+L
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 354 FAAATD-RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
F + RDI+ WN +I+ A+ D E A+ LF ++ + + P+ TF LKAC +GL
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGL 382
Query: 413 LQEGKRL-FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSL 471
+ L H V G + ++ ++ G LD ++ DM R + V S+
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSM 441
Query: 472 LAACKLHKNV 481
L A LH V
Sbjct: 442 LKAYSLHGQV 451
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 173/370 (46%), Gaps = 19/370 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEV--GSLEF-ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
G H ++V NA+I MYG G+ + A +F+ + K+ V+W++MI + L +A+
Sbjct: 187 GLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAI 246
Query: 78 DLLRDMR---VARVKPSEIAMISIIHVFAELVDLKLGKA---LHGYVMRNRNCGQSGVPL 131
+ M V + + + + S ++ ++LV ++ K LH +++ Q+ V
Sbjct: 247 GVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEV-- 304
Query: 132 STSLIDMYVK-CKNLAYARSVFDGFSGA-SIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+T+LI +Y + ++ +F S IV+W +I + + I LF ++R+E
Sbjct: 305 ATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQE 363
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+ P+ T S++K C + +HA ++ G VL + I Y KCG
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
VFD ++++D++ ++M+ AY+ +D + +F +M+ I P+ T ++LL C+ A
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHA 480
Query: 310 GSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNV 367
G +E G + S +K ++DM ++ + D D ++W
Sbjct: 481 GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 368 MISGCAMLGD 377
++ C G+
Sbjct: 541 LLGSCRKHGN 550
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF D + N++I Y + GSL+ ++FD M +D VSW++M++ Y +G +D L
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILP 456
Query: 79 LLRDMRVARVKPSEIAMIS 97
+ + M + + IA++S
Sbjct: 457 VFQKMDINPDSATFIALLS 475
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 327/626 (52%), Gaps = 7/626 (1%)
Query: 48 LFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV-ARVKPSEIAMISIIHVFAELV 106
L D + K V+ + I EA +L + + K +++ L
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLK 137
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
++ K ++G++M N + + ++ M+VKC + AR +FD ++ S+ ++
Sbjct: 138 SIRCVKRVYGFMMSNG--FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
I+G+++ N E LF M E T +++ + ++ GK LH L+ G+
Sbjct: 196 ISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV 255
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
+ ++ IDMY KCGD AR F+ + K + + +I+ YA +E +
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
M D G+ ++ T+ ++ + K LE+ K H+ + + G + + T+LVD Y+K G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
+DT +F ++I+ WN ++ G A G G A++LF +M A V PN +TF+ L A
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSA 435
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
C++SGL ++G +F M G+ P+ HY CM++LL R GLLDEA I P++
Sbjct: 436 CAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN 495
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMR 526
+ +LL AC++ +N++LG A + + K G V+M N+Y + K + + + +
Sbjct: 496 MWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLE 555
Query: 527 DAGISKEPGVSSIEVNGSVHEFIMGDR--EHPET--RRIYEIVAEMREKLDNVGYTPDIS 582
G+S P + +EV H F+ GDR + ET R+IY+ V E+ E++ GY+ +
Sbjct: 556 SKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQ 615
Query: 583 AVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIY 642
+L ++D +E+E YHSEKLA+AYGL++ P++I +N R+C + H +S +
Sbjct: 616 HLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVT 675
Query: 643 GREIIVRDRNRFHHFKEGSCSCHDYW 668
GRE++VRD +RFHHFKEG CSC YW
Sbjct: 676 GREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 4/361 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F NGF + ++ N I++M+ + G + AR+LFD++ +++ S+ ++I + G E
Sbjct: 148 FMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVE 207
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A +L + M ++ A L + +GK LH ++ + V S L
Sbjct: 208 AFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV--SCGL 265
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
IDMY KC ++ AR F+ + V+W +IAGY E + L MR GV ++
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T+ +++ + LE K HA +RNG +V TA +D Y K G +ARYVFD
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ K+++ +A++ YA + +F +M + PN +T +++L CA +G E G
Sbjct: 386 LPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Query: 316 KWIH-SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL-MWNVMISGCA 373
I S + GIK ++++ + G +D A + + MW +++ C
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACR 505
Query: 374 M 374
M
Sbjct: 506 M 506
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 320/623 (51%), Gaps = 41/623 (6%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV-DKDAVSWSTMIRNYGRNGLLDEAL 77
+ GF DV V N ++ MY + + A LF+ M +K+ V+W++M+ Y +NG +A+
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
+ RD+R + ++ S++ A + ++G +H ++++ ++ + + ++LID
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG--FKTNIYVQSALID 270
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
MY KC+ + AR++ +G +VSW +MI G + + E + +F +M + ++ T
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 198 ILSLVKECGTVEALEF--GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
I S++ C + E H ++ G ++ A +DMY K G SA VF+
Sbjct: 331 IPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ KD++ +A+++ DE +F M GI P++I S+L A+ LE G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H K G + SLV MY KCG ++ +F + RD++ W +I G A
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA-- 507
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
+GLL++ +R F M +G+ P EH
Sbjct: 508 ---------------------------------KNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
Y CM+DL R+G + ++L+ M + P+ V ++LAA + H N++ GE AA + LE
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELE 594
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
+ V +SN+Y+A + + +++RR M+ ISKEPG S +E G VH F+ DR H
Sbjct: 595 PNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRH 654
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAP 615
P IY V EM + GY D+S L ++D E KE L YHSEKLA+A+GL+ V
Sbjct: 655 PRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPS 714
Query: 616 GAPIRIVKNLRVCDDYHNATMLL 638
GAPIRI+KNLRVC D H+A LL
Sbjct: 715 GAPIRIIKNLRVCGDCHSAMKLL 737
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 232/461 (50%), Gaps = 13/461 (2%)
Query: 8 SARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNY 67
S R AR + RD F N +I+ Y L A +LF K+ +SW+ +I Y
Sbjct: 41 SGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGY 100
Query: 68 GRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQS 127
++G EA +L +M+ +KP+E + S++ + LV L G+ +HG+ ++ +
Sbjct: 101 CKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK------T 154
Query: 128 GVPLSTSLID----MYVKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRL 182
G L ++++ MY +CK ++ A +F+ G + V+WT+M+ GY + I
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 183 FVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGK 242
F +RREG N+ T S++ C +V A G +H +++G ++ + +A IDMY K
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 243 CGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
C + SAR + + +E D++ ++MI + I E +F +M++ ++ ++ T+ S+
Sbjct: 275 CREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSI 334
Query: 303 LVLCAKAGS-LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L A + + +++ H I K G + +LVDMYAK G +D+ ++F ++D
Sbjct: 335 LNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKD 394
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
++ W +++G G + AL+LF M G+ P+ I L A + LL+ G+++
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHG 454
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
+ G + +V + ++ G L++A + M +R
Sbjct: 455 NYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 45/387 (11%)
Query: 17 CC--ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
CC ++GF +++V +A+I MY + +E AR L + M D VSW++MI R GL+
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFA-ELVDLKLGKALHGYVMRNRNCGQSGVPL-S 132
EAL + M +K + + SI++ FA ++K+ + H +++ G + L +
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT---GYATYKLVN 367
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
+L+DMY K + A VF+G ++SWT ++ G H + +E ++LF MR G+
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P++I S++ + LEFG+ +H +++G S+ + + + MY KCG A +
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F+S+E +DL+ + +I YA+ +++ F M
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTV---------------------- 525
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD-IDTTYRLFAAATDRDILMWNVMISG 371
GI + ++D++ + GD + L + D +W +++
Sbjct: 526 ------------YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAA 573
Query: 372 CAMLG---DGEAALELFVEMEAQGVIP 395
G +GE A + +E+E +P
Sbjct: 574 SRKHGNIENGERAAKTLMELEPNNAVP 600
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 10/361 (2%)
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
++I Y + L+ A +F + +SW +I+GY + + E LF +M+ +G+ P
Sbjct: 64 TMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKP 123
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
NE T+ S+++ C ++ L G+ +H T++ G + V + + MY +C A Y+F
Sbjct: 124 NEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF 183
Query: 254 DSIE-NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
+++E K+ + ++M++ Y+Q + + F + G + N+ T S+L CA +
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
+G +H I K G K + ++++L+DMYAKC ++++ L D++ WN MI GC
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
G AL +F M + + +D T L + S + H ++ G
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDM---------PMRPNNVVLGSLLAACKLHKNVKL 483
+VD+ ++ G++D A K+ M + N GS A KL N+++
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 484 G 484
G
Sbjct: 424 G 424
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 2 LSHTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWS 61
LS T + + + G+ V NA++ MY + G ++ A ++F+ M++KD +SW+
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWT 399
Query: 62 TMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN 121
++ NG DEAL L +MRV + P +I S++ AEL L+ G+ +HG
Sbjct: 400 ALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHG----- 454
Query: 122 RNCGQSGVPLS----TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN 177
N +SG P S SL+ MY KC +L A +F+ +++WT +I GY L
Sbjct: 455 -NYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLE 513
Query: 178 EGIRLFVKMRR-EGVIP 193
+ R F MR G+ P
Sbjct: 514 DAQRYFDSMRTVYGITP 530
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 325/577 (56%), Gaps = 9/577 (1%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL-L 80
+ +D+FV ++ I MY E+G +E +R++FD V+++ W+TMI Y +N L E+++L L
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+ + E+ + + L ++LG+ HG+V ++N + + + SL+ MY
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV--SKNFRELPIVIVNSLMVMYS 364
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+C ++ + VF +VSW TMI+ ++ +EG+ L +M+++G + IT+ +
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS--IEN 258
L+ + E GK HAF +R GI + + IDMY K G R ++ +F+
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+D ++MIS Y Q ++ F +F +M + IRPN +T+ S+L C++ GS+++GK +
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + +Q + ++ + ++LVDMY+K G I +F+ +R+ + + MI G G G
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMG 603
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
E A+ LF+ M+ G+ P+ ITF+ L ACS+SGL+ EG ++F +M + + P EHY C
Sbjct: 604 ERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCC 663
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVL-GSLLAACKLHKNVKLGEWAAGQFLSLESH 497
+ D+L R G ++EA + + + N L GSLL +CKLH ++L E + + +
Sbjct: 664 ITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKG 723
Query: 498 K--CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
K GY VL+SN+YA E KW V +RR MR+ G+ KE G S IE+ G V+ F+ D+EH
Sbjct: 724 KNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEH 783
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEE 592
P + IY+++ + + + + + V +++ +E
Sbjct: 784 PHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 232/503 (46%), Gaps = 63/503 (12%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKP----SEIAM 95
G+ + ARQLFD + V W+T+I + N L EAL L R+ + P
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL--LFYSRMKKTAPFTNCDAYTY 110
Query: 96 ISIIHVFAELVDLKLGKALHGYVMRNRNCGQ-SGVPLSTSLIDMYVKCKNLA------YA 148
S + AE +LK GKA+H +++R C Q S + SL++MYV C N
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIR---CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV 167
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
R VFD ++V+W T+I+ Y+ T E R F M R V P+ ++ +++
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 209 EALEFGKLLHAFTLRNG--ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
+++ + + L+ G + + ++ I MY + GD S+R VFDS +++ + +
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 267 MISAYAQTNCIDEVFDIFVQ-MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
MI Y Q +C+ E ++F++ + I +E+T + + +E+G+ H ++ K
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
+ + SL+ MY++CG + ++ +F + +RD++ WN MIS G + L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC---MVDL 442
EM+ QG + IT L A S+ + GK+ H F + ++ G ++D+
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ-----THAFLIRQGIQFEGMNSYLIDM 462
Query: 443 LSRAGLLDEAQKL------------------------------------IIDMPMRPNNV 466
S++GL+ +QKL +++ +RPN V
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 467 VLGSLLAACKLHKNVKLGEWAAG 489
+ S+L AC +V LG+ G
Sbjct: 523 TVASILPACSQIGSVDLGKQLHG 545
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 192/371 (51%), Gaps = 8/371 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F +N + + N++++MY GS+ + +F M ++D VSW+TMI + +NGL DE
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
L L+ +M+ K I + +++ + L + ++GK H +++R G +++ L
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ---GIQFEGMNSYL 459
Query: 136 IDMYVKCKNLAYARSVFD--GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
IDMY K + ++ +F+ G++ +W +MI+GY + + +F KM + + P
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
N +T+ S++ C + +++ GK LH F++R + +V +A+A +DMY K G + A +F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+ ++ + + MI Y Q + +F+ M + GI+P+ IT V++L C+ +G ++
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 314 MG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL--MWNVMIS 370
G K + I+ ++ + DM + G ++ Y + + +W ++
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 371 GCAMLGDGEAA 381
C + G+ E A
Sbjct: 700 SCKLHGELELA 710
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/525 (36%), Positives = 292/525 (55%), Gaps = 9/525 (1%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA-LDLLRDMRVARV 88
N +I E+G ++ LF + + S++ MIR EA L L R M+ + +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAY 147
KP + + A+L ++ +G+++H + + G + V ++ SLI MY KC + Y
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK---VGLERDVHINHSLIMMYAKCGQVGY 185
Query: 148 ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGT 207
AR +FD + VSW +MI+GY + + LF KM EG P+E T++S++ C
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
+ L G+LL + I +S L + I MYGKCGD SAR VF+ + KD + +AM
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
I+ Y+Q E F +F +M G+ P+ T+ ++L C G+LE+GK I ++ + +
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
+ + + T LVDMY KCG ++ R+F A ++ WN MI+ A G + AL LF
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR 425
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
M V P+DITFIG L AC H+GL+ +G R FH+M FGLVPK+EHY ++DLLSRAG
Sbjct: 426 M---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 482
Query: 448 LLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSL-ESHKCGYNVLMS 506
+LDEA + + P +P+ ++L ++L AC K+V + E A + + E+ G V+ S
Sbjct: 483 MLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISS 542
Query: 507 NIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMG 551
N+ A W + + +R MRD G+ K PG S IE+ G + EF+ G
Sbjct: 543 NVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 196/374 (52%), Gaps = 10/374 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G RDV + +++IMMY + G + +AR+LFD++ ++D VSW++MI Y G +A+DL
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF 221
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R M +P E ++S++ + L DL+ G+ L + + G S L + LI MY
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI-TKKIGLSTF-LGSKLISMYG 279
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC +L AR VF+ V+WT MI Y +E +LF +M + GV P+ T+ +
Sbjct: 280 KCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLST 339
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ CG+V ALE GK + + ++ +AT +DMYGKCG A VF+++ K+
Sbjct: 340 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKN 399
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIH 319
+AMI+AYA E +F +M+ + P++IT + +L C AG + G ++ H
Sbjct: 400 EATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFH 456
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGD- 377
G+ + T+++D+ ++ G +D + + D +M ++ C D
Sbjct: 457 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDV 516
Query: 378 --GEAALELFVEME 389
E A+ + +EM+
Sbjct: 517 AIREKAMRMLMEMK 530
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 292/513 (56%), Gaps = 11/513 (2%)
Query: 38 EVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMIS 97
E +L +AR +F+ + W++MIR Y + D+AL ++M P
Sbjct: 53 ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG 157
++ + L D++ G +HG+V++ + + +ST L+ MY+ C + Y VF+
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGF--EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ 170
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
++V+W ++I+G+++ N ++ I F +M+ GV NE ++ L+ CG + + GK
Sbjct: 171 WNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWF 230
Query: 218 HAFT--------LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
H F ++ + +V+LAT+ IDMY KCGD R+ARY+FD + + L+ +++I+
Sbjct: 231 HGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
Y+Q +E +F+ M D GI P+++T +S++ G ++G+ IH+Y+ K G +
Sbjct: 291 GYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK 350
Query: 330 DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
D + +LV+MYAK GD ++ + F +D + W V+I G A G G AL +F M+
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 390 AQG-VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
+G P+ IT++G L ACSH GL++EG+R F +M GL P VEHYGCMVD+LSRAG
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 449 LDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI 508
+EA++L+ MP++PN + G+LL C +H+N++L + E G VL+SNI
Sbjct: 471 FEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNI 530
Query: 509 YAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
YA +W DV IR +M+ + K G SS+E
Sbjct: 531 YAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 185/369 (50%), Gaps = 15/369 (4%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F + GF +++V ++ MY G + + ++F+ + + V+W ++I + N +
Sbjct: 132 FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD 191
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-----QS--- 127
A++ R+M+ VK +E M+ ++ D+ GK HG++ + G QS
Sbjct: 192 AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL---QGLGFDPYFQSKVG 248
Query: 128 -GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
V L+TSLIDMY KC +L AR +FDG ++VSW ++I GY + E + +F+ M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 187 RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
G+ P+++T LS+++ + G+ +HA+ + G + A ++MY K GD
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVL 305
SA+ F+ +E KD + + +I A +E IF +M + G P+ IT + +L
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Query: 306 CAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDIL 363
C+ G +E G ++ D G++ + +VD+ ++ G + RL ++
Sbjct: 429 CSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 488
Query: 364 MWNVMISGC 372
+W +++GC
Sbjct: 489 IWGALLNGC 497
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 4 HTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM 63
H F+ F + GF +V + ++I MY + G L AR LFD M ++ VSW+++
Sbjct: 231 HGFLQGLGFDPYFQSKVGF--NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSI 288
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRN 123
I Y +NG +EAL + DM + P ++ +S+I +LG+++H YV +
Sbjct: 289 ITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF 348
Query: 124 CGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF 183
+ + +L++MY K + A+ F+ ++WT +I G + NE + +F
Sbjct: 349 VKDAAI--VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 184 VKMRREG-VIPNEITILSLVKECGTVEALEFGKLLHAFTLRN--GITISVVLATAFIDMY 240
+M+ +G P+ IT L ++ C + +E G+ A +R+ G+ +V +D+
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTVEHYGCMVDIL 465
Query: 241 GKCGDFRSARYVFDSIENK 259
+ G F A + ++ K
Sbjct: 466 SRAGRFEEAERLVKTMPVK 484
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 291/528 (55%), Gaps = 3/528 (0%)
Query: 144 NLAYARSVFDGF-SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSL 201
+L++A+ +FD F S S W +I G+ ++++ I + +M V P+ T
Sbjct: 54 SLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFA 113
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+K C ++++ +H +R+G ++AT+ + Y G A VFD + +DL
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ + MI ++ ++ ++ +M + G+ + T+V+LL CA +L MG +H
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRI 233
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
+ + +L+DMYAKCG ++ +F RD+L WN MI G + G G A
Sbjct: 234 ACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
+ F +M A GV PN ITF+G L CSH GL++EG F M F L P V+HYGCMVD
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVD 353
Query: 442 LLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY 501
L RAG L+ + ++I + V+ +LL +CK+H+N++LGE A + + LE+ G
Sbjct: 354 LYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGD 413
Query: 502 NVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRI 561
VLM++IY+A N + +R+ +R + PG S IE+ VH+F++ D+ HPE+ I
Sbjct: 414 YVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVI 473
Query: 562 YEIVAEMREKLDNVGYTP-DISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIR 620
Y + E+ + GY P D + + +A HSEKLA+AYGL+ G +R
Sbjct: 474 YSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLR 533
Query: 621 IVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
I KNLRVC D H+ T +S+ + REIIVRDR RFHHF +G CSC+DYW
Sbjct: 534 ITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 194/442 (43%), Gaps = 22/442 (4%)
Query: 39 VGSLEFARQLFDKM-VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARV-KPSEIAMI 96
GSL A+ LFD D W+ +IR + + ++ M ++ V +P
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
+ + + +HG V+R+ + V +TSL+ Y ++ A VFD
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGFLDDAIV--ATSLVRCYSANGSVEIASKVFDEMP 169
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKL 216
+VSW MI + H N+ + ++ +M EGV + T+++L+ C V AL G +
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
LH V ++ A IDMY KCG +A VF+ + +D++ ++MI Y
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH 289
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDTKLKT 335
E F +M G+RPN IT + LL+ C+ G ++ G + Q + + K
Sbjct: 290 GVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYG 349
Query: 336 SLVDMYAKCGDIDTTYRL-FAAATDRDILMWNVMISGCAM---LGDGEAALELFVEMEAQ 391
+VD+Y + G ++ + + +A++ D ++W ++ C + L GE A++ V++EA
Sbjct: 350 CMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAF 409
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
+ + A + + ++L HD VP S + D+
Sbjct: 410 NA-GDYVLMTSIYSAANDAQAFASMRKLIRS--HDLQTVPG----------WSWIEIGDQ 456
Query: 452 AQKLIIDMPMRPNNVVLGSLLA 473
K ++D M P + V+ S L
Sbjct: 457 VHKFVVDDKMHPESAVIYSELG 478
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 5/233 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+GF D V +++ Y GS+E A ++FD+M +D VSW+ MI + GL ++AL
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ + M V +++++ A + L +G LH R +S V +S +LIDM
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR--CESCVFVSNALIDM 252
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGY-IHTNNLNEGIRLFVKMRREGVIPNEIT 197
Y KC +L A VF+G +++W +MI GY +H + + E I F KM GV PN IT
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV-EAISFFRKMVASGVRPNAIT 311
Query: 198 ILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
L L+ C ++ G + + + +T +V +D+YG+ G ++
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R C+ VFV NA+I MY + GSLE A +F+ M +D ++W++MI YG +G
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 75 EALDLLRDMRVARVKPSEIAMISII 99
EA+ R M + V+P+ I + ++
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLL 316
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 308/563 (54%), Gaps = 9/563 (1%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
+++FV NA++ MY + G+LE ARQ+F++M D+D V+W+T+I +Y ++ EA DL + M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKC 142
+ + + S + + L GK +H ++ CG + +SLIDMY KC
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK---CGLDRDLHTGSSLIDMYSKC 577
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
+ AR VF S+VS +IAGY NNL E + LF +M GV P+EIT ++V
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 203 KECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIEN-KD 260
+ C E+L G H + G + L + + MY A +F + + K
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+++ + M+S ++Q +E + +M G+ P++ T V++L +C+ SL G+ IHS
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGE 379
I D +L+DMYAKCGD+ + ++F R +++ WN +I+G A G E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
AL++F M ++P++ITF+G L ACSH+G + +G+++F M+ +G+ +V+H CM
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKC 499
VDLL R G L EA I ++P+ + SLL AC++H + GE +A + + LE
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 500 GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETR 559
VL+SNIYA++ W + +R+ MRD G+ K PG S I+V H F GD+ H E
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996
Query: 560 RIYEIVAEMREKL-DNVGYTPDI 581
+I + ++ + + D+ PDI
Sbjct: 997 KIEMFLEDLYDLMKDDAVVNPDI 1019
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 226/452 (50%), Gaps = 8/452 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G D +I Y +G L+ AR LF +M D V+W+ MI +G+ G A++
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLID 137
+MR + VK + + S++ + +L LG +H ++ G S + + +SL+
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK---LGLASNIYVGSSLVS 370
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
MY KC+ + A VF+ + V W MI GY H ++ + LF+ M+ G ++ T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
SL+ C LE G H+ ++ + ++ + A +DMY KCG AR +F+ +
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
++D + + +I +Y Q E FD+F +MN CGI + + S L C L GK
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
+H K G+ RD +SL+DMY+KCG I ++F++ + ++ N +I+G + +
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NN 609
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E A+ LF EM +GV P++ITF ++AC L G + FH + G + E+ G
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG 668
Query: 438 -CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVL 468
++ + + + EA L ++ P ++VL
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELS-SPKSIVL 699
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 38/440 (8%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G R+ + A++ MY + + AR++F+ +VD + V W+ + Y + GL +EA+ +
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR +P +A +++I+ + ++LGK
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTY-----IRLGK---------------------------- 276
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
L AR +F S +V+W MI+G+ I F MR+ V T+ S
Sbjct: 277 ----LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ G V L+ G ++HA ++ G+ ++ + ++ + MY KC +A VF+++E K+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +AMI YA +V ++F+ M G ++ T SLL CA + LEMG HS
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
I K+ + ++ + +LVDMYAKCG ++ ++F DRD + WN +I +
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
A +LF M G++ + LKAC+H L +GK++ H + GL + ++
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLI 571
Query: 441 DLLSRAGLLDEAQKLIIDMP 460
D+ S+ G++ +A+K+ +P
Sbjct: 572 DMYSKCGIIKDARKVFSSLP 591
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 210/449 (46%), Gaps = 52/449 (11%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
NAI+ +Y + + +A + FD ++KD +W++M+ Y G + L + ++
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVM-----RNRNCGQSGVPLSTSLIDMYVKCKN 144
P++ ++ A +++ G+ +H ++ RN CG +L+DMY KC
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG-------GALVDMYAKCDR 210
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
++ AR VF+ + V WT + +GY+ E + +F +MR EG P+ + +++
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV--- 267
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
I+ Y + G + AR +F + + D++
Sbjct: 268 --------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ MIS + + C + F M ++ T+ S+L +L++G +H+ K
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G+ + + +SLV MY+KC ++ ++F A +++ + WN MI G A G+ +EL
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F++M++ G +D TF L C+ S L+ G + FH ++ L + +VD+ +
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 445 RAGLLDEAQKLIIDMPMRPN---NVVLGS 470
+ G L++A+++ M R N N ++GS
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGS 503
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 145/307 (47%), Gaps = 17/307 (5%)
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
AL GK +H+ +L GI L A +D+Y KC A FD +E KD+ ++M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
Y+ +V FV + + I PN+ T +L CA+ ++E G+ IH + K G++R
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 330 DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
++ +LVDMYAKC I R+F D + + W + SG G E A+ +F M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 390 AQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
+G P+ + F+ + G L++ + LF +M P V + M+ + G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCE 308
Query: 450 DEAQKLIIDM---PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMS 506
A + +M ++ LGS+L+A + N+ L G + E+ K G L S
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL-----GLVVHAEAIKLG---LAS 360
Query: 507 NIYAAEN 513
NIY +
Sbjct: 361 NIYVGSS 367
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 41/350 (11%)
Query: 108 LKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
L++GKA+H ++ G S L +++D+Y KC ++YA FD F + +W +M
Sbjct: 76 LRIGKAVHS---KSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSM 131
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
++ Y + +R FV + + PN+ T ++ C +EFG+ +H ++ G+
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
+ A +DMY KC AR VF+ I + + + + + S Y + +E +F +
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
M D G RP+ + V++ I++YI + G +D +L
Sbjct: 252 MRDEGHRPDHLAFVTV---------------INTYI-RLGKLKDARL------------- 282
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
LF + D++ WNVMISG G A+E F M V T L A
Sbjct: 283 ------LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
L G + H GL + +V + S+ ++ A K+
Sbjct: 337 IGIVANLDLG-LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 314/632 (49%), Gaps = 45/632 (7%)
Query: 41 SLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIH 100
S +++ +F +++ + +IR N + ++ M VKP + ++
Sbjct: 75 SPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK 134
Query: 101 VFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVF----DGFS 156
++L LG+ALH ++N S V LS L+DMY K L +A VF D
Sbjct: 135 SNSKLGFRWLGRALHAATLKNFVDCDSFVRLS--LVDMYAKTGQLKHAFQVFEESPDRIK 192
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKL 216
SI+ W +I GY +++ LF M
Sbjct: 193 KESILIWNVLINGYCRAKDMHMATTLFRSMPE---------------------------- 224
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
RN + S + I Y G+ A+ +F+ + K+++ + +I+ ++QT
Sbjct: 225 ------RNSGSWSTL-----IKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
+ + +M + G++PNE T+ ++L C+K+G+L G IH YI GIK D + T+
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
LVDMYAKCG++D +F+ +DIL W MI G A+ G A++ F +M G P+
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPD 393
Query: 397 DITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
++ F+ L AC +S + G F M D+ + P ++HY +VDLL RAG L+EA +L+
Sbjct: 394 EVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 457 IDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWG 516
+MP+ P+ +L ACK HK + E + L L+ CG + + +A++
Sbjct: 454 ENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQ 513
Query: 517 DVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVG 576
DV R +++ + G S IE++G +++F GD H T+ I + E+ G
Sbjct: 514 DVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKG 573
Query: 577 YTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATM 636
Y P + +I+ EEKE HSEKLA+ G + APG IRI+KNLR+C D H+
Sbjct: 574 YNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMK 633
Query: 637 LLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
+S+I R+I++RD +FHHFK+G CSC DYW
Sbjct: 634 YVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 159/381 (41%), Gaps = 58/381 (15%)
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
+ P E IS+IH + L+ +H ++R GV LS+ + V C +L
Sbjct: 24 QASPDESHFISLIHACKDTASLR---HVHAQILRR------GV-LSSRVAAQLVSCSSLL 73
Query: 147 ----YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
Y+ S+F + +I G +R F+ M R GV P+ +T ++
Sbjct: 74 KSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVL 133
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF----DSIEN 258
K + G+ LHA TL+N + + + +DMY K G + A VF D I+
Sbjct: 134 KSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+ ++I + +I+ Y + + +F M + G W
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPE----------------------RNSGSW- 230
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
++L+ Y G+++ +LF +++++ W +I+G + GD
Sbjct: 231 ----------------STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
E A+ + EM +G+ PN+ T L ACS SG L G R+ H + D G+
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI-HGYILDNGIKLDRAIGTA 333
Query: 439 MVDLLSRAGLLDEAQKLIIDM 459
+VD+ ++ G LD A + +M
Sbjct: 334 LVDMYAKCGELDCAATVFSNM 354
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
+ +I Y + G L A+QLF+ M +K+ VSW+T+I + + G + A+ +M +K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TSLIDMYVKCKNL 145
P+E + +++ ++ L G +HGY++ N G+ L T+L+DMY KC L
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDN------GIKLDRAIGTALVDMYAKCGEL 344
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
A +VF + I+SWT MI G+ ++ I+ F +M G P+E+ L+++ C
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 206 GTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-NKDLMI 263
++ G + L I ++ +D+ G+ G A + +++ N DL
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 264 CSAMISA 270
+A+ A
Sbjct: 465 WAALYRA 471
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 28/294 (9%)
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF-RSARY 251
P+E +SL+ C +L + +HA LR G+ S V A C +S Y
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLV-----SCSSLLKSPDY 78
Query: 252 ---VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
+F + E ++ + +A+I + + F+ M G++P+ +T +L +K
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILM 364
G +G+ +H+ K + D+ ++ SLVDMYAK G + +++F + DR IL+
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
WNV+I+G D A LF M + N ++ +K SG L K+LF M
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLGSLLAAC 475
V + +++ S+ G + A +M ++PN + ++L+AC
Sbjct: 255 EK-----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ +NG D + A++ MY + G L+ A +F M KD +SW+ MI+ + +G +
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQ 377
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLG 111
A+ R M + KP E+ ++++ ++ LG
Sbjct: 378 AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 298/553 (53%), Gaps = 11/553 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++G+ DV V ++++ MY + E + Q+FD+M ++D SW+T+I + ++G ++AL+
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL----STS 134
L M + +P+ +++ I + L+ L+ GK +H R C + G L +++
Sbjct: 195 LFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIH------RKCVKKGFELDEYVNSA 248
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+DMY KC L AR VF S+V+W +MI GY+ + + + +M EG P+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+ T+ S++ C L GK +H + +R+ + + + + ID+Y KCG+ A VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ + MIS+Y + +++ QM G++P+ +T S+L C++ +LE
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
GK IH I + ++ D L ++L+DMY+KCG+ +R+F + +D++ W VMIS
Sbjct: 429 GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G AL F EM+ G+ P+ +T + L AC H+GL+ EG + F +M +G+ P +E
Sbjct: 489 HGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIE 548
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV-VLGSLLAACKLHKNVKLGEWAAGQFLS 493
HY CM+D+L RAG L EA ++I P +N +L +L +AC LH LG+ A +
Sbjct: 549 HYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVE 608
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR 553
+++ N+YA+ W +R M++ G+ K+PG S IE++ V F DR
Sbjct: 609 NYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR 668
Query: 554 EHPETRRIYEIVA 566
H +YE +A
Sbjct: 669 SHLRAENVYECLA 681
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 194/376 (51%), Gaps = 10/376 (2%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R C + GF D +V +A++ MYG+ LE AR++F KM K V+W++MI+ Y G
Sbjct: 232 RKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK 291
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+++L M + +PS+ + SI+ + +L GK +HGYV+ R+ + + ++ S
Sbjct: 292 SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI--RSVVNADIYVNCS 349
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LID+Y KC A +VF SW MI+ YI N + + ++ +M GV P+
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+T S++ C + ALE GK +H + + +L +A +DMY KCG+ + A +F+
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
SI KD++ + MISAY E F +M G++P+ +T++++L C AG ++
Sbjct: 470 SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 315 G-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF--AAATDRDILMWNVMISG 371
G K+ K GI+ + + ++D+ + G + Y + T + + + + S
Sbjct: 530 GLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSA 589
Query: 372 CAM-----LGDGEAAL 382
C + LGD A L
Sbjct: 590 CCLHLEHSLGDRIARL 605
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGAS-IVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
V L SLI++Y CK+ AR VF+ F S + W ++++GY + ++ + +F ++
Sbjct: 39 VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL 98
Query: 188 REGV-IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
+ +P+ T +++K G + G+++H +++G VV+A++ + MY K F
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
++ VFD + +D+ + +IS + Q+ ++ ++F +M G PN +++ + C
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
++ LE GK IH K+G + D + ++LVDMY KC ++ +F + ++ WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGK 417
MI G GD ++ +E+ M +G P+ T L ACS S L GK
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 40/330 (12%)
Query: 198 ILSLVKEC-GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
+LSL++EC + ++L KL+H L G+ VVL + I++Y C D SAR+VF++
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 257 E-NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI-RPNEITMVSLLVLCAKAGSLEM 314
+ D+ I ++++S Y++ + + ++F ++ +C I P+ T +++ G +
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G+ IH+ + K G D + +SLV MYAK + + ++F +RD+ WN +IS
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD-FGLVPKV 433
G+ E ALELF ME+ G PN ++ A+ ACS L+ GK + K V F L V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMP--------------------------------- 460
+VD+ + L+ A+++ MP
Sbjct: 246 N--SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 461 -MRPNNVVLGSLLAACKLHKNVKLGEWAAG 489
RP+ L S+L AC +N+ G++ G
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHG 333
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 301/525 (57%), Gaps = 5/525 (0%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F +NG FV +++ Y + G+ A F ++ D+D SW+++I + R+G ++E
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+ D+ +M+ + P + + +I+ +++ + GKA HG+V+R+ C + SL
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH--CFSLDSTVCNSL 372
Query: 136 IDMYVKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
+ MY K + L+ A +F S + +W TM+ GY + I LF K++ G+ +
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+ S++ C + A+ GK LH + ++ + +++ + + ID+YGK GD A +F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 492
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ +++ +AMI++Y ++ +F +M +P+ IT+V+LL+ C GSLE
Sbjct: 493 EADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G+ IH YI + + + L +L+DMYAKCG ++ + LF A +D + WNVMISG M
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
GD E+A+ LF +ME V P TF+ L AC+H+GL+++GK+LF KM H + + P ++
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLK 670
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSL 494
HY C+VDLLSR+G L+EA+ ++ MP P+ V+ G+LL++C H ++G A + ++
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 495 ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
+ GY ++++N+Y+A KW + R MR++G+ K G S +
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 212/462 (45%), Gaps = 9/462 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G ++FV + +I Y G + ++F + +D W+++I+ + NG +L
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M ++ P ++ AEL+ +G +HG V+++ ++ + S + Y
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN-TAVGASFVYFYS 172
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV---IPNEIT 197
KC L A VFD +V+WT +I+G++ G+ KM G PN T
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ + C + AL+ G+ LH F ++NG+ S + ++ Y K G+ A F +
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
++D+ +++I++ A++ ++E FD+F +M + G+ P+ + + L+ K + GK
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLG 376
H ++ + D+ + SL+ MY K + +LF ++ + WN M+ G +
Sbjct: 353 FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
+ELF +++ G+ + + + +CSH G + GK L H V L +
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL-HCYVVKTSLDLTISVV 471
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++DL + G L A ++ + NV+ + + A +H
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCE---ADTNVITWNAMIASYVH 510
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C +LE + +A + G++ ++ +A+ I Y G + VF + +D+ +
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+++I A+ F M G P+ T ++ CA+ +G ++H + K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 325 Q-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
G R+T + S V Y+KCG + +F DRD++ W +ISG G+ E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 384 LFVEMEAQGV---IPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
+M + G PN T +ACS+ G L+EG R H GL M
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMF 272
Query: 441 DLLSRAGLLDEA 452
S++G EA
Sbjct: 273 SFYSKSGNPSEA 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R+ E ++ + A+I MY + G LE +R+LFD KDAV W+ MI YG +G ++
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A+ L M + VKP+ ++++ ++ GK L ++ ++ + + +
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL--FLKMHQYDVKPNLKHYSC 674
Query: 135 LIDMYVKCKNLAYARSVFDG--FSGASIVSWTTMIAGYIHTNNLNEGIRL 182
L+D+ + NL A S FS ++ W T+++ + GIR+
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVI-WGTLLSSCMTHGEFEMGIRM 723
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
++LC ++ SLE + ++ I G+ + + + L+ YA G + + R+F T RDI
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+WN +I GD +L F M G P+ T + AC+ G H
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGT-FVHG 149
Query: 423 MVHDFGLVPKVEHYGC-MVDLLSRAGLLDEAQKLIIDMPMR-------------PNNVVL 468
+V G + G V S+ G L +A + +MP R N
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 469 GSLLAACKLH-----------KNVKLGEWAAGQFLSLESHKC--GYNV---------LMS 506
G L CK+H + ++ G A +L+ +C G+ V + S
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 507 NIYAAENKWGDVSDIRRAMRDAG 529
++++ +K G+ S+ + R+ G
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELG 292
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 292/554 (52%), Gaps = 4/554 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G H D +VC +++ MY + G + A +F +VDK W+ M+ Y N ALDL
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR V P + ++I + L GK++H + + QS + ++L+ +Y
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI--QSTSTIESALLTLYS 419
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE--GVIPNEITI 198
KC A VF +V+W ++I+G E +++F M+ + + P+ +
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
S+ C +EAL FG +H ++ G+ ++V + ++ ID+Y KCG A VF S+
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
++++ ++MIS Y++ N + D+F M GI P+ +++ S+LV + SL GK +
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y + GI DT LK +L+DMY KCG +F + ++ WN+MI G GD
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
AL LF EM+ G P+D+TF+ + AC+HSG ++EGK +F M D+G+ P +EHY
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MVDLL RAGLL+EA I MP+ ++ + LL+A + H NV+LG +A + L +E +
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
V + N+Y + + + M++ G+ K+PG S IEV+ + F G P
Sbjct: 780 GSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMK 839
Query: 559 RRIYEIVAEMREKL 572
I+ ++ ++ +
Sbjct: 840 AEIFNVLNRLKSNM 853
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 17/473 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD-------KDAVSWSTMIRNYGRNGLL 73
G+ D F+ +++ MY + G L++A Q+FD +D W++MI Y +
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKL--GKALHGYVMRNRNCGQSGVPL 131
E + R M V V+P ++ ++ V + + + GK +HG+++RN S L
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF--L 207
Query: 132 STSLIDMYVKCKNLAYARSVFDGFSGAS-IVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
T+LIDMY K A VF S +V W MI G+ + + L++ +
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V + + C E FG+ +H ++ G+ + T+ + MY KCG A
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VF + +K L I +AM++AYA+ + D+F M + P+ T+ +++ C+ G
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
GK +H+ + K+ I+ + ++++L+ +Y+KCG Y +F + ++D++ W +IS
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 371 GCAMLGDGEAALELFVEM--EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
G G + AL++F +M + + P+ AC+ L+ G ++ M+ G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-G 506
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNV 481
LV V ++DL S+ GL + A K+ M N+V + + +C N+
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE--NMVAWNSMISCYSRNNL 557
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 203/435 (46%), Gaps = 51/435 (11%)
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTSLIDMYVKCKNLAYARSVFDGF 155
S++ + L +L GK +HG V+ G P ++TSL++MYVKC L YA VFDG+
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVV---LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 156 SGAS-------IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
S + + W +MI GY EG+ F +M GV P+ + LS+V
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFS-LSIVVSVMCK 180
Query: 209 EA---LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMIC 264
E E GK +H F LRN + L TA IDMY K G A VF IE+K ++++
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ MI + + + D+++ + ++ + L C+++ + G+ IH + K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G+ D + TSL+ MY+KCG + +F+ D+ + +WN M++ A G +AL+L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGK----RLFHKMVH--------------- 425
F M + V+P+ T + CS GL GK LF + +
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 426 -----DFGLVPK------VEHYGCMVDLLSRAGLLDEAQKLIIDM-----PMRPNNVVLG 469
D LV K + +G ++ L + G EA K+ DM ++P++ ++
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 470 SLLAACKLHKNVKLG 484
S+ AC + ++ G
Sbjct: 481 SVTNACAGLEALRFG 495
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 11/236 (4%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G +VFV +++I +Y + G E A ++F M ++ V+W++MI Y RN L + ++D
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP----LSTS 134
L M + P +++ S++ + L GK+LHGY +R G+P L +
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR------LGIPSDTHLKNA 617
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LIDMYVKC YA ++F S+++W MI GY + + LF +M++ G P+
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSA 249
++T LSL+ C +E GK + F ++ GI ++ +D+ G+ G A
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 170 YIHTNNLNEGIRLFVKM-----------RREGVIP---NEITILSLVKECGTVEALEFGK 215
YI ++N GIR ++ + +G P + T SL+K C + L +GK
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD-------SIENKDLMICSAMI 268
+H + G +AT+ ++MY KCG A VFD + +D+ + ++MI
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL--EMGKWIHSYIDKQG 326
Y + E F +M G+RP+ ++ ++ + K G+ E GK IH ++ +
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGEAALELF 385
+ D+ LKT+L+DMY K G +R+F D+ ++++WNVMI G G E++L+L+
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC--MVDLL 443
+ + V +F GAL ACS S G+++ H V GL + Y C ++ +
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI-HCDVVKMGL--HNDPYVCTSLLSMY 317
Query: 444 SRAGLLDEAQKLI 456
S+ G++ EA+ +
Sbjct: 318 SKCGMVGEAETVF 330
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-- 354
T SLL C+ +L GK IH + G + D + TSLV+MY KCG +D ++F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 355 -----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+ + RD+ +WN MI G + + F M GV P+ + +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 410 SGLL--QEGKRLFHKMVHDFGLVPKVEH----YGCMVDLLSRAGLLDEAQKLIIDMPMRP 463
G +EGK+ +H F L ++ ++D+ + GL +A ++ +++ +
Sbjct: 181 EGNFRREEGKQ-----IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 464 NNVV 467
N V+
Sbjct: 236 NVVL 239
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 287/539 (53%), Gaps = 40/539 (7%)
Query: 60 WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM 119
++ M+++ + L L ++R + P + ++ L + G+ +HGY +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 120 RNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
+ S V S SL+ MY + VFD +VSW +I+ Y+ +
Sbjct: 74 KAGLEFDSYV--SNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 180 IRLFVKMRREGVIP-NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
I +F +M +E + +E TI+S + C ++ LE G+ ++ F + +SV + A +D
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVD 190
Query: 239 MYGKCGDFRSARYVFDSIENK-------------------------------DLMICSAM 267
M+ KCG AR VFDS+ +K D+++ +AM
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
++ Y Q N DE ++F M GIRP+ +VSLL CA+ G+LE GKWIH YI++ +
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
D + T+LVDMYAKCG I+T +F +RD W +I G AM G AL+L+ E
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
ME GV + ITF+ L AC+H G + EG+++FH M + PK EH C++DLL RAG
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 448 LLDEAQKLIIDMPMRPNNVVLG---SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
LLDEA++LI M + ++ SLL+A + + NVK+ E A + +E + L
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 505 MSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR--EHPETRRI 561
++++YA+ N+W DV+++RR M+D GI K PG SSIE++G HEFI+GD HP+ I
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 186/371 (50%), Gaps = 36/371 (9%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ + G D +V N+++ MY +G +E ++FD+M +D VSW+ +I +Y NG ++
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 76 ALDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A+ + + M + + +K E ++S + + L +L++G+ ++ +V+ + V + +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF---EMSVRIGNA 187
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT--------------------- 173
L+DM+ KC L AR+VFD ++ WT+M+ GY+ T
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 174 ----------NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
N +E + LF M+ G+ P+ ++SL+ C ALE GK +H +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
N +T+ V+ TA +DMY KCG +A VF I+ +D +++I A D+
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI-HSYIDKQGIKRDTKLKTSLVDMYA 342
+ +M + G+R + IT V++L C G + G+ I HS ++ ++ ++ + L+D+
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 343 KCGDIDTTYRL 353
+ G +D L
Sbjct: 428 RAGLLDEAEEL 438
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 160/336 (47%), Gaps = 34/336 (10%)
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
S++ + M+ + + + LF ++R +G+ P+ T+ ++K G + + G+ +H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+ ++ G+ ++ + + MY G VFD + +D++ + +IS+Y +
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 279 EVFDIFVQMN-DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
+ +F +M+ + ++ +E T+VS L C+ +LE+G+ I+ ++ + + ++ +L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNAL 188
Query: 338 VDMYAKCGDIDTTYRLFAAATD-------------------------------RDILMWN 366
VDM+ KCG +D +F + D +D+++W
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
M++G + ALELF M+ G+ P++ + L C+ +G L++GK + + +
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
V KV +VD+ ++ G ++ A ++ ++ R
Sbjct: 309 RVTVDKVVGTA-LVDMYAKCGCIETALEVFYEIKER 343
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 21/283 (7%)
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
++ L++ + M+ + A +V +F ++ G+ P+ T+ +L + + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ +H Y K G++ D+ + SL+ MYA G I+ T+++F RD++ WN +IS
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 376 GDGEAALELFVEMEAQGVIPNDI-TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G E A+ +F M + + D T + L ACS L+ G+R++ +V +F + ++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF--- 491
+ +VD+ + G LD+A + + D MR NV K ++ G + G+
Sbjct: 186 N--ALVDMFCKCGCLDKA-RAVFD-SMRDKNV---------KCWTSMVFGYVSTGRIDEA 232
Query: 492 -LSLESHKCGYNVL---MSNIYAAENKWGDVSDIRRAMRDAGI 530
+ E VL M N Y N++ + ++ R M+ AGI
Sbjct: 233 RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 303/555 (54%), Gaps = 16/555 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD-EAL 77
+ G D+ V N+ I MY GS AR++FD+M KD +SW++++ + G EA+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
+ RDM V+ ++ S+I DLKL + +HG ++ +S + + L+
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY--ESLLEVGNILMS 319
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
Y KC L +SVF S ++VSWTTMI ++N ++ + +F+ MR +GV PNE+T
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ L+ E ++ G +H ++ G + +FI +Y K A+ F+ I
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL--VLCAKAGSLEMG 315
++++ +AMIS +AQ E +F+ PNE T S+L + A+ S++ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
+ H+++ K G+ + ++L+DMYAK G+ID + ++F + ++ +W +IS +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
GD E + LF +M + V P+ +TF+ L AC+ G++ +G +F+ M+ + L P EH
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
Y CMVD+L RAG L EA++L+ ++P P +L S+L +C+LH NVK+G A + ++
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 673
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG-----SVHEFIM 550
G V M NIYA + +W ++IR+AMR +SKE G S I+V ++ F
Sbjct: 674 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSS 733
Query: 551 GDREHPETRRIYEIV 565
GD+ HP++ IY +V
Sbjct: 734 GDKSHPKSDEIYRMV 748
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 16/466 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F +GF V V NA++ MY + G + A +F+ +VD D VSW+T++ + N +
Sbjct: 101 FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI--- 157
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL+ + M+ A V + + LG L V++ +S + + S
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL--ESDLVVGNSF 215
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN-EGIRLFVKMRREGVIPN 194
I MY + + AR VFD S ++SW ++++G E + +F M REGV +
Sbjct: 216 ITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
++ S++ C L+ + +H ++ G + + + Y KCG + + VF
Sbjct: 276 HVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH 335
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ ++++ + MIS+ D+ IF+ M G+ PNE+T V L+ ++
Sbjct: 336 QMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G IH K G + + S + +YAK ++ + F T R+I+ WN MISG A
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSG--LLQEGKRLFHKMVHDFGLVPK 432
G AL++F+ A+ +PN+ TF L A + + +++G+R H + GL
Sbjct: 451 NGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRC-HAHLLKLGLNSC 508
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++D+ ++ G +DE++K+ +M + N V S+++A H
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSH 553
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 176/357 (49%), Gaps = 12/357 (3%)
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
DLK G +HG+ + S V +S +++ MY K A +F+ +VSW T+
Sbjct: 91 DLKRGCQIHGF--STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTI 148
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
++G+ ++ + V+M+ GV+ + T + + C E G L + ++ G+
Sbjct: 149 LSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID-EVFDIFV 285
+V+ +FI MY + G FR AR VFD + KD++ ++++S +Q E IF
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M G+ + ++ S++ C L++ + IH K+G + ++ L+ Y+KCG
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
++ +F ++R+++ W MIS + + A+ +F+ M GV PN++TF+G +
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
A + ++EG ++ H + G V + + L ++ L++A+K D+ R
Sbjct: 381 AVKCNEQIKEGLKI-HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 8/245 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
C + GF + V N+ I +Y + +LE A++ F+ + ++ +SW+ MI + +NG E
Sbjct: 397 LCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHE 456
Query: 76 ALDLLRDMRVARVKPSEIAMISIIH--VFAELVDLKLGKALHGYVMRNRNCGQSGVP-LS 132
AL + A P+E S+++ FAE + +K G+ H ++++ G + P +S
Sbjct: 457 ALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK---LGLNSCPVVS 512
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
++L+DMY K N+ + VF+ S + WT++I+ Y + + LF KM +E V
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 193 PNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
P+ +T LS++ C ++ G ++ + + S + +DM G+ G + A
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEE 632
Query: 252 VFDSI 256
+ +
Sbjct: 633 LMSEV 637
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 246 FRSARYVFDSIENKDLMIC-SAMISAYAQTNCIDEVFDIF---VQMNDCGIRPNEITMVS 301
+R A +FD ++ + IS + N IF +Q+ G +E+T+
Sbjct: 24 YRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC- 82
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L L A G L+ G IH + G + +++ MY K G D +F D D
Sbjct: 83 -LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
++ WN ++SG D + AL V M++ GV+ + T+ AL C S G +L
Sbjct: 142 VVSWNTILSG---FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
+V GL + + + SR+G A+++ +M +
Sbjct: 199 TVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 303/565 (53%), Gaps = 6/565 (1%)
Query: 23 HRDVFVC-NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
HR+ V N+++ +Y + G L A +LFD+M +D +S + + + RN + LL+
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKL-GKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R+ + A ++I+ + + L K +H + + + + LI Y
Sbjct: 146 --RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGY--DKEISVGNKLITSYF 201
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC R VFDG S ++++ T +I+G I +G+RLF MRR V PN +T LS
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+ C + + G+ +HA + GI + + +A +DMY KCG A +F+S D
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVD 321
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + ++ AQ +E F++M G+ + + ++L + SL +GK +HS
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+ K+ +T + L++MY+KCGD+ + +F R+ + WN MI+ A G G A
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA 441
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
AL+L+ EM V P D+TF+ L ACSH GL+ +G+ L ++M G+ P+ EHY C++
Sbjct: 442 ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCII 501
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
D+L RAGLL EA+ I +P++P+ + +LL AC H + ++GE+AA Q
Sbjct: 502 DMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSS 561
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR 560
++L++NIY++ KW + + + M+ G++KE G+SSIE+ H F++ D+ HP+
Sbjct: 562 AHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEA 621
Query: 561 IYEIVAEMREKLDNVGYTPDISAVL 585
IY++++ + + + GY PD +L
Sbjct: 622 IYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G ++ + +A++ MY + GS+E A +F+ + D VS + ++ +NG +EA+
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M A V+ + +++ V L LGK LH V++ + G + V + LI+MY
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV--NNGLINMYS 403
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC +L +++VF + VSW +MIA + + ++L+ +M V P ++T LS
Sbjct: 404 KCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLS 463
Query: 201 LVKECGTVEALEFGK-LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
L+ C V ++ G+ LL+ +GI T IDM G+ G + A+ DS+ K
Sbjct: 464 LLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK 523
Query: 260 -DLMICSAMISA 270
D I A++ A
Sbjct: 524 PDCKIWQALLGA 535
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 293/526 (55%), Gaps = 14/526 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSW-STMIRNYGRNGLLDEAL 77
++GF+ D V A+I MY + G ++ + Q+F+ + D + + MI ++ ++ +A+
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAI 438
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL----ST 133
L M ++ E ++ S++ V L L LGK +HGY ++ SG+ L +
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK------SGLVLDLTVGS 489
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
SL +Y KC +L + +F G W +MI+G+ L E I LF +M +G P
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+E T+ +++ C + +L GK +H +TLR GI + L +A ++MY KCG + AR V+
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
D + D + CS++IS Y+Q I + F +F M G + + S+L A +
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
+G +H+YI K G+ + + +SL+ MY+K G ID + F+ D++ W +I+ A
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
G AL+++ M+ +G P+ +TF+G L ACSH GL++E + MV D+G+ P+
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
HY CMVD L R+G L EA+ I +M ++P+ +V G+LLAACK+H V+LG+ AA + +
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
LE G + +SNI A +W +V + R+ M+ G+ KEPG SS+
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 230/472 (48%), Gaps = 12/472 (2%)
Query: 17 CCEN---GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
CC G+ V +A+I ++ + E A ++F + + W+T+I RN
Sbjct: 173 CCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
DL +M V KP S++ A L L+ GK + V++ CG V + T
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK---CGAEDVFVCT 289
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
+++D+Y KC ++A A VF S+VSWT M++GY +N+ + +F +MR GV
Sbjct: 290 AIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
N T+ S++ CG + +HA+ ++G + +A A I MY K GD + VF
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 254 DSIEN-KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
+ +++ + I + MI++++Q+ + +F +M G+R +E ++ SLL + L
Sbjct: 410 EDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCL 466
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
+GK +H Y K G+ D + +SL +Y+KCG ++ +Y+LF +D W MISG
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
G A+ LF EM G P++ T L CS L GK + H G+
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKG 585
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
++ +V++ S+ G L A+++ +P + V SL++ H ++ G
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 213/454 (46%), Gaps = 34/454 (7%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DVF+ +++ Y GS+ A +LFD + D VS + MI Y ++ L +E+L M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 85 VARVKPSEIAMISIIH--------VFAELV---DLKLGKALHGYVMRNRNCGQSGVPLST 133
+ +EI+ S+I +F+ELV +K+G + V +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV-------------ES 189
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
+LID++ K A VF A++ W T+IAG + N LF +M P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+ T S++ C ++E L FGK++ A ++ G V + TA +D+Y KCG A VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
I N ++ + M+S Y ++N +IF +M G+ N T+ S++ C + +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD---RDILMWNVMIS 370
+H+++ K G D+ + +L+ MY+K GDID + ++F D ++I+ NVMI+
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
+ A+ LF M +G+ ++ + L L GK++ H GLV
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQV-HGYTLKSGLV 482
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
+ + L S+ G L+E+ KL +P + N
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 7/379 (1%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++G D+ V +++ +Y + GSLE + +LF + KD W++MI + G L E
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLRE 534
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L +M P E + +++ V + L GK +HGY +R G+ L ++L
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI--DKGMDLGSAL 592
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
++MY KC +L AR V+D VS +++I+GY + +G LF M G +
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
I S++K + G +HA+ + G+ + ++ + MY K G F
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
I DL+ +A+I++YAQ +E ++ M + G +P+++T V +L C+ G +E
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 316 KW-IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAA-TDRDILMWNVMISGCA 373
+ ++S + GI+ + + +VD + G + D L+W +++ C
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Query: 374 MLGD---GEAALELFVEME 389
+ G+ G+ A + +E+E
Sbjct: 833 IHGEVELGKVAAKKAIELE 851
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 7/385 (1%)
Query: 103 AELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVS 162
+ L +L+ K L +++R R V L+ SL+ Y ++A A +FD +VS
Sbjct: 59 SRLCNLRTTKILQAHLLR-RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVS 117
Query: 163 WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTL 222
MI+GY E +R F KM G NEI+ S++ C ++A F +L+ T+
Sbjct: 118 CNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTI 177
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFD 282
+ G V+ +A ID++ K F A VF + ++ + +I+ + VFD
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD 237
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+F +M +P+ T S+L CA L GK + + + K G + D + T++VD+YA
Sbjct: 238 LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYA 296
Query: 343 KCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIG 402
KCG + +F+ + ++ W VM+SG D +ALE+F EM GV N+ T
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP-- 460
+ AC ++ E ++ H V G ++ + S++G +D ++++ D+
Sbjct: 357 VISACGRPSMVCEASQV-HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 461 MRPN--NVVLGSLLAACKLHKNVKL 483
R N NV++ S + K K ++L
Sbjct: 416 QRQNIVNVMITSFSQSKKPGKAIRL 440
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 303/548 (55%), Gaps = 4/548 (0%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F D +CN+++ MY + G L + ++F+K+ K+AVSW+ MI +Y R ++AL
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
+M + ++P+ + + S++ + ++ GK++HG+ +R R + LS +L+++Y +
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR-RELDPNYESLSLALVELYAE 351
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
C L+ +V S +IV+W ++I+ Y H + + + LF +M + + P+ T+ S
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ C + GK +H +R ++ V + IDMY K G SA VF+ I+++ +
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ ++M+ ++Q E +F M + NE+T ++++ C+ GSLE GKW+H
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
+ G+K D T+L+DMYAKCGD++ +F A + R I+ W+ MI+ M G +A
Sbjct: 531 LIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSA 589
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
+ F +M G PN++ F+ L AC HSG ++EGK F+ M FG+ P EH+ C +D
Sbjct: 590 ISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFID 648
Query: 442 LLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY 501
LLSR+G L EA + I +MP + V GSL+ C++H+ + + + + + GY
Sbjct: 649 LLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGY 708
Query: 502 NVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRI 561
L+SNIYA E +W + +R AM+ + + K PG S+IE++ V F G+ +T I
Sbjct: 709 YTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEI 768
Query: 562 YEIVAEMR 569
Y + ++
Sbjct: 769 YRFLGNLQ 776
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/618 (25%), Positives = 303/618 (49%), Gaps = 67/618 (10%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G D + +++ MYG+ G+L A ++FD M +D V+WST++ + NG + +AL
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ + M V+P + MIS++ AEL L++ +++HG + R L SL+ M
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI--TRKMFDLDETLCNSLLTM 246
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC +L + +F+ + + VSWT MI+ Y + +R F +M + G+ PN +T+
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISV-VLATAFIDMYGKCGDFRSARYVFDSIE 257
S++ CG + + GK +H F +R + + L+ A +++Y +CG V +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+++++ +++IS YA + + +F QM I+P+ T+ S + C AG + +GK
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
IH ++ + + D ++ SL+DMY+K G +D+ +F R ++ WN M+ G + G+
Sbjct: 427 IHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
A+ LF M + N++TF+ ++ACS G L++GK + HK++ + +
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGLKDLFTDT 543
Query: 438 CMVDLLSRAGLLDEAQKL----------------------------------IIDMPMRP 463
++D+ ++ G L+ A+ + +++ +P
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 464 NNVVLGSLLAACKLHKNVKLGEW------AAGQFLSLESHKCGYNVLMSNIYAAENKWGD 517
N VV ++L+AC +V+ G++ + G + E C ++L ++ GD
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLL--------SRSGD 655
Query: 518 VSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKL-DNVG 576
+ + R +++ P ++ V GS+ + G R H + I I ++ + + D+ G
Sbjct: 656 LKEAYRTIKEM-----PFLADASVWGSL---VNGCRIHQKMDIIKAIKNDLSDIVTDDTG 707
Query: 577 YTPDISAVLMNIDGEEKE 594
Y +L NI EE E
Sbjct: 708 YY----TLLSNIYAEEGE 721
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 230/466 (49%), Gaps = 25/466 (5%)
Query: 3 SHTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWST 62
+H ++ R R RD +I Y +GS + +R +F+ D+ +
Sbjct: 22 AHLLVTGRLR-----------RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 63 MIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD-LKLGKALHGYVMRN 121
+I+ LLD A+DL + + S+ S++ A + L +G +HG +++
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKG 130
Query: 122 RNCGQSGVP----LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN 177
GV + TSL+ MY + NL+ A VFDG +V+W+T+++ + +
Sbjct: 131 ------GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184
Query: 178 EGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFI 237
+ +R+F M +GV P+ +T++S+V+ C + L + +H R + L + +
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 238 DMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEI 297
MY KCGD S+ +F+ I K+ + +AMIS+Y + ++ F +M GI PN +
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304
Query: 298 TMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK-LKTSLVDMYAKCGDIDTTYRLFAA 356
T+ S+L C G + GK +H + ++ + + + L +LV++YA+CG + +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 357 ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEG 416
+DR+I+ WN +IS A G AL LF +M Q + P+ T ++ AC ++GL+ G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 417 KRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
K++ ++ V++ ++D+ S++G +D A + + R
Sbjct: 425 KQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHR 468
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 204/427 (47%), Gaps = 18/427 (4%)
Query: 95 MISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDG 154
M + +F L+L LH +++ + +P+ T LI+ Y + +R VF+
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPV-TKLIESYAFMGSPDSSRLVFEA 59
Query: 155 FSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC-GTVEALEF 213
F + +I + + L+ I L+ ++ E ++ S+++ C G+ E L
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQ 273
G +H ++ G+ V+ T+ + MYG+ G+ A VFD + +DL+ S ++S+ +
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
+ + +F M D G+ P+ +TM+S++ CA+ G L + + +H I ++ D L
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 334 KTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGV 393
SL+ MY+KCGD+ ++ R+F ++ + W MIS E AL F EM G+
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 394 IPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG----LVPKVEHYG-CMVDLLSRAGL 448
PN +T L +C GL++EGK VH F L P E +V+L + G
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKS-----VHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 449 LDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN--VLMS 506
L + + ++ + R N+V + L + H+ + + A G F + + + + L S
Sbjct: 355 LSDCETVLRVVSDR--NIVAWNSLISLYAHRGMVI--QALGLFRQMVTQRIKPDAFTLAS 410
Query: 507 NIYAAEN 513
+I A EN
Sbjct: 411 SISACEN 417
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 264/457 (57%), Gaps = 35/457 (7%)
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
YA VF S ++ +T MI G++ + +G+ L+ +M V+P+ I S++K C
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD 138
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
L+ + +HA L+ G S + +++YGK G+ +A+ +FD + ++D + +
Sbjct: 139 ----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 267 MISAYAQTNCIDEVFDIF--VQMNDC-----------------------------GIRPN 295
MI+ Y++ I E ++F V++ D + N
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
E T V +L C+ G+LE+G+W+HS+++ Q ++ + +L++MY++CGDI+ R+F
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQE 415
D+D++ +N MISG AM G A+ F +M +G PN +T + L ACSH GLL
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 416 GKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC 475
G +F+ M F + P++EHYGC+VDLL R G L+EA + I ++P+ P++++LG+LL+AC
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 476 KLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPG 535
K+H N++LGE A + E+ G VL+SN+YA+ KW + ++IR +MRD+GI KEPG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 536 VSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKL 572
S+IEV+ +HEF++GD HP IY+ + E+ L
Sbjct: 495 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRIL 531
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 43/437 (9%)
Query: 22 FH-RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
FH +D FV +I + + S+++A +F + + + ++ MI + +G + + L
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR-----NRNCG--------QS 127
M V P + S++ + DLK+ + +H V++ +R+ G +S
Sbjct: 116 HRMIHNSVLPDNYVITSVL----KACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKS 171
Query: 128 G-----------VP-----LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
G +P +T +I+ Y +C + A +F V WT MI G +
Sbjct: 172 GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLV 231
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
+N+ + LF +M+ E V NE T + ++ C + ALE G+ +H+F + +S
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
+ A I+MY +CGD AR VF + +KD++ + MIS A E + F M + G
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTT 350
RPN++T+V+LL C+ G L++G + + + + ++ + +VD+ + G ++
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 351 YRLFA-AATDRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIPNDITFIGALKA 406
YR + D +M ++S C + G+ GE + E E P+ T++
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN----PDSGTYVLLSNL 467
Query: 407 CSHSGLLQEGKRLFHKM 423
+ SG +E + M
Sbjct: 468 YASSGKWKESTEIRESM 484
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 299/568 (52%), Gaps = 13/568 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NG + VF+ N +I MY + G L+ A LFD+ ++D VSW+++I Y R G +E L+L
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVD---LKLGKALHGYVMRNRNCG-QSGVPLSTSL 135
L M + + A+ S++ ++ ++ G A+H Y + G + + + T+L
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK---LGMEFDIVVRTAL 293
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL-----NEGIRLFVKMRREG 190
+DMY K +L A +F ++V++ MI+G++ + + +E +LF+ M+R G
Sbjct: 294 LDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ P+ T ++K C + LE+G+ +HA +N + +A I++Y G
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
F S +D+ ++MI + Q ++ FD+F Q+ IRP E T+ ++ CA
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
+L G+ I Y K GI T +KTS + MYAK G++ ++F + D+ ++ MIS
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
A G AL +F M+ G+ PN F+G L AC H GL+ +G + F M +D+ +
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRIN 593
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ 490
P +H+ C+VDLL R G L +A+ LI+ + + V +LL++C+++K+ +G+ A +
Sbjct: 594 PNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAER 653
Query: 491 FLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIM 550
+ LE G VL+ NIY ++R MRD G+ KEP +S I + H F +
Sbjct: 654 LMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAV 713
Query: 551 GDREHPETRRIYEIVAEMREKLDNVGYT 578
D HP ++ IY ++ M + +D V YT
Sbjct: 714 ADLSHPSSQMIYTMLETM-DNVDFVDYT 740
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 232/486 (47%), Gaps = 50/486 (10%)
Query: 35 MYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIA 94
MY + L FARQLFD+M +++ +S++++I Y + G ++A++L + R A +K +
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 95 MISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDG 154
+ E DL LG+ LHG V+ N Q V L LIDMY KC L A S+FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQ--VFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 155 FSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC------GTV 208
VSW ++I+GY+ E + L KM R+G+ + S++K C G +
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
E G +H +T + G+ +V+ TA +DMY K G + A +F + +K+++ +AMI
Sbjct: 269 EK---GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 269 SAYAQTNCI-----DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
S + Q + I E F +F+ M G+ P+ T +L C+ A +LE G+ IH+ I
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K + D + ++L+++YA G + + FA+ + +DI W MI E+A +
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL----FHKMVHDFGLV--------- 430
LF ++ + + P + T + AC+ L G+++ + F V
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 431 -----------------PKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPN-NVVLG 469
P V Y M+ L++ G +EA + M ++PN LG
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 470 SLLAAC 475
L+A C
Sbjct: 566 VLIACC 571
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 171/318 (53%), Gaps = 10/318 (3%)
Query: 110 LGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAG 169
LGK HG+++++ + L +L++MY KC+ L +AR +FD +I+S+ ++I+G
Sbjct: 65 LGKLAHGHMIKSSL--NPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 170 YIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS 229
Y + + LF++ R + ++ T + CG L+ G+LLH + NG++
Sbjct: 123 YTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
V L IDMY KCG A +FD + +D + +++IS Y + +E ++ +M+
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 290 CGIRPNEITMVSLLVLCA---KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
G+ + S+L C G +E G IH Y K G++ D ++T+L+DMYAK G
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGD-----GEAALELFVEMEAQGVIPNDITFI 401
+ +LF+ ++++ +N MISG + + A +LF++M+ +G+ P+ TF
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 402 GALKACSHSGLLQEGKRL 419
LKACS + L+ G+++
Sbjct: 363 VVLKACSAAKTLEYGRQI 380
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 213 FGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYA 272
GKL H +++ + + L ++MY KC + AR +FD + ++++ +++IS Y
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
Q ++ ++F++ + ++ ++ T L C + L++G+ +H + G+ +
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 333 LKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG 392
L L+DMY+KCG +D LF +RD + WN +ISG +G E L L +M G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 393 VIPNDITFIGALKACS---HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
+ LKAC + G +++G + H G+ + ++D+ ++ G L
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 450 DEAQKLIIDMPMRPNNVV 467
EA KL MP + NVV
Sbjct: 304 KEAIKLFSLMPSK--NVV 319
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 18 CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
C+N F D F+ +A+I +Y +GS E Q F +D SW++MI + +N L+ A
Sbjct: 385 CKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAF 444
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV----PLST 133
DL R + + ++P E + ++ A+ L G+ + GY ++ SG+ + T
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK------SGIDAFTSVKT 498
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
S I MY K N+ A VF + +++ MI+ + NE + +F M+ G+ P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 194 NEITILSLVKEC 205
N+ L ++ C
Sbjct: 559 NQQAFLGVLIAC 570
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L AK+GS+ +GK H ++ K + L +L++MY KC ++ +LF +R+
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
I+ +N +ISG +G E A+ELF+E + + T+ GAL C L G+ L H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-LLH 171
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
+V GL +V ++D+ S+ G LD+A L
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 288/538 (53%), Gaps = 4/538 (0%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARV- 88
NA+I MY + A ++F + KD +SWS++I + + G EAL L++M V
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYA 148
P+E S + + L+ G +HG +++ G + SL DMY +C L A
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA--GCSLCDMYARCGFLNSA 324
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
R VFD SW +IAG + +E + +F +MR G IP+ I++ SL+
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAM 267
AL G +H++ ++ G + + + + MY C D +F+ N D + + +
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTI 444
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
++A Q E+ +F M P+ ITM +LL C + SL++G +H Y K G+
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL 504
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
+ +K L+DMYAKCG + R+F + +RD++ W+ +I G A G GE AL LF E
Sbjct: 505 APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
M++ G+ PN +TF+G L ACSH GL++EG +L+ M + G+ P EH C+VDLL+RAG
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 448 LLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSN 507
L+EA++ I +M + P+ VV +LL+ACK NV L + AA L ++ +VL+ +
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCS 684
Query: 508 IYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
++A+ W + + +R +M+ + K PG S IE+ +H F D HPE IY ++
Sbjct: 685 MHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 214/440 (48%), Gaps = 5/440 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D + N I+ MYG+ GSL AR++FD M +++ VS++++I Y +NG EA+ L M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+ P + A SII A D+ LGK LH V++ + S + +LI MYV+
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES--SSHLIAQNALIAMYVRFNQ 218
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSLVK 203
++ A VF G ++SW+++IAG+ E + +M GV PNE S +K
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C ++ ++G +H +++ + + + + DMY +CG SAR VFD IE D
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+ +I+ A DE +F QM G P+ I++ SLL K +L G IHSYI
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEAAL 382
K G D + SL+ MY C D+ + LF + D + WN +++ C L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
LF M P+ IT L+ C L+ G ++ H GL P+ ++D+
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLIDM 517
Query: 443 LSRAGLLDEAQKLIIDMPMR 462
++ G L +A+++ M R
Sbjct: 518 YAKCGSLGQARRIFDSMDNR 537
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 196/416 (47%), Gaps = 8/416 (1%)
Query: 66 NYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG 125
N+ R L EA D + +++ IS+I + L G+ +H +++ N NC
Sbjct: 45 NFYREAL--EAFDFAQKNSSFKIRLR--TYISLICACSSSRSLAQGRKIHDHIL-NSNCK 99
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
+ L+ ++ MY KC +L AR VFD ++VS+T++I GY E IRL++K
Sbjct: 100 YDTI-LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 186 MRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
M +E ++P++ S++K C + + GK LHA ++ + ++ A I MY +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI-RPNEITMVSLLV 304
A VF I KDL+ S++I+ ++Q E +M G+ PNE S L
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
C+ + G IH K + + SL DMYA+CG +++ R+F D
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
WNV+I+G A G + A+ +F +M + G IP+ I+ L A + L +G ++ H +
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI-HSYI 397
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
+G + + ++ + + L L D ++V ++L AC H+
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 8/313 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDL 79
GF D+ VCN+++ MY L LF+ + D+VSW+T++ ++ E L L
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRL 460
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ M V+ +P I M +++ E+ LKLG +H Y ++ + + LIDMY
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI--KNGLIDMY 518
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC +L AR +FD +VSW+T+I GY + E + LF +M+ G+ PN +T +
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 200 SLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE- 257
++ C V +E G KL +GI+ + + +D+ + G A D ++
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP-NEITMVSLLVLCAKAGSLEMGK 316
D+++ ++SA + N I P N V L + A +G+ E
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQK--AAENILKIDPFNSTAHVLLCSMHASSGNWENAA 696
Query: 317 WIHSYIDKQGIKR 329
+ S + K +K+
Sbjct: 697 LLRSSMKKHDVKK 709
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 7 ISARTRGARFCC---ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTM 63
IS+ G++ C + G + F+ N +I MY + GSL AR++FD M ++D VSWST+
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 64 IRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII----HVFAELVDLKLGKAL---HG 116
I Y ++G +EAL L ++M+ A ++P+ + + ++ HV LKL + HG
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAG 169
+C + ++D+ + L A D +V W T+++
Sbjct: 606 ISPTKEHC--------SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 298/576 (51%), Gaps = 38/576 (6%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM-R 84
VFVCN+++ Y VG +E A LF +M KD VSW+ +I Y N +A L ++
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
V P + +ISI+ V A+L DL GK +H Y++R+ + + +LI Y + +
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED-TSVGNALISFYARFGD 381
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ A F S I+SW ++ + + + + L + E + + +TILSL+K
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 205 CGTVEALEFGKLLHAFTLRNGI---TISVVLATAFIDMYGKCGDFR-------------- 247
C V+ + K +H ++++ G+ L A +D Y KCG+
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501
Query: 248 ------------------SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
A+ +F + DL S M+ YA++ C +E +F ++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
G+RPN +T+++LL +CA+ SL + + H YI + G+ D +LK +L+D+YAKCG +
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKH 620
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
Y +F + RD++M+ M++G A+ G G+ AL ++ M + P+ + L AC H
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCH 680
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
+GL+Q+G +++ + G+ P +E Y C VDL++R G LD+A + MP+ PN + G
Sbjct: 681 AGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWG 740
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
+LL AC + + LG A L ES G +VL+SN+YAA+ KW V ++R M+
Sbjct: 741 TLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKE 800
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
+ K G S +EV+G + F+ GD HP I+++V
Sbjct: 801 MKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLV 836
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 235/499 (47%), Gaps = 45/499 (9%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSL-EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
G +D V NA++ MY + G + A FD + DKD VSW+ +I + N ++ +A
Sbjct: 152 GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRS 211
Query: 80 LRDMRVARVKPSEIAMISIIHVFAEL---VDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
M +P+ + +++ V A + + + G+ +H YV++ R+ Q+ V + SL+
Sbjct: 212 FCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ-RSWLQTHVFVCNSLV 270
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG-VIPNE 195
Y++ + A S+F +VSW +IAGY + +LF + +G V P+
Sbjct: 271 SFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDS 330
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFD 254
+TI+S++ C + L GK +H++ LR+ + + A I Y + GD +A + F
Sbjct: 331 VTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFS 390
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ KD++ +A++ A+A + + ++ + + I + +T++SLL C +
Sbjct: 391 LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGK 450
Query: 315 GKWIHSYIDKQGIKRD---TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM-WNVMIS 370
K +H Y K G+ D KL +L+D YAKCG+++ +++F ++R L+ +N ++S
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 371 GCAMLGDGEAALELFVEM-------------------------------EAQGVIPNDIT 399
G G + A LF EM +A+G+ PN +T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+ L C+ L ++ ++ G + + G ++D+ ++ G L A +
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYIIR--GGLGDIRLKGTLLDVYAKCGSLKHAYS-VFQS 627
Query: 460 PMRPNNVVLGSLLAACKLH 478
R + V+ +++A +H
Sbjct: 628 DARRDLVMFTAMVAGYAVH 646
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 222/463 (47%), Gaps = 27/463 (5%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNY----GRNGLLDEALDLLRDM 83
V +++ MY + ++ +++F +M D V W+ ++ GR E + + M
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR-----ETMRFFKAM 112
Query: 84 RVA-RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
A KPS + ++ + L D GK++H Y+++ + + +L+ MY K
Sbjct: 113 HFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL--EKDTLVGNALVSMYAKF 170
Query: 143 KNL-AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+ A + FDG + +VSW +IAG+ N + + R F M +E PN TI ++
Sbjct: 171 GFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANV 230
Query: 202 VKECGTVE---ALEFGKLLHAFTL-RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ C +++ A G+ +H++ + R+ + V + + + Y + G A +F +
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG 290
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMGK 316
+KDL+ + +I+ YA + F +F + G + P+ +T++S+L +CA+ L GK
Sbjct: 291 SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Query: 317 WIHSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
IHSYI + + DT + +L+ YA+ GD Y F+ + +DI+ WN ++ A
Sbjct: 351 EIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADS 410
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHS---GLLQE--GKRLFHKMVHDFGLV 430
L L + + + + +T + LK C + G ++E G + ++HD
Sbjct: 411 PKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHD-EEE 469
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
PK+ + ++D ++ G ++ A K+ + + R V SLL+
Sbjct: 470 PKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 174/383 (45%), Gaps = 36/383 (9%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D V NA+I Y G A F M KD +SW+ ++ + + + L+LL +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTSLIDMYVKCK 143
+ + ++S++ + + K +HGY ++ P L +L+D Y KC
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCG 484
Query: 144 NLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNN--------------------------- 175
N+ YA +F G S ++VS+ ++++GY+++ +
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 176 ----LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
NE I +F +++ G+ PN +TI++L+ C + +L + H + +R G+ +
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIR 603
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
L +D+Y KCG + A VF S +DL++ +AM++ YA E I+ M +
Sbjct: 604 LKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN 663
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTT 350
I+P+ + + ++L C AG ++ G I+ I G+K + VD+ A+ G +D
Sbjct: 664 IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDA 723
Query: 351 YRLFAA-ATDRDILMWNVMISGC 372
Y + + +W ++ C
Sbjct: 724 YSFVTQMPVEPNANIWGTLLRAC 746
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 170/360 (47%), Gaps = 10/360 (2%)
Query: 95 MISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDG 154
+ ++ A + DL G+ALHG V + + S V S S+++MY KC+ + + +F
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV--SKSVLNMYAKCRRMDDCQKMFRQ 81
Query: 155 FSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR-REGVIPNEITILSLVKECGTVEALEF 213
V W ++ G + + E +R F M + P+ +T ++ C +
Sbjct: 82 MDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCG-DFRSARYVFDSIENKDLMICSAMISAYA 272
GK +H++ ++ G+ ++ A + MY K G F A FD I +KD++ +A+I+ ++
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA---KAGSLEMGKWIHSY-IDKQGIK 328
+ N + + F F M PN T+ ++L +CA K + G+ IHSY + + ++
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+ SLV Y + G I+ LF +D++ WNV+I+G A + A +LF +
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 389 EAQG-VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
+G V P+ +T I L C+ L GK + ++ L+ ++ +R G
Sbjct: 321 VHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFG 380
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 144/317 (45%), Gaps = 17/317 (5%)
Query: 180 IRLFVKMRR--EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFI 237
+R FV+ R G + L +VK C +V L G+ LH + G ++ + +
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 238 DMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNE 296
+MY KC + +F +++ D ++ + +++ + +C E F M+ +P+
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSS 122
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI-DTTYRLFA 355
+T +L LC + G GK +HSYI K G+++DT + +LV MYAK G I Y F
Sbjct: 123 VTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD 182
Query: 356 AATDRDILMWNVMISGCA---MLGDGEAALELFVEMEAQGVIPNDITFIGALKACS---H 409
D+D++ WN +I+G + M+ D A F M + PN T L C+
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMAD---AFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNV 466
+ + G+++ +V L V +V R G ++EA L M + NV
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 467 VLGSLLAACKLHKNVKL 483
V+ + C+ K +L
Sbjct: 300 VIAGYASNCEWFKAFQL 316
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 306/560 (54%), Gaps = 12/560 (2%)
Query: 32 IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPS 91
+I+ Y E G +E AR LFD+M D+D V+W+ MI Y + A + +M P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPLSTSLIDMYVKCK-NLAYAR 149
E + S++ + L G +HG V++ G G + + ++++MY C + A
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVK---LGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG--VIPNEITILSLVKECGT 207
+F + V+WTT+I G+ H + G++++ +M E V P ITI V+ +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASAS 225
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
++++ GK +HA ++ G ++ + + +D+Y +CG A++ F +E+KDL+ + +
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
IS +++ E +F + G PN T SL+ CA +L G+ +H I ++G
Sbjct: 286 ISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGEAALELFV 386
++ +L +L+DMYAKCG+I + R+F DR +++ W M+ G G G A+ELF
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 387 EMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRA 446
+M + G+ P+ I F+ L AC H+GL+++G + F+ M ++G+ P + Y C+VDLL RA
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 447 GLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHK-NVKLGEWAAGQFLSLESHKCGYNVLM 505
G + EA +L+ MP +P+ G++L ACK HK N + AA + + L+ G V++
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 506 SNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
S IYAAE KW D + +R+ MR G KE G+S I V V F + D+ P +Y ++
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Query: 566 AEMREKLDNVGYTPDISAVL 585
+ E+ GY P++ +++
Sbjct: 585 GLLIEETREAGYVPELDSLV 604
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 175/351 (49%), Gaps = 7/351 (1%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
L+T+LI Y + + ARS+FD +V+WT MI GY +N F +M ++G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG-DFRSA 249
PNE T+ S++K C ++ L +G L+H ++ G+ S+ + A ++MY C +A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCA 307
+F I+ K+ + + +I+ + ++ QM + + P IT+ + A
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASA 224
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
S+ GK IH+ + K+G + + + S++D+Y +CG + F D+D++ WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
+IS D AL +F E+QG +PN TF + AC++ L G++L H +
Sbjct: 285 LISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL-HGRIFRR 342
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
G VE ++D+ ++ G + ++Q++ ++ R N V S++ H
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF ++ V N+I+ +Y G L A+ F +M DKD ++W+T+I R+ EAL
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALL 299
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLSTSL 135
+ + P+ S++ A + L G+ LHG + R N+N V L+ +L
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN-----VELANAL 354
Query: 136 IDMYVKCKNLAYARSVF-DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
IDMY KC N+ ++ VF + ++VSWT+M+ GY E + LF KM G+ P+
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 195 EITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
I ++++ C +E G K + GI + +D+ G+ G A
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+LAT I Y + G AR +FD + ++D++ +AMI+ YA +N ++ F +M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG-DIDT 349
G PNE T+ S+L C L G +H + K G++ + ++++MYA C ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM--EAQGVIPNDITFIGALKAC 407
+F ++ + W +I+G LGDG L+++ +M E V P IT A++A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRAS 223
Query: 408 SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+ + GK++ H V G + ++DL R G L EA+ +M
Sbjct: 224 ASIDSVTTGKQI-HASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
K+ L T+L+ Y + G ++ LF DRD++ W MI+G A A E F E
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
M QG PN+ T LK+C + +L G L H +V G+ + M+++ +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGA-LVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 448 LLDEAQKLIIDMPMRPNNVVLGSLLAA 474
+ EA LI N+V +L+
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITG 187
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 293/538 (54%), Gaps = 3/538 (0%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D+ V N+++ +Y + + A+ LFD+M +D VSW+TMI Y G + E L LL
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR ++P + + + V + DL++G+ LH +++ + L T+LI MY+
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF--DVDMHLKTALITMYL 291
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC + V + +V WT MI+G + + + +F +M + G + I S
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+V C + + + G +H + LR+G T+ + I MY KCG + +F+ + +D
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP-NEITMVSLLVLCAKAGSLEMGKWIH 319
L+ +A+IS YAQ + + +F +M ++ + T+VSLL C+ AG+L +GK IH
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+ + I+ + + T+LVDMY+KCG ++ R F + + +D++ W ++I+G G G+
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGD 531
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
ALE++ E G+ PN + F+ L +CSH+G++Q+G ++F MV DFG+ P EH C+
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKC 499
VDLL RA +++A K + RP+ VLG +L AC+ + ++ + + L+
Sbjct: 592 VDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDA 651
Query: 500 GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
G+ V + + +AA +W DVS+ MR G+ K PG S IE+NG F M H +
Sbjct: 652 GHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 252/461 (54%), Gaps = 10/461 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NGF D ++ ++++ +Y + G L AR++F++M ++D V W+ MI Y R G++ EA L
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL 134
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGY-VMRNRNCGQSGVPLSTSLIDM 138
+ +MR +KP + ++ ++ E+ L + LH + V+ +C + + S++++
Sbjct: 135 VNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDC---DIAVMNSMLNL 188
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC ++ A+ +FD +VSW TMI+GY N++E ++L +MR +G+ P++ T
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+ + GT+ LE G++LH ++ G + + L TA I MY KCG ++ V ++I N
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
KD++ + MIS + ++ +F +M G + + S++ CA+ GS ++G +
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y+ + G DT SL+ MYAKCG +D + +F +RD++ WN +ISG A D
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDL 428
Query: 379 EAALELFVEMEAQGVIPND-ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
AL LF EM+ + V D T + L+ACS +G L GK L H +V + P
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK-LIHCIVIRSFIRPCSLVDT 487
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
+VD+ S+ G L+ AQ+ + + + V G L+A H
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFH 527
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 196/408 (48%), Gaps = 8/408 (1%)
Query: 60 WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM 119
+++ I + +G + L M ++ P S++ A L L G ++H V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 120 RNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
N S +S+SL+++Y K LA+AR VF+ +V WT MI Y + E
Sbjct: 74 VNGF--SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDM 239
L +MR +G+ P +T+L ++ G +E + + LH F + G + + + +++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLS--GVLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 240 YGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
Y KC A+ +FD +E +D++ + MIS YA + E+ + +M G+RP++ T
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 300 VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD 359
+ L + LEMG+ +H I K G D LKT+L+ MY KCG + +YR+ +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 360 RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
+D++ W VMISG LG E AL +F EM G + + +C+ G G +
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVV 467
H V G ++ + ++ G LD++ L+I M ++V
Sbjct: 369 -HGYVLRHGYTLDTPALNSLITMYAKCGHLDKS--LVIFERMNERDLV 413
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 187/364 (51%), Gaps = 5/364 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF D+ + A+I MY + G E + ++ + + +KD V W+ MI R G ++AL
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ +M + S A+ S++ A+L LG ++HGYV+R+ + P SLI M
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT--PALNSLITM 390
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP-NEIT 197
Y KC +L + +F+ + +VSW +I+GY +L + + LF +M+ + V + T
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++SL++ C + AL GKL+H +R+ I ++ TA +DMY KCG +A+ FDSI
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-K 316
KD++ +I+ Y D +I+ + G+ PN + +++L C+ G ++ G K
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAML 375
S + G++ + + +VD+ + I+ ++ + R I + +++ C
Sbjct: 571 IFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRAN 630
Query: 376 GDGE 379
G E
Sbjct: 631 GKTE 634
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 280/524 (53%), Gaps = 7/524 (1%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F D++VC A++ Y + G LE A ++FD+M +D V+W+ MI + + L + + L
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 82 DMR-VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
DMR + + P+ ++ + L+ GKA+HGY R + + + T ++D+Y
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF--SNDLVVKTGILDVYA 251
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM--RREGVIPNEITI 198
K K + YAR VFD + V+W+ MI GY+ + E +F +M + + I
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
++ C L G+ +H + ++ G + + + I Y K G A F I
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
KD++ +++I+ +E F +F +M GIRP+ T++ +L C+ +L G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y G +T + +L+DMY KCG +D R+F RDI+ WN M+ G + G G
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH-DFGLVPKVEHYG 437
+ AL LF M+ GV P+++T + L ACSHSGL+ EGK+LF+ M DF ++P+++HY
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
CM DLL+RAG LDEA + MP P+ VLG+LL+AC +KN +LG + + SL
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GE 610
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
VL+SN Y+A +W D + IR + G+ K PG S ++V
Sbjct: 611 TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 234/469 (49%), Gaps = 18/469 (3%)
Query: 35 MYGEVGSLEFARQLFDKMVDK--DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSE 92
+Y +E AR +FD++ + ++W MIR Y N ++ALDL M + V+P++
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 93 IAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ--SGVPLSTSLIDMYVKCKNLAYARS 150
++ A L + GK +H +V NC + + + T+L+D Y KC L A
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHV----NCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 151 VFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEITILSLVKECGTVE 209
VFD +V+W MI+G+ L + I LF+ MRR +G+ PN TI+ + G
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
AL GK +H + R G + +V+ T +D+Y K AR VFD K+ + SAMI
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 270 AYAQTNCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
Y + I E ++F QM ND + + +L+ CA+ G L G+ +H Y K G
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
D ++ +++ YAK G + +R F+ +D++ +N +I+GC + E + LF E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLF-HKMVHDFGLVPKVEHYGCMVDLLSRA 446
M G+ P+ T +G L ACSH L G + +VH + + + + ++D+ ++
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKC 457
Query: 447 GLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
G LD A++ + D + + V ++L +H LG+ A F S++
Sbjct: 458 GKLDVAKR-VFDTMHKRDIVSWNTMLFGFGIH---GLGKEALSLFNSMQ 502
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 186/388 (47%), Gaps = 19/388 (4%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+C GF D+ V I+ +Y + + +AR++FD K+ V+WS MI Y N ++ E
Sbjct: 230 YCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKE 289
Query: 76 ALDLLRDM----RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG--- 128
A ++ M VA V P I + I+ A DL G+ +H Y ++ +G
Sbjct: 290 AGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVK------AGFIL 341
Query: 129 -VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
+ + ++I Y K +L A F ++S+ ++I G + E RLF +MR
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
G+ P+ T+L ++ C + AL G H + + +G ++ + A +DMY KCG
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
A+ VFD++ +D++ + M+ + E +F M + G+ P+E+T++++L C+
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLK--TSLVDMYAKCGDIDTTYRLFAAAT-DRDILM 364
+G ++ GK + + + + ++ + D+ A+ G +D Y + DI +
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQG 392
++S C + E E+ +M++ G
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQSLG 609
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 12/376 (3%)
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI--VSWT 164
+L LG+ +H ++++ R+ S + +L +Y C + AR VFD I ++W
Sbjct: 14 NLVLGQVIHQHLLK-RSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWD 72
Query: 165 TMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN 224
MI Y + + + L+ KM GV P + T ++K C + A++ GKL+H+ +
Sbjct: 73 LMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCS 132
Query: 225 GITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIF 284
+ + TA +D Y KCG+ A VFD + +D++ +AMIS ++ C+ +V +F
Sbjct: 133 DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 285 VQMNDC-GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
+ M G+ PN T+V + +AG+L GK +H Y + G D +KT ++D+YAK
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 344 CGDIDTTYRLFAAATDRDILMWNVMISGCA---MLGD-GEAALELFVEMEAQGVIPNDIT 399
I R+F ++ + W+ MI G M+ + GE ++ V V P I
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
I L C+ G L G R H G + + ++ ++ G L +A + ++
Sbjct: 313 LI--LMGCARFGDLS-GGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 460 PMRPNNVVLGSLLAAC 475
++ + + SL+ C
Sbjct: 370 GLK-DVISYNSLITGC 384
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISV-VLATAFIDMYGKCGDFRSARYVFDSI 256
LSL++ C L G+++H L+ +T+S + +Y C + AR+VFD I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 257 ENKDL--MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ + + MI AYA + ++ D++ +M + G+RP + T +L CA +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
GK IHS+++ D + T+LVD YAKCG+++ ++F RD++ WN MISG ++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 375 LGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
+ LF++M G+ PN T +G A +G L+EG K VH +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG-----KAVHGY-----C 231
Query: 434 EHYGCMVDLLSRAGLLDEAQK--------LIIDMPMRPNNVVLGSLLAA 474
G DL+ + G+LD K + D+ + N V +++
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 307/575 (53%), Gaps = 48/575 (8%)
Query: 41 SLEFARQLFDKMV-DKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
+L+ A+ LF + + ++TMI + +E L M RV P + ++
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
+ L ++K +H +++ + C G L SL+ Y++ N A VF
Sbjct: 141 KASSFLSEVK---QIHCHIIVS-GCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+ S+ MI GY E ++L+ KM +G+ P+E T+LSL+ CG + + GK +H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 220 FTLRNGITIS--VVLATAFIDMYGKC-------------------------------GDF 246
+ R G S ++L+ A +DMY KC GD
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDE-VFDIFVQMNDC-GIRPNEITMVSLLV 304
+A+ VFD + +DL+ ++++ Y++ C V ++F +M ++P+ +TMVSL+
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
A G L G+W+H + + +K D L ++L+DMY KCG I+ + +F AT++D+ +
Sbjct: 377 GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL 436
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
W MI+G A G+G+ AL+LF M+ +GV PN++T + L ACSHSGL++EG +F+ M
Sbjct: 437 WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII-DMPMRPNNVVLGSLLAACKLHKNVKL 483
FG P+ EHYG +VDLL RAG ++EA+ ++ MPMRP+ + GS+L+AC+ ++++
Sbjct: 497 DKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIET 556
Query: 484 GEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG 543
E A + L LE K G VL+SNIYA +WG R AM + G+ K G SS+
Sbjct: 557 AELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVE 616
Query: 544 SVHEFIMGDRE-HP---ETRRIYE-IVAEMREKLD 573
+H F+ +++ HP E +RI + + EM+ KLD
Sbjct: 617 GLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLD 651
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 36/391 (9%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA 86
++ N+++ Y E+G+ A ++F +M D S++ MI Y + G EAL L M
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 87 RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLA 146
++P E ++S++ L D++LGK +HG++ R S + LS +L+DMY KCK
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR------------------ 188
A+ FD + SW TM+ G++ ++ +F +M +
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 189 ---------------EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
E V P+ +T++SL+ L G+ +H +R + L+
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
+A IDMY KCG A VF + KD+ + ++MI+ A + +F +M + G+
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYI-DKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
PN +T++++L C+ +G +E G + +++ DK G +T+ SLVD+ + G ++
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 353 LFAAATD--RDILMWNVMISGCAMLGDGEAA 381
+ MW ++S C D E A
Sbjct: 527 IVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 153/311 (49%), Gaps = 19/311 (6%)
Query: 143 KNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+NL A+ +F F+ ++ + TMI+ +++ NE L+ M R V P+ T L L
Sbjct: 82 ENLDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYL 139
Query: 202 VKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+K + + K +H + +G +++ L + + Y + G+F A VF + + D
Sbjct: 140 MKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + MI YA+ E ++ +M GI P+E T++SLLV C + +GK +H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 321 YIDKQG--IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
+I+++G + L +L+DMY KC + R F A +D+ WN M+ G LGD
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 379 EAALELFVEMEAQGVIP-NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE-HY 436
EAA +F +M + ++ N + F + K C +R ++ ++ +V KV+
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD--------QRTVRELFYEMTIVEKVKPDR 368
Query: 437 GCMVDLLSRAG 447
MV L+S A
Sbjct: 369 VTMVSLISGAA 379
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL-DLLRD 82
+D+ N +++ + +G +E A+ +FD+M +D VSW++++ Y + G + +L +
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 83 MR-VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
M V +VKP + M+S+I A +L G+ +HG V+R + G + LS++LIDMY K
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF--LSSALIDMYCK 415
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
C + A VF + + WT+MI G N + ++LF +M+ EGV PN +T+L++
Sbjct: 416 CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 202 VKECGTVEALEFGKLLHAF 220
+ C +E G LH F
Sbjct: 476 LTACSHSGLVEEG--LHVF 492
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 293/599 (48%), Gaps = 39/599 (6%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
C +G + ++ Y A+ + + + W+ +I +Y +N L +E
Sbjct: 69 CISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEV 128
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
+ + M ++P S++ E +D+ G+ +HG + + +S + + +LI
Sbjct: 129 IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSI--EVSSYKSSLYVCNALI 186
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV----- 191
MY + +N+ AR +FD VSW +I Y +E LF KM GV
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 192 ---------------------------IPNEITILSLV---KECGTVEALEFGKLLHAFT 221
P + ++++ K C + A+ GK +H
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA 306
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
+ + + I MY KC D R A VF E L +++IS YAQ N +E
Sbjct: 307 IHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD-TKLKTSLVDM 340
+ +M G +PN IT+ S+L LCA+ +L+ GK H YI ++ +D T L SLVD+
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 341 YAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITF 400
YAK G I ++ + RD + + +I G G+G AL LF EM G+ P+ +T
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
+ L ACSHS L+ EG+RLF KM ++G+ P ++H+ CMVDL RAG L +A+ +I +MP
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 461 MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSD 520
+P+ +LL AC +H N ++G+WAA + L ++ GY VL++N+YAA W +++
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 521 IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKL-DNVGYT 578
+R MRD G+ K+PG + I+ + F +GD PE Y ++ + + + DN GY
Sbjct: 607 VRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA 665
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 30/397 (7%)
Query: 14 ARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGR 69
AR + F RD NA+I Y G A +LFDKM V+ ++W+ + +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 70 NGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV 129
G AL L+ MR +AMI + + + ++LGK +HG + + G V
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 130 PLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+LI MY KCK+L +A VF S+ +W ++I+GY N E L +M
Sbjct: 318 --RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRS 248
G PN IT+ S++ C + L+ GK H + LR +L + +D+Y K G +
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
A+ V D + +D + +++I Y +F +M GI+P+ +T+V++L C+
Sbjct: 436 AKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Query: 309 AGSLEMGKWIHSYID-KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL---- 363
+ + G+ + + + GI+ + + +VD+Y + G + A +DI+
Sbjct: 496 SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFL---------AKAKDIIHNMP 546
Query: 364 ------MWNVMISGCAMLGD---GEAALELFVEMEAQ 391
W +++ C + G+ G+ A E +EM+ +
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPE 583
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 11/245 (4%)
Query: 175 NLNEGIRLF--VKMRREGVIPNEITI---LSLVKECGTVEALEFGKLLHAFTLRNGITIS 229
+L++ + F ++++ + +++ + SL+ C V A G +HA + +G+
Sbjct: 18 HLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYH 77
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLM---ICSAMISAYAQTNCIDEVFDIFVQ 286
VL + Y A+ + IEN D++ + +I++YA+ +EV + +
Sbjct: 78 SVLVPKLVTFYSAFNLHNEAQSI---IENSDILHPLPWNVLIASYAKNELFEEVIAAYKR 134
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
M GIRP+ T S+L C + + G+ +H I+ K + +L+ MY + +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
+ RLF +RD + WN +I+ A G A ELF +M GV + IT+
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 407 CSHSG 411
C +G
Sbjct: 255 CLQTG 259
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 293/527 (55%), Gaps = 7/527 (1%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV--DKDAVSWSTMIRNYGRNGL--LDE 75
+GF +V + +++ Y + L+FA F+++ ++ SW+T++ Y ++ +
Sbjct: 33 HGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSD 92
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
L L MR ++ I L L+ G +HG M+N V + SL
Sbjct: 93 VLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYV--APSL 150
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
++MY + + A+ VFD + V W ++ GY+ + E RLF MR G+ +
Sbjct: 151 VEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDA 210
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFD 254
+T++ LVK CG V A + GK +H ++R I S L + IDMY KC +AR +F+
Sbjct: 211 LTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE 270
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ ++++++ + +IS +A+ E FD+F QM I PN+ T+ ++LV C+ GSL
Sbjct: 271 TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRH 330
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
GK +H Y+ + GI+ D TS +DMYA+CG+I +F +R+++ W+ MI+ +
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G E AL+ F +M++Q V+PN +TF+ L ACSHSG ++EG + F M D+G+VP+ E
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSL 494
HY CMVDLL RAG + EA+ I +MP++P G+LL+AC++HK V L A + LS+
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM 510
Query: 495 ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
E K VL+SNIYA W V+ +RR M G K G S+ EV
Sbjct: 511 EPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 199/368 (54%), Gaps = 3/368 (0%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG +D +V +++ MY ++G++E A+++FD++ +++V W +++ Y + E
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L MR + + +I ++ + K+GK +HG +R QS L S+IDM
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY-LQASIIDM 255
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
YVKC+ L AR +F+ ++V WTT+I+G+ E LF +M RE ++PN+ T+
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+++ C ++ +L GK +H + +RNGI + V T+FIDMY +CG+ + AR VFD +
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE 375
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KW 317
++++ S+MI+A+ +E D F +M + PN +T VSLL C+ +G+++ G K
Sbjct: 376 RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQ 435
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL-MWNVMISGCAMLG 376
S G+ + + +VD+ + G+I + + W ++S C +
Sbjct: 436 FESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHK 495
Query: 377 DGEAALEL 384
+ + A E+
Sbjct: 496 EVDLAGEI 503
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 300/545 (55%), Gaps = 15/545 (2%)
Query: 37 GEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMI 96
G +G + +AR++FD++ + +++MI Y R DE L L M +++P
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 97 SIIHVFAELVDLKLGKAL------HGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARS 150
I + L+ G+A+ GY ++ V + +S++++Y+KC + A
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGY--------KNDVFVCSSVLNLYMKCGKMDEAEV 172
Query: 151 VFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEA 210
+F + ++ WTTM+ G+ + + + +M+ EG + + +L L++ G +
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 211 LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISA 270
+ G+ +H + R G+ ++VV+ T+ +DMY K G A VF + K + ++IS
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 271 YAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD 330
+AQ ++ F+ V+M G +P+ +T+V +LV C++ GSL+ G+ +H YI K+ + D
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LD 351
Query: 331 TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
T+L+DMY+KCG + ++ +F +D++ WN MIS + G+G+ + LF++M
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLD 450
+ P+ TF L A SHSGL+++G+ F M++ + + P +HY C++DLL+RAG ++
Sbjct: 412 SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVE 471
Query: 451 EAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYA 510
EA +I + + +LL+ C H+N+ +G+ AA + L L G L+SN +A
Sbjct: 472 EALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFA 531
Query: 511 AENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMRE 570
NKW +V+ +R+ MR+ + K PG S+IEVNG + F+M D H E + +++ ++
Sbjct: 532 TANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKT 591
Query: 571 KLDNV 575
++ +V
Sbjct: 592 EIRDV 596
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 194/358 (54%), Gaps = 13/358 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ DVFVC++++ +Y + G ++ A LF KM +D + W+TM+ + + G +A++
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TSLI 136
R+M+ + M+ ++ +L D K+G+++HGY+ R +G+P++ TSL+
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR------TGLPMNVVVETSLV 259
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
DMY K + A VF + VSW ++I+G+ N+ V+M+ G P+ +
Sbjct: 260 DMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLV 319
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T++ ++ C V +L+ G+L+H + L+ + + V ATA +DMY KCG S+R +F+ +
Sbjct: 320 TLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHV 378
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGK 316
KDL+ + MIS Y EV +F++M + I P+ T SLL + +G +E G+
Sbjct: 379 GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ 438
Query: 317 -WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGC 372
W I+K I+ K L+D+ A+ G ++ + + D + +W ++SGC
Sbjct: 439 HWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGC 496
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 188/381 (49%), Gaps = 7/381 (1%)
Query: 114 LHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
+H +V+ N +G +S LI + ++YAR VFD + + +MI Y
Sbjct: 36 IHAFVISTGNL-LNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
N +E +RL+ +M E + P+ T +K C + LE G+ + + G V +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
++ +++Y KCG A +F + +D++ + M++ +AQ + + + +M + G
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+ + M+ LL G +MG+ +H Y+ + G+ + ++TSLVDMYAK G I+ R+
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F+ + + W +ISG A G A E VEM++ G P+ +T +G L ACS G L
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
+ G RL H + ++ +V M D+ S+ G L +++ I + R + V ++++
Sbjct: 335 KTG-RLVHCYILKRHVLDRVTATALM-DMYSKCGALSSSRE-IFEHVGRKDLVCWNTMIS 391
Query: 474 ACKLHKNVKLGEWAAGQFLSL 494
+H N G+ FL +
Sbjct: 392 CYGIHGN---GQEVVSLFLKM 409
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 251/456 (55%), Gaps = 32/456 (7%)
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV- 191
T ++D K +++ YA +F+ S ++ + ++I Y H + + IR++ ++ R+
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE 105
Query: 192 IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
+P+ T + K C ++ + GK +H + G VV A IDMY K D A
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 252 VFDSIENKD-------------------------LMI------CSAMISAYAQTNCIDEV 280
VFD + +D LM+ +AMIS Y C E
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 281 FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDM 340
D F +M GI P+EI+++S+L CA+ GSLE+GKWIH Y +++G + T + +L++M
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 341 YAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITF 400
Y+KCG I +LF +D++ W+ MISG A G+ A+E F EM+ V PN ITF
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
+G L ACSH G+ QEG R F M D+ + PK+EHYGC++D+L+RAG L+ A ++ MP
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Query: 461 MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSD 520
M+P++ + GSLL++C+ N+ + A + LE G VL++NIYA KW DVS
Sbjct: 406 MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSR 465
Query: 521 IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHP 556
+R+ +R+ + K PG S IEVN V EF+ GD P
Sbjct: 466 LRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 187/412 (45%), Gaps = 45/412 (10%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+G + F+ ++ ++ +++A +LF+++ + + ++++IR Y N L + + +
Sbjct: 36 HGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRI 95
Query: 80 LRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ + R + P + A L LGK +HG++ + + V +LIDM
Sbjct: 96 YKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF--GPRFHVVTENALIDM 153
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN--------------------- 177
Y+K +L A VFD ++SW ++++GY +
Sbjct: 154 YMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMI 213
Query: 178 ----------EGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGIT 227
E + F +M+ G+ P+EI+++S++ C + +LE GK +H + R G
Sbjct: 214 SGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFL 273
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM 287
+ A I+MY KCG A +F +E KD++ S MIS YA + F +M
Sbjct: 274 KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID--KQGIKRDTKLK--TSLVDMYAK 343
++PN IT + LL C+ G + G Y D +Q + + K++ L+D+ A+
Sbjct: 334 QRAKVKPNGITFLGLLSACSHVGMWQEGL---RYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 344 CGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGEAAL---ELFVEMEAQ 391
G ++ + + D +W ++S C G+ + AL + VE+E +
Sbjct: 391 AGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPE 442
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 305/576 (52%), Gaps = 28/576 (4%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++ F D V A + MY + +++ A+ LFD + + S++ MI Y + +AL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L + + + EI++ + A + L G ++G +++ V ++ + IDM
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL--SLDVCVANAAIDM 426
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC+ LA A VFD VSW +IA + E + LFV M R + P+E T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV------ 252
S++K C T +L +G +H+ +++G+ + + + IDMY KCG A +
Sbjct: 487 GSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 253 ----------FDSIENKDLM-IC---SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
+ + NK L +C +++IS Y ++ +F +M + GI P++ T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
++L CA S +GK IH+ + K+ ++ D + ++LVDMY+KCGD+ + +F +
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 359 DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKR 418
RD + WN MI G A G GE A++LF M + + PN +TFI L+AC+H GL+ +G
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 419 LFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
F+ M D+GL P++ HY MVD+L ++G + A +LI +MP ++V+ +LL C +H
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 479 K-NVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
+ NV++ E A L L+ L+SN+YA W VSD+RR MR + KEPG S
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 538 SIEVNGSVHEFIMGDREHPETRRIYE----IVAEMR 569
+E+ +H F++GD+ HP IYE I +EM+
Sbjct: 846 WVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 230/463 (49%), Gaps = 9/463 (1%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RDV N +I Y + + A F+ M +D VSW++M+ Y +NG +++++ DM
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
++ I+ V + L D LG +HG V+R C + V +++L+DMY K K
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGC-DTDVVAASALLDMYAKGK 229
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
+ VF G + VSW+ +IAG + N L+ ++ F +M++ ++ S+++
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C + L G LHA L++ ++ TA +DMY KC + + A+ +FD+ EN +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+AMI+ Y+Q + +F ++ G+ +EI++ + CA L G I+
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K + D + + +DMY KC + +R+F RD + WN +I+ G G L
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC-MVDL 442
LFV M + P++ TF LKAC+ G L G + H + G+ GC ++D+
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEI-HSSIVKSGMASN-SSVGCSLIDM 526
Query: 443 LSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGE 485
S+ G+++EA+K+ R N V G++ K+H N +L E
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMH-NKRLQE 566
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 232/478 (48%), Gaps = 25/478 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G DV +A++ MY + + ++F + +K++VSWS +I +N LL AL
Sbjct: 210 GCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFF 269
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
++M+ S+ S++ A L +L+LG LH + +++ + G+ + T+ +DMY
Sbjct: 270 KEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS-DFAADGI-VRTATLDMYA 327
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC N+ A+ +FD + S+ MI GY + + + LF ++ G+ +EI++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
+ + C V+ L G ++ +++ +++ V +A A IDMYGKC A VFD + +D
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +A+I+A+ Q E +FV M I P+E T S+L C GSL G IHS
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD------------------- 361
I K G+ ++ + SL+DMY+KCG I+ ++ + R
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 362 -ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
+ WN +ISG M E A LF M G+ P+ T+ L C++ GK++
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI- 625
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
H V L V +VD+ S+ G L ++ +L+ + +R + V +++ H
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHH 682
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 175/402 (43%), Gaps = 43/402 (10%)
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLST----SLIDMYVKCKNLAYARSVFDGFSGASIVSW 163
L+LGK H +++ SG +T L+ +Y ++ A VFD +VSW
Sbjct: 64 LELGKQAHAHMI------ISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 164 TTMIAGYIHTNNLNEG-------------------------------IRLFVKMRREGVI 192
MI GY +N++ + I +FV M REG+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
+ T ++K C +E G +H +R G VV A+A +DMY K F + V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F I K+ + SA+I+ Q N + F +M ++ S+L CA L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
+G +H++ K D ++T+ +DMYAKC ++ LF + + + +N MI+G
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
+ G AL LF + + G+ ++I+ G +AC+ L EG +++ + L
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLD 416
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
V +D+ + L EA ++ +M R + V +++AA
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 51/210 (24%)
Query: 306 CAKAGSLEMGKWIHSYIDKQGIK-------------------------------RDTKLK 334
CAK G+LE+GK H+++ G + RD
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+++ Y+K D+ F RD++ WN M+SG G+ ++E+FV+M +G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLD---- 450
+ TF LK CS G ++ G+V +V GC D+++ + LLD
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQI-------HGIVVRV---GCDTDVVAASALLDMYAK 227
Query: 451 -----EAQKLIIDMPMRPNNVVLGSLLAAC 475
E+ ++ +P + N+V +++A C
Sbjct: 228 GKRFVESLRVFQGIPEK-NSVSWSAIIAGC 256
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 307/564 (54%), Gaps = 13/564 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF V N+I+ MY + SL AR+LFD+M ++D +SWS +IR+Y ++ L L
Sbjct: 154 SGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKL 212
Query: 80 LRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
++M A+ +P + + S++ + D+ +G+++HG+ +R R + V + SLIDM
Sbjct: 213 FKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIR-RGFDLADVFVCNSLIDM 271
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y K ++ A VFD + +IVSW +++AG++H +E + +F M +E V +E+T+
Sbjct: 272 YSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTV 331
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+SL++ C E K +H +R G + V ++ ID Y C A V DS+
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
KD++ CS MIS A DE IF M D PN IT++SLL C+ + L KW
Sbjct: 392 KDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWA 448
Query: 319 HSYIDKQGIK-RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
H ++ + D + TS+VD YAKCG I+ R F T+++I+ W V+IS A+ G
Sbjct: 449 HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGL 508
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
+ AL LF EM+ +G PN +T++ AL AC+H GL+++G +F MV + P ++HY
Sbjct: 509 PDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYS 567
Query: 438 CMVDLLSRAGLLDEAQKLIIDMP--MRPNNVVLGSLLAACK-LHKNVKLGEWAAGQFLSL 494
C+VD+LSRAG +D A +LI ++P ++ G++L+ C+ K + + + L L
Sbjct: 568 CIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLEL 627
Query: 495 ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDRE 554
E +L S+ +AAE W DV+ +RR +++ + G S + F+ GD+
Sbjct: 628 EPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKL 687
Query: 555 HPETRRIYEIVAEMRE--KLDNVG 576
+ ++V + KLD+
Sbjct: 688 SQSDSELNDVVQSLHRCMKLDDTA 711
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 216/431 (50%), Gaps = 10/431 (2%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
+F N+I Y + G L + FD M +D+VSW+ ++ G +E L +RV
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+P+ ++ +IH L G+ +HGYV+R+ CG S V S++ MY +L
Sbjct: 121 WGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSV--QNSILCMYADSDSL 176
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSLVKE 204
+ AR +FD S ++SW+ +I Y+ + G++LF +M E P+ +T+ S++K
Sbjct: 177 S-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKA 235
Query: 205 CGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
C +E ++ G+ +H F++R G ++ V + + IDMY K D SA VFD ++++
Sbjct: 236 CTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS 295
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+++++ + DE ++F M + +E+T+VSLL +C K IH I
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
++G + + +SL+D Y C +D + + T +D++ + MISG A G + A+
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
+F M PN IT I L ACS S L+ K + + + +VD
Sbjct: 416 IFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 444 SRAGLLDEAQK 454
++ G ++ A++
Sbjct: 473 AKCGAIEMARR 483
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 37/389 (9%)
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
S+ D Y+KC +L FD + VSW ++ G + EG+ F K+R G P
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 194 NEITILSLVKECGTVEALEF-GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
N T++ ++ C +L F G+ +H + +R+G + + + MY D SAR +
Sbjct: 126 NTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKL 181
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGS 311
FD + +D++ S +I +Y Q+ +F +M ++ P+ +T+ S+L C
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 312 LEMGKWIHSYIDKQGIK-RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
+++G+ +H + ++G D + SL+DMY+K D+D+ +R+F T R+I+ WN +++
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS-----------HSGLLQEGKRL 419
G + ALE+F M + V +++T + L+ C H +++ G
Sbjct: 302 GFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYES 361
Query: 420 FH-------------KMVHDFGLVPKVEHY------GCMVDLLSRAGLLDEAQKLIIDMP 460
+V D G V Y M+ L+ AG DEA + M
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Query: 461 MRPNNVVLGSLLAACKLHKNVKLGEWAAG 489
PN + + SLL AC + +++ +WA G
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSKWAHG 450
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 315/624 (50%), Gaps = 75/624 (12%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++G VFV +++ MYG+ G L+ A ++FD++ D++AV+W+ ++ Y +NG +E
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEE 257
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L DMR V+P+ + + + + A + ++ GK H + N + L TSL
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGM--ELDNILGTSL 315
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
++ Y K + YA VFD +V+W +I+GY+ + + I + MR E + +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+T+ +L+ E L+ GK + + +R+ +VLA+ +DMY KCG A+ VFDS
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 256 IENKDLMICSAMISAYAQTNC-----------------------------------IDEV 280
KDL++ + +++AYA++ +DE
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEA 495
Query: 281 FDIFVQM---------------------NDC--------------GIRPNEITMVSLLVL 305
D+F+QM N C G+RPN ++ L
Sbjct: 496 KDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRD-TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
CA SL +G+ IH YI + ++TSLVDMYAKCGDI+ ++F + ++ +
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
N MIS A+ G+ + A+ L+ +E G+ P++IT L AC+H+G + + +F +V
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
+ P +EHYG MVDLL+ AG ++A +LI +MP +P+ ++ SL+A+C + +L
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 485 EWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGS 544
++ + + L E G V +SN YA E W +V +R M+ G+ K+PG S I++ G
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Query: 545 --VHEFIMGDREHPETRRIYEIVA 566
VH F+ D+ H I ++A
Sbjct: 796 EGVHVFVANDKTHTRINEIQMMLA 819
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 261/520 (50%), Gaps = 15/520 (2%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
+ R+ ++ +++ Y + +LE A LF K+ ++ SW+ +I R GL + AL
Sbjct: 103 YARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFV 162
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN--RNCGQSGVPLSTSLIDMY 139
+M + P + ++ L + G+ +HGYV+++ +C V +++SL DMY
Sbjct: 163 EMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC----VFVASSLADMY 218
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC L A VFD + V+W ++ GY+ E IRLF MR++GV P +T+
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+ + + +E GK HA + NG+ + +L T+ ++ Y K G A VFD + K
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ + +IS Y Q +++ + M ++ + +T+ +L+ A+ +L++GK +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
Y + + D L ++++DMYAKCG I ++F + ++D+++WN +++ A G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
AL LF M+ +GV PN IT+ + + +G + E K +F +M G++P + + M
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTM 517
Query: 440 VDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
++ + + G +EA + M +RPN + L+AC ++ +G G +
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Query: 497 HKCGYNVLMS--NIYAAENKWGDVSDIRRAMRDAGISKEP 534
H ++ S ++YA K GD++ + S+ P
Sbjct: 578 HSSLVSIETSLVDMYA---KCGDINKAEKVFGSKLYSELP 614
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 201/425 (47%), Gaps = 16/425 (3%)
Query: 57 AVSWSTMIRNYGRNGLLDEALDLLRDM--RVARVKPSEIAMISIIHVFAELVDLKLGKAL 114
+ S+ + + +NG + EAL L+ +M R R+ P I V+ DL GK +
Sbjct: 35 STSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYER--DLSTGKQI 92
Query: 115 HGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTN 174
H +++N + + T L+ Y KC L A +F ++ SW +I
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ FV+M + P+ + ++ K CG ++ FG+ +H + +++G+ V +A+
Sbjct: 153 LCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+ DMYGKCG A VFD I +++ + +A++ Y Q +E +F M G+ P
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+T+ + L A G +E GK H+ G++ D L TSL++ Y K G I+ +F
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
++D++ WN++ISG G E A+ + M + + + +T + A + + L+
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 415 EGKR-----LFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
GK + H D L V +D+ ++ G + +A+K + D + + ++
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTV------MDMYAKCGSIVDAKK-VFDSTVEKDLILWN 445
Query: 470 SLLAA 474
+LLAA
Sbjct: 446 TLLAA 450
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 310/661 (46%), Gaps = 52/661 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
+ G + N +I Y ++G + A L KM + D +W+ MI NG+
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+ALD+ R M +A V P+ + ++S + + L + G +H ++ V + S
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD--VLVGNS 392
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+DMY KC L AR VFD + +W +MI GY + LF +M+ + PN
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
IT I Y K GD A +F
Sbjct: 453 IITW-----------------------------------NTMISGYIKNGDEGEAMDLFQ 477
Query: 255 SIE-----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
+E ++ + +I+ Y Q DE ++F +M PN +T++SLL CA
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
+M + IH + ++ + +K +L D YAK GDI+ + +F +DI+ WN +I
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
G + G AL LF +M+ QG+ PN T + A G + EGK++F+ + +D+ +
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHI 657
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAG 489
+P +EH MV L RA L+EA + I +M ++ + S L C++H ++ + AA
Sbjct: 658 IPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 490 QFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFI 549
SLE ++S IYA K G + + RD + K G S IEV +H F
Sbjct: 718 NLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFT 777
Query: 550 MGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYG 609
GD+ T +Y +V +M +LDN D + I+ E +E HSEK AMA+G
Sbjct: 778 TGDQSKLCTDVLYPLVEKM-SRLDN---RSDQYNGELWIEEEGREETCGIHSEKFAMAFG 833
Query: 610 LISV--APGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDY 667
LIS A IRI+KNLR+C D H+ +S+ YG +I++ D HHFK G CSC DY
Sbjct: 834 LISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDY 893
Query: 668 W 668
W
Sbjct: 894 W 894
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 184/461 (39%), Gaps = 114/461 (24%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DVFV ++ MY + G + AR++FD M +++ +WS MI Y R E L R M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPLSTSLIDMYVKCK 143
V P + I+ A D++ GK +H V++ G S + +S S++ +Y KC
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK---LGMSSCLRVSNSILAVYAKCG 230
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT------ 197
L +A F +++W +++ Y E + L +M +EG+ P +T
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 198 ---------------------------------ILSLVKECGTVEALE-FGKLLHAFTLR 223
I L+ +AL+ F K+ A +
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 224 NGITI--------------------SVVLATAFI----------DMYGKCGDFRSARYVF 253
N +TI S+ + FI DMY KCG AR VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
DS++NKD+ ++MI+ Y Q + +++F +M D +RPN IT
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT--------------- 455
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-----AATDRDILMWNVM 368
W +++ Y K GD LF R+ WN++
Sbjct: 456 ---W-----------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
I+G G + ALELF +M+ +PN +T + L AC++
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 148/302 (49%), Gaps = 9/302 (2%)
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS--VVLATAFIDMYGKCGD 245
++G T L L++ C ++ G++LHA R G+ V + T + MY KCG
Sbjct: 74 QQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGC 130
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVL 305
AR VFDS+ ++L SAMI AY++ N EV +F M G+ P++ +L
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMW 365
CA G +E GK IHS + K G+ ++ S++ +YAKCG++D + F +RD++ W
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 366 NVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
N ++ G E A+EL EME +G+ P +T+ + + G L KM
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-E 309
Query: 426 DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNVVLGSLLAACKLHKNVK 482
FG+ V + M+ L G+ +A + M + PN V + S ++AC K +
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 483 LG 484
G
Sbjct: 370 QG 371
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 176/389 (45%), Gaps = 37/389 (9%)
Query: 69 RNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG 128
RNG L EA L + K + ++ + + LG+ LH R +
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
V + T L+ MY KC +A AR VFD ++ +W+ MI Y N E +LF M +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
+GV+P++ +++ C +E GK++H+ ++ G++ + ++ + + +Y KCG+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
A F + +D++ ++++ AY Q +E ++ +M GI P +T L+
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI----- 289
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC-GDIDTTYRLFAAATDRDILMWNV 367
G ++G KC +D ++ D+ W
Sbjct: 290 GGYNQLG---------------------------KCDAAMDLMQKMETFGITADVFTWTA 322
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
MISG G AL++F +M GV+PN +T + A+ ACS ++ +G + H +
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKM 381
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
G + V +VD+ S+ G L++A+K+
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 287/541 (53%), Gaps = 2/541 (0%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
V+V ++++ MY VG ++ + ++F +M ++AV+W+ +I G E L +M
Sbjct: 142 SVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+ + A L +K GKA+H +V+ + + ++ SL MY +C
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV--TTLCVANSLATMYTECGE 259
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ +F+ S +VSWT++I Y + + F+KMR V PNE T S+
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C ++ L +G+ LH L G+ S+ ++ + + MY CG+ SA +F + +D++
Sbjct: 320 CASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISW 379
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
S +I Y Q +E F F M G +P + + SLL + +E G+ +H+
Sbjct: 380 STIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC 439
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G+++++ +++SL++MY+KCG I +F DI+ MI+G A G + A++L
Sbjct: 440 FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F + G P+ +TFI L AC+HSG L G F+ M + + P EHYGCMVDLL
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLC 559
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
RAG L +A+K+I +M + ++VV +LL ACK +++ G AA + L L+ V
Sbjct: 560 RAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT 619
Query: 505 MSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEI 564
++NIY++ + +++R+ M+ G+ KEPG SSI++ V F+ GDR HP++ IY I
Sbjct: 620 LANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNI 679
Query: 565 V 565
+
Sbjct: 680 L 680
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 199/415 (47%), Gaps = 5/415 (1%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA--RVKPSEIAMIS 97
G+L ARQ+FDKM D VSW+++I+ Y DEAL L MRV V P +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG 157
++ + ++ G++LH Y ++ S V + +SL+DMY + + + VF
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLL--SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+ V+WT +I G +H EG+ F +M R + + T +K C + +++GK +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCI 277
H + G ++ +A + MY +CG+ + +F+++ +D++ +++I AY +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 278 DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
+ + F++M + + PNE T S+ CA L G+ +H + G+ + S+
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
+ MY+ CG++ + LF RDI+ W+ +I G G GE + F M G P D
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
L + ++ EG R H + FGL ++++ S+ G + EA
Sbjct: 412 FALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 187/375 (49%), Gaps = 9/375 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF + V N++ MY E G ++ LF+ M ++D VSW+++I Y R G +A++
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
MR ++V P+E S+ A L L G+ LH V+ + G + +S S++ MY
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL---SLGLNDSLSVSNSMMKMY 355
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
C NL A +F G I+SW+T+I GY EG + F MR+ G P + +
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
SL+ G + +E G+ +HA L G+ + + ++ I+MY KCG + A +F +
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ +AMI+ YA+ E D+F + G RP+ +T +S+L C +G L++G
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 320 SYIDKQGIKRDTKLKTS-LVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD 377
+ + + R K +VD+ + G + ++ + +D ++W ++ C GD
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 378 ---GEAALELFVEME 389
G A E +E++
Sbjct: 596 IERGRRAAERILELD 610
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 3/321 (0%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR--REGVIPNEITILSL 201
NL AR VFD IVSWT++I Y+ NN +E + LF MR V P+ + +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+K CG + +G+ LHA+ ++ + SV + ++ +DMY + G + VF + ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ +A+I+ E F +M+ + T L CA ++ GK IH++
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
+ +G + SL MY +CG++ LF ++RD++ W +I +G A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
+E F++M V PN+ TF AC+ L G++L H V GL + M+
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL-HCNVLSLGLNDSLSVSNSMMK 353
Query: 442 LLSRAGLLDEAQKLIIDMPMR 462
+ S G L A L M R
Sbjct: 354 MYSTCGNLVSASVLFQGMRCR 374
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 245/454 (53%), Gaps = 8/454 (1%)
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
P + + ++ GK +HG V + + + SL+ Y C A
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIV--TKMGFYDDIYVQNSLVHFYGVCGESRNAC 161
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
VF +VSWT +I G+ T E + F KM E PN T + ++ G V
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVG 218
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
L GK +H L+ IS+ A IDMY KC A VF +E KD + ++MIS
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 270 AYAQTNCIDEVFDIFVQMN-DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
E D+F M GI+P+ + S+L CA G+++ G+W+H YI GIK
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
DT + T++VDMYAKCG I+T +F +++ WN ++ G A+ G G +L F EM
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM-VHDFGLVPKVEHYGCMVDLLSRAG 447
G PN +TF+ AL AC H+GL+ EG+R FHKM ++ L PK+EHYGCM+DLL RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 448 LLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNV-KLGEWAAGQFLSLESHKCGYNVLMS 506
LLDEA +L+ MP++P+ + G++L+ACK + +L + FL +E G VL+S
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 507 NIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
NI+AA +W DV+ IRR M+ GISK PG S IE
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 13/362 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF+ D++V N+++ YG G A ++F +M +D VSW+ +I + R GL EALD
Sbjct: 136 GFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTF 195
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST--SLIDM 138
M V+P+ + ++ + L LGK +HG +++ S + L T +LIDM
Sbjct: 196 SKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKR----ASLISLETGNALIDM 248
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR-REGVIPNEIT 197
YVKC+ L+ A VF VSW +MI+G +H E I LF M+ G+ P+
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+ S++ C ++ A++ G+ +H + L GI + TA +DMY KCG +A +F+ I
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+K++ +A++ A E F +M G +PN +T ++ L C G ++ G+
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 318 IHSYIDKQGIKRDTKLK--TSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAM 374
+ + KL+ ++D+ + G +D L A D+ + ++S C
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 375 LG 376
G
Sbjct: 489 RG 490
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 22/336 (6%)
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
RSV FS + T+++ Y + I + G P+ T + K CG
Sbjct: 66 RSVLSSFS------YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
+ GK +H + G + + + + YG CG+ R+A VF + +D++ + +I
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
+ + +T E D F +M+ + PN T V +LV + G L +GK IH I K+
Sbjct: 180 TGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+ +L+DMY KC + R+F +D + WN MISG + A++LF M
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 389 E-AQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE---HYG-CMVDLL 443
+ + G+ P+ L AC+ G + G + VH++ L ++ H G +VD+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 444 SRAGLLDEAQKLIIDMPMRPNNV-VLGSLLAACKLH 478
++ G ++ A L I +R NV +LL +H
Sbjct: 352 AKCGYIETA--LEIFNGIRSKNVFTWNALLGGLAIH 385
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 13/269 (4%)
Query: 192 IPNEITILSLVKECGTVEALEF--GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS- 248
+P + +L L+ C ++ + +L+ LR+ + I+ V + GK DF S
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKV-----VTFLGKSADFASY 57
Query: 249 ARYVFDSIENK-DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+ + SI + + ++S+YA + + G P+ T + C
Sbjct: 58 SSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACG 117
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
K + GK IH + K G D ++ SLV Y CG+ ++F RD++ W
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTG 177
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
+I+G G + AL+ F +M+ + PN T++ L + G L GK + H ++
Sbjct: 178 IITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGI-HGLILKR 233
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
+ +E ++D+ + L +A ++
Sbjct: 234 ASLISLETGNALIDMYVKCEQLSDAMRVF 262
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 328/690 (47%), Gaps = 42/690 (6%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVG--SLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
++GF VFV N+++ +Y + S + +LFD++ +D SW+T++ + + G +A
Sbjct: 209 KSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 77 LDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
DL +M RV + +++ + L G+ LHG +R + V + +L
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSV--NNAL 326
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY---------------------IHTN 174
I Y K ++ S+++ V++T MI Y I N
Sbjct: 327 IGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 175 NLNEG----------IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN 224
L G ++LF M + GV + ++ S V CG V + + +H F ++
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 225 GITISVVLATAFIDMYGKCGDFRSARYVFDSIENK--DLMICSAMISAYAQTNCIDEVFD 282
G + + TA +DM +C A +FD + +++I YA+ D+
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVS 506
Query: 283 IFVQ-MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
+F + + + + +E+++ +L +C G EMG IH Y K G D L SL+ MY
Sbjct: 507 LFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMY 566
Query: 342 AKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFI 401
AKC D D ++F + D++ WN +IS + +G+ AL L+ M + + P+ IT
Sbjct: 567 AKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLT 626
Query: 402 GALKAC--SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+ A + S L + LF M + + P EHY V +L GLL+EA+ I M
Sbjct: 627 LVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM 686
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVS 519
P++P VL +LL +C++H N + + A LS + +L SNIY+A W
Sbjct: 687 PVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSE 746
Query: 520 DIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTP 579
IR MR+ G K P S I +H F D HP+ + IY + + + VGY P
Sbjct: 747 MIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEP 806
Query: 580 DISAVLMNIDGEEKETALNYHSEKLAMAYGLISV-APGAPIRIVKNLRVCDDYHNATMLL 638
+ VL +D K++ L +HS KLA+ YG++S G P+R++KN+ +C D H +
Sbjct: 807 NTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYI 866
Query: 639 SRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
S + REI++RD + FHHF G CSC D W
Sbjct: 867 SVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 187/405 (46%), Gaps = 53/405 (13%)
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG 157
++ + A+ D+++ KA+H ++ R + L +LI Y+K A VF S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR---EEKTRLGNALISTYLKLGFPREAILVFVSLSS 142
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGKL 216
++VS+T +I+G+ N E +++F +MR+ G++ PNE T ++++ C V G
Sbjct: 143 PTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
Query: 217 LHAFTLRNGITISVVLATAFIDMYGK-----CGDFRSARYVFDSIENKDLMICSAMISAY 271
+H +++G SV ++ + + +Y K C D +FD I +D+ + ++S+
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSL 259
Query: 272 AQTNCIDEVFDIFVQMNDC-GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD 330
+ + FD+F +MN G + T+ +LL C + L G+ +H + G+ ++
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 331 TKLKTSLVDMYAKCGD-------------------------------IDTTYRLFAAATD 359
+ +L+ Y+K D +D+ +FA T+
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 360 RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
++ + +N +++G G G AL+LF +M +GV D + A+ AC GL+ E K
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKK-- 434
Query: 420 FHKMVHDFGLVPKVEHYGC----MVDLLSRAGLLDEAQKLIIDMP 460
+ +H F + C ++D+ +R + +A+++ P
Sbjct: 435 VSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 206/488 (42%), Gaps = 51/488 (10%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVA-RV 88
NA+I Y ++G A +F + VS++ +I + R L EAL + MR A V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK-----CK 143
+P+E ++I+ + LG +HG ++++ + V +S SL+ +Y K C
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL--NSVFVSNSLMSLYDKDSGSSCD 235
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEITILSLV 202
++ +FD + SW T+++ + ++ LF +M R EG + T+ +L+
Sbjct: 236 DVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLL 292
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
C L G+ LH +R G+ + + A I Y K D + +++ + +D +
Sbjct: 293 SSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAV 352
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMND-------------C------------------G 291
+ MI+AY +D +IF + + C G
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG 412
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC---GDID 348
+ + ++ S + C ++ + IH + K G + ++T+L+DM +C D +
Sbjct: 413 VELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 349 TTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF-VEMEAQGVIPNDITFIGALKAC 407
+ + + D ++ I G A G + A+ LF + Q + ++++ L C
Sbjct: 473 EMFDQWPSNLDSSKATTSI-IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 408 SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVV 467
G + G ++ H G + ++ + ++ D+A K+ MR ++V+
Sbjct: 532 GTLGFREMGYQI-HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIF--NTMREHDVI 588
Query: 468 LGSLLAAC 475
+ L +C
Sbjct: 589 SWNSLISC 596
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 289/540 (53%), Gaps = 20/540 (3%)
Query: 44 FARQLFDKMVDKDAVSWS-TMIRNYGRNGLLDEALDLLRDMRVAR-VKPSEIAMISIIHV 101
+AR+LFD+ +D S +MI+ Y ++ L RD+R P ++
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 102 FAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
+ + + G LH + R C V ST ++DMY K + AR+ FD S V
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYV--STGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMR--REGVIPNEITILSLVKECGTVEALE-FGKLLH 218
SWT +I+GYI L+ +LF +M ++ VI N + + VK A F ++ H
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAM-MDGFVKSGDMTSARRLFDEMTH 204
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+V+ T I Y D +AR +FD++ ++L+ + MI Y Q
Sbjct: 205 K---------TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 279 EVFDIFVQMN-DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
E +F +M + P+++T++S+L + G+L +G+W H ++ ++ + + K+ T++
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
+DMY+KCG+I+ R+F ++ + WN MI G A+ G+ AAL+LFV M + P++
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDE 374
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
IT + + AC+H GL++EG++ FH M + GL K+EHYGCMVDLL RAG L EA+ LI
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 458 DMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGD 517
+MP PN ++L S L+AC +K+++ E + + LE G VL+ N+YAA+ +W D
Sbjct: 434 NMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDD 493
Query: 518 VSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGY 577
++ MR KE G S IE+N V EFI GD HP R I+ ++ ++ ++ Y
Sbjct: 494 FGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 180/377 (47%), Gaps = 17/377 (4%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D++V ++ MY + G + AR FD+M + VSW+ +I Y R G LD A L
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M VK I +++ F + D+ + L + V T++I Y
Sbjct: 168 DQM--PHVKDVVIYN-AMMDGFVKSGDMTSARRLFDEMT------HKTVITWTTMIHGYC 218
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PNEITIL 199
K++ AR +FD ++VSW TMI GY EGIRLF +M+ + P+++TIL
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
S++ AL G+ H F R + V + TA +DMY KCG+ A+ +FD + K
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWI 318
+ +AMI YA D+FV M +P+EITM++++ C G +E G KW
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWF 397
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD 377
H + + G+ + +VD+ + G + L + + ++ + +S C D
Sbjct: 398 H-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKD 456
Query: 378 GEAA---LELFVEMEAQ 391
E A L+ VE+E Q
Sbjct: 457 IERAERILKKAVELEPQ 473
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 160/345 (46%), Gaps = 13/345 (3%)
Query: 122 RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA--SIVSWTTMIAGYIHTNNLNEG 179
R+ ++ V + T + + + YAR +FD S +S +MI Y+ T +
Sbjct: 3 RHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDS 61
Query: 180 IRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
L+ +R+E P+ T +L K C + G LH+ R G + ++T +D
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 239 MYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
MY K G AR FD + ++ + +A+IS Y + +D +F QM + +
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVI 178
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
+++ K+G + + + + + + T+++ Y DID +LF A
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 359 DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGK 417
+R+++ WN MI G + + LF EM+A + P+D+T + L A S +G L G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 418 RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
H V L KV+ ++D+ S+ G +++A+++ +MP +
Sbjct: 295 -WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 182/647 (28%), Positives = 326/647 (50%), Gaps = 18/647 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G +V + +++ Y + +E A ++ + ++D W++++ + RN EA+
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
+MR ++P+ +I+ + + + L GK +H ++ G + + +L+DMY
Sbjct: 314 LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK---VGFEDSTDVGNALVDMY 370
Query: 140 VKCK-NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
+KC + A VF ++VSWTT+I G + + + L ++M + V PN +T+
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+++ C + + +HA+ LR + +V+ + +D Y A V S++
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+D + +++++ + + + + M GIR +++++ + A G+LE GK +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y K G + SLVDMY+KCG ++ ++F D++ WN ++SG A G
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFI 610
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+AL F EM + P+ +TF+ L ACS+ L G F M + + P+VEHY
Sbjct: 611 SSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVH 670
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
+V +L RAG L+EA ++ M ++PN ++ +LL AC+ N+ LGE A + L+L
Sbjct: 671 LVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSD 730
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH-PE 557
+L++++Y K R M + +SK+ G S++EV G VH F+ D +
Sbjct: 731 PALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDK 790
Query: 558 TRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGA 617
T IY + ++E++ G +P G E + +HS K A+ YG I +P A
Sbjct: 791 TNGIYAEIESIKEEIKRFG-SP--------YRGNENAS---FHSAKQAVVYGFIYASPEA 838
Query: 618 PIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEGSCSC 664
P+ +VKN +C D H +L+R+ ++I VRD N+ H FK G CSC
Sbjct: 839 PVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 13/449 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G ++ +CN ++ +Y + + AR+LFD+M + +W+ MI + ++ AL L
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLF 112
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+M + P+E S++ A L D+ G +HG V++ G S V +SL D+Y
Sbjct: 113 EEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV--GSSLSDLYS 170
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC A +F A +SWT MI+ + E ++ + +M + GV PNE T +
Sbjct: 171 KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK 230
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
L+ + LEFGK +H+ + GI ++VVL T+ +D Y + A V +S +D
Sbjct: 231 LLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + ++++S + + E F++M G++PN T ++L LC+ SL+ GK IHS
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDT-TYRLFAAATDRDILMWNVMISGCAMLGDGE 379
K G + T + +LVDMY KC + R+F A +++ W +I G G +
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY--- 436
L +EM + V PN +T G L+ACS L+ +R+ +H + L V+
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSK---LRHVRRVLE--IHAYLLRRHVDGEMVV 464
Query: 437 -GCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
+VD + + +D A +I M R N
Sbjct: 465 GNSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 35/386 (9%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
L +L+ +Y+K + AR +FD S ++ +WT MI+ + + + LF +M G
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
PNE T S+V+ C + + +G +H ++ G + V+ ++ D+Y KCG F+ A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+F S++N D + + MIS+ E + +M G+ PNE T V LL + G
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG 239
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
LE GK IHS I +GI + LKTSLVD Y++ ++ R+ ++ ++D+ +W ++S
Sbjct: 240 -LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH----- 425
G + A+ F+EM + G+ PN+ T+ L CS L GK++ + +
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 426 --DFG------------------------LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
D G + P V + ++ L G + + L+++M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 460 PMR---PNNVVLGSLLAACKLHKNVK 482
R PN V L +L AC ++V+
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVR 444
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 213/443 (48%), Gaps = 13/443 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF + V +++ +Y + G + A +LF + + D +SW+ MI + EAL
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ 211
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TS 134
+M A V P+E + ++ + + L+ GK +H ++ G+PL+ TS
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVR------GIPLNVVLKTS 264
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+D Y + + A V + + WT++++G++ E + F++MR G+ PN
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR-SARYVF 253
T +++ C V +L+FGK +H+ T++ G S + A +DMY KC A VF
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
++ + +++ + +I + + F + ++M + PN +T+ +L C+K +
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
IH+Y+ ++ + + + SLVD YA +D + + + RD + + +++
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
LG E AL + M G+ + ++ G + A ++ G L+ GK L H G
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-HCYSVKSGFSGAA 563
Query: 434 EHYGCMVDLLSRAGLLDEAQKLI 456
+VD+ S+ G L++A+K+
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVF 586
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQ 273
G +H ++ G+ ++ L + +Y K +AR +FD + ++ + + MISA+ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
+ +F +M G PNE T S++ CA + G +H + K G + ++ +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 334 KTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGV 393
+SL D+Y+KCG LF++ + D + W +MIS AL+ + EM GV
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 394 IPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
PN+ TF+ L A S GL E + H + G+ V +VD S+ +++A
Sbjct: 222 PPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 454 KLI 456
+++
Sbjct: 280 RVL 282
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 293 RPNEI-----TMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
R NE+ + + +L C ++ S +G IH + K G+ + L +L+ +Y K I
Sbjct: 16 RTNELGNLQKSCIRILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGI 74
Query: 348 DTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKAC 407
+LF + R + W VMIS + +AL LF EM A G PN+ TF +++C
Sbjct: 75 WNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Query: 408 SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
+ + G R+ H V G + DL S+ G EA +L
Sbjct: 135 AGLRDISYGGRV-HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++GF V N+++ MY + GSLE A+++F+++ D VSW+ ++ NG +
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFA--ELVDLKL 110
AL +MR+ +P + + ++ + L DL L
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL 649
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 296/539 (54%), Gaps = 11/539 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
C + G D V N++I MY + R++FD+M+ +D VS+ ++I + ++GLL E
Sbjct: 72 LCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYE 131
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAEL-VDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A+ L+++M P + S++ + + K+ + H V+ + Q V LST+
Sbjct: 132 AMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM-QESVLLSTA 190
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+DMY+K + A A VFD + VSWT MI+G + N G+ LF M+RE + PN
Sbjct: 191 LVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPN 250
Query: 195 EITILSLVKECGTVEALEFG----KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+T+LS++ C VE L +G K +H F+ R+G L AF+ MY +CG+ +R
Sbjct: 251 RVTLLSVLPAC--VE-LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSR 307
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+F++ + +D+++ S+MIS YA+T EV ++ QM GI N +T+++++ C +
Sbjct: 308 VLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
L +HS I K G L +L+DMYAKCG + +F T++D++ W+ MI+
Sbjct: 368 LLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
+ G G ALE+F M G +D+ F+ L AC+H+GL++E + +F + + +
Sbjct: 428 AYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMP 486
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKL-GEWAAG 489
+EHY C ++LL R G +D+A ++ I+MPM+P+ + SLL+AC+ H + + G+ A
Sbjct: 487 VTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIAN 546
Query: 490 QFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEF 548
+ + E VL+S I+ + ++RR M+ ++K G S IE + ++
Sbjct: 547 ELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 181/370 (48%), Gaps = 4/370 (1%)
Query: 9 ARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYG 68
AR A + V + A++ MY + A +FD+M K+ VSW+ MI
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 69 RNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAEL-VDLKLGKALHGYVMRNRNCGQS 127
N + +DL R M+ ++P+ + ++S++ EL L K +HG+ R+ C +
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRH-GC-HA 285
Query: 128 GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
L+ + + MY +C N++ +R +F+ +V W++MI+GY T + +E + L +MR
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+EG+ N +T+L++V C L F +H+ L+ G ++L A IDMY KCG
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+AR VF + KDL+ S+MI+AY E +IF M G +++ +++L C
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN 465
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL-FAAATDRDILMWN 366
AG +E + I + K + + +++ + G ID + + +W+
Sbjct: 466 HAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWS 525
Query: 367 VMISGCAMLG 376
++S C G
Sbjct: 526 SLLSACETHG 535
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL--SLVKECG-TVEALEFGKLLHAFTLR 223
+ G + +E +RL+ K++ + N T + S++K C E G LH L+
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
G V++ + I MY K + R VFD + ++D + ++I++ Q + E +
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAG-SLEMGKWIHSYI-DKQGIKRDTKLKTSLVDMY 341
+M G P + SLL LC + G S ++ + H+ + + ++ L T+LVDMY
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 342 AKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFI 401
K D + +F ++ + W MISGC + E ++LF M+ + + PN +T +
Sbjct: 196 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLL 255
Query: 402 GALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
L AC L G L K +H F +GC D
Sbjct: 256 SVLPACVE---LNYGSSLV-KEIHGFSF-----RHGCHAD 286
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 286/523 (54%), Gaps = 11/523 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++G D V NA+I Y + L A LF +M DK VSW+TMI Y ++GL +EA+
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ-SGVPLSTSLID 137
+ ++M V EI+ ++II++ + V + LH V++ CG + + + TSL+
Sbjct: 239 VFKNMFEKNV---EISPVTIINLLSAHVS---HEPLHCLVVK---CGMVNDISVVTSLVC 289
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
Y +C L A ++ SIV T++++ Y +++ + F K R+ + + +
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++ ++ C ++ G LH + +++G+ ++ I MY K D + ++F+ ++
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMN-DCGIRPNEITMVSLLVLCAKAGSLEMGK 316
L+ +++IS Q+ F++F QM G+ P+ IT+ SLL C++ L +GK
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK 469
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLG 376
+H Y + + + + T+L+DMYAKCG+ +F + WN MISG ++ G
Sbjct: 470 ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
AL ++EM +G+ P++ITF+G L AC+H G + EGK F M+ +FG+ P ++HY
Sbjct: 530 LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHY 589
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
MV LL RA L EA LI M ++P++ V G+LL+AC +H+ +++GE+ A + L+
Sbjct: 590 ALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDY 649
Query: 497 HKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
G VLMSN+YA E W DV +R M+D G GVS I
Sbjct: 650 KNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 213/437 (48%), Gaps = 24/437 (5%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++G R V+V +++ +Y + G + A+ LFD+M ++D V W+ +I Y RNG +A
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST----S 134
L M PS +++++ + + G+++HG +SG+ L + +
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVA------AKSGLELDSQVKNA 191
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LI Y KC L A +F S VSW TMI Y + E I +F M + V +
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+TI++L+ + E LH ++ G+ + + T+ + Y +CG SA ++
Sbjct: 252 PVTIINLLSAHVSHEP------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
S + ++ ++++S YA+ +D F + ++ + + +V +L C K+ +++
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G +H Y K G+ T + L+ MY+K D++T LF + ++ WN +ISGC
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425
Query: 375 LGDGEAALELFVEME-AQGVIPNDITFIGALKACSHSGLLQEGKRLF-HKMVHDFGLVPK 432
G A E+F +M G++P+ IT L CS L GK L + + ++F +
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----E 481
Query: 433 VEHYGC--MVDLLSRAG 447
E++ C ++D+ ++ G
Sbjct: 482 NENFVCTALIDMYAKCG 498
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 13/295 (4%)
Query: 165 TMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFG---KLLHAFT 221
+++ IH + I +F + R + PN T +S+ + T F + +
Sbjct: 18 SLLKSCIHGEISSSPITIFRDLLRSSLTPNHFT-MSIFLQATTTSFNSFKLQVEQVQTHL 76
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
++G+ V + T+ +++Y K G SA+ +FD + +D ++ +A+I Y++ + +
Sbjct: 77 TKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAW 136
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
+F+ M G P+ T+V+LL C + G + G+ +H K G++ D+++K +L+ Y
Sbjct: 137 KLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFY 196
Query: 342 AKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFI 401
+KC ++ + LF D+ + WN MI + G E A+ +F M + V + +T I
Sbjct: 197 SKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 256
Query: 402 GALKA-CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL 455
L A SH L H +V G+V + +V SR G L A++L
Sbjct: 257 NLLSAHVSHEPL--------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 242/445 (54%), Gaps = 35/445 (7%)
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG--TVEALEF 213
+ + VSWT+ I L E + F M GV PN IT ++L+ CG T +
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 214 GKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENK------------- 259
G LLH + + G+ + V++ TA I MY K G F+ AR VFD +E+K
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 260 ------------------DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVS 301
DL+ +AMI+ + + +E F +M G++P+ + +++
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L C G+L G W+H Y+ Q K + ++ SL+D+Y +CG ++ ++F R
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
++ WN +I G A G+ +L F +M+ +G P+ +TF GAL ACSH GL++EG R F
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH-KN 480
M D+ + P++EHYGC+VDL SRAG L++A KL+ MPM+PN VV+GSLLAAC H N
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 481 VKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
+ L E L V++SN+YAA+ KW S +RR M+ G+ K+PG SSIE
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
Query: 541 VNGSVHEFIMGDREHPETRRIYEIV 565
++ +H F+ GD H ET I E++
Sbjct: 452 IDDCMHVFMAGDNAHVETTYIREVL 476
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 35/341 (10%)
Query: 47 QLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELV 106
Q ++ + VSW++ I RNG L EA DM +A V+P+ I I+++ +
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 107 D--LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWT 164
LG LHGY + ++ V + T++I MY K AR VFD + V+W
Sbjct: 86 SGSEALGDLLHGYACK-LGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 165 TMIAGYIHTNNLNEGIRLFVKMR---------------------------RE----GVIP 193
TMI GY+ + ++ ++F KM RE GV P
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+ + I++ + C + AL FG +H + L +V ++ + ID+Y +CG AR VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
++E + ++ +++I +A E F +M + G +P+ +T L C+ G +E
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 314 MG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
G ++ I + LVD+Y++ G ++ +L
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 161/352 (45%), Gaps = 12/352 (3%)
Query: 9 ARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYG 68
R + AR + ++ N +I Y G ++ A ++FDKM ++D +SW+ MI +
Sbjct: 123 GRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV 182
Query: 69 RNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG 128
+ G +EAL R+M+++ VKP +A+I+ ++ L L G +H YV+ ++
Sbjct: 183 KKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD--FKNN 240
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
V +S SLID+Y +C + +AR VF ++VSW ++I G+ N +E + F KM+
Sbjct: 241 VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 189 EGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+G P+ +T + C V +E G + I+ + +D+Y + G
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 248 SARYVFDSIENK--DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVL 305
A + S+ K +++I S + + N I + + D ++ + V L +
Sbjct: 361 DALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHS-NYVILSNM 419
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD------MYAKCGDIDTTY 351
A G E + + G+K+ + +D M ++TTY
Sbjct: 420 YAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTY 471
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 286/523 (54%), Gaps = 7/523 (1%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NGF ++ + + +I +Y + G ++ AR+LFD++ +D VSW+ MI + R G +AL L
Sbjct: 41 NGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLL 100
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
++M VK ++ S++ +L LK G +HG V + NC + + ++L+ +Y
Sbjct: 101 FKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG-NCA-GNLIVRSALLSLY 158
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+C + AR FD +VSW MI GY + LF M EG P+ T
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
SL++ V+ LE LH ++ G S L + ++ Y KCG +A + + + +
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 260 DLMICSAMISAYAQ-TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
DL+ C+A+I+ ++Q NC + FDIF M + +E+ + S+L +C S+ +G+ I
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQI 338
Query: 319 HSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
H + K I+ D L SL+DMYAK G+I+ F ++D+ W +I+G G+
Sbjct: 339 HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN 398
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E A++L+ ME + + PND+TF+ L ACSH+G + G +++ M++ G+ + EH
Sbjct: 399 FEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLS 458
Query: 438 CMVDLLSRAGLLDEAQKLIIDMP--MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
C++D+L+R+G L+EA LI + ++ G+ L AC+ H NV+L + AA Q LS+E
Sbjct: 459 CIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSME 518
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG-ISKEPGVS 537
K + ++++YAA W + + R+ M+++G +K PG S
Sbjct: 519 PRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 47/411 (11%)
Query: 114 LHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
+HG + N C S + L LID+Y+K ++ +AR +FD S +VSWT MI+ +
Sbjct: 34 IHGNSITNGFC--SNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC 91
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
+ + LF +M RE V N+ T S++K C + L+ G +H + ++++
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
+A + +Y +CG AR FDS++ +DL+ +AMI Y C D F +F M G +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
P+ T SLL LE+ +H K G R + L SLV+ Y KCG + ++L
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEA-ALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
RD+L +I+G + + + A ++F +M +++ LK C+
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHY-----GCMVDLLSRAGLLDEAQKLIIDMP------- 460
+ G++ +H F L + ++D+ +++G +++A +M
Sbjct: 332 VTIGRQ-----IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 386
Query: 461 ---------------------------MRPNNVVLGSLLAACKLHKNVKLG 484
++PN+V SLL+AC +LG
Sbjct: 387 TSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%)
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTN 275
L+H ++ NG ++ L ID+Y K GD + AR +FD I +D++ +AMIS +++
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
+ +F +M+ ++ N+ T S+L C G L+ G IH ++K + +++
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 336 SLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
+L+ +YA+CG ++ F + +RD++ WN MI G + + LF M +G P
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 396 NDITFIGALKA 406
+ TF L+A
Sbjct: 213 DCFTFGSLLRA 223
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
L LC+ + IH G + +LK L+D+Y K GD+ +LF + RD+
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+ W MIS + G AL LF EM + V N T+ LK+C G L+EG ++ H
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI-HG 137
Query: 423 MVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP----NNVVLGSLLAAC 475
V + ++ L +R G ++EA+ M R N ++ G AC
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 288/577 (49%), Gaps = 68/577 (11%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
RD + N ++ + + G L AR+LF+ M +KD V+ ++++ Y NG +EAL L ++
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
+ + I + +++ AEL LK GK +H ++ + +++SL+++Y KC
Sbjct: 181 LNFS---ADAITLTTVLKACAELEALKCGKQIHAQILIGG--VECDSKMNSSLVNVYAKC 235
Query: 143 KNLAYA-------------------------------RSVFDGFSGASIVSWTTMIAGYI 171
+L A R +FD S ++ W +MI+GYI
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
N E + LF +MR E + T+ +++ C + LE GK +H + G+ +V
Sbjct: 296 ANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 232 LATAFIDMYGKCGD-------------------------------FRSARYVFDSIENKD 260
+A+ +DMY KCG A+ VF+ IENK
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
L+ ++M + ++Q C E + F QM+ + +E+++ S++ CA SLE+G+ + +
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
G+ D + +SL+D+Y KCG ++ R+F D + WN MISG A G G
Sbjct: 475 RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFE 534
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
A++LF +M G+ P ITF+ L AC++ GL++EG++LF M D G VP EH+ CMV
Sbjct: 535 AIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMV 594
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG 500
DLL+RAG ++EA L+ +MP + + S+L C + +G+ AA + + LE
Sbjct: 595 DLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSV 654
Query: 501 YNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
V +S I+A W + +R+ MR+ ++K PG S
Sbjct: 655 AYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 187/417 (44%), Gaps = 35/417 (8%)
Query: 12 RGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNG 71
R A + E D +A+I Y G + +R LFD+ ++ + W++MI Y N
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 72 LLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMR----------- 120
+ EAL L +MR + + ++I+ L L+ GK +H + +
Sbjct: 299 MKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 121 -----NRNCGQS-------------GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVS 162
CG L S+I +Y C + A+ VF+ S++S
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 163 WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTL 222
W +M G+ E + F +M + + +E+++ S++ C ++ +LE G+ + A
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFD 282
G+ V++++ ID+Y KCG R VFD++ D + ++MIS YA E D
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMY 341
+F +M+ GIRP +IT + +L C G +E G K S G D + + +VD+
Sbjct: 538 LFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLL 597
Query: 342 AKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVI 394
A+ G ++ L D D MW+ ++ GC G G+ A E +E+E + +
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSV 654
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 285/542 (52%), Gaps = 15/542 (2%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
+++ MY + G + A +F ++D ++ +I + NG +A++ R+MR +
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMR---NRNCGQSGVPLSTSLIDMYVKCKNLA 146
P + S++ ++ ++L K +HG + + +C + + L+ Y K ++
Sbjct: 159 PDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDC-----YVGSGLVTSYSKFMSVE 212
Query: 147 YARSVFDGFSGAS-IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
A+ VFD V W ++ GY + + +F KMR EGV + TI S++
Sbjct: 213 DAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAF 272
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICS 265
++ G+ +H ++ G +V++ A IDMYGK A +F++++ +DL +
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
+++ + D +F +M GIRP+ +T+ ++L C + SL G+ IH Y+
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 326 GI----KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
G+ + + SL+DMY KCGD+ +F + +D WN+MI+G + GE A
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELA 452
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
L++F M GV P++ITF+G L+ACSHSG L EG+ +M + ++P +HY C++D
Sbjct: 453 LDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVID 512
Query: 442 LLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY 501
+L RA L+EA +L I P+ N VV S+L++C+LH N L A + LE CG
Sbjct: 513 MLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGG 572
Query: 502 NVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRI 561
VLMSN+Y K+ +V D+R AMR + K PG S I + VH F G++ HPE + I
Sbjct: 573 YVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSI 632
Query: 562 YE 563
++
Sbjct: 633 HD 634
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 195/369 (52%), Gaps = 9/369 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDL 79
GF D +V + ++ Y + S+E A+++FD++ D+ D+V W+ ++ Y + ++AL +
Sbjct: 190 GFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLV 249
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
MR V S + S++ F D+ G+++HG ++ + S + +S +LIDMY
Sbjct: 250 FSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS--GSDIVVSNALIDMY 307
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
K K L A S+F+ + +W +++ + + + + + LF +M G+ P+ +T+
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLT 367
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGI----TISVVLATAFIDMYGKCGDFRSARYVFDS 255
+++ CG + +L G+ +H + + +G+ + + + + +DMY KCGD R AR VFDS
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDS 427
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ KD + MI+ Y +C + D+F M G++P+EIT V LL C+ +G L G
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Query: 316 KWIHSYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD-ILMWNVMISGCA 373
+ + ++ I + ++DM + ++ Y L + D ++W ++S C
Sbjct: 488 RNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCR 547
Query: 374 MLGDGEAAL 382
+ G+ + AL
Sbjct: 548 LHGNKDLAL 556
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 177/371 (47%), Gaps = 7/371 (1%)
Query: 96 ISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGF 155
I+ + A+ D G+ +HG+++R S TSL++MY KC + A VF G
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRA-GTSLVNMYAKCGLMRRAVLVFGG- 121
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
S + + +I+G++ + + + + +MR G++P++ T SL+K +E + K
Sbjct: 122 SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKK 181
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMISAYAQT 274
+H + G + + + Y K A+ VFD + ++ D ++ +A+++ Y+Q
Sbjct: 182 -VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
++ +F +M + G+ + T+ S+L +G ++ G+ IH K G D +
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+L+DMY K ++ +F A +RD+ WN ++ GD + L LF M G+
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH---YGCMVDLLSRAGLLDE 451
P+ +T L C L++G+ + M+ L K + + ++D+ + G L +
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 452 AQKLIIDMPMR 462
A+ + M ++
Sbjct: 421 ARMVFDSMRVK 431
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G D+ V NA+I MYG+ LE A +F+ M ++D +W++++ + G D L
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR--NCGQSGVPLSTSLI 136
L M + ++P + + +++ L L+ G+ +HGY++ + N S + SL+
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
DMYVKC +L AR VFD SW MI GY + + +F M R GV P+EI
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI 469
Query: 197 TILSLVKECGTVEALEFGK--LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
T + L++ C L G+ L T+ N + S A IDM G+ A
Sbjct: 470 TFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV-IDMLGRADKLEEA 523
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYV 252
N T ++ ++ C + G+ +H F +R G + S T+ ++MY KCG R A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F E +D+ +A+IS + + + + +M GI P++ T SLL + A L
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMEL 176
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISG 371
K +H K G D + + LV Y+K ++ ++F DR D ++WN +++G
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
+ + E AL +F +M +GV + T L A + SG + G+ + H + G
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGS 295
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
+ ++D+ ++ L+EA + M R
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDER 326
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 288/556 (51%), Gaps = 14/556 (2%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
H D+ + +I A ++F+++ + + +++IR + +N +A +
Sbjct: 47 LHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFS 106
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
+M+ + ++ + L + K +H ++ + VP +LID Y +
Sbjct: 107 EMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP--NALIDCYSR 164
Query: 142 CKNLAY--ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
C L A +F+ S VSW +M+ G + L + RLF +M + +I T+L
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN-TML 223
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD--SIE 257
C E + +L RN ++ S ++ Y K GD AR +FD +
Sbjct: 224 DGYARCR--EMSKAFELFEKMPERNTVSWSTMVMG-----YSKAGDMEMARVMFDKMPLP 276
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
K+++ + +I+ YA+ + E + QM G++ + ++S+L C ++G L +G
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR 336
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
IHS + + + + + +L+DMYAKCG++ + +F +D++ WN M+ G + G
Sbjct: 337 IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGH 396
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
G+ A+ELF M +G+ P+ +TFI L +C+H+GL+ EG F+ M + LVP+VEHYG
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
C+VDLL R G L EA K++ MPM PN V+ G+LL AC++H V + + + L+
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPC 516
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPE 557
G L+SNIYAA W V+DIR M+ G+ K G SS+E+ +HEF + D+ HP+
Sbjct: 517 DPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPK 576
Query: 558 TRRIYEIVAEMREKLD 573
+ +IY+++ + E D
Sbjct: 577 SDQIYQMLGSLIEPPD 592
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 18/372 (4%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEF--ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
G D++V NA+I Y G L A +LF+KM ++D VSW++M+ + G L +A
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGY-VMRNRNCGQSGVPLSTSLID 137
L +M + I+ +++ +A + + KA + M RN V ST ++
Sbjct: 207 LFDEMPQRDL----ISWNTMLDGYARCRE--MSKAFELFEKMPERNT----VSWSTMVMG 256
Query: 138 MYVKCKNLAYARSVFD--GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
Y K ++ AR +FD ++V+WT +IAGY L E RL +M G+ +
Sbjct: 257 -YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
++S++ C L G +H+ R+ + + + A +DMY KCG+ + A VF+
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
I KDL+ + M+ E ++F +M GIRP+++T +++L C AG ++ G
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 316 -KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCA 373
+ +S + + LVD+ + G + ++ + ++++W ++ C
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 374 MLGDGEAALELF 385
M + + A E+
Sbjct: 496 MHNEVDIAKEVL 507
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
K LHA +R + + +A I C A VF+ ++ ++ +C+++I A+AQ
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
+ + F +F +M G+ + T LL C+ L + K +H++I+K G+ D +
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 335 TSLVDMYAKCGDIDT--TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG 392
+L+D Y++CG + +LF ++RD + WN M+ G G+ A LF EM +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 393 VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
+I + T + C + + LF KM + MV S+AG ++ A
Sbjct: 216 LISWN-TMLDGYARCRE---MSKAFELFEKMPER-----NTVSWSTMVMGYSKAGDMEMA 266
Query: 453 QKLIIDMPMRPNNVVLGSLLAA 474
+ + MP+ NVV +++ A
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIA 288
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
K +L K +H+ I ++ + D + L+ + C + R+F + ++ + N
Sbjct: 27 PKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCN 86
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
+I A A +F EM+ G+ ++ T+ LKACS L K + H +
Sbjct: 87 SLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVK-MMHNHIEK 145
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLD--EAQKLIIDMPMRPN---NVVLGSLLAACKLHKNV 481
GL + ++D SR G L +A KL M R N +LG L+ A +L
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 482 KL 483
+L
Sbjct: 206 RL 207
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 301/557 (54%), Gaps = 14/557 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ +V V +++ MY G LE AR++FD + ++DAV+W+TMI +N +++ L
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
R+M ++ V P++ +++ ++L LGK +H ++ + + +PL +L+DMY
Sbjct: 289 RNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD--LPLDNALLDMYC 346
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK--MRREGVIPNEITI 198
C ++ A VF ++VSW ++I+G N E L + +R P+E T
Sbjct: 347 SCGDMREAFYVFGRIHNPNLVSWNSIISG-CSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+ + E GKLLH + G SV + T + MY K + SA+ VFD ++
Sbjct: 406 SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE 465
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+D+++ + MI +++ + F++M R + ++ S++ C+ L G+
Sbjct: 466 RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVF 525
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + G + +LVDMY K G +T +F+ A++ D+ WN M+ + G
Sbjct: 526 HCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMV 585
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
E AL F ++ G +P+ +T++ L ACSH G +GK L+++M + G+ +HY C
Sbjct: 586 EKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSC 644
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG-SLLAACKLHKNVKLGEWAAGQFLSLESH 497
MV+L+S+AGL+DEA +LI P N L +LL+AC +N+++G +AA Q L L+
Sbjct: 645 MVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPE 704
Query: 498 KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV-NGSVHEFIMGDREHP 556
++L+SN+YA +W DV+++RR +R SK+PG+S IEV N + F GD+ +P
Sbjct: 705 DTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Query: 557 ETRRIYEIVAEMREKLD 573
E+V++ +++L+
Sbjct: 765 ------EVVSQAQDELN 775
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 215/451 (47%), Gaps = 12/451 (2%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSW---STMIRNYGRNGLLDEALDLLRDM 83
+ N +I MY SLE AR++FDKM ++ V+ S + L + L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 84 RVARVKP-SEIA--MISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS-LIDMY 139
++ P +EIA ++ + + LK + +H V+ + P + + LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL-NEGIRLFVKMRREGVIPNEITI 198
V+C +L AR VFD ++VS+ + + Y + + L M E V PN T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
SLV+ C +E + G L++ ++ G + +VV+ T+ + MY CGD SAR +FD + N
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+D + + MI + + I++ F M G+ P + T +L C+K GS +GK I
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H+ I D L +L+DMY CGD+ + +F + +++ WN +ISGC+ G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 379 EAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E A+ ++ + P++ TF A+ A + GK L H V G V
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK-LLHGQVTKLGYERSVFVGT 441
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVL 468
++ + + + AQK + D+ M+ +VVL
Sbjct: 442 TLLSMYFKNREAESAQK-VFDV-MKERDVVL 470
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 168/354 (47%), Gaps = 12/354 (3%)
Query: 132 STSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT---NNLNEGIRLFVKMRR 188
+ +LI MYV+C +L AR VFD +IV+ + A + + ++L+ I +
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 189 EGVIP-NEI--TILSLVKECGTVEALEFGKLLHAFTLRNG---ITISVVLATAFIDMYGK 242
+P NEI +++ L ++C ++ L+ + +HA L G T S I MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 243 CGDFRSARYVFDSIENKDLMICSAMISAYAQT-NCIDEVFDIFVQMNDCGIRPNEITMVS 301
CG AR VFD + +++++ +A+ SAY++ + F + M ++PN T S
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L+ +CA + MG ++S I K G + ++TS++ MY+ CGD+++ R+F +RD
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
+ WN MI G E L F M GV P T+ L CS G GK L H
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK-LIH 323
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC 475
+ + + ++D+ G + EA + PN V S+++ C
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREA-FYVFGRIHNPNLVSWNSIISGC 376
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 282/594 (47%), Gaps = 43/594 (7%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD-- 82
D F+ + +I Y A +FD++ ++A S++ ++ Y + +A L
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 83 ----MRVARVKPSEIAMISIIHVFAELVDLKLG---KALHGYVMRNRNCGQSGVPLSTSL 135
+P I++ ++ + D LG + +HG+V+R S V + +
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF--DSDVFVGNGM 173
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPN 194
I Y KC N+ AR VFD S +VSW +MI+GY + + + +++ M PN
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
+T++S+ + CG L FG +H + N I + + L A I Y KCG AR +FD
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 255 SIENKD-------------------------------LMICSAMISAYAQTNCIDEVFDI 283
+ KD L +AMIS Q N +EV +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
F +M CG RPN +T+ SLL + +L+ GK IH++ + G + + TS++D YAK
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 344 CGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGA 403
G + R+F DR ++ W +I+ A+ GD ++A LF +M+ G P+D+T
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 404 LKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP 463
L A +HSG + +F M+ + + P VEHY CMV +LSRAG L +A + I MP+ P
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 464 NNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRR 523
V G+LL + ++++ +A + +E G +M+N+Y +W + +R
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 524 AMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGY 577
M+ G+ K PG S IE + FI D ++ +YEI+ + E + + Y
Sbjct: 594 KMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 217/445 (48%), Gaps = 43/445 (9%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F GF DVFV N +I Y + ++E AR++FD+M ++D VSW++MI Y ++G ++
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 76 ALDLLRDMRV-ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+ + M + KP+ + +IS+ + DL G +H ++ N Q + L +
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHI--QMDLSLCNA 274
Query: 135 LIDMYVKCKNLAYARSVFDGFS-------GASIV------------------------SW 163
+I Y KC +L YAR++FD S GA I +W
Sbjct: 275 VIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTW 334
Query: 164 TTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
MI+G + N+ E I F +M R G PN +T+ SL+ L+ GK +HAF +R
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
NG ++ + T+ ID Y K G A+ VFD+ +++ L+ +A+I+AYA D +
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH-SYIDKQGIKRDTKLKTSLVDMYA 342
F QM G +P+++T+ ++L A +G +M + I S + K I+ + +V + +
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLS 514
Query: 343 KCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEA---ALELFVEMEAQGVIPNDI 398
+ G + + D +W +++G ++LGD E A + EME + +
Sbjct: 515 RAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT--GNY 572
Query: 399 TFIGALKACSHSGLLQEGKRLFHKM 423
T + L + +G +E + + +KM
Sbjct: 573 TIMANLY--TQAGRWEEAEMVRNKM 595
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
LHA + I LA+ I Y + FR A +VFD I ++ +A++ AY
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 277 IDEVFDIFVQM--NDC----GIRPNEITMVSLLVLCAKAGSLEMG---KWIHSYIDKQGI 327
+ F +F+ + C RP+ I++ +L + +G + +H ++ + G
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
D + ++ Y KC +I++ ++F ++RD++ WN MISG + G E +++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 388 MEA-QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRA 446
M A PN +T I +AC S L G + KM+ + + + ++ ++
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKC 282
Query: 447 GLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK 482
G LD A+ L +M + ++V G++++ H VK
Sbjct: 283 GSLDYARALFDEMSEK-DSVTYGAIISGYMAHGLVK 317
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 272/526 (51%), Gaps = 45/526 (8%)
Query: 16 FCCENGFHRDVFVCNAIIMMYG---EVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGL 72
F + G D F + ++ E ++ +A + +++ + + +++IR Y +
Sbjct: 61 FMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSST 120
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
+ AL + R+M + V P + + ++ A + G+ +HG +++ + V +
Sbjct: 121 PEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV--TDVFVE 178
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
+L+++Y + AR V D VSW ++++ Y+ ++E LF +M
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM------ 232
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
E VE+ F I Y G + A+ V
Sbjct: 233 -----------EERNVESWNF----------------------MISGYAAAGLVKEAKEV 259
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGS 311
FDS+ +D++ +AM++AYA C +EV ++F +M +D +P+ T+VS+L CA GS
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
L G+W+H YIDK GI+ + L T+LVDMY+KCG ID +F A + RD+ WN +IS
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISD 379
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
++ G G+ ALE+F EM +G PN ITFIG L AC+H G+L + ++LF M + + P
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
+EHYGCMVDLL R G ++EA++L+ ++P +++L SLL ACK ++ E A +
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRL 499
Query: 492 LSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
L L MSN+YA++ +W V D RR MR +++ V+
Sbjct: 500 LELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSLDVA 545
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
KD+ +C+ +I N + +M+ C P V +L +A SL +
Sbjct: 4 KDIYMCAEIIIRPQAYNLRLLQKENLKKMSVCSSTP-----VPILSFTERAKSLTEIQQA 58
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT---TYRLFAAATDRDILMWNVMISGCAML 375
H+++ K G+ DT + LV A + T + + + N +I A
Sbjct: 59 HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANS 118
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
E AL +F EM V P+ +F LKAC+ +EG+++ H + GLV V
Sbjct: 119 STPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI-HGLFIKSGLVTDVFV 177
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
+V++ R+G + A+K++ MP+R + V SLL+A
Sbjct: 178 ENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA 215
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 244/466 (52%), Gaps = 39/466 (8%)
Query: 142 CKN---LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNE---GIRLFVKMRREGVIPNE 195
C N L YA SVF + TMI + N I ++ K+ P+
Sbjct: 57 CSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDT 116
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T ++K V + FG+ +H + G SV + T I MY CG AR +FD
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 256 IENKDLMICSAM---------------------------------ISAYAQTNCIDEVFD 282
+ KD+ + +A+ IS YA++ E +
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+F +M + P+E+T++++L CA GSLE+G+ I SY+D +G+ R L +++DMYA
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 343 KCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIG 402
K G+I +F +R+++ W +I+G A G G AL +F M GV PND+TFI
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIA 356
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L ACSH G + GKRLF+ M +G+ P +EHYGCM+DLL RAG L EA ++I MP +
Sbjct: 357 ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFK 416
Query: 463 PNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIR 522
N + GSLLAA +H +++LGE A + + LE + G +L++N+Y+ +W + +R
Sbjct: 417 ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMR 476
Query: 523 RAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEM 568
M+ G+ K G SSIEV V++FI GD HP+ RI+EI+ EM
Sbjct: 477 NMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 187/421 (44%), Gaps = 54/421 (12%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE----- 75
G +RD I G L +A +F + +TMIR LLDE
Sbjct: 42 GLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALS---LLDEPNAHS 98
Query: 76 -ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A+ + R + KP ++ + + D+ G+ +HG V+ S V + T
Sbjct: 99 IAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF--GFDSSVHVVTG 156
Query: 135 LIDMYVKCKNLAYARSVFD---------------GFSGA------------------SIV 161
LI MY C L AR +FD G+ + V
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
SWT +I+GY + +E I +F +M E V P+E+T+L+++ C + +LE G+ + ++
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
G+ +V L A IDMY K G+ A VF+ + ++++ + +I+ A E
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI-HSYIDKQGIKRDTKLKTSLVDM 340
+F +M G+RPN++T +++L C+ G +++GK + +S K GI + + ++D+
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 341 YAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIPN 396
+ G + + + + + +W +++ + D GE AL +++E PN
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLE-----PN 451
Query: 397 D 397
+
Sbjct: 452 N 452
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 279/527 (52%), Gaps = 16/527 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ + G DV V +++ MY + G LE A QLF + D+D VSWS MI +Y + G DE
Sbjct: 325 YAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE 384
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L RDM +KP+ + + S++ A + +LGK++H Y ++ +S + +T++
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI--ESELETATAV 442
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I MY KC + A F+ V++ + GY + N+ ++ M+ GV P+
Sbjct: 443 ISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T++ +++ C G ++ +++G +A A I+M+ KC +A +FD
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 256 IE-NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
K + + M++ Y +E F QM +PN +T V+++ A+ +L +
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G +HS + + G T + SLVDMYAKCG I+++ + F +++ I+ WN M+S A
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA 682
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G A+ LF+ M+ + P+ ++F+ L AC H+GL++EGKR+F +M + +VE
Sbjct: 683 HGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE 742
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSL 494
HY CMVDLL +AGL EA +++ M ++ + V G+LL + ++H N+ L A Q + L
Sbjct: 743 HYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKL 802
Query: 495 ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
E L + Y+ + + G+V+++ R I K P S IEV
Sbjct: 803 EP-------LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 220/435 (50%), Gaps = 7/435 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
E G DV++ A++ MY + L ARQ+FDKM KD V+W+TM+ +NG AL
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L DMR V +++ ++I ++L + + LHG V++ S+ LIDM
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI----FAFSSGLIDM 243
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y C +L A SVF+ SW TM+A Y H E + LF MR V N++
Sbjct: 244 YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAA 303
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
S ++ V L G +H + ++ G+ V +AT+ + MY KCG+ A +F +IE+
Sbjct: 304 ASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED 363
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
+D++ SAMI++Y Q DE +F M I+PN +T+ S+L CA + +GK I
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y K I+ + + T+++ MYAKCG + F +D + +N + G +GD
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA 483
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV-HDFGLVPKVEHYG 437
A +++ M+ GV P+ T +G L+ C+ G ++ +++ H F V H
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH-- 541
Query: 438 CMVDLLSRAGLLDEA 452
++++ ++ L A
Sbjct: 542 ALINMFTKCDALAAA 556
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 208/434 (47%), Gaps = 6/434 (1%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR-V 88
N +I Y + +R +FD + D V W++MIR Y R GL EAL M + +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYA 148
P + + + A +D K G +H + +S V + T+L++MY K ++L A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL--ESDVYIGTALVEMYCKARDLVSA 154
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
R VFD +V+W TM++G + + LF MR V + +++ +L+ +
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
E + + LH ++ G + ++ IDMY C D +A VF+ + KD M+
Sbjct: 215 EKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
+AYA +EV ++F M + +R N++ S L A G L G IH Y +QG+
Sbjct: 273 AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI 332
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
D + TSL+ MY+KCG+++ +LF DRD++ W+ MI+ G + A+ LF +M
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
+ PN +T L+ C+ + GK + H + ++E ++ + ++ G
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIESELETATAVISMYAKCGR 451
Query: 449 LDEAQKLIIDMPMR 462
A K +P++
Sbjct: 452 FSPALKAFERLPIK 465
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 154/341 (45%), Gaps = 12/341 (3%)
Query: 127 SGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
SG+ LI+ Y + +R +FD +V W +MI GY E + F M
Sbjct: 31 SGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYM 90
Query: 187 RRE-GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
E G+ P++ + +K C + G +H G+ V + TA ++MY K D
Sbjct: 91 SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARD 150
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVL 305
SAR VFD + KD++ + M+S AQ C +F M C + + +++ +L+
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMW 365
+K ++ + +H + K+G + L+DMY C D+ +F +D W
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSW 268
Query: 366 NVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
M++ A G E LELF M V N + AL+A ++ G L +G +H
Sbjct: 269 GTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKG-----IAIH 323
Query: 426 DF----GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
D+ GL+ V ++ + S+ G L+ A++L I++ R
Sbjct: 324 DYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/604 (29%), Positives = 285/604 (47%), Gaps = 71/604 (11%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G + ARQ+FD M + D V+W+TM+ +Y R GL EA+ L +R + KP + + +I+
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVF------- 152
A L ++K G+ + V+R+ C + +P++ SLIDMY KC + A VF
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFC--ASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 153 ----------------DGFSGASIV----------SWTTMIAGYIHTNNLNEGIRLFVKM 186
+ F A V +W MI+G+ H L + LF +M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 187 RREGVIPNEITILSLVKECGTVEA-LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
P+ T SL+ C + + +G+++HA L+NG + +V + + Y K G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 246 FRSARYVFDSIE-------------------------------NKDLMICSAMISAYAQT 274
A +SIE K+++ + MI+ Y +
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
++ FV+M G+ + ++L C+ L GK IH + G + +
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+LV++YAKCGDI R F ++D++ WN M+ + G + AL+L+ M A G+
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
P+++TFIG L CSHSGL++EG +F MV D+ + +V+H CM+D+ R G L EA+
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 455 LIIDMPM----RPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYA 510
L NN +LL AC H + +LG + E + VL+SN+Y
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYC 555
Query: 511 AENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMRE 570
+ +W + D+RR M + G+ K PG S IEV V F++GD HP + E + ++
Sbjct: 556 STGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQH 615
Query: 571 KLDN 574
++ N
Sbjct: 616 EMRN 619
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 166/392 (42%), Gaps = 66/392 (16%)
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
TS I K +A AR VFDG V+W TM+ Y E I LF ++R
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P++ + +++ C ++ ++FG+ + + +R+G S+ + + IDMYGKC D SA V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 253 FDSI--ENKDLMICSAMISAYAQTNCIDEVFDIFVQMND---------------CG---- 291
F + ++++ + +++ AY + D+FV+M CG
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 292 ------------IRPNEITMVSLLVLC-AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
+P+ T SL+ C A + ++ G+ +H+ + K G + K S++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 339 DMYAKCGDIDTTYR-------------------------------LFAAATDRDILMWNV 367
Y K G D R +F A +++I+ W
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
MI+G GDGE AL FVEM GV + + L ACS LL GK + ++H
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH-C 366
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
G +V+L ++ G + EA + D+
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%), Gaps = 5/223 (2%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
N+II ++G E A ++F +K+ V+W+TMI YGRNG ++AL +M + V
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTSLIDMYVKCKNLAYA 148
A +++H + L L GK +HG ++ +CG G + +L+++Y KC ++ A
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLI---HCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 149 RSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
F + +VSW TM+ + ++ ++L+ M G+ P+ +T + L+ C
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 209 EALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSAR 250
+E G ++ +++ I + V T IDM+G+ G A+
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND 289
+V T+ I K G SAR VFD + D + + M+++Y++ E +F Q+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
+P++ + ++L CA G+++ G+ I S + + G + SL+DMY KC D +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 350 TYRL--------------------------FAAATD-------RDILMWNVMISGCAMLG 376
++ F AA D R WN+MISG A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
E+ L LF EM P+ TF + ACS R+ H ++ G VE
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGE 485
++ ++ G D+A + + + + V S++ AC +K+GE
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVL-TQVSWNSIIDAC-----MKIGE 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF +V NA++ +Y + G ++ A + F + +KD VSW+TM+ +G +GL D+AL L
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS----TSLI 136
+M + +KP + I ++ + ++ G + ++++ +PL T +I
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYR-----IPLEVDHVTCMI 481
Query: 137 DMYVKCKNLAYARSVFDGFS-----GASIVSWTTMIAG 169
DM+ + +LA A+ + +S ++ SW T++
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 274/533 (51%), Gaps = 36/533 (6%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHV 101
+ + +++ D+ SW ++R ++ E +D+ DM + + PS A+ S++
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 102 FAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
++ ++ GK +H ++N CG V + T L+ +Y + + A+ FD + + V
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCG--CVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTV 171
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
SW +++ GY+ + L+E R+F K+ + + + I S K+ A L A
Sbjct: 172 SWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACS---LFSAMP 228
Query: 222 LRNGITISVV-----------LATAFIDM---------------YGKCGDFRSARYVFDS 255
L++ + +++ LA + D Y K GD +SA +F
Sbjct: 229 LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRL 288
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCAKAGSLE 313
+ KD ++ AMI+ Y Q + +F QM + I+P+EIT+ S++ ++ G+
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
G W+ SYI + GIK D L TSL+D+Y K GD +++F+ +D + ++ MI GC
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
+ G A LF M + + PN +TF G L A SHSGL+QEG + F+ M D L P
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSA 467
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
+HYG MVD+L RAG L+EA +LI MPM+PN V G+LL A LH NV+ GE A +
Sbjct: 468 DHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVK 527
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVH 546
LE+ GY ++ IY++ +W D +R ++++ + K G S +E GS H
Sbjct: 528 LETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE--GSYH 578
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG V+V ++ +Y +G +E A++ FD + +K+ VSW++++ Y +G LDEA
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA-- 189
Query: 79 LLRDMRVARVKPSE--IAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS-- 134
RV P + ++ II +A+ D +G A + S +PL +
Sbjct: 190 ----RRVFDKIPEKDAVSWNLIISSYAKKGD--MGNACSLF---------SAMPLKSPAS 234
Query: 135 ---LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI-------------------- 171
LI YV C+ + AR+ FD + VSW TMI+GY
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 172 ---------HTNN--LNEGIRLFVKM--RREGVIPNEITILSLVKECGTVEALEFGKLLH 218
+T N + ++LF +M R + P+EIT+ S+V + FG +
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
++ +GI I +L+T+ ID+Y K GDF A +F ++ KD + SAMI
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
E +F M + I PN +T LL + +G ++ G + + ++ +V
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMV 474
Query: 339 DMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
DM + G ++ Y L + + N + G +L G
Sbjct: 475 DMLGRAGRLEEAYELIKSMP----MQPNAGVWGALLLASG 510
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 289/527 (54%), Gaps = 9/527 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVG-SLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
++G D V N+++ +Y ++G + R++FD KDA+SW++M+ Y +AL
Sbjct: 89 KSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKAL 148
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
++ +M + +E + S + +EL +++LG+ HG V+ + + +S++L
Sbjct: 149 EVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF--EWNHFISSTLAY 206
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEI 196
+Y + AR VFD ++ WT +++ + + E + LF M R +G++P+
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T +++ CG + L+ GK +H + NGI +VV+ ++ +DMYGKCG R AR VF+ +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGK 316
K+ + SA++ Y Q ++ +IF +M + + ++L CA ++ +GK
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGK 382
Query: 317 WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLG 376
IH ++G + ++++L+D+Y K G ID+ R+++ + R+++ WN M+S A G
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
GE A+ F +M +G+ P+ I+FI L AC H+G++ EG+ F M +G+ P EHY
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNV-KLGEWAAGQFLSLE 495
CM+DLL RAGL +EA+ L+ R + + G LL C + + ++ E A + + LE
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562
Query: 496 SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVN 542
VL+SN+Y A + GD +IR+ M G++K G S I+ +
Sbjct: 563 PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 139/332 (41%), Gaps = 50/332 (15%)
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
+ E I + I SLL C K S G H+++ K G++ D + S
Sbjct: 42 LTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNS 101
Query: 337 LVDMYAKCGD-IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
L+ +Y K G + T R+F +D + W M+SG + ALE+FVEM + G+
Sbjct: 102 LLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA 161
Query: 396 NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL-------------------------- 429
N+ T A+KACS G ++ G R FH +V G
Sbjct: 162 NEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 430 -----VPKVEHYGCMVDLLSRAGLLDEAQKLIIDM----PMRPNNVVLGSLLAACKLHKN 480
P V + ++ S+ L +EA L M + P+ G++L AC +
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 481 VKLGEWAAGQFLSLESHKCGYNVLM-SNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
+K G+ G+ + ++ G NV++ S++ K G V + R+ G+SK+ VS
Sbjct: 281 LKQGKEIHGKLI---TNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWS 335
Query: 540 EVNGSVHEFIMGDREHPETRRIYEIVAEMREK 571
+ G G ++ E + EI EM EK
Sbjct: 336 ALLG-------GYCQNGEHEKAIEIFREMEEK 360
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 236/446 (52%), Gaps = 41/446 (9%)
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
+ V L TS+I+ Y+ K+L AR FD IV W TMI+GYI N+ E LF +
Sbjct: 56 EKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQ 115
Query: 186 MRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
M R+ ++ + VL + Y GD
Sbjct: 116 M----------------------------------PCRDVMSWNTVL-----EGYANIGD 136
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLV 304
+ VFD + +++ + +I YAQ + EV F +M D G + PN+ TM +L
Sbjct: 137 MEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 305 LCAKAGSLEMGKWIHSYIDKQGI-KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL 363
CAK G+ + GKW+H Y + G K D +K +L+DMY KCG I+ +F RD++
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
WN MI+G A G G AL LF EM+ G+ P+ +TF+G L AC H GL+++G F+ M
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKL 483
DF ++P++EH GC+VDLLSRAG L +A + I MP++ + V+ +LL A K++K V +
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 484 GEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG 543
GE A + + LE V++SNIY ++ D + ++ AMRD G KE GVS IE +
Sbjct: 377 GEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDD 436
Query: 544 SVHEFIMGDREHPETRRIYEIVAEMR 569
+ +F +HP T + I+ E++
Sbjct: 437 GLVKFYSSGEKHPRTEELQRILRELK 462
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 25/390 (6%)
Query: 39 VGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMI-- 96
+G + A ++F +MV+K+ V W++MI Y LL++ DL+ R + P ++
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGY----LLNK--DLVSARRYFDLSPERDIVLWN 94
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
++I + E+ ++ ++L M R+ V ++++ Y ++ VFD
Sbjct: 95 TMISGYIEMGNMLEARSLFDQ-MPCRD-----VMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG-VIPNEITILSLVKECGTVEALEFGK 215
++ SW +I GY ++E + F +M EG V+PN+ T+ ++ C + A +FGK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 216 LLHAFTLRNGIT-ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+H + G + V + A IDMYGKCG A VF I+ +DL+ + MI+ A
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKL 333
E ++F +M + GI P+++T V +L C G +E G + +S I + +
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEH 328
Query: 334 KTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVMISGCAMLGD---GEAALELFVEME 389
+VD+ ++ G + D ++W ++ + GE ALE +++E
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLE 388
Query: 390 AQGVIPNDITFIGALKACSHSGLLQEGKRL 419
+ N F+ +G + RL
Sbjct: 389 PR----NPANFVMLSNIYGDAGRFDDAARL 414
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 2/192 (1%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RDV N ++ Y +G +E ++FD M +++ SW+ +I+ Y +NG + E L + M
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 84 -RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
V P++ M ++ A+L GK +H Y + V + +LIDMY KC
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY-GETLGYNKVDVNVKNALIDMYGKC 237
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
+ A VF G ++SW TMI G + E + LF +M+ G+ P+++T + ++
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 203 KECGTVEALEFG 214
C + +E G
Sbjct: 298 CACKHMGLVEDG 309
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 257/506 (50%), Gaps = 47/506 (9%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G+L++A +LFD++ D + ++R ++ ++ + L +M V P ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
++L G A HG V+R+ V +LI + C +L A +FD + A
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYV--KNALILFHANCGDLGIASELFDDSAKAH 177
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
V+W++M +GY ++E +RLF +M + + + I +K
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLK---------------- 221
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
C + SAR +FD KD++ +AMIS Y E
Sbjct: 222 -----------------------CKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 280 VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK-----QGIKRDTKLK 334
IF +M D G P+ +T++SLL CA G LE GK +H YI + I T +
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+L+DMYAKCG ID +F DRD+ WN +I G A L E ++E+F EM+ V
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVW 377
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
PN++TFIG + ACSHSG + EG++ F M + + P ++HYGCMVD+L RAG L+EA
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 455 LIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENK 514
+ M + PN +V +LL ACK++ NV+LG++A + LS+ + G VL+SNIYA+ +
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 515 WGDVSDIRRAMRDAGISKEPGVSSIE 540
W V +R+ D + K GVS IE
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 49/367 (13%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF + +V NA+I+ + G L A +LFD V+WS+M Y + G +DEA+ L
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+M + + V + +I
Sbjct: 201 FDEM-----------------PYKDQVAWNV------------------------MITGC 219
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+KCK + AR +FD F+ +V+W MI+GY++ E + +F +MR G P+ +TIL
Sbjct: 220 LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL 279
Query: 200 SLVKECGTVEALEFGKLLHAFTLR-----NGITISVVLATAFIDMYGKCGDFRSARYVFD 254
SL+ C + LE GK LH + L + I + + A IDMY KCG A VF
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
++++DL + +I A + + ++F +M + PNE+T + +++ C+ +G ++
Sbjct: 340 GVKDRDLSTWNTLIVGLALHHAEGSI-EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 315 GKWIHSYI-DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGC 372
G+ S + D I+ + K +VDM + G ++ + + + + ++W ++ C
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGAC 458
Query: 373 AMLGDGE 379
+ G+ E
Sbjct: 459 KIYGNVE 465
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 44/337 (13%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
++D N +I + ++ AR+LFD+ +KD V+W+ MI Y G EAL + ++
Sbjct: 206 YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQS---GVPLSTSLIDMY 139
MR A P + ++S++ A L DL+ GK LH Y++ + S G P+ +LIDMY
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC ++ A VF G + +W T+I G + ++ I +F +M+R V PNE+T +
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVG-LALHHAEGSIEMFEEMQRLKVWPNEVTFI 384
Query: 200 SLVKECGTVEALEFGKLLHAFTLRN--GITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++ C ++ G+ + +R+ I ++ +DM G+ G A +S++
Sbjct: 385 GVILACSHSGRVDEGRKYFSL-MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
I PN I +LL C G++E+GK+
Sbjct: 444 ----------------------------------IEPNAIVWRTLLGACKIYGNVELGKY 469
Query: 318 IHSYIDKQGIKRDTKLKTSLV-DMYAKCGDIDTTYRL 353
+ + +++D L+ ++YA G D ++
Sbjct: 470 ANEKL--LSMRKDESGDYVLLSNIYASTGQWDGVQKV 504
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 17/290 (5%)
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGI--TISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
L + C + L K +HA + NG+ +SVV + G + A +FD I
Sbjct: 18 LWQNCKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPK 74
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
D+ IC+ ++ AQ+ ++ ++ +M G+ P+ T +L C+K G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + + G + +K +L+ +A CGD+ LF + + W+ M SG A G
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ A+ LF EM + + ++ G LK C + + LF + V +
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLK-CKE---MDSARELFDRFTEK-----DVVTWNA 245
Query: 439 MVDLLSRAGLLDEAQ---KLIIDMPMRPNNVVLGSLLAACKLHKNVKLGE 485
M+ G EA K + D P+ V + SLL+AC + +++ G+
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 233/467 (49%), Gaps = 34/467 (7%)
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
+++ YVK L AR VFD +VSW TM+ GY NL+E + + + RR G+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
NE + L+ C L+ + H L G +VVL+ + ID Y KCG SA+
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 253 FDSIENKDLMICSAMISAYAQTNCID-------------------------------EVF 281
FD + KD+ I + +IS YA+ ++
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
D+F +M G++P + T S L A SL GK IH Y+ + ++ + + +SL+DMY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 342 AKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITF 400
+K G ++ + R+F D+ D + WN MIS A G G AL + +M V PN T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
+ L ACSHSGL++EG R F M G+VP EHY C++DLL RAG E + I +MP
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 461 MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSD 520
P+ + ++L C++H N +LG+ AA + + L+ +L+S+IYA KW V
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 521 IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRR--IYEIV 565
+R M+ ++KE VS IE+ V F + D H R+ IY I+
Sbjct: 537 LRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFIL 583
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 191/409 (46%), Gaps = 39/409 (9%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R+++ N ++ Y + G L AR +FD M ++D VSW+TM+ Y ++G L EAL ++
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
R + +K +E + ++ + L+L + HG V+ S V LS S+ID Y KC
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFL--SNVVLSCSIIDAYAKCG 228
Query: 144 NLAYARSVFDGFSGASI-------------------------------VSWTTMIAGYIH 172
+ A+ FD + I VSWT +IAGY+
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 173 TNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
+ N + LF KM GV P + T S + ++ +L GK +H + +R + + ++
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
++ IDMY K G ++ VF ++K D + + MISA AQ + + M
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 292 IRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
++PN T+V +L C+ +G +E G +W S + GI D + L+D+ + G
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 351 YRLFAAAT-DRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIP 395
R + D +WN ++ C + G+ G+ A + ++++ + P
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 4/241 (1%)
Query: 9 ARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYG 68
+ A+ C + +D+ + +I Y ++G +E A +LF +M +K+ VSW+ +I Y
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 69 RNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG 128
R G + ALDL R M VKP + S + A + L+ GK +HGY++R N +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNA 346
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGA-SIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
+ +S SLIDMY K +L + VF V W TMI+ ++ +R+ M
Sbjct: 347 IVIS-SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 188 REGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
+ V PN T++ ++ C +E G + + T+++GI ID+ G+ G F
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF 465
Query: 247 R 247
+
Sbjct: 466 K 466
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+ + + + +S +A + + + GIR + SLL C SL+ GKW
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 318 IHSYIDKQGIKR-DTKLKTSLVDMYAKCGD-IDT-------------------------- 349
IH ++ G KR +T L L+ MY KCG ID
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 350 ----TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
+F + +RD++ WN M+ G A G+ AL + E G+ N+ +F G L
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
AC S LQ ++ H V G + V ++D ++ G ++ A++ +M ++
Sbjct: 188 ACVKSRQLQLNRQA-HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 279/567 (49%), Gaps = 44/567 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ ++D + N I L+ A +M + + ++ + + + +L+
Sbjct: 798 KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 857
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L M V PS S++ A + G++L ++ + V + T+LID
Sbjct: 858 LYVRMLRDSVSPSSYTYSSLVK--ASSFASRFGESLQAHIWKFGFGFH--VKIQTTLIDF 913
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y + AR VFD ++WTTM++ Y +++ L +M + NE T
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEAT- 968
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN 258
+ I+ Y G+ A +F+ +
Sbjct: 969 ----------------------------------SNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
KD++ + MI Y+Q E +F +M + GI P+E+TM +++ CA G LE+GK +
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H Y + G D + ++LVDMY+KCG ++ +F +++ WN +I G A G
Sbjct: 1055 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFA 1114
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ AL++F +ME + V PN +TF+ AC+H+GL+ EG+R++ M+ D+ +V VEHYG
Sbjct: 1115 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 1174
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
MV L S+AGL+ EA +LI +M PN V+ G+LL C++HKN+ + E A + + LE
Sbjct: 1175 MVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMN 1234
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKE-PGVSSIEVNGSVHEFIMGDREHPE 557
GY L+ ++YA +N+W DV++IR MR+ GI K PG SSI ++ H F D+ H
Sbjct: 1235 SGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSA 1294
Query: 558 TRRIYEIVAEMREKLDNVGYTPDISAV 584
+ + ++ E+ +++ GY + V
Sbjct: 1295 SDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ +NGF DV++ +A++ MY + GSLE A +F + K+ W+++I +G E
Sbjct: 1057 YTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 1116
Query: 76 ALDLLRDMRVARVKPSEIAMISIIH--VFAELVD 107
AL + M + VKP+ + +S+ A LVD
Sbjct: 1117 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 1150
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 292/562 (51%), Gaps = 70/562 (12%)
Query: 33 IMMYGEVGSLEF--ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKP 90
IM+ G V S A +LFD M ++ VS++T+I+ Y +N EA++L R+MR +
Sbjct: 112 IMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML 171
Query: 91 SEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARS 150
+E+ + ++I + L + + L ++ + G+ V +ST+L+ MY C L AR
Sbjct: 172 NEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGR--VFVSTNLLHMYCLCLCLKDARK 229
Query: 151 VFD---------------GFSGA----------------SIVSWTTMIAGYIHTNNLNEG 179
+FD G+S A IVSW TMI G + N L+E
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 180 IRLFVKMRREGVIPNEITILSLV----KECGTVEALEF----------------GKLLHA 219
+ + +M R G+ P+E+ ++ L+ + G+ + L+ ++H
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 220 FTLRNGITIS-----------VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
+ + N I ++ + A I + K G AR VFD +KD+ +AMI
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 269 SAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGI 327
S YAQ+ +F +M + ++P+ ITMVS+ + GSLE GK H Y++ I
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTI 469
Query: 328 KRDTKLKTSLVDMYAKCGDIDTTYRLFAAA---TDRDILMWNVMISGCAMLGDGEAALEL 384
+ L +++DMYAKCG I+T +F + I WN +I G A G + AL+L
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
+ ++++ + PN ITF+G L AC H+GL++ GK F M D G+ P ++HYGCMVDLL
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 445 RAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
+AG L+EA+++I MP++ + ++ G LL+A + H NV++ E AA + +++ G V+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVM 649
Query: 505 MSNIYAAENKWGDVSDIRRAMR 526
+SN+YA +W DV+ +R MR
Sbjct: 650 LSNVYADAGRWEDVALVREEMR 671
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 177/395 (44%), Gaps = 43/395 (10%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R++ N ++ Y + G +E A +LFD++ +KD VSW TMI R LDEAL +M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM-RNRNCG----------------- 125
+KPSE+ M+ ++ A V G LHG ++ R +C
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 126 -----------QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTN 174
+ + +LI +VK + AR VFD I SW MI+GY +
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 175 NLNEGIRLFVKM-RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
+ + LF +M V P+ IT++S+ ++ +LE GK H + + I + L
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEV-------FDIFVQ 286
A IDMY KCG +A +F +N I S+ IS + C D++
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKN----ISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGK-WIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
+ I+PN IT V +L C AG +E+GK + S GI+ D K +VD+ K G
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAG 592
Query: 346 DIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGE 379
++ + D+++W +++S G+ E
Sbjct: 593 RLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 222/527 (42%), Gaps = 136/527 (25%)
Query: 91 SEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARS 150
+E A++S + A D+ G+ +H V+++ S + S+++MY KC+ LA A S
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGL--DSNGYICNSVLNMYAKCRLLADAES 97
Query: 151 VF---------------DGFSGA----------------SIVSWTTMIAGYIHTNNLNEG 179
VF DG+ + S VS+TT+I GY N +E
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDM 239
+ LF +MR G++ NE+T+ +++ C + + ++L + ++ + V ++T + M
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 240 YGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND---------- 289
Y C + AR +FD + ++L+ + M++ Y++ I++ ++F Q+ +
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 290 ---------------------CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
CG++P+E+ MV LL A++ G +H I K+G
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLFAAAT------------------------------ 358
L+ +++ YA DI + F A+
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 359 -DRDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEG 416
D+DI WN MISG A + AL LF EM + V P+ IT + A S G L+EG
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 417 KRLFHKMVHDFGLVPKVEHY-GCMVDLLSRAGLLDEA----------------------- 452
KR + +F +P ++ ++D+ ++ G ++ A
Sbjct: 458 KRAHDYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 453 -------QKLIID-------MPMRPNNVVLGSLLAACKLHKNVKLGE 485
KL +D +P++PN++ +L+AC V+LG+
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGK 562
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Query: 14 ARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
AR + +D+F NA+I Y + S + A LF +M+
Sbjct: 390 AREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISS------------------ 431
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
++VKP I M+S+ + L L+ GK H Y+ N + L+
Sbjct: 432 ------------SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTA 477
Query: 134 SLIDMYVKCKNLAYARSVF---DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
++IDMY KC ++ A ++F S ++I W +I G + + L+ ++
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 191 VIPNEITILSLVKECGTVEALEFGKL-LHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+ PN IT + ++ C +E GK + +GI + +D+ GK G A
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEA 597
Query: 250 RYVFDSIENK-DLMICSAMISA 270
+ + + K D+MI ++SA
Sbjct: 598 KEMIKKMPVKADVMIWGMLLSA 619
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 275/569 (48%), Gaps = 43/569 (7%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
C +G D + ++ Y L+ A+ + + + W+ +I +Y RN E+
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQES 168
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV-MRNRNCGQSGVPLSTSL 135
+ + + M ++ E S+I A L+D G+ +HG + + + C + + +L
Sbjct: 169 VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN---LYVCNAL 225
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I MY + + AR +FD S VSW +I Y L E +L +M GV +
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 196 IT-----------------------------------ILSLVKECGTVEALEFGKLLHAF 220
+T +++ +K C + AL++GK+ H
Sbjct: 286 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 345
Query: 221 TLRNGITISVV--LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+R+ + + + I MY +C D R A VF +E L +++IS +A +
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI-DKQGIKRDTKLKTSL 337
E + +M G PN IT+ S+L L A+ G+L+ GK H YI +Q K L SL
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
VDMYAK G+I R+F + RD + + +I G LG GE AL F +M+ G+ P+
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
+T + L ACSHS L++EG LF KM H FG+ ++EHY CMVDL RAG LD+A+ +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 458 DMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ-FLSLESHKCGYNVLMSNIYAAENKWG 516
+P P++ + +LL AC +H N +GEWAA + L + G+ +L++++YA W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 517 DVSDIRRAMRDAGISKEPGVSSIEVNGSV 545
+ ++ + D G+ K + +E + +
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 188/491 (38%), Gaps = 91/491 (18%)
Query: 91 SEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP----LSTSLIDMYVKCKNLA 146
S +++S F E V G+ LH + C SG+ L L+ Y L
Sbjct: 85 SSASLLSTCVGFNEFVP---GQQLHAH------CISSGLEFDSVLVPKLVTFYSAFNLLD 135
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
A+++ + + W +I YI E + ++ +M +G+ +E T S++K C
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
+ +G+++H + ++ + A I MY + G AR +FD + +D + +A
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 267 MISAYAQTNCIDEVFDIF-----------------------------------VQMNDCG 291
+I+ Y + E F + V M +C
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDT-KLKTSLVDMYAKCGDIDT 349
+R + M++ L C+ G+L+ GK H + + D ++ SL+ MY++C D+
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+ +F + WN +ISG A E L EM G PN IT L +
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR------- 462
G LQ GK ++ + + +VD+ +++G + A+++ M R
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 463 ---------------------------PNNVVLGSLLAACKLHKNVKLGEW-------AA 488
P++V + ++L+AC V+ G W
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 489 GQFLSLESHKC 499
G L LE + C
Sbjct: 556 GIRLRLEHYSC 566
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 115/292 (39%), Gaps = 40/292 (13%)
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILS---LVKECGTVEALEFGKLLHAFTLRNGIT 227
I L E R F +R + +E + S L+ C G+ LHA + +G+
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSG-SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM 287
VL + Y A+ + ++ E + + +I +Y + E ++ +M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
GIR +E T S++ CA G+ +H I+ + + + +L+ MY + G +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 348 DTTYRLFAAATDRDILMWNVMIS-----------------------------------GC 372
D RLF ++RD + WN +I+ GC
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
G+ AL V M V + I LKACSH G L+ GK +FH +V
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK-VFHCLV 346
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 275/569 (48%), Gaps = 43/569 (7%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
C +G D + ++ Y L+ A+ + + + W+ +I +Y RN E+
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQES 168
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV-MRNRNCGQSGVPLSTSL 135
+ + + M ++ E S+I A L+D G+ +HG + + + C + + +L
Sbjct: 169 VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN---LYVCNAL 225
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
I MY + + AR +FD S VSW +I Y L E +L +M GV +
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 196 IT-----------------------------------ILSLVKECGTVEALEFGKLLHAF 220
+T +++ +K C + AL++GK+ H
Sbjct: 286 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 345
Query: 221 TLRNGITISVV--LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+R+ + + + I MY +C D R A VF +E L +++IS +A +
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI-DKQGIKRDTKLKTSL 337
E + +M G PN IT+ S+L L A+ G+L+ GK H YI +Q K L SL
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
VDMYAK G+I R+F + RD + + +I G LG GE AL F +M+ G+ P+
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
+T + L ACSHS L++EG LF KM H FG+ ++EHY CMVDL RAG LD+A+ +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 458 DMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ-FLSLESHKCGYNVLMSNIYAAENKWG 516
+P P++ + +LL AC +H N +GEWAA + L + G+ +L++++YA W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 517 DVSDIRRAMRDAGISKEPGVSSIEVNGSV 545
+ ++ + D G+ K + +E + +
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 188/491 (38%), Gaps = 91/491 (18%)
Query: 91 SEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP----LSTSLIDMYVKCKNLA 146
S +++S F E V G+ LH + C SG+ L L+ Y L
Sbjct: 85 SSASLLSTCVGFNEFVP---GQQLHAH------CISSGLEFDSVLVPKLVTFYSAFNLLD 135
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
A+++ + + W +I YI E + ++ +M +G+ +E T S++K C
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
+ +G+++H + ++ + A I MY + G AR +FD + +D + +A
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 267 MISAYAQTNCIDEVFDIF-----------------------------------VQMNDCG 291
+I+ Y + E F + V M +C
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ-GIKRDT-KLKTSLVDMYAKCGDIDT 349
+R + M++ L C+ G+L+ GK H + + D ++ SL+ MY++C D+
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+ +F + WN +ISG A E L EM G PN IT L +
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR------- 462
G LQ GK ++ + + +VD+ +++G + A+++ M R
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 463 ---------------------------PNNVVLGSLLAACKLHKNVKLGEW-------AA 488
P++V + ++L+AC V+ G W
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 489 GQFLSLESHKC 499
G L LE + C
Sbjct: 556 GIRLRLEHYSC 566
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 115/292 (39%), Gaps = 40/292 (13%)
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILS---LVKECGTVEALEFGKLLHAFTLRNGIT 227
I L E R F +R + +E + S L+ C G+ LHA + +G+
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSG-SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM 287
VL + Y A+ + ++ E + + +I +Y + E ++ +M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
GIR +E T S++ CA G+ +H I+ + + + +L+ MY + G +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 348 DTTYRLFAAATDRDILMWNVMIS-----------------------------------GC 372
D RLF ++RD + WN +I+ GC
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
G+ AL V M V + I LKACSH G L+ GK +FH +V
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK-VFHCLV 346
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 297/560 (53%), Gaps = 9/560 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G+ +V+V ++++ MY + +E A + F ++ + ++VSW+ +I + + + A
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 79 LLRDMRV-ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLI 136
LL M + A V ++ + + + L K +H V++ G Q + + ++I
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK---LGLQHEITICNAMI 245
Query: 137 DMYVKCKNLAYARSVFDGFSGAS-IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
Y C +++ A+ VFDG G+ ++SW +MIAG+ LF++M+R V +
Sbjct: 246 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 305
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGK--CGDFRSARYVF 253
T L+ C E FGK LH ++ G+ A I MY + G A +F
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+S+++KDL+ +++I+ +AQ ++ F + I+ ++ +LL C+ +L+
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGC 372
+G+ IH+ K G + + +SL+ MY+KCG I++ + F + + + WN MI G
Sbjct: 426 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
A G G+ +L+LF +M Q V + +TF L ACSH+GL+QEG L + M + + P+
Sbjct: 486 AQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPR 545
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFL 492
+EHY VDLL RAGL+++A++LI MP+ P+ +VL + L C+ +++ A L
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
Query: 493 SLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGD 552
+E V +S++Y+ KW + + +++ M++ G+ K PG S IE+ V F D
Sbjct: 606 EIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 665
Query: 553 REHPETRRIYEIVAEMREKL 572
R +P + IY ++ ++ +++
Sbjct: 666 RSNPLCQDIYMMIKDLTQEM 685
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 237/491 (48%), Gaps = 20/491 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D++V N I+ Y + G L +A LFD+M +D+VSW+TMI Y G L++A L M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+ + ++ A + LG+ +HG V++ + V + +SL+DMY KC+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--ECNVYVGSSLVDMYAKCER 151
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE----ITILS 200
+ A F S + VSW +IAG++ ++ L M + + + +L+
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI-ENK 259
L+ + L K +HA L+ G+ + + A I Y CG A+ VFD + +K
Sbjct: 212 LLDDPMFCNLL---KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
DL+ ++MI+ +++ + F++F+QM + + T LL C+ GK +H
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAK--CGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
+ K+G+++ T +L+ MY + G ++ LF + +D++ WN +I+G A G
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E A++ F + + + +D F L++CS LQ G+++ H + G V
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVIS 447
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
++ + S+ G+++ A+K + + + V +++ H LG+ + L L S
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH---GLGQVS----LDLFSQ 500
Query: 498 KCGYNVLMSNI 508
C NV + ++
Sbjct: 501 MCNQNVKLDHV 511
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 13/321 (4%)
Query: 115 HGYVMRNRNCGQ-SGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT 173
H Y ++ CG S + +S ++D Y+K L YA +FD VSW TMI+GY
Sbjct: 23 HCYAIK---CGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
L + LF M+R G + + L+K +V+ + G+ +H ++ G +V +
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN-DCGI 292
++ +DMY KC A F I + + +A+I+ + Q I F + M +
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 293 RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
+ T LL L + K +H+ + K G++ + + +++ YA CG + R
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 353 LF-AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSG 411
+F +D++ WN MI+G + E+A ELF++M+ V + T+ G L ACS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--- 316
Query: 412 LLQEGKRLFHKMVHDFGLVPK 432
E ++F K +H G+V K
Sbjct: 317 --GEEHQIFGKSLH--GMVIK 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 122/282 (43%), Gaps = 3/282 (1%)
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTN 275
L H + ++ G + ++ +D Y K G A +FD + +D + + MIS Y
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
+++ + +F M G + + LL A ++G+ +H + K G + + + +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 336 SLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
SLVDMYAKC ++ + F ++ + + WN +I+G + D + A L ME + +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 396 NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL 455
D L + + H V GL ++ M+ + G + +A+++
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 456 IIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
+ + + S++A H +L E A F+ ++ H
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQRH 299
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 267/505 (52%), Gaps = 35/505 (6%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G+ +V + +I+ +YG+ + AR++FD++V+ VSW+ ++R Y G DEA+ +
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMF 251
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M V+P + S++ + + L++GK +H ++ + V STS+ DMYV
Sbjct: 252 FKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV--STSVFDMYV 309
Query: 141 KCKNLAYARSVFD-----------------GFSGAS--------------IVSWTTMIAG 169
KC L AR VFD SG + IVSW M+ G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 170 YIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS 229
Y+H + +E + MR+E + +T++ ++ C + ++ GK H F R+G +
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSI-ENKDLMICSAMISAYAQTNCIDEVFDIFVQMN 288
V++A A +DMYGKCG +SA F + E +D + +A+++ A+ ++ F M
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ 489
Query: 289 DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID 348
+P++ T+ +LL CA +L +GK IH ++ + G K D ++ ++VDMY+KC D
Sbjct: 490 -VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 349 TTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS 408
+F A RD+++WN +I GC G + ELF+ +E +GV P+ +TF+G L+AC
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACI 608
Query: 409 HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVL 468
G ++ G + F M + + P+VEHY CM++L + G L + ++ ++ MP P +L
Sbjct: 609 REGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQML 668
Query: 469 GSLLAACKLHKNVKLGEWAAGQFLS 493
+ AC+ ++ KLG WAA + ++
Sbjct: 669 TRINDACQRYRWSKLGAWAAKRLMN 693
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 237/483 (49%), Gaps = 39/483 (8%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
+F+ N I YG+ G ++ AR+LF++M ++D SW+ +I +NG+ DE + R M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG-VPLSTSLIDMYVKCKN 144
V+ +E + ++ ++DL+L + LH V++ G SG V L TS++D+Y KC+
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKY---GYSGNVDLETSIVDVYGKCRV 212
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
++ AR VFD S VSW ++ Y+ +E + +F KM V P T+ S++
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C ALE GK++HA ++ + V++T+ DMY KC SAR VFD +KDL
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGI-------------------------------R 293
++ +S YA + E ++F M + I
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+ +T+V +L +C+ ++MGK H +I + G + + +L+DMY KCG + +
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 354 FAAATD-RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
F ++ RD + WN +++G A +G E AL F M+ + P+ T L C++
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPA 511
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLL 472
L GK + ++ D G V G MVD+ S+ D A ++ + R + ++ S++
Sbjct: 512 LNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSII 569
Query: 473 AAC 475
C
Sbjct: 570 RGC 572
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 170/338 (50%), Gaps = 5/338 (1%)
Query: 10 RTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGR 69
R AR + +D+ + + Y G AR+LFD M +++ VSW+ M+ Y
Sbjct: 313 RLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVH 372
Query: 70 NGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV 129
DEALD L MR + ++ I++V + + D+++GK HG++ R+ + V
Sbjct: 373 AHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY--DTNV 430
Query: 130 PLSTSLIDMYVKCKNLAYARSVFDGFSG-ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
++ +L+DMY KC L A F S VSW ++ G + + F M+
Sbjct: 431 IVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV 490
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
E P++ T+ +L+ C + AL GK +H F +R+G I VV+ A +DMY KC F
Sbjct: 491 EAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDY 549
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
A VF +DL++ +++I + EVF++F+ + + G++P+ +T + +L C +
Sbjct: 550 AIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIR 609
Query: 309 AGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
G +E+G ++ S K I + ++++Y K G
Sbjct: 610 EGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 253/467 (54%), Gaps = 40/467 (8%)
Query: 109 KLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIA 168
K GK +H +++ Q + +S L+ +++KC L+YAR VFD ++ ++ MI+
Sbjct: 51 KAGKKIHADIIKT--GFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 169 GYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGT-----VEALEFGKLLHAFTLR 223
GY+ + E + L +M G + T+ ++K + + +L+HA ++
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID---EV 280
+ + VL TA +D Y K G SAR VF+++++++++ C++MIS Y ++ E+
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 281 F-----------------------------DIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
F D+++ M G PN T S++ C+ S
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
E+G+ +H+ I K G+ K+ +SL+DMYAKCG I+ R+F ++++ W MI G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
G+ E ALELF M+ + PN +TF+GAL ACSHSGL+ +G +F M D+ + P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
K+EHY C+VDL+ RAG L++A + MP RP++ + +LL++C LH NV+L AA +
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 492 LSLESHK-CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
L + K G + +SN+YA+ +KW +VS IR M+ ISK G S
Sbjct: 469 FKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 202/416 (48%), Gaps = 57/416 (13%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF D+ + +++++ + G L +ARQ+FD++ +++ MI Y ++GL+ E L
Sbjct: 62 KTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLL 121
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAE-----LVDLKLGKALHGYVMRNRNCG-QSGVPLS 132
L++ M + K + ++ ++ L + +H +++ C + L
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK---CDVELDDVLI 178
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHT------------------- 173
T+L+D YVK L AR+VF+ ++V T+MI+GY++
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 174 --NNLNEG-----------IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAF 220
N + EG + +++ M+R G PN T S++ C + + E G+ +HA
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 221 TLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEV 280
+++G+ + + ++ +DMY KCG AR VFD ++ K++ ++MI Y + +E
Sbjct: 299 IMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEA 358
Query: 281 FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL--- 337
++F +M + I PN +T + L C+ +G ++ G I + ++RD +K +
Sbjct: 359 LELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF-----ESMQRDYSMKPKMEHY 413
Query: 338 ---VDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLGDGE----AALELF 385
VD+ + GD++ + A +R D +W ++S C + G+ E AA ELF
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 8 SARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNY 67
S + AR E +V C ++I Y G +E A ++F+ KD V ++ M+ +
Sbjct: 188 SGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGF 247
Query: 68 GRNG-LLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ 126
R+G ++D+ M+ A P+ S+I + L ++G+ +H +M++
Sbjct: 248 SRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS--GVY 305
Query: 127 SGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
+ + + +SL+DMY KC + AR VFD ++ SWT+MI GY N E + LF +M
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Query: 187 RREGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
+ + PN +T L + C ++ G ++ + + + +D+ G+ GD
Sbjct: 366 KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGD 425
Query: 246 FRSA-RYVFDSIENKDLMICSAMISA 270
A + E D I +A++S+
Sbjct: 426 LNKAFEFARAMPERPDSDIWAALLSS 451
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 232/422 (54%), Gaps = 17/422 (4%)
Query: 130 PLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF------ 183
PLS L C L+YA S+ S+ + T+I+ + +N + F
Sbjct: 43 PLSKLLHLSSTVC--LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQI 100
Query: 184 VKMRREGVIPNEITILSLVKECG-TVEALEFGKLLHAFTLR--NGITISVVLATAFIDMY 240
+ R V PNE T SL K G + G+ LHA L+ + + A + Y
Sbjct: 101 LSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY 160
Query: 241 GKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID---EVFDIFVQMNDCGIRPNEI 297
CG R AR +F+ I DL + +++AYA + ID EV +F++M +RPNE+
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNEL 217
Query: 298 TMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAA 357
++V+L+ CA G G W H Y+ K + + + TSL+D+Y+KCG + ++F
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM 277
Query: 358 TDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGK 417
+ RD+ +N MI G A+ G G+ +EL+ + +QG++P+ TF+ + ACSHSGL+ EG
Sbjct: 278 SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGL 337
Query: 418 RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKL 477
++F+ M +G+ PKVEHYGC+VDLL R+G L+EA++ I MP++PN + S L + +
Sbjct: 338 QIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
Query: 478 HKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
H + + GE A L LE G VL+SNIYA N+W DV R M+D ++K PG+S
Sbjct: 398 HGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Query: 538 SI 539
++
Sbjct: 458 TL 459
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 163/367 (44%), Gaps = 18/367 (4%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMI------RNYGRNGLLDEALDLLRDMRVARVKPSEIAM 95
L +A + ++ + ++T+I N + L D + R V+P+E
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 96 ISIIHVFAELVDLKL---GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVF 152
S+ A D + G+ALH +V++ + +L+ Y C L ARS+F
Sbjct: 116 PSLFK--ASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 153 DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALE 212
+ + +W T++A Y ++ ++ + + R V PNE+++++L+K C +
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV 233
Query: 213 FGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYA 272
G H + L+N +T++ + T+ ID+Y KCG AR VFD + +D+ +AMI A
Sbjct: 234 RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA 293
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK-QGIKRDT 331
E +++ + G+ P+ T V + C+ +G ++ G I + + GI+
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGD---GEAALE--LF 385
+ LVD+ + G ++ + +W + GD GE AL+ L
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Query: 386 VEMEAQG 392
+E E G
Sbjct: 414 LEFENSG 420
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D FV A++ Y G L AR LF+++ + D +W+T++ Y + +D ++L
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
+V+P+E++++++I A L + G H YV++N V TSLID+Y KC
Sbjct: 209 RMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV--GTSLIDLYSKCGC 266
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
L++AR VFD S + + MI G EGI L+ + +G++P+ T + +
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
Query: 205 CGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
C ++ G ++ ++ GI V +D+ G+ G A
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 246/495 (49%), Gaps = 40/495 (8%)
Query: 112 KALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYI 171
K LH + +R +GV + L+ + NL YAR +FD + + +I Y
Sbjct: 5 KQLHAHCLR------TGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
+ +E I L+ + +G+ P+ T + + + +LLH+ R+G
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAY-------------------- 271
T I Y K G AR VFD + +D+ + +AMI+ Y
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 272 -----------AQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+Q E +F+ M D ++PN IT+VS+L CA G LE+G+ +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDG 378
Y + G + + + ++MY+KCG ID RLF R++ WN MI A G
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ AL LF +M +G P+ +TF+G L AC H G++ +G+ LF M + PK+EHYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
M+DLL R G L EA LI MPM+P+ VV G+LL AC H NV++ E A+ LE
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSS-IEVNGSVHEFIMGDREHPE 557
G V+MSNIYAA KW V +R+ M+ ++K G S +EV VH+F + D+ HP
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 558 TRRIYEIVAEMREKL 572
+ IY+++ E+ ++
Sbjct: 479 SYEIYQVLEEIFRRM 493
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 168/376 (44%), Gaps = 33/376 (8%)
Query: 39 VGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISI 98
+ +L +AR+LFD + ++ +I+ Y + E++ L + ++PS I
Sbjct: 29 IPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 88
Query: 99 IHVFAELVDLKLGKALHGYVMRN-----------------------------RNCGQSGV 129
A + + LH R+ + V
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 130 PLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
P+ ++I Y + ++ A +FD ++ SWTT+I+G+ N +E +++F+ M ++
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 190 -GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
V PN IT++S++ C + LE G+ L + NG ++ + A I+MY KCG
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 249 ARYVFDSIEN-KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
A+ +F+ + N ++L ++MI + A DE +F QM G +P+ +T V LL+ C
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 308 KAGSLEMGKWIHSYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMW 365
G + G+ + +++ I + ++D+ + G + Y L + D ++W
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 366 NVMISGCAMLGDGEAA 381
++ C+ G+ E A
Sbjct: 389 GTLLGACSFHGNVEIA 404
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 41/288 (14%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
+GF D F C +I Y ++G+L AR++FD+M +D W+ MI Y R G + A++L
Sbjct: 111 SGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMEL 170
Query: 80 LRDM--------------------------------RVARVKPSEIAMISIIHVFAELVD 107
M + VKP+ I ++S++ A L +
Sbjct: 171 FDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGE 230
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA-SIVSWTTM 166
L++G+ L GY N + + + I+MY KC + A+ +F+ ++ SW +M
Sbjct: 231 LEIGRRLEGYA--RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC---GTVEALEFGKLLHAFTLR 223
I +E + LF +M REG P+ +T + L+ C G V ++ +L +
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMV--VKGQELFKSMEEV 346
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMISA 270
+ I+ + ID+ G+ G + A + ++ K D ++ ++ A
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD-KDAVSWSTMIRNYGRNGLLDEAL 77
ENGF +++VCNA I MY + G ++ A++LF+++ + ++ SW++MI + +G DEAL
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEAL 302
Query: 78 DLLRDMRVARVKPSEIAMISII 99
L M KP + + ++
Sbjct: 303 TLFAQMLREGEKPDAVTFVGLL 324
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 255/495 (51%), Gaps = 14/495 (2%)
Query: 48 LFDKMVDKDAVSWSTMIRNYGRNGLLDEALD-LLRDMRVARVKPSEIAMISIIHVFAELV 106
+F+++ W+ +I+ Y L E + L+R MR +P E ++ V +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 107 DLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTT 165
+++G ++HG V+R G V + TS +D Y KCK+L AR VF + VSWT
Sbjct: 125 QVRVGSSVHGLVLR---IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
++ Y+ + L E +F M + + LVK V A KL R+
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNA---KKLFDEMPKRD- 237
Query: 226 ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFV 285
++ T+ ID Y K GD SAR +F+ D+ SA+I YAQ +E F +F
Sbjct: 238 ----IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK-LKTSLVDMYAKC 344
+M ++P+E MV L+ C++ G E+ + + SY+ ++ K + + +L+DM AKC
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKC 353
Query: 345 GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
G +D +LF RD++ + M+ G A+ G G A+ LF +M +G++P+++ F L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
K C S L++EG R F M + ++ +HY C+V+LLSR G L EA +LI MP +
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 465 NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRA 524
GSLL C LH N ++ E A LE G VL+SNIYAA ++W DV+ +R
Sbjct: 474 ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDK 533
Query: 525 MRDAGISKEPGVSSI 539
M + GI+K G S I
Sbjct: 534 MNENGITKICGRSWI 548
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 180/378 (47%), Gaps = 18/378 (4%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF +DV V + + YG+ L AR++F +M +++AVSW+ ++ Y ++G L+EA +
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
D+ R S A++ + +LV+ K K R+ + TS+ID Y
Sbjct: 200 -DLMPERNLGSWNALVDGLVKSGDLVNAK--KLFDEMPKRD-------IISYTSMIDGYA 249
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K ++ AR +F+ G + +W+ +I GY NE ++F +M + V P+E ++
Sbjct: 250 KGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 201 LVKECGTVEALEFGKLLHAFT-LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
L+ C + E + + ++ R S + A IDM KCG A +F+ + +
Sbjct: 310 LMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWI 318
DL+ +M+ A C E +F +M D GI P+E+ +L +C ++ +E G ++
Sbjct: 370 DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYF 429
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD 377
K I + +V++ ++ G + Y L + + W ++ GC++ G+
Sbjct: 430 ELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
Query: 378 GE----AALELFVEMEAQ 391
E A LF E+E Q
Sbjct: 490 TEIAEVVARHLF-ELEPQ 506
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 241/427 (56%), Gaps = 6/427 (1%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
K+LA+AR++ S ++ +W + GY +++ E I ++ +M+R G+ PN++T L+
Sbjct: 61 KDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLL 120
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
K C + L G+ + L++G V + I +YG C AR VFD + ++++
Sbjct: 121 KACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVV 180
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+++++A + ++ VF+ F +M P+E TMV LL C G+L +GK +HS +
Sbjct: 181 SWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQV 238
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
+ ++ + +L T+LVDMYAK G ++ +F D+++ W+ MI G A G E AL
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 383 ELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
+LF +M + V PN +TF+G L ACSH+GL+ +G + FH+M + P + HYG MVD
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 442 LLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK---LGEWAAGQFLSLESHK 498
+L RAG L+EA I MP P+ VV +LL+AC +H + +GE + + LE +
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
G V+++N +A W + +++RR M++ + K G S +E+ GS H F G E
Sbjct: 419 SGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEY 478
Query: 559 RRIYEIV 565
IYE++
Sbjct: 479 VSIYELL 485
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 172/359 (47%), Gaps = 13/359 (3%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHV 101
L FAR L D +W+ + R Y + E++ + +M+ +KP+++ ++
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 102 FAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV 161
A + L G+ + V+++ V + +LI +Y CK + AR VFD + ++V
Sbjct: 123 CASFLGLTAGRQIQVEVLKHGF--DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVV 180
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
SW +++ + LN F +M + P+E T++ L+ CG L GKL+H+
Sbjct: 181 SWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQV 238
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVF 281
+ + ++ L TA +DMY K G AR VF+ + +K++ SAMI AQ +E
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 282 DIFVQ-MNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSLVD 339
+F + M + +RPN +T + +L C+ G ++ G K+ H IK ++VD
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 340 MYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCAMLGD------GEAALELFVEMEAQ 391
+ + G ++ Y + D ++W ++S C++ D GE + +E+E +
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPK 417
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 12/236 (5%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++GF DV+V N +I +YG AR++FD+M +++ VSW++++ NG L+ +
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR---NCGQSGVPLSTSL 135
+M R P E M+ ++ +L LGK +H VM NC L T+L
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNC-----RLGTAL 253
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI-PN 194
+DMY K L YAR VF+ ++ +W+ MI G E ++LF KM +E + PN
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 195 EITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+T L ++ C ++ G K H + I ++ A +D+ G+ G A
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA 369
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 299/627 (47%), Gaps = 81/627 (12%)
Query: 32 IIMMYGEVGSLEFARQLFDKM---VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARV 88
+I +Y +G L AR +F+ + + D W+++++ +GL + AL+L R MR +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 89 KPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMYVKCKNLAY 147
+ I+ L L +A H V++ G + + + L+ +Y K +
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQ---IGLKENLHVVNELLTLYPKAGRMGD 211
Query: 148 ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT---ILSLVKE 204
A ++F + +SW MI G+ + +++F M+RE P+E+T +LS +
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 205 CGT--------------------------------VEALEFGKLLHAFTLRNGITISVVL 232
CG +EAL + +H + ++ G +
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS 331
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND--- 289
A I +YGK G + A ++F I NK + +++I+++ +DE +F ++ +
Sbjct: 332 RNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNH 391
Query: 290 -CGIRPNEITMVS-----------------------------------LLVLCAKAGSLE 313
C ++ N +T S +L +CA+ +L
Sbjct: 392 VCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALN 451
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
+G+ IH ++ + + + ++ +LV+MYAKCG + +F A D+D++ WN +I G
Sbjct: 452 LGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYG 511
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
M G E AL +F M + G P+ I + L ACSH+GL+++G+ +F+ M FGL P+
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
EHY C+VDLL R G L EA +++ +MPM P VLG+LL +C++HKNV + E A Q
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDR 553
LE + G +L+SNIY+A +W + +++R + + K G S IEV ++F G
Sbjct: 632 LEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSI 691
Query: 554 EHPETRRIYEIVAEMREKLDNVGYTPD 580
E IY ++ ++ + G T D
Sbjct: 692 VQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 170/398 (42%), Gaps = 73/398 (18%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G ++ V N ++ +Y + G + A LF +M ++ +SW+ MI+ + + + A+ +
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 81 RDMRVARVKPSEIAMISIIH-----------------------------------VFAEL 105
M+ KP E+ S++ V AEL
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL 307
Query: 106 VDLKLGKALHGYVMRN-----------------------------RNCGQSGVPLSTSLI 136
L + + +HGYV++ R G+ SLI
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLI 367
Query: 137 DMYVKCKNLAYARSVFDGFS--------GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
+V L A S+F A++V+WT++I G ++ + F +M+
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
V+ N +TI ++ C + AL G+ +H +R ++ ++++ A ++MY KCG
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
VF++I +KDL+ +++I Y ++ +F +M G P+ I +V++L C+
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSH 547
Query: 309 AGSLEMGKWIHSYIDKQ-GIKRDTKLKTSLVDMYAKCG 345
AG +E G+ I + K+ G++ + +VD+ + G
Sbjct: 548 AGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 152/373 (40%), Gaps = 47/373 (12%)
Query: 97 SIIHVFAELVDLKLG----KALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVF 152
S+ H F L+ L L + +H V+ + +SG L+ +LI +Y + L AR+VF
Sbjct: 54 SLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSG-SLAANLISVYARLGLLLDARNVF 112
Query: 153 DGFSG---ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
+ S + + W +++ + + L+ MR+ G+ + + +++ C +
Sbjct: 113 ETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLG 172
Query: 210 ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
+ H ++ G+ ++ + + +Y K G A +F + ++ M + MI
Sbjct: 173 RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIK 232
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL-------------------------- 303
++Q + IF M +P+E+T S+L
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 304 ---------VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+CA+ +L + + +H Y+ K G + + +L+ +Y K G + LF
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ----GVIPNDITFIGALKACSHS 410
++ I WN +I+ G + AL LF E+E V N +T+ +K C+
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 411 GLLQEGKRLFHKM 423
G + F +M
Sbjct: 413 GRGDDSLEYFRQM 425
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 327 IKRDTKLKTSLVDMYAKCG---DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
I R L +L+ +YA+ G D + + D+ +WN ++ G E ALE
Sbjct: 85 IFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALE 144
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
L+ M +G+ + L+AC + G R FH V GL + ++ L
Sbjct: 145 LYRGMRQRGLTGDGYILPLILRACRYLGRFGLC-RAFHTQVIQIGLKENLHVVNELLTLY 203
Query: 444 SRAGLLDEAQKLIIDMPMRPN---NVVLGSLLAACKLHKNVKLGEW 486
+AG + +A L ++MP+R NV++ VK+ EW
Sbjct: 204 PKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 238/456 (52%), Gaps = 35/456 (7%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
++ YA S W +I G+ ++ N + I ++++M R G++P+ +T L+K
Sbjct: 57 DVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMK 116
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYG---------------------- 241
+ + G LH +++G+ + + I MYG
Sbjct: 117 SSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVT 176
Query: 242 ---------KCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
K GD SAR VFD + +D++ S+MI Y + ++ +IF QM G
Sbjct: 177 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 236
Query: 293 -RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
+ NE+TMVS++ CA G+L GK +H YI + L+TSL+DMYAKCG I +
Sbjct: 237 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 352 RLF--AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+F A+ + D LMWN +I G A G +L+LF +M + P++ITF+ L ACSH
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
GL++E F K + + G PK EHY CMVD+LSRAGL+ +A I +MP++P +LG
Sbjct: 357 GGLVKEAWHFF-KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
+LL C H N++L E + + L+ H G V ++N+YA ++ +R AM G
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
+ K G S ++++G+ H FI D+ H + +IY ++
Sbjct: 476 VKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 181/399 (45%), Gaps = 40/399 (10%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G +++A + K+ D W+ +IR + + ++++ + M + P + ++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 100 HVFAELVDLKLGKALHGYVMRN-----------------------------RNCGQSGVP 130
+ L + KLG +LH V+++ +
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
S++D Y K ++ AR VFD S +V+W++MI GY+ N+ + +F +M R G
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 191 VI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
NE+T++S++ C + AL GK +H + L + ++V+L T+ IDMY KCG A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 250 RYVF--DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
VF S++ D ++ +A+I A I E +F +M + I P+EIT + LL C+
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI-LMWN 366
G ++ + + G + ++ +VD+ ++ G + + + + M
Sbjct: 356 HGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 367 VMISGCAMLGDGEAALEL---FVEMEAQGVIPNDITFIG 402
+++GC G+ E A + +E++ ND ++G
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPH----NDGRYVG 450
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 121/258 (46%), Gaps = 43/258 (16%)
Query: 1 MLSHTFISARTRGARFCC---ENGFHRDVFVCNAIIMMYG-------------------- 37
M S + +S R G C ++G D+F+CN +I MYG
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 38 -----------EVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD-MRV 85
+ G + AR +FD+M ++D V+WS+MI Y + G ++AL++ MR+
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
K +E+ M+S+I A L L GK +H Y++ V L TSLIDMY KC ++
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHL--PLTVILQTSLIDMYAKCGSI 292
Query: 146 AYARSVF--DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
A SVF + W +I G + E ++LF KMR + P+EIT L L+
Sbjct: 293 GDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
Query: 204 EC---GTV-EALEFGKLL 217
C G V EA F K L
Sbjct: 353 ACSHGGLVKEAWHFFKSL 370
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 238/463 (51%), Gaps = 43/463 (9%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGY-----IHTNNLNEGIRLFVKMRREGVIPNEITI 198
NL+YAR +FD FS + + ++ Y +H ++ RL V R PN
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVN--RSVPRPNHFIY 129
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC-GDFRSARYVFDSIE 257
++K + + L+H ++G + VV+ TA + Y AR +FD +
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQM------------------------------ 287
++++ +AM+S YA++ I +F M
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 288 --NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
N+ IRPNE+T+V +L CA+ G+L++ K IH++ ++ + D + SLVD+Y KCG
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM---EAQGVIPNDITFIG 402
+++ +F A+ + + WN MI+ A+ G E A+ +F EM + P+ ITFIG
Sbjct: 310 NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 403 ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L AC+H GL+ +G+ F M + FG+ P++EHYGC++DLL RAG DEA +++ M M+
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 463 PNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIR 522
+ + GSLL ACK+H ++ L E A ++L + GY +M+N+Y W + R
Sbjct: 430 ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRAR 489
Query: 523 RAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
+ ++ K PG S IE++ VH+F D+ HPET IY I+
Sbjct: 490 KMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 129 VPLSTSLIDMYVKC-KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLN---------- 177
V + T+L+ Y ++ AR +FD S ++VSWT M++GY + +++
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 178 ---------------------EGIRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGK 215
E + LF +M E I PNE+T++ ++ C L+ K
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTN 275
+HAF R ++ V ++ + +D+YGKCG+ A VF K L ++MI+ +A
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 276 CIDE---VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGK-WIHSYIDKQGIKRDT 331
+E VF+ +++N I+P+ IT + LL C G + G+ + ++ GI+
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRI 400
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNVMISGCAMLG 376
+ L+D+ + G D + + + D +W +++ C + G
Sbjct: 401 EHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 159/354 (44%), Gaps = 46/354 (12%)
Query: 19 ENGFHRDVFVCNAIIMMYGE-VGSLEFARQLFDKMVDKDAVSWSTMIRNYGR-------- 69
++GFH V V A++ Y V + ARQLFD+M +++ VSW+ M+ Y R
Sbjct: 154 KSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAV 213
Query: 70 -----------------------NGLLDEALDLLRDM-RVARVKPSEIAMISIIHVFAEL 105
NGL EA+ L R M ++P+E+ ++ ++ A+
Sbjct: 214 ALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT 273
Query: 106 VDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTT 165
L+L K +H + R R+ S V +S SL+D+Y KC NL A SVF S S+ +W +
Sbjct: 274 GTLQLAKGIHAFAYR-RDLS-SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 166 MIAGYIHTNNLNEGIRLFVKMRR---EGVIPNEITILSLVKECGTVEALEFGK-LLHAFT 221
MI + E I +F +M + + P+ IT + L+ C + G+ T
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-DLMICSAMISAYAQTNCIDEV 280
R GI + ID+ G+ G F A V +++ K D I ++++A +D +
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLD-L 450
Query: 281 FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
++ V+ N + PN V+++ EMG W + ++ IK K
Sbjct: 451 AEVAVK-NLVALNPNNGGYVAMMANLYG----EMGNWEEARRARKMIKHQNAYK 499
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 233/433 (53%), Gaps = 10/433 (2%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF---VKMRREGVIPNEITIL 199
K+ YA S+FD + + TMI ++ + G+R F VK E + P+ +T
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFH 120
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIEN 258
L+ C GK +H + ++NG+ +S + T + +Y + AR VFD I
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ 180
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
D++ +++ Y + E ++F +M G+ P+E ++ + L CA+ G+L GKWI
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 319 HSYIDKQG-IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
H ++ K+ I+ D + T+LVDMYAKCG I+T +F T R++ W +I G A G
Sbjct: 241 HEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGY 300
Query: 378 GEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
+ A+ +E + G+ P+ + +G L AC+H G L+EG+ + M + + PK EHY
Sbjct: 301 AKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
C+VDL+ RAG LD+A LI MPM+P V G+LL C+ HKNV+LGE A L LE
Sbjct: 361 SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
Query: 497 HKCGYN----VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGD 552
V +SNIY + + + S +R + G+ K PG S +EV+G+V +F+ GD
Sbjct: 421 GNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGD 480
Query: 553 REHPETRRIYEIV 565
HP +I+ ++
Sbjct: 481 VSHPNLLQIHTVI 493
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 185/393 (47%), Gaps = 25/393 (6%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSL----EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+G HR+ + + ++ + + +L +A +FD + ++ + TMIR R+
Sbjct: 37 HGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHL 96
Query: 76 ALD---LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
L L+ + PS + +I + +GK +H +V++N GV LS
Sbjct: 97 GLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN------GVFLS 150
Query: 133 -----TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
T ++ +YV+ K L AR VFD +V W ++ GY+ +EG+ +F +M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDF 246
+G+ P+E ++ + + C V AL GK +H F + I V + TA +DMY KCG
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN-DCGIRPNEITMVSLLVL 305
+A VF + +++ +A+I YA + ++ + GI+P+ + ++ +L
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 306 CAKAGSLEMGKWIHSYID-KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL- 363
CA G LE G+ + ++ + I + + +VD+ + G +D L + +
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 364 MWNVMISGCAMLGD---GEAALELFVEMEAQGV 393
+W +++GC + GE A++ +++E V
Sbjct: 391 VWGALLNGCRTHKNVELGELAVKNLLDLEKGNV 423
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/644 (26%), Positives = 316/644 (49%), Gaps = 82/644 (12%)
Query: 8 SARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDK-MVDKDAVSWSTMIRN 66
S R AR + R+V+ NA+I Y + +++ AR+LF+ ++D ++++T++
Sbjct: 36 SGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSG 95
Query: 67 YGR-NGLLDEALDLLRDMRVAR---VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR 122
+ + +G EA+++ +M + + + +++ + A+L ++ G+ LHG +++
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKT- 154
Query: 123 NCGQSGVPLS-TSLIDMYVKCKNLAYARSVFDG----FSGA------------------- 158
G G + +SLI MY KC ++F+G F +
Sbjct: 155 --GNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKA 212
Query: 159 -----------SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGT 207
+SW T+IAGY E +++ V M G+ +E + +++ +
Sbjct: 213 LSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSS 272
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR-------------------- 247
+++L+ GK +HA L+NG + +++ +D+Y KCG+ +
Sbjct: 273 LKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSM 332
Query: 248 -----------SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI---FVQMNDCGIR 293
A+ +FDS+ K+L++ +AM Y D V ++ F+ N+
Sbjct: 333 IVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA-NETNT- 390
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
P+ + MVS+L C+ +E GK IH + + GI D KL T+ VDMY+KCG+++ R+
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 354 FAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
F ++ +RD +M+N MI+GCA G + + F +M G P++ITF+ L AC H GL+
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI--IDMPMRPNNVVLGSL 471
EG++ F M+ + + P+ HY CM+DL +A LD+A +L+ ID + + V+LG+
Sbjct: 511 LEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGID-QVEKDAVILGAF 569
Query: 472 LAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGIS 531
L AC +KN +L + + L +E + ++N YA+ +W ++ IR MR +
Sbjct: 570 LNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629
Query: 532 KEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNV 575
G S ++ H F D H ET IY ++ + + L +
Sbjct: 630 IFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEI 673
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 211/495 (42%), Gaps = 118/495 (23%)
Query: 57 AVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHG 116
AVS + ++ Y ++GLL EA + VF E+++
Sbjct: 23 AVSSNQLVNLYSKSGLLREARN----------------------VFDEMLE--------- 51
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNN 175
RN V ++I YVK N+ AR +F+ + ++++ T+++G+ T+
Sbjct: 52 ---RN-------VYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDG 101
Query: 176 L-NEGIRLFVKMRR---EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
+E I +F +M R + + ++ T+ ++VK + + +G+ LH ++ G +
Sbjct: 102 CESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKF 161
Query: 232 LATAFIDMYGKCGDFRSARYVFDS--IENKDLMICSAMISAYAQTNCIDEVFDIF----- 284
++ I MY KCG F+ +F+ +E D + +AMI+AY + ID+ +F
Sbjct: 162 AVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE 221
Query: 285 ---------------------------VQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
V M + G++ +E + ++L + + SL++GK
Sbjct: 222 LNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDID----------------------------- 348
+H+ + K G + + + +VD+Y KCG++
Sbjct: 282 VHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGK 341
Query: 349 --TTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL---FVEMEAQGVIPNDITFIGA 403
RLF + +++++++W M G L ++ LEL F+ E P+ + +
Sbjct: 342 MVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN--TPDSLVMVSV 399
Query: 404 LKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRP 463
L ACS ++ GK + H G++ + VD+ S+ G ++ A++ I D
Sbjct: 400 LGACSLQAYMEPGKEI-HGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER-IFDSSFER 457
Query: 464 NNVVLGSLLAACKLH 478
+ V+ +++A C H
Sbjct: 458 DTVMYNAMIAGCAHH 472
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 73/317 (23%)
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
++ L+ G L H ++++G T++ V + +++Y K G R AR VFD + +++ +A+
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 268 ISAYAQTNCIDEVFDIFVQMNDC------------------------------------- 290
I+AY + N + E ++F + ++C
Sbjct: 61 IAAYVKFNNVKEARELF-ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKD 119
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG----- 345
I ++ T+ +++ L AK ++ G+ +H + K G +SL+ MY+KCG
Sbjct: 120 DIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEV 179
Query: 346 ----------------------------DIDTTYRLFAAATD-RDILMWNVMISGCAMLG 376
DID +F + D + WN +I+G A G
Sbjct: 180 CNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG 239
Query: 377 DGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
E AL++ V ME G+ ++ +F L S L+ GK + +++ + K
Sbjct: 240 YEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 437 GCMVDLLSRAGLLDEAQ 453
G +VD+ + G + A+
Sbjct: 300 G-IVDVYCKCGNMKYAE 315
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 272/534 (50%), Gaps = 20/534 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ + G +D F + + + + V + +A +F+ + + + ++TMIR Y + +
Sbjct: 50 YMVKTGLDKDDFAVSKL-LAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPER 108
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG----VPL 131
A + +R + + I+ + + + + +G+ LHG +R SG L
Sbjct: 109 AFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALR------SGFMVFTDL 162
Query: 132 STSLIDMYVKCKNLAYARSVFDGF-SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
+LI Y C ++ AR VFD V+++T++ GY+ + + LF MR+
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V+ N T+LS + + L + H ++ G+ + + L TA I MYGK G SAR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+FD KD++ + MI YA+T ++E + QM ++PN T V LL CA +
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
+ +G+ + ++++ I D L T+LVDMYAK G ++ +F D+D+ W MIS
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 371 GCAMLGDGEAALELFVEMEAQG--VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
G G A+ LF +ME + V PN+ITF+ L ACSH GL+ EG R F +MV +
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYS 462
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA 488
PKVEHYGC+VDLL RAG L+EA +LI ++P+ ++ +LLAAC+++ N LGE
Sbjct: 463 FTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVM 522
Query: 489 GQFLSL-ESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
+ + E+H +L A N + + R KE G S+IE+
Sbjct: 523 MRLAEMGETHPADAILLAGTHAVAGNPEKSLDNELNKGR-----KEAGYSAIEI 571
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 231/433 (53%), Gaps = 10/433 (2%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF---VKMRREGVIPNEITIL 199
K+ YA S+FD + + TMI ++ + G+R F VK E + P+ +T
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFH 120
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIEN 258
L+ C GK +H + ++NG+ +S + T + +Y + AR VFD I
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ 180
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWI 318
D++ +++ Y + E ++F +M GI P+E ++ + L CA+ G+L GKWI
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 319 HSYIDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGD 377
H ++ K+ I+ D + T+LVDMYAKCG I+T +F T R++ W +I G A G
Sbjct: 241 HEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGY 300
Query: 378 GEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY 436
+ A +E + G+ P+ + +G L AC+H G L+EG+ + M +G+ PK EHY
Sbjct: 301 AKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY 360
Query: 437 GCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLES 496
C+VDL+ RAG LD+A LI MPM+P V G+LL C+ HKNV+LGE A L LE
Sbjct: 361 SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEK 420
Query: 497 HKCGYN----VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGD 552
V +SNIY + + + +R + GI K PG S +EV+G V +F+ GD
Sbjct: 421 GNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGD 480
Query: 553 REHPETRRIYEIV 565
HP +I+ ++
Sbjct: 481 VSHPNLLQIHTLI 493
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 189/399 (47%), Gaps = 37/399 (9%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSL----EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+G HR+ + + ++ + + +L +A +FD + ++ + TMIR R+
Sbjct: 37 HGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHL 96
Query: 76 ALD---LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
L L+ + PS + +I + +GK +H +V++N GV LS
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN------GVFLS 150
Query: 133 -----TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
T ++ +YV+ K L AR VFD +V W ++ GY+ +EG+ +F +M
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDF 246
G+ P+E ++ + + C V AL GK +H F + I V + TA +DMY KCG
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 247 RSARYVFDSIENKDLMICSAMISAYA-------QTNCIDEVFDIFVQMNDCGIRPNEITM 299
+A VF+ + +++ +A+I YA T C+D ++ D GI+P+ + +
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR-----IERED-GIKPDSVVL 324
Query: 300 VSLLVLCAKAGSLEMGKWIHSYID-KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
+ +L CA G LE G+ + ++ + GI + + +VD+ + G +D L
Sbjct: 325 LGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMP 384
Query: 359 DRDIL-MWNVMISGCAMLGD---GEAALELFVEMEAQGV 393
+ + +W +++GC + GE A++ +++E V
Sbjct: 385 MKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNV 423
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 265/528 (50%), Gaps = 13/528 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F ++ RD + + Y L AR+LFD ++ W+++IR Y +
Sbjct: 30 FVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTT 89
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVM-----RNRNCGQSGVP 130
L L + + +P + F+E D K + +HG + ++ CG
Sbjct: 90 VLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG----- 144
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
++++ Y K + A +F + W MI GY ++GI LF M+ G
Sbjct: 145 --SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
PN T+++L L +HAF L+ + + A ++MY +C SA
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VF+SI DL+ CS++I+ Y++ E +F ++ G +P+ + + +L CA+
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS 370
GK +HSY+ + G++ D K+ ++L+DMY+KCG + LFA +++I+ +N +I
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
G + G A E F E+ G+IP++ITF L C HSGLL +G+ +F +M +FG+
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQ 490
P+ EHY MV L+ AG L+EA + ++ + ++ +LG+LL+ C++H+N L E A
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 491 F-LSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
+ E + Y V++SN+YA +W +V +R + ++ K PG+S
Sbjct: 503 IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 13/270 (4%)
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
LH+F ++ + AT Y D SAR +FD + + + +++I AYA+ +
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
V +F Q+ RP+ T L +++ + + IH G+ D ++
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSA 146
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
+V Y+K G I +LF + D D+ +WNVMI G G + + LF M+ +G PN
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 397 DITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY---GC-MVDLLSRAGLLDEA 452
T + SGL+ L VH F L ++ + GC +V++ SR + A
Sbjct: 207 CYTMVALT-----SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 453 QKLIIDMPMRPNNVVLGSLLAA---CKLHK 479
+ + P+ V SL+ C HK
Sbjct: 262 CS-VFNSISEPDLVACSSLITGYSRCGNHK 290
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 277/558 (49%), Gaps = 45/558 (8%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ GF DVF A++ MY +V + A ++ D+M ++ S + + NG +A
Sbjct: 59 KTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFR 118
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ D ARV S + +++ V D++ G LH M++ + V + TSL+ M
Sbjct: 119 MFGD---ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGF--EMEVYVGTSLVSM 173
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEIT 197
Y +C A +F+ S+V++ I+G + +N +F MR+ PN++T
Sbjct: 174 YSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVT 233
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
++ + C ++ L++G+ LH ++ ++ TA IDMY KC ++SA VF ++
Sbjct: 234 FVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELK 293
Query: 258 N------------------------------------KDLMICSAMISAYAQTNCIDEVF 281
+ D +++IS ++Q + E F
Sbjct: 294 DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
F +M + P+ + SLL C+ +L+ GK IH ++ K +RD + TSL+DMY
Sbjct: 354 KFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMY 413
Query: 342 AKCGDIDTTYRLFA--AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
KCG R+F +D + WNVMISG G+ E+A+E+F + + V P+ T
Sbjct: 414 MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLAT 473
Query: 400 FIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
F L ACSH G +++G ++F M ++G P EH GCM+DLL R+G L EA++ +ID
Sbjct: 474 FTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE-VIDQ 532
Query: 460 PMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVS 519
P++ V SLL +C+ H + LGE AA + LE V++S+IYAA +W DV
Sbjct: 533 MSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVE 592
Query: 520 DIRRAMRDAGISKEPGVS 537
IR+ + + K PG+S
Sbjct: 593 SIRQVIDQKQLVKLPGLS 610
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 5/233 (2%)
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
PN+ T L+K C + + G++LHA ++ G + V ATA + MY K A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
D + + + +A +S + + F +F G N +T+ S+L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
E G +H K G + + + TSLV MY++CG+ R+F + ++ +N ISG
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 373 AMLGDGEAALELFVEMEA-QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
G +F M PND+TF+ A+ AC+ LQ G++L H +V
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL-HGLV 257
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 269/549 (48%), Gaps = 38/549 (6%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DV + N+++ MY + G L A F +++ + SW+T+I Y + GL+DEA+ L M
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 85 VARV------------KPSEIAMISIIHV---------FAELVDLK---------LGKAL 114
V K S A+ ++ + FA LK +GK L
Sbjct: 201 QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 115 HGYVMRNRNCGQSGVPLSTS-LIDMYVKCKNLAYARSVFDGFS---GASIVSWTTMIAGY 170
H V+++ G P + S LIDMY C +L YA VF +S+ W +M++G+
Sbjct: 261 HCCVVKS---GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
+ + L +++ + + + T+ +K C L G +H+ + +G +
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
++ + +D++ G+ + A +F + NKD++ S +I ++ F +F ++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
G+ ++ + ++L +C+ SL GK IH K+G + + T+LVDMY KCG+ID
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
LF +RD++ W +I G G E A F +M G+ PN +TF+G L AC HS
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
GLL+E + M ++GL P +EHY C+VDLL +AGL EA +LI MP+ P+ + S
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 471 LLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
LL AC HKN L A + L +SN YA W +S +R A + G
Sbjct: 618 LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG- 676
Query: 531 SKEPGVSSI 539
+KE G+S I
Sbjct: 677 AKESGMSWI 685
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 217/478 (45%), Gaps = 37/478 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G ++VF+ N +I MY + L A ++FD+M +++ V+W+TM+ Y +G ++A++
Sbjct: 33 KQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIE 92
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELV-DLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
L R M + + + M S + LV D++LG ++ + + G V L S++D
Sbjct: 93 LYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD--VVLMNSVVD 150
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF-------------- 183
MYVK L A S F S SW T+I+GY ++E + LF
Sbjct: 151 MYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCL 210
Query: 184 ----------------VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGIT 227
V+M+REG++ + + +K C L GK LH +++G+
Sbjct: 211 ISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE 270
Query: 228 ISVVLATAFIDMYGKCGDFRSARYVFDSIE---NKDLMICSAMISAYAQTNCIDEVFDIF 284
S +A IDMY CG A VF + N + + ++M+S + + +
Sbjct: 271 SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL 330
Query: 285 VQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC 344
+Q+ + + T+ L +C +L +G +HS + G + D + + LVD++A
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 345 GDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
G+I ++LF ++DI+ ++ +I GC G A LF E+ G+ + L
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
K CS L GK++ H + G + +VD+ + G +D L M R
Sbjct: 451 KVCSSLASLGWGKQI-HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER 507
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 40/283 (14%)
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR---SARYVFDSIEN 258
++ CG V+A + G+ + A ++ GI+ +V +A I MY DFR A VFD +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMY---VDFRLLSDAHKVFDEMSE 68
Query: 259 KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR-PNEITMVSLLVLCAKAGSLEMGKW 317
++++ + M+S Y ++ +++ +M D NE ++L C G +++G
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDI------------------------------ 347
++ I K+ ++ D L S+VDMY K G +
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 348 -DTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
D LF +++ WN +ISG G ALE V M+ +G++ + LKA
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
CS GLL GK+L H V GL ++D+ S G L
Sbjct: 248 CSFGGLLTMGKQL-HCCVVKSGLESSPFAISALIDMYSNCGSL 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMW 365
C K + + G+ I +++ KQGI ++ + +++ MY + +++F ++R+I+ W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 366 NVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
M+SG G A+EL+ M +++ N+ + LKAC G +Q G ++ ++
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA-CK 476
+ L V +VD+ + G L EA ++ +RP++ +L++ CK
Sbjct: 135 KE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 47/84 (55%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
C + G+ + A++ MY + G ++ LFD M+++D VSW+ +I +G+NG ++E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 76 ALDLLRDMRVARVKPSEIAMISII 99
A M ++P+++ + ++
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLL 551
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 268/551 (48%), Gaps = 42/551 (7%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
++V C++++ Y ++G + AR LFD+M +++ ++W+ MI Y + G ++ L M
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 84 RV-ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
R VK + + + + V + G +HG V +R + + L SL+ MY K
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV--SRMPLEFDLFLGNSLMSMYSKL 323
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
+ A++VF VSW ++I G + ++E LF KM P +
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------PGK------- 370
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLM 262
+ + + ++ F+ + I+ KC + +F + KD +
Sbjct: 371 ------DMVSWTDMIKGFSGKGEIS--------------KCVE------LFGMMPEKDNI 404
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+AMISA+ +E F +M + PN T S+L A L G IH +
Sbjct: 405 TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
K I D ++ SLV MY KCG+ + Y++F+ ++ +I+ +N MISG + G G+ AL
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+LF +E+ G PN +TF+ L AC H G + G + F M + + P +HY CMVDL
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Query: 443 LSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN 502
L R+GLLD+A LI MP +P++ V GSLL+A K H V L E AA + + LE
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 503 VLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIY 562
V++S +Y+ K D I + I K+PG S I + G VH F+ GD I
Sbjct: 645 VVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG 704
Query: 563 EIVAEMREKLD 573
+ +R++++
Sbjct: 705 FTLKMIRKEME 715
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 161/404 (39%), Gaps = 74/404 (18%)
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
S I + + NL A ++F S SIVSW MI+ Y +++ ++F +M
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS 114
Query: 194 NEITILSLVKE--------------------------CGTVEALEF--GKLLHAFT---L 222
I +++K G V A F + L+A T
Sbjct: 115 YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKF 174
Query: 223 RNGITISVVLA--------------------------TAFIDMYGKCGDFRSARYVFDSI 256
R+ + +V+L+ ++ + Y K G AR +FD +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM 234
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMG 315
++++ +AMI Y + ++ F +F++M G ++ N T+ + C G
Sbjct: 235 TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
IH + + ++ D L SL+ MY+K G + +F ++D + WN +I+G
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQR 354
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
A ELF +M + + +++ +K S GK K V FG++P+ ++
Sbjct: 355 KQISEAYELFEKMPGKDM----VSWTDMIKGFS-------GKGEISKCVELFGMMPEKDN 403
Query: 436 --YGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNVVLGSLLAA 474
+ M+ G +EA M + PN+ S+L+A
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 242/442 (54%), Gaps = 6/442 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NG VF+ +++ MY + G + AR++FD++V++D V W MI N EAL
Sbjct: 242 KNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALG 301
Query: 79 LLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
L R M ++ P+ + + +I+ V ++ LKLGK +H +V++++N + + + LID
Sbjct: 302 LFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-VHSGLID 360
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
+Y KC ++A R VF G + +SWT +++GY ++ +R V M++EG P+ +T
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
I +++ C + A++ GK +H + L+N +V L T+ + MY KCG +FD +E
Sbjct: 421 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 480
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
+++ +AMI Y + + ++F M RP+ +TM +L +C+ +L++GK
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 540
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMIS--GCAML 375
+H +I K+ + + ++ MY KCGD+ + F A + L W +I GC L
Sbjct: 541 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 600
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
A+ F +M ++G PN TF L CS +G + E R F+ M+ + L P EH
Sbjct: 601 F--RDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 436 YGCMVDLLSRAGLLDEAQKLII 457
Y +++LL+R G ++EAQ+L +
Sbjct: 659 YSLVIELLNRCGRVEEAQRLAV 680
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 12/435 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNG--LLDEAL 77
NG + F+ ++ MY GS++ A+++FD+ + SW+ ++R +G + L
Sbjct: 140 NGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVL 199
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
+MR V + ++ ++ FA L+ G H ++N + V L TSL+D
Sbjct: 200 STFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLF--NSVFLKTSLVD 257
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM-RREGVIPNEI 196
MY KC + AR VFD IV W MIAG H E + LF M E + PN +
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITI-SVVLATAFIDMYGKCGDFRSARYVFDS 255
+ +++ G V+AL+ GK +HA L++ + + + ID+Y KCGD S R VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ ++ + +A++S YA D+ V M G RP+ +T+ ++L +CA+ +++ G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
K IH Y K + L TSL+ MY+KCG + RLF R++ W MI
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF-HKMVHDFGLVPKV- 433
D A +E+F M P+ +T L CS L+ GK L H + +F +P V
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 434 ----EHYGCMVDLLS 444
+ YG DL S
Sbjct: 558 ARIIKMYGKCGDLRS 572
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 3/296 (1%)
Query: 170 YIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS 229
+ NNL + + + + G+ N T +L++ C ++L GK +H NG+ +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI--SAYAQTNCIDEVFDIFVQM 287
L T + MY CG + A+ VFD + ++ +A++ + + +V F +M
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
+ G+ N ++ ++ A A +L G H+ K G+ LKTSLVDMY KCG +
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 348 DTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKA 406
R+F +RDI++W MI+G A AL LF M + + PN + L
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L+ GK + ++ V + + ++DL + G + +++ R
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ +N F +V + ++++MY + G E+ +LFD++ ++ +W+ MI Y N L
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP-LSTS 134
+++ R M +++ +P + M ++ V ++L LKLGK LHG++++ +P +S
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF---ESIPFVSAR 559
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
+I MY KC +L A FD + ++WT +I Y + I F +M G PN
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPN 619
Query: 195 EIT---ILSLVKECGTV-EALEFGKLL 217
T +LS+ + G V EA F L+
Sbjct: 620 TFTFTAVLSICSQAGFVDEAYRFFNLM 646
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 14/272 (5%)
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ +K+ I I +A+ N ++ I + GI N T +LL C + SL G
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
K +H +I G++ + L+T LV MY CG + ++F +T ++ WN ++ G +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 376 GDG--EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
G + L F EM GV N + K+ + + L++G + H + GL V
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSV 249
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA-GQFL 492
+VD+ + G + A++ + D + + VV G+++A +K +W A G F
Sbjct: 250 FLKTSLVDMYFKCGKVGLARR-VFDEIVERDIVVWGAMIAGLAHNKR----QWEALGLFR 304
Query: 493 SLESHKCGY--NVLMSNIYAAENKWGDVSDIR 522
++ S + Y +V+++ I GDV ++
Sbjct: 305 TMISEEKIYPNSVILTTILPV---LGDVKALK 333
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 219/425 (51%), Gaps = 14/425 (3%)
Query: 127 SGVPLSTS-----LIDMYVKCKNLAYARSVFDGFSGASIVS-------WTTMIAGYIHTN 174
S PLS L + C +LA R + + I+ W ++ YI
Sbjct: 37 SVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHE 96
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ + I++++ M R V+P+ ++ ++K + GK LH+ +R G +
Sbjct: 97 SPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCES 156
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
FI +Y K G+F +AR VFD + L +A+I +E ++FV M G+ P
Sbjct: 157 GFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP 216
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYI--DKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
++ TMVS+ C G L + +H + K K D + SL+DMY KCG +D
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 353 LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
+F R+++ W+ MI G A G+ ALE F +M GV PN ITF+G L AC H GL
Sbjct: 277 IFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGL 336
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLL 472
++EGK F M +F L P + HYGC+VDLLSR G L EA+K++ +MPM+PN +V G L+
Sbjct: 337 VEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Query: 473 AACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISK 532
C+ +V++ EW A + LE G V+++N+YA W DV +R+ M+ ++K
Sbjct: 397 GGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAK 456
Query: 533 EPGVS 537
P S
Sbjct: 457 IPAYS 461
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 16/334 (4%)
Query: 57 AVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHG 116
A W+ ++R+Y R+ +A+ + M + V P ++ +I ++ D LGK LH
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
+R G + I +Y K AR VFD + SW +I G H
Sbjct: 142 VAVRLGFVGDEFC--ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 177 NEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI--TISVVLAT 234
NE + +FV M+R G+ P++ T++S+ CG + L LH L+ +++
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+ IDMYGKCG A ++F+ + ++++ S+MI YA E + F QM + G+RP
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL------VDMYAKCGDID 348
N+IT V +L C G +E GK + +K + +L+ L VD+ ++ G +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAM-----MKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 349 TTYRLFAAATDR-DILMWNVMISGCAMLGDGEAA 381
++ + ++++W ++ GC GD E A
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 43/307 (14%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D F + I +Y + G E AR++FD+ ++ SW+ +I G +EA+++
Sbjct: 147 GFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMF 206
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
DM+ + ++P + M+S+ L DL L LH V++ + +S + + SLIDMY
Sbjct: 207 VDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYG 266
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC + A +F+ ++VSW++MI GY N E + F +MR GV PN+IT +
Sbjct: 267 KCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVG 326
Query: 201 LVKECGTVEALEFGKLLHA-----FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
++ C +E GK A F L G++ +D+ + G + A+ V +
Sbjct: 327 VLSACVHGGLVEEGKTYFAMMKSEFELEPGLS----HYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ ++PN + L+ C K G +EM
Sbjct: 383 MP----------------------------------MKPNVMVWGCLMGGCEKFGDVEMA 408
Query: 316 KWIHSYI 322
+W+ Y+
Sbjct: 409 EWVAPYM 415
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 235/430 (54%), Gaps = 12/430 (2%)
Query: 133 TSLIDMYVKCKNLAYARSVFD--GFSGASIVSWTTMIAGYIHTNN-LNEGIRLFVKMRRE 189
S+ID YVKC + AR +FD +++SW +MI+GY T++ ++ +LF M +
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+I I VK G +E + L R+ VV ID Y K G A
Sbjct: 251 DLISWNSMIDGYVKH-GRIE--DAKGLFDVMPRRD-----VVTWATMIDGYAKLGFVHHA 302
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAK 308
+ +FD + ++D++ ++M++ Y Q E +IF M + + P++ T+V +L A+
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQ 362
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
G L +H YI ++ KL +L+DMY+KCG I +F ++ I WN M
Sbjct: 363 LGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAM 422
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
I G A+ G GE+A ++ +++E + P+DITF+G L ACSHSGL++EG F M
Sbjct: 423 IGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHK 482
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA 488
+ P+++HYGCMVD+LSR+G ++ A+ LI +MP+ PN+V+ + L AC HK + GE A
Sbjct: 483 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVA 542
Query: 489 GQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEF 548
+ + VL+SN+YA+ W DV +R M++ I K PG S IE++G VHEF
Sbjct: 543 KHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Query: 549 IMGDREHPET 558
+ E T
Sbjct: 603 FVDSIEVSST 612
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 192/472 (40%), Gaps = 89/472 (18%)
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN--LA-YA 148
E ++ S IHV +HG +++ S L+T ++ + + LA +A
Sbjct: 9 ECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSN--LTTRIVLAFASSRRPYLADFA 66
Query: 149 RSVFDGFSGASI--------VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
R VF + S W +I + H + + + L M GV ++ ++
Sbjct: 67 RCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 126
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD------ 254
++K C + ++ G +H F + G+ + L I +Y KCG +R +FD
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 255 ---------------------------SIENKDLMICSAMISAYAQT-NCIDEVFDIFVQ 286
+E K+L+ ++MIS YAQT + +D +F
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
M + + I+ S++ K G +E K + + +RD +++D YAK G
Sbjct: 247 MPE----KDLISWNSMIDGYVKHGRIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGF 298
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG-VIPNDITFIGALK 405
+ LF RD++ +N M++G ALE+F +ME + ++P+D T + L
Sbjct: 299 VHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 406 ACSHSGLLQEG---------KRLF--------------------HKMVHDFGLVPK-VEH 435
A + G L + K+ + H M+ G+ K ++H
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418
Query: 436 YGCMVDLLSRAGLLDEAQKLIID---MPMRPNNVVLGSLLAACKLHKNVKLG 484
+ M+ L+ GL + A +++ + ++P+++ +L AC VK G
Sbjct: 419 WNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 144/337 (42%), Gaps = 59/337 (17%)
Query: 182 LFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG-ITISVVLATA----- 235
L K E I + I +L K V + G+L+ ++N +T +VLA A
Sbjct: 2 LVFKSTMECSISSTIHVLGSCKTSDDVNQIH-GRLIKTGIIKNSNLTTRIVLAFASSRRP 60
Query: 236 FIDMYGKC--GDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
++ + +C ++ + F +E D + +A+I +++ + + M + G+
Sbjct: 61 YLADFARCVFHEYHVCSFSFGEVE--DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVS 118
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
++ ++ +L C++ G ++ G IH ++ K G+ D L+ L+ +Y KCG + + ++
Sbjct: 119 VDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQM 178
Query: 354 FAAATDRD---------------------------------ILMWNVMISGCAMLGDG-E 379
F RD ++ WN MISG A DG +
Sbjct: 179 FDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVD 238
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK--VEHYG 437
A +LF +M + +I + G +K G +++ K LF M P+ V +
Sbjct: 239 IASKLFADMPEKDLISWNSMIDGYVK----HGRIEDAKGLFDVM-------PRRDVVTWA 287
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
M+D ++ G + A+ L MP R + V S++A
Sbjct: 288 TMIDGYAKLGFVHHAKTLFDQMPHR-DVVAYNSMMAG 323
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 239/415 (57%), Gaps = 3/415 (0%)
Query: 127 SGVPLSTSLIDMYVKCKNL-AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
S V LS+ L+ Y K +L + SVF +I SW +I + + ++ I LF++
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 186 MRREGVI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
M RE + P++ T+ +++ C + G L+H L+ G + S+ +++A + MY G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 245 DFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
AR +FD + +D ++ +AM Y Q +F +M G + + MVSLL+
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
C + G+L+ GK +H + ++ L ++ DMY KC +D + +F + RD++
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
W+ +I G + GD + +LF EM +G+ PN +TF+G L AC+H GL+ E L+ +++
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV-EKSWLYFRLM 362
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
++ +VP+++HY + D +SRAGLL+EA+K + DMP++P+ V+G++L+ CK++ NV++G
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 485 EWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
E A + + L+ K Y V ++ +Y+A ++ + +R+ M++ ISK PG SSI
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 194/437 (44%), Gaps = 42/437 (9%)
Query: 22 FHRDVFVCNAIIMMYGEVGSL-EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL- 79
+ +V + + +++ Y ++ L + +F M ++ SW+ +I + R+G +++DL
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
LR R + V+P + + I+ + + K G +H V+ + S + +S++L+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH--VLCLKLGFSSSLFVSSALVIMY 179
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
V L +AR +FD V +T M GY+ G+ +F +M G + + ++
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
SL+ CG + AL+ GK +H + +R + + L A DMY KC A VF ++ +
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ S++I Y + F +F +M GI PN +T + +L CA G +E
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
+ + I + K S+ D ++ G ++ +
Sbjct: 360 RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF-------------------------- 393
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP-KVEHYGC 438
+E V P++ L C G ++ G+R+ +++ L P K +Y
Sbjct: 394 --------LEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ---LKPRKASYYVT 442
Query: 439 MVDLLSRAGLLDEAQKL 455
+ L S AG DEA+ L
Sbjct: 443 LAGLYSAAGRFDEAESL 459
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 37/347 (10%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
C + GF +FV +A+++MY ++G L AR+LFD M +D+V ++ M Y + G
Sbjct: 159 LCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAML 218
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
L + R+M + + M+S++ +L LK GK++HG+ +R +C G+ L ++
Sbjct: 219 GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC--LGLNLGNAI 276
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
DMYVKC L YA +VF S ++SW+++I GY ++ +LF +M +EG+ PN
Sbjct: 277 TDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNA 336
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+T L ++ C G+ L + Y + + V D
Sbjct: 337 VTFLGVLSACA----------------HGGLVEKSWLYFRLMQEYNIVPELKHYASVADC 380
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ L+ E + F++ D ++P+E M ++L C G++E+G
Sbjct: 381 MSRAGLL----------------EEAEKFLE--DMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
+ + + Q R +L +Y+ G D L ++ I
Sbjct: 423 ERVAREL-IQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQI 468
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 219/414 (52%), Gaps = 3/414 (0%)
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
+ G T L E + L + G+ T L++EC + GK +HA G
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
++ L + +Y GD ++A +F S++ +DL+ +AMIS Y Q E I+
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
M I P++ T S+ C+ LE GK H+ + K+ IK + + ++LVDMY KC
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
+R+F + R+++ W +ISG G L+ F +M+ +G PN +TF+ L A
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
C+H GL+ +G F+ M D+G+ P+ +HY MVD L RAG L EA + ++ P + +
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMR 526
V GSLL AC++H NVKL E AA +FL L+ G V+ +N YA+ S +RR M
Sbjct: 380 VWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Query: 527 DAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPD 580
+AG+ K+PG S IE+ G VH F+ D H + +IY+ V EM ++ Y PD
Sbjct: 440 NAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 144/299 (48%), Gaps = 11/299 (3%)
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
L L+ +Y +L A +F ++ W MI+GY+ EG+ ++ MR+
Sbjct: 145 LKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR 204
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
++P++ T S+ + C ++ LE GK HA ++ I ++++ +A +DMY KC F
Sbjct: 205 IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGH 264
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VFD + ++++ +++IS Y + EV F +M + G RPN +T + +L C G
Sbjct: 265 RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 311 SLEMGKWIHSYIDKQ--GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD-ILMWNV 367
++ G W H Y K+ GI+ + + ++VD + G + Y + ++ +W
Sbjct: 325 LVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGS 383
Query: 368 MISGCAMLGDG---EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
++ C + G+ E A F+E++ N + F +C GL + ++ KM
Sbjct: 384 LLGACRIHGNVKLLELAATKFLELDPTNG-GNYVVFANGYASC---GLREAASKVRRKM 438
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 120/231 (51%), Gaps = 5/231 (2%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF + ++ ++++Y G L+ A LF + +D + W+ MI Y + GL E L +
Sbjct: 138 GFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
DMR R+ P + S+ + L L+ GK H +++ C +S + + ++L+DMY
Sbjct: 198 YDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR--CIKSNIIVDSALVDMYF 255
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC + + VFD S ++++WT++I+GY + ++E ++ F KM+ EG PN +T L
Sbjct: 256 KCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLV 315
Query: 201 LVKECGTVEALEFGKLLHAFTLRN--GITISVVLATAFIDMYGKCGDFRSA 249
++ C ++ G H ++++ GI A +D G+ G + A
Sbjct: 316 VLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 265/519 (51%), Gaps = 39/519 (7%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF D+ + N+++ +Y + + A +F +M + + VSW+ MI +G+ D++++ L
Sbjct: 279 GFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFL 338
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
MR + +P+E+ IS++ C +SG
Sbjct: 339 TRMRDSGFQPNEVTCISVLGA----------------------CFRSG------------ 364
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
++ R +F S+ +W M++GY + + E I F +M+ + + P++ T+
Sbjct: 365 ---DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK- 259
++ C + LE GK +H +R I+ + + + I +Y +C + +FD N+
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR-PNEITMVSLLVLCAKAGSLEMGKWI 318
D+ ++MIS + + +F +M+ + PNE + ++L C++ SL G+
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 319 HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDG 378
H + K G D+ ++T+L DMY KCG+ID+ + F A ++ ++WN MI G G G
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ A+ L+ +M + G P+ ITF+ L ACSHSGL++ G + M G+ P+++HY C
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
+VD L RAG L++A+KL P + ++V+ LL++C++H +V L A + + L+
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
VL+SN Y++ +W D + ++ M + K PG S
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 212/466 (45%), Gaps = 51/466 (10%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSL-EFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
+ G +++FV NA++ MY + G + ++ ++F+ + + VS++ +I R + EA+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFA---------ELVDLKLGKALHGYVMRNRNCGQSG 128
+ R M V+ + + +I+ + A E+ +LGK +H +R G
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD-- 283
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
+ L+ SL+++Y K K++ A +F ++VSW MI G+ ++ + +MR
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
G PNE+T +S++ C + GD +
Sbjct: 344 SGFQPNEVTCISVLGAC-----------------------------------FRSGDVET 368
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
R +F SI + +AM+S Y+ +E F QM ++P++ T+ +L CA+
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMWNV 367
LE GK IH + + I +++ + + L+ +Y++C ++ + +F + DI WN
Sbjct: 429 LRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 488
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
MISG AL LF M V+ PN+ +F L +CS L G R FH +V
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG-RQFHGLVVK 547
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLL 472
G V + D+ + G +D A++ D +R N V+ ++
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQF-FDAVLRKNTVIWNEMI 592
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 47/406 (11%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RDV+ NA + +VG L A ++FD M ++D VSW+ MI R G ++AL + + M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
PS + S++ ++++D G HG ++ + + +L+ MY KC
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGL--DKNIFVGNALLSMYAKCG 187
Query: 144 NLA-YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV------IPNEI 196
+ Y VF+ S + VS+T +I G N + E +++F M +GV + N +
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 197 TILSLVKECGTVEAL---EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+I + + C ++ + E GK +H LR G + L + +++Y K D A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+ +++ + MI + Q D+ + +M D G +PNE+T +S+L C ++G +E
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
G+ R+F++ + WN M+SG +
Sbjct: 368 TGR-----------------------------------RIFSSIPQPSVSAWNAMLSGYS 392
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
E A+ F +M+ Q + P+ T L +C+ L+ GK++
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 194/434 (44%), Gaps = 55/434 (12%)
Query: 111 GKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFD----------------- 153
GK +HG+++R +S L L+D+Y++C + YAR VFD
Sbjct: 25 GKVIHGFIVRMGM--KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 154 --------------GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
G +VSW MI+ + + + ++ +M +G +P+ T+
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG---DFRSARYVFDSI 256
S++ C V FG H ++ G+ ++ + A + MY KCG D+ VF+S+
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDY--GVRVFESL 200
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK---AGSL- 312
+ + +A+I A+ N + E +F M + G++ + + + ++L + A SL
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 313 -----EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
E+GK IH + G D L SL+++YAK D++ +FA + +++ WN+
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
MI G + ++E M G PN++T I L AC SG ++ G+R+F +
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-- 378
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNVKLG 484
P V + M+ S +EA M ++P+ L +L++C + ++ G
Sbjct: 379 ---PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 485 EWAAGQFLSLESHK 498
+ G + E K
Sbjct: 436 KQIHGVVIRTEISK 449
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 215/381 (56%), Gaps = 5/381 (1%)
Query: 186 MRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
++R+G + + S V+ CG G H L+ G V L ++ + +Y G+
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVL 305
+A VF+ + ++++ +AMIS +AQ +D ++ +M PN+ T +LL
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 306 CAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMW 365
C +G+L G+ +H G+K + SL+ MY KCGD+ +R+F +++D++ W
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 366 NVMISGCAMLGDGEAALELF-VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
N MI+G A G A+ELF + M G P+ IT++G L +C H+GL++EG++ F+ M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
+ GL P++ HY C+VDLL R GLL EA +LI +MPM+PN+V+ GSLL +C++H +V G
Sbjct: 351 -EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 485 EWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGS 544
AA + L LE +V ++N+YA+ W + + +R+ M+D G+ PG S IE+N
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
Query: 545 VHEFIMGDREHPETRRIYEIV 565
V F E R+ EIV
Sbjct: 470 VFMF---KAEDGSNCRMLEIV 487
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 4/273 (1%)
Query: 107 DLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
D + G H ++ S V L +SL+ +Y + A VF+ ++VSWT M
Sbjct: 135 DFRTGSGFHCLALKGGFI--SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAM 192
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
I+G+ ++ ++L+ KMR+ PN+ T +L+ C AL G+ +H TL G+
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIF-V 285
+ ++ + I MY KCGD + A +FD NKD++ ++MI+ YAQ + ++F +
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFEL 312
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M G +P+ IT + +L C AG ++ G+ + + + G+K + + LVD+ + G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 346 DIDTTYRLFAAATDR-DILMWNVMISGCAMLGD 377
+ L + + ++W ++ C + GD
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 13 GARFCC---ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGR 69
G+ F C + GF DV++ ++++++Y + G +E A ++F++M +++ VSW+ MI + +
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 70 NGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSG 128
+D L L MR + P++ +++ L G+++H + + G +S
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL---HMGLKSY 255
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLF-VKMR 187
+ +S SLI MY KC +L A +FD FS +VSW +MIAGY + I LF + M
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+ G P+ IT L ++ C ++ G+ +G+ + + +D+ G+ G +
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 248 SARYVFDSIENK 259
A + +++ K
Sbjct: 376 EALELIENMPMK 387
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 260/523 (49%), Gaps = 29/523 (5%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R + V N++I MYG+ G A LF +D VSW++MI + +NG +A +L +++
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 84 RVARVKPSEIAMISIIHVFAELVD---LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
V+ S+ ++ +++ + L GK++H ++ + + L ++
Sbjct: 487 -VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGD-----------LTSAFL 534
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE-ITIL 199
+ + ++ R + SW ++I+G + + E +R F M REG I ++ IT+L
Sbjct: 535 RLETMSETRD---------LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+ G + + G+ H +++ + L I MYG+C D SA VF I +
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+L + +ISA +Q EVF +F + + PNEIT V LL + GS G H
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGE 379
++ ++G + + + +LVDMY+ CG ++T ++F + I WN +IS G GE
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 380 AALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
A+ELF E+ + + PN +FI L ACSHSG + EG + +M FG+ P EH
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
+VD+L RAG L EA + I + V G+LL+AC H + KLG+ A +E
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEV 541
Y + ++N Y W + +R+ + D + K PG S I+V
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 232/494 (46%), Gaps = 59/494 (11%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
E G D +CNA++ +Y + +L A +F M +D VSW+T++ NG ++L
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ M + + + +I + + +L LG++LHG V+++ ++ V + S+I M
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR-EGVIPNEIT 197
Y KC + A +VF+ ++S ++ G+ E + +M+ + + P+ T
Sbjct: 336 YSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIAT 395
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGI-TISVVLATAFIDMYGKCGDFRSARYVFDSI 256
++S+ CG + G+ +H +T+R + + ++ + + IDMYGKCG A +F +
Sbjct: 396 VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT 455
Query: 257 ENKDLMICSAMISAYAQ---TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
++DL+ ++MISA++Q T+ +F V C + + T++++L C + SL
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCS-KFSLSTVLAILTSCDSSDSLI 514
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY-RLFAAATDRDILMWNVMISGC 372
GK +H ++ K GD+ + + RL + RD+ WN +ISGC
Sbjct: 515 FGKSVHCWLQ-------------------KLGDLTSAFLRLETMSETRDLTSWNSVISGC 555
Query: 373 AMLGDGEAALELFVEMEAQGVIPND-ITFIGALKACSHSGLLQEGKRLFHKM-------- 423
A G +L F M +G I +D IT +G + A + GL+ +G R FH +
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAIKSLREL 614
Query: 424 ---------------------VHDFGLV--PKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
V FGL+ P + + C++ LS+ E +L ++
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK 674
Query: 461 MRPNNVVLGSLLAA 474
+ PN + LL+A
Sbjct: 675 LEPNEITFVGLLSA 688
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 13/416 (3%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
F + G +D+ + ++ YG G L + LFD++ +KD + W++MI +NG
Sbjct: 112 FALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIA 171
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L +M + ++ + L + LH + G S L +L
Sbjct: 172 AVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS--SLCNAL 229
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
+++Y K +NL+ A VF IVSW T++ + + + ++ F M G +
Sbjct: 230 MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADT 289
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGIT--ISVVLATAFIDMYGKCGDFRSARYVF 253
+T ++ C ++E L G+ LH +++G + V + + I MY KCGD +A VF
Sbjct: 290 VTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVF 349
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC-GIRPNEITMVSLLVLCAKAGSL 312
+ + +D++ +A+++ +A +E F I QM I+P+ T+VS+ +C
Sbjct: 350 EELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFS 409
Query: 313 EMGKWIHSYIDKQGIK-RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG 371
G+ +H Y + ++ R ++ S++DMY KCG LF T RD++ WN MIS
Sbjct: 410 REGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISA 469
Query: 372 CAMLGDGEAALELFVEMEAQGVIP--NDITFIGALKACSHSGLLQEGKRLFHKMVH 425
+ G A LF E+ ++ + T + L +C S L +F K VH
Sbjct: 470 FSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSL-----IFGKSVH 520
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 154/369 (41%), Gaps = 7/369 (1%)
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQ-SGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
++ F + + +++H + ++ CG + S+ L+ Y + L + +FD
Sbjct: 93 VLRSFMMRTETETPRSVHCFALK---CGLLQDLATSSKLLTFYGRTGELVSSSCLFDELK 149
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKL 216
++ W +MI + LF++M +G + T+L ++ +
Sbjct: 150 EKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM 209
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
LH + G+ L A +++Y K + SA VF +E++D++ + +++
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK-- 334
+ F M G + +T ++ C+ L +G+ +H + K G + +
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
S++ MY+KCGD + +F RD++ N +++G A G E A + +M++ I
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 395 PNDI-TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
DI T + C +EG+ + V +E ++D+ + GL +A+
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 454 KLIIDMPMR 462
L R
Sbjct: 450 LLFKTTTHR 458
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 212 EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAY 271
E + +H F L+ G+ + ++ + YG+ G+ S+ +FD ++ KD+++ ++MI+A
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
Q +F++M G + T++ + +H + G+ D+
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 332 KLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
L +L+++YAK ++ + +F RDI+ WN +++ C G +L+ F M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK--VEHYGCMVDLLSRAGLL 449
G + +TF + ACS L G+ L H +V G P+ V ++ + S+ G
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESL-HGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 450 DEAQKLIIDMPMR---PNNVVLGSLLA 473
+ A+ + ++ R +N +L A
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAA 369
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 268/516 (51%), Gaps = 47/516 (9%)
Query: 61 STMIRNYGRNGLLDEALDLLRDMRVARVK-PSEIAMISIIHVFAELVD-LKLGKALHGYV 118
S +I+N+ G +AL L +R V P + +I + A +V + LGK LH
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI--LRACACVVPRVVLGKLLHSES 72
Query: 119 MRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNE 178
++ C S V + +SLI MY KC + AR VFD ++ +W MI GY+ +
Sbjct: 73 IKFGVC--SDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 179 GIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH---AFTLRNGITISVVLAT- 234
LF ++ V N +T + ++K G +E + L F L+N SV+L
Sbjct: 131 ASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVY 187
Query: 235 --------------------AFI-----DMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
AF+ Y + GD AR +F + +DL+I + +I+
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
YAQ D+ D F M G P+ +T+ S+L CA++G L++G+ +HS I+ +GI+
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 307
Query: 330 DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
+ + +L+DMYAKCGD++ +F + + R + N MIS A+ G G+ ALE+F ME
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 367
Query: 390 AQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
+ + P++ITFI L AC H G L EG ++F +M + P V+H+GC++ LL R+G L
Sbjct: 368 SLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKL 426
Query: 450 DEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEW------AAGQFLSLESHKCGYNV 503
EA +L+ +M ++PN+ VLG+LL ACK+H + ++ E AG + S+ +
Sbjct: 427 KEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITN--SYSENHLA 484
Query: 504 LMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
+SN+YA +W +R M G+ K PG+SS+
Sbjct: 485 SISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 187/405 (46%), Gaps = 27/405 (6%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
G DV V +++I MYG+ G + AR++FD+M +++ +W+ MI Y NG A L
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 81 RDMRVARVKPSEIAMIS--------------IIHVFAELVDLKLGKALHGYVMRNRNCGQ 126
++ V R + I MI + EL ++K + G + NR
Sbjct: 136 EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMED 195
Query: 127 S-----GVPLSTSLI-----DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
+ +P + + Y + ++ AR++F +V W T+IAGY
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 177 NEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAF 236
++ I F M+ EG P+ +T+ S++ C L+ G+ +H+ GI ++ ++ A
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 315
Query: 237 IDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNE 296
IDMY KCGD +A VF+SI + + C++MIS A E ++F M ++P+E
Sbjct: 316 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE 375
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA 356
IT +++L C G L G I S + Q +K + K L+ + + G + YRL
Sbjct: 376 ITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 435
Query: 357 --ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
D ++ ++ C + D E A ++ +E G I N +
Sbjct: 436 MHVKPNDTVL-GALLGACKVHMDTEMAEQVMKIIETAGSITNSYS 479
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 14 ARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
AR E+ ++ FV + ++ Y +G + AR +F ++ +D V W+T+I Y +NG
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
D+A+D +M+ +P + + SI+ A+ L +G+ +H + N + +S
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI--NHRGIELNQFVSN 313
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP 193
+LIDMY KC +L A SVF+ S S+ +MI+ E + +F M + P
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
+EIT ++++ C +H L G+ I F +M K D + F
Sbjct: 374 DEITFIAVLTAC-----------VHGGFLMEGLKI-------FSEM--KTQDVKPNVKHF 413
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+I ++ + E + + +M+ ++PN+ + +LL C E
Sbjct: 414 -----------GCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTVLGALLGACKVHMDTE 459
Query: 314 MGKWIHSYIDKQG 326
M + + I+ G
Sbjct: 460 MAEQVMKIIETAG 472
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 237/477 (49%), Gaps = 43/477 (9%)
Query: 106 VDLKLGKALHGYVMRNR----------NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGF 155
++ KL + LHG+ R R + L I + N YA VF
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
+++ + MI Y E + F M+ G+ +E T L+K C ++ L FGK
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTN 275
+H +R G + +++Y G A+ VFD + +++++ + MI + +
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 276 CID-------------------------------EVFDIFVQMNDCGIRPNEITMVSLLV 304
++ E ++F +M D G P+E T+V++L
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRD-TKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL 363
+ A G L+ GKWIHS + G+ +D + +LVD Y K GD++ +F R+++
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV 302
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQG-VIPNDITFIGALKACSHSGLLQEGKRLFHK 422
WN +ISG A+ G GE ++LF M +G V PN+ TF+G L CS++G ++ G+ LF
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGL 362
Query: 423 MVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK 482
M+ F L + EHYG MVDL+SR+G + EA K + +MP+ N + GSLL+AC+ H +VK
Sbjct: 363 MMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVK 422
Query: 483 LGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
L E AA + + +E G VL+SN+YA E +W DV +R M+ + K G S+I
Sbjct: 423 LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 180/394 (45%), Gaps = 45/394 (11%)
Query: 32 IIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPS 91
I + G + + ++A ++F + + + + ++ MI+ Y G E+L M+ +
Sbjct: 42 FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD 101
Query: 92 EIAMISIIHVFAELVDLKLGKALHGYVMRN--RNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
E ++ + L DL+ GK +HG ++R G+ + ++++Y + A+
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK----IRIGVVELYTSGGRMGDAQ 157
Query: 150 SVFD---------------GF----------------SGASIVSWTTMIAGYIHTNNLNE 178
VFD GF S SIVSW +MI+ E
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 179 GIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS-VVLATAFI 237
+ LF +M +G P+E T+++++ ++ L+ GK +H+ +G+ + + A +
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 238 DMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNE 296
D Y K GD +A +F ++ ++++ + +IS A + D+F M + G + PNE
Sbjct: 278 DFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNE 337
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSY-IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
T + +L C+ G +E G+ + +++ ++ T+ ++VD+ ++ G I ++
Sbjct: 338 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLK 397
Query: 356 -AATDRDILMWNVMISGCAMLGDGE----AALEL 384
+ + MW ++S C GD + AA+EL
Sbjct: 398 NMPVNANAAMWGSLLSACRSHGDVKLAEVAAMEL 431
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R+V V N +I + + G +E LF +M ++ VSW++MI + + G EAL+L +M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
P E +++++ + A L L GK +H + + + + +L+D Y K
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHS-TAESSGLFKDFITVGNALVDFYCKSG 284
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG-VIPNEITILSLV 202
+L A ++F ++VSW T+I+G GI LF M EG V PNE T L ++
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 203 KEC---GTVEALE--FGKLLHAFTL 222
C G VE E FG ++ F L
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKL 369
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 281/563 (49%), Gaps = 55/563 (9%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
++V A++ Y L A LF +M +++ VSW+TMI Y ++G +D+AL+L +
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 83 MRVARVKPSEIAMISIIHVFAELVDL-KLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVK 141
M E ++S + LV ++ +A++ + R V T+++D K
Sbjct: 166 M-------PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAK 214
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+ AR +FD +I+SW MI GY N ++E +LF V+P
Sbjct: 215 NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF------QVMPER------ 262
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ + ++ F +RN +M CG +FD + K++
Sbjct: 263 -------DFASWNTMITGF-IRNR------------EMNKACG-------LFDRMPEKNV 295
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ + MI+ Y + +E ++F +M D ++PN T VS+L C+ L G+ IH
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 321 YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF--AAATDRDILMWNVMISGCAMLGDG 378
I K +++ + ++L++MY+K G++ ++F RD++ WN MI+ A G G
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 379 EAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
+ A+E++ +M G P+ +T++ L ACSH+GL+++G F +V D L + EHY C
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHK 498
+VDL RAG L + I R + G++L+AC +H V + + + L S
Sbjct: 476 LVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDD 535
Query: 499 CGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPET 558
G VLMSNIYAA K + +++R M++ G+ K+PG S ++V H F++GD+ HP+
Sbjct: 536 AGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQF 595
Query: 559 RRIYEIVAEMREKL-DNVGYTPD 580
+ I++++R K+ N T D
Sbjct: 596 EALDSILSDLRNKMRKNKNVTSD 618
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 177/423 (41%), Gaps = 95/423 (22%)
Query: 38 EVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMIS 97
+VG + AR+LFD + ++D V+W+ +I Y + G DMR AR
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLG----------DMREAR---------- 97
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG 157
EL D R + V T+++ Y++ K L+ A +F
Sbjct: 98 ------ELFD--------------RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
++VSW TMI GY + +++ + LF +M ++ + +LV+ EA+ L
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAM---NLF 194
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCI 277
R+ VV TA +D K G AR +FD + ++++ +AMI+ YAQ N I
Sbjct: 195 ERMPRRD-----VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 278 DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
DE +F M + RD ++
Sbjct: 250 DEADQLFQVMPE---------------------------------------RDFASWNTM 270
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG-VIPN 396
+ + + +++ LF +++++ W MI+G + E AL +F +M G V PN
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 397 DITFIGALKACSHSGLLQEGK---RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
T++ L ACS L EG+ +L K VH + ++++ S++G L A+
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT----SALLNMYSKSGELIAAR 386
Query: 454 KLI 456
K+
Sbjct: 387 KMF 389
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 154/348 (44%), Gaps = 24/348 (6%)
Query: 129 VPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
VP LI K +A AR +FDG +V+WT +I GYI ++ E LF ++
Sbjct: 46 VPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLL-HAFTLRNGITISVVLATAFIDMYGKCGDFR 247
N +T ++V + L ++L RN VV ID Y + G
Sbjct: 106 R---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN-----VVSWNTMIDGYAQSGRID 157
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
A +FD + ++++ ++M+ A Q IDE ++F +M R + ++ +++ A
Sbjct: 158 KALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLA 213
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
K G ++ + + + ++ I +++ YA+ ID +LF +RD WN
Sbjct: 214 KNGKVDEARRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNT 269
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
MI+G + A LF M + VI G ++ + +E +F KM+ D
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN----EEALNVFSKMLRDG 325
Query: 428 GLVPKVEHYGCMVDLLSR-AGLLDEAQ--KLIIDMPMRPNNVVLGSLL 472
+ P V Y ++ S AGL++ Q +LI + N +V +LL
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 235/456 (51%), Gaps = 35/456 (7%)
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM--RREGVIPNEITILSL 201
++ YA VF + + W T+I G+ ++ I +F+ M V P +T S+
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 202 VKECGTVEALEFGKLLHAFTLRNG-------------------------------ITISV 230
K G + G+ LH ++ G I V
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
V + I + KCG A+ +FD + ++ + ++MIS + + + D+F +M +
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
++P+ TMVSLL CA G+ E G+WIH YI + + ++ + T+L+DMY KCG I+
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
+F A + + WN MI G A G E A++LF E+E G+ P+ ++FIG L AC+HS
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
G + F M + + P ++HY MV++L AGLL+EA+ LI +MP+ + V+ S
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 471 LLAACKLHKNVKLGEWAAGQFLSLESHK-CGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
LL+AC+ NV++ + AA L+ + CGY VL+SN YA+ + + + R M++
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGY-VLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIV 565
+ KE G SSIEV+ VHEFI HP++ IY ++
Sbjct: 492 MEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 174/373 (46%), Gaps = 33/373 (8%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR--VKPSEIAMISII 99
+ +A +F ++ K+ W+T+IR + R+ + A+ + DM + VKP + S+
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 100 HVFAELVDLKLGKALHGYVMRN--------RN--------CG-------------QSGVP 130
+ L + G+ LHG V++ RN CG V
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
S+I + KC + A+++FD + VSW +MI+G++ + + +F +M+ +
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
V P+ T++SL+ C + A E G+ +H + +RN ++ ++ TA IDMY KCG
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VF+ K L ++MI A + D+F ++ G+ P+ ++ + +L CA +G
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 311 SLEMG-KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-AATDRDILMWNVM 368
+ ++ +K I+ K T +V++ G ++ L + D ++W+ +
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 369 ISGCAMLGDGEAA 381
+S C +G+ E A
Sbjct: 434 LSACRKIGNVEMA 446
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 45/313 (14%)
Query: 197 TILSLV-KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMY-GKCGDFRSARYVFD 254
T L L+ +C T+ L K +HA ++ G+ V A+ + D A VF
Sbjct: 26 TYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFT 82
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQM--NDCGIRPNEITMVSLLVLCAKAGSL 312
I +K+ + + +I +++++ + IF+ M + ++P +T S+ + G
Sbjct: 83 RINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQA 142
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISG- 371
G+ +H + K+G++ D+ ++ +++ MY CG + +R+F D++ WN MI G
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGF 202
Query: 372 --CAML----------------------------GDGEAALELFVEMEAQGVIPNDITFI 401
C ++ G + AL++F EM+ + V P+ T +
Sbjct: 203 AKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 402 GALKACSHSGLLQEGKRLFHKMVHD-FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP 460
L AC++ G ++G+ + +V + F L V ++D+ + G ++E + P
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCKCGCIEEGLNVFECAP 320
Query: 461 MRP----NNVVLG 469
+ N+++LG
Sbjct: 321 KKQLSCWNSMILG 333
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 252/523 (48%), Gaps = 44/523 (8%)
Query: 6 FISARTRGARFC---------CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKD 56
I A R FC +G R + ++ Y E G + AR++FD+M +D
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 57 AVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHG 116
MI RNG E+LD R+M +K + S++ L+D + GK +H
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHC 141
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
V++ +S + +SLIDMY K + AR VF +V + MI+GY + +
Sbjct: 142 LVLKFSY--ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQA 199
Query: 177 NEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT-LRNGITISVVLATA 235
+E + L M+ G+ P+ IT + L+ F+ +RN +S +L
Sbjct: 200 DEALNLVKDMKLLGIKPDVIT---------------WNALISGFSHMRNEEKVSEILELM 244
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
+D Y D++ +++IS ++ FD F QM G+ PN
Sbjct: 245 CLDGY-----------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA 355
T+++LL C ++ GK IH Y G++ ++++L+DMY KCG I LF
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQE 415
+ + +N MI A G + A+ELF +MEA G + +TF L ACSH+GL
Sbjct: 348 KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDL 407
Query: 416 GKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC 475
G+ LF M + + +VP++EHY CMVDLL RAG L EA ++I M M P+ V G+LLAAC
Sbjct: 408 GQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAAC 467
Query: 476 KLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV 518
+ H N++L AA LE G +L++++YA W V
Sbjct: 468 RNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 190/417 (45%), Gaps = 38/417 (9%)
Query: 186 MRREGVIPNEITILSLVKECGTVEA------LEFGKLLHAFTLRNGITISVVLATAFIDM 239
M++ ++P+ +LS+ +EA G++LHA + +GI +A +
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 240 YGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
Y +CG AR VFD + +D+ C MI A A+ E D F +M G++ + +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 300 VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD 359
SLL E GK IH + K + D + +SL+DMY+K G++ ++F+ +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 360 RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
+D++++N MISG A + AL L +M+ G+ P+ IT+ + SH ++ +
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ--------KLIIDMPMRPNNVVLGSL 471
M D G P V + ++ +GL+ Q K ++ + PN+ + +L
Sbjct: 241 LELMCLD-GYKPDVVSWTSII-----SGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 472 LAACKLHKNVKLGEWAAGQFL--SLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
L AC +K G+ G + LE H + L+ ++Y K G +S+ R
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL-DMYG---KCGFISEAMILFR--- 347
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMR---EKLDNVGYTPDISA 583
K P +++ N + + H + E+ +M EKLD++ +T ++A
Sbjct: 348 --KTPKKTTVTFNSMIFCY----ANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 229/417 (54%), Gaps = 15/417 (3%)
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG--ASIVSWTTMIAGYIHTN 174
Y++RN N G +S+ L+ +Y C A VFD S +S +W ++I+GY
Sbjct: 121 YLLRN-NLG-----ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELG 174
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ + L+ +M +GV P+ T ++K CG + +++ G+ +H ++ G V +
Sbjct: 175 QYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN 234
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
A + MY KCGD AR VFD I +KD + ++M++ Y + E DIF M GI P
Sbjct: 235 ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEP 294
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
+++ + S+L A+ S + G+ +H ++ ++G++ + + +L+ +Y+K G + +F
Sbjct: 295 DKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIF 351
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
+RD + WN +IS + +G L+ F +M P+ ITF+ L C+++G+++
Sbjct: 352 DQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVE 408
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII-DMPMRPNNVVLGSLLA 473
+G+RLF M ++G+ PK+EHY CMV+L RAG+++EA +I+ +M + V G+LL
Sbjct: 409 DGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLY 468
Query: 474 ACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
AC LH N +GE AA + LE L+ IY+ + DV +R+ M D G+
Sbjct: 469 ACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 191/375 (50%), Gaps = 24/375 (6%)
Query: 28 VCNAIIMMYGEVGSLEFARQLFDKMVDKDA--VSWSTMIRNYGRNGLLDEALDLLRDMRV 85
+ + ++ +Y G E A ++FD+M +D+ +W+++I Y G ++A+ L M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSG----VPLSTSLIDMYVK 141
VKP ++ + +++G+A+H R+ + G V + +L+ MY K
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIH------RDLVKEGFGYDVYVLNALVVMYAK 242
Query: 142 CKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
C ++ AR+VFD VSW +M+ GY+H L+E + +F M + G+ P+++ I S+
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ V + + G+ LH + +R G+ + +A A I +Y K G A ++FD + +D
Sbjct: 303 L---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ +A+ISA+++ + F QM+ +P+ IT VS+L LCA G +E G+ + S
Sbjct: 360 VSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSL 416
Query: 322 IDKQ-GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA--ATDRDILMWNVMISGCAMLGD- 377
+ K+ GI + +V++Y + G ++ Y + + +W ++ C + G+
Sbjct: 417 MSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNT 476
Query: 378 --GEAALELFVEMEA 390
GE A + E+E
Sbjct: 477 DIGEVAAQRLFELEP 491
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 126/236 (53%), Gaps = 9/236 (3%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R + GF DV+V NA+++MY + G + AR +FD + KD VSW++M+ Y +GLL
Sbjct: 219 RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLH 278
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EALD+ R M ++P ++A+ S V A ++ K G+ LHG+V+ R + + ++ +
Sbjct: 279 EALDIFRLMVQNGIEPDKVAISS---VLARVLSFKHGRQLHGWVI--RRGMEWELSVANA 333
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LI +Y K L A +FD VSW +I+ H+ N N G++ F +M R P+
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA--HSKNSN-GLKYFEQMHRANAKPD 390
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSA 249
IT +S++ C +E G+ L + + GI + +++YG+ G A
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITM-VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRD 330
Q +D V GI E + SLL C +++ G +H I ++ +
Sbjct: 67 TQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 126
Query: 331 TKLKTSLVDMYAKCGDIDTTYRLFAAATDRD--ILMWNVMISGCAMLGDGEAALELFVEM 388
+ + LV +YA CG + + +F + RD WN +ISG A LG E A+ L+ +M
Sbjct: 127 LGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQM 186
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD---------------------- 426
GV P+ TF LKAC G +Q G+ + +V +
Sbjct: 187 AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDI 246
Query: 427 ------FGLVPKVEH--YGCMVDLLSRAGLLDEAQ---KLIIDMPMRPNNVVLGSLLA 473
F ++P ++ + M+ GLL EA +L++ + P+ V + S+LA
Sbjct: 247 VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 258/501 (51%), Gaps = 16/501 (3%)
Query: 45 ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAE 104
A LFD++ +D S ++ + ++ R+G ++ L L + A S ++ +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 105 LVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWT 164
L + G+ +H +++ ++G T+LIDMY K +L + VF+ +VSW
Sbjct: 97 LSYPETGRQVHALMIKQG--AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 165 TMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRN 224
+++G++ E + +F M RE V +E T+ S+VK C +++ L+ GK +HA +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 225 GITISVVLATAFIDMYGKCGDFRSARYVFDSIE-NKDLMICSAMISAYAQTNCIDEVFDI 283
G + VVL TA I Y G A V++S+ + D ++ +++IS + E F +
Sbjct: 215 GRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
+ RPN + S L C+ L +GK IH + G D+KL L+DMY K
Sbjct: 274 MSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 344 CGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM--EAQGVIPNDITFI 401
CG I +F A + ++ W MI A+ GDG ALE+F EM E GV+PN +TF+
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 402 GALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPM 461
+ AC+H+GL++EGK F M + LVP EHY C +D+LS+AG +E +L+ M
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 462 RPNN----VVLGSLLAACKLHKNVKLGEWAAGQFL-SLESHKCGYNVLMSNIYAAENKWG 516
N + ++L+AC L+ ++ GE+ A + + VL+SN YAA KW
Sbjct: 449 NDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 517 DVSDIRRAMRDAGISKEPGVS 537
V ++R +++ G+ K G S
Sbjct: 509 VVEELRGKLKNKGLVKTAGHS 529
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 170/354 (48%), Gaps = 17/354 (4%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVK 89
A+I MY + G L + ++F+ + +KD VSW+ ++ + RNG EAL + M RV+
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
SE + S++ A L L+ GK +H V+ G+ V L T++I Y + A
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVT---GRDLVVLGTAMISFYSSVGLINEAM 239
Query: 150 SVFDGFS-GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV 208
V++ + V ++I+G I N E L + R PN + S + C
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDN 294
Query: 209 EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMI 268
L GK +H LRNG L +DMYGKCG AR +F +I +K ++ ++MI
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 269 SAYAQTNCIDEVFDIFVQMND--CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI-DKQ 325
AYA + +IF +M + G+ PN +T + ++ CA AG ++ GK + +K
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD-----ILMWNVMISGCAM 374
+ T+ +D+ +K G+ + +RL + D +W ++S C++
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSL 468
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
+ ++VL FI + D ++FD + +DL ++ +S++ ++ ++ +F+Q
Sbjct: 20 STNLVLRCVFIRNFATHAD-----HLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ 74
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
++ + T +L C+ E G+ +H+ + KQG + T KT+L+DMY+K G
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGH 134
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
+ + R+F + ++D++ WN ++SG G G+ AL +F M + V ++ T +K
Sbjct: 135 LVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
C+ +LQ+GK++ H MV G V M+ S GL++EA K+ + + + V
Sbjct: 195 CASLKILQQGKQV-HAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV 252
Query: 467 VLGSLLAACKLHKNVK 482
+L SL++ C ++N K
Sbjct: 253 MLNSLISGCIRNRNYK 268
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 11/334 (3%)
Query: 132 STSLIDMYVKCKNLA-YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
ST+L+ V +N A +A +FD + S + ++ ++ + N N+ + LF+++ R
Sbjct: 20 STNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS 79
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ T ++ C + E G+ +HA ++ G + TA IDMY K G +
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 251 YVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
VF+S+E KDL+ +A++S + + E +F M + +E T+ S++ CA
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 311 SLEMGKWIHSYIDKQGIKRD-TKLKTSLVDMYAKCGDIDTTYRLF-AAATDRDILMWNVM 368
L+ GK +H+ + G RD L T+++ Y+ G I+ +++ + D +M N +
Sbjct: 200 ILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
ISGC E F+ M Q PN +L CS + L GK++ H + G
Sbjct: 258 ISGCI---RNRNYKEAFLLMSRQR--PNVRVLSSSLAGCSDNSDLWIGKQI-HCVALRNG 311
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
V + ++D+ + G + +A+ + +P +
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
NGF D +CN ++ MYG+ G + AR +F + K VSW++MI Y NG +AL++
Sbjct: 310 NGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEI 369
Query: 80 LRDM--RVARVKPSEIAMISIIHVFAELVDLKLGKALHG 116
R+M + V P+ + + +I A +K GK G
Sbjct: 370 FREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG 408
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 221/434 (50%), Gaps = 39/434 (8%)
Query: 145 LAYARSVFDGFSGASIVSWTTMIA-GYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
++YA SVF + S + T+I +H + R FV+MRR V P+ T + K
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 204 ECGT-------------VEALEFGKLLHAFTLRNGITI--------------------SV 230
C +AL FG L FTL I + V
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
V ID K + AR +FDS+ +DL+ +++IS YAQ N E +F +M
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL 243
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
G++P+ + +VS L CA++G + GK IH Y ++ + D+ L T LVD YAKCG IDT
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
+F +D+ + WN MI+G AM G+GE ++ F +M + G+ P+ +TFI L CSHS
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN----V 466
GL+ E + LF +M + + +++HYGCM DLL RAGL++EA ++I MP N +
Sbjct: 364 GLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL 423
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAM- 525
LL C++H N+++ E AA + +L G +M +YA +W +V +R +
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIID 483
Query: 526 RDAGISKEPGVSSI 539
RD + K G S +
Sbjct: 484 RDKKVKKNVGFSKV 497
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 6/262 (2%)
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
Q V LID VK + + AR +FD +VSW ++I+GY N+ E I+LF +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 186 MRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
M G+ P+ + I+S + C + GK +H +T R + I LAT +D Y KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 246 FRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVL 305
+A +F+ +K L +AMI+ A + D F +M GI+P+ +T +S+LV
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 306 CAKAGSLEMGKWIHSYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-----AATD 359
C+ +G ++ + + + + R+ K + D+ + G I+ +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 360 RDILMWNVMISGCAMLGDGEAA 381
+L W+ ++ GC + G+ E A
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIA 441
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
RDV N +I + + AR+LFD M +D VSW+++I Y + EA+ L +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
M +KP +A++S + A+ D + GKA+H Y R R S L+T L+D Y KC
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF--LATGLVDFYAKC 297
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
+ A +F+ S ++ +W MI G N + F KM G+ P+ +T +S++
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 203 KECG 206
C
Sbjct: 358 VGCS 361
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 258/562 (45%), Gaps = 87/562 (15%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RD F N +I Y + + A LF+KM +++AVSWS MI + +NG +D A+ L R M
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 84 RVARVKP--------------SEIAMI------------SIIHVFAELV-------DLKL 110
V P SE A + +++ + L+ ++
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEA 253
Query: 111 GKAL-----------HGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
+ L HG R R C V S+I Y+K ++ AR +FD
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFC--KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHA 219
+SW TMI GY+H + + + LF +M PN + H+
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEM------PN--------------------RDAHS 345
Query: 220 FTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDE 279
+ + + Y G+ AR+ F+ K + +++I+AY + E
Sbjct: 346 WNM-------------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 280 VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
D+F++MN G +P+ T+ SLL +L +G +H + K I D + +L+
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALIT 451
Query: 340 MYAKCGDIDTTYRLF-AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
MY++CG+I + R+F R+++ WN MI G A G+ AL LF M++ G+ P+ I
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
TF+ L AC+H+GL+ E K F M+ + + P++EHY +V++ S G +EA +I
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 459 MPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV 518
MP P+ V G+LL AC+++ NV L AA LE VL+ N+YA W +
Sbjct: 572 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Query: 519 SDIRRAMRDAGISKEPGVSSIE 540
S +R M I KE G S ++
Sbjct: 632 SQVRMNMESKRIKKERGSSWVD 653
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
+RD N ++ Y VG++E AR F+K +K VSW+++I Y +N EA+DL
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 83 MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
M + KP + S++ LV+L+LG +H V++ VP+ +LI MY +C
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV---IPDVPVHNALITMYSRC 456
Query: 143 KNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+ +R +FD +++W MI GY N +E + LF M+ G+ P+ IT +S+
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 202 VKEC---GTVE--ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
+ C G V+ +F ++ + I + ++ +++ G F A Y+ S+
Sbjct: 517 LNACAHAGLVDEAKAQFVSMMSVYK----IEPQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Query: 257 E-NKDLMICSAMISA 270
D + A++ A
Sbjct: 573 PFEPDKTVWGALLDA 587
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 161/405 (39%), Gaps = 63/405 (15%)
Query: 128 GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
G + ++ ++ +A AR +F+ + V+W TMI+GY+ +N+ +LF M
Sbjct: 39 GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 188 REGVIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
+ V+ T++S CG + LE KL R+ + + +++ Y K
Sbjct: 99 KRDVVTWN-TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG-----YAKNRRI 152
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN----------DCGIRPNE 296
A +F+ + ++ + SAMI+ + Q +D +F +M G+ NE
Sbjct: 153 GEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE 212
Query: 297 I------------TMVS-----------LLVLCAKAGSLEMGKWIHSYI------DKQGI 327
++VS L+V + G +E + + I D G
Sbjct: 213 RLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGE 272
Query: 328 KRDTKLK-----TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAAL 382
R+ K S++ Y K GD+ + LF DRD + WN MI G + E A
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
LF EM + ++ G + G ++ + F K + + ++
Sbjct: 333 ALFSEMPNRDAHSWNMMVSG----YASVGNVELARHYFEKTPEKHTV-----SWNSIIAA 383
Query: 443 LSRAGLLDEAQKLIIDMPM---RPNNVVLGSLLAACKLHKNVKLG 484
+ EA L I M + +P+ L SLL+A N++LG
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 160/429 (37%), Gaps = 96/429 (22%)
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN---LNEGIRLFVKMRREG 190
++I YVK + + AR +FD +V+W TMI+GY+ L E +LF +M
Sbjct: 76 TMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRD 135
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
I K EAL L RN ++ S A I + + G+ SA
Sbjct: 136 SFSWNTMISGYAKNRRIGEAL---LLFEKMPERNAVSWS-----AMITGFCQNGEVDSAV 187
Query: 251 YVFDSIENKD-------------------------------------LMICSAMISAYAQ 273
+F + KD + + +I Y Q
Sbjct: 188 VLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQ 247
Query: 274 TNCIDEVFDIFVQMND-CG----------IRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
++ +F Q+ D CG N ++ S++ K G + + +
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD-- 305
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLG------ 376
Q RDT +++D Y ++ + LF+ +RD WN+M+SG A +G
Sbjct: 306 --QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELAR 363
Query: 377 -------------------------DGEAALELFVEMEAQGVIPNDITFIGALKACSHSG 411
D + A++LF+ M +G P+ T L A +
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV 423
Query: 412 LLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSL 471
L+ G ++ +V ++P V + ++ + SR G + E++++ +M ++ + ++
Sbjct: 424 NLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAM 481
Query: 472 LAACKLHKN 480
+ H N
Sbjct: 482 IGGYAFHGN 490
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 208/411 (50%), Gaps = 36/411 (8%)
Query: 163 WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTL 222
+ T+I Y+ T + LF M V PN +T SL+K + ++ +G LH L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFD 282
+ G + T+F+ YG+ GD S+R +FD I N ++ C++++ A + +D F+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 283 IF----------------------------------VQMNDCGIRPNEITMVSLLVLCAK 308
F +Q I PNE T VS+L CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 309 --AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
G + +GK IH Y+ + I T L T+L+DMY K GD++ +F D+ + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
+IS A G + ALE+F M++ V PN IT + L AC+ S L+ G +LF + +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEW 486
+ ++P EHYGC+VDL+ RAGLL +A I +P P+ VLG+LL ACK+H+N +LG
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 487 AAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
Q + L+ CG V +S A ++ W + +R+AM +AGI K P S
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 34/302 (11%)
Query: 55 KDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKAL 114
K ++T+IR+Y G +L L M + V+P+ + S+I + G AL
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 115 HGYVMRN-------------RNCGQSG----------------VPLSTSLIDMYVKCKNL 145
HG ++ R G+ G V SL+D + +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM---RREGVIPNEITILSLV 202
YA F +VSWTT+I G+ + + +F +M R + PNE T +S++
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 203 KECGTVE--ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
C + + GK +H + + I ++ L TA +DMYGK GD A +FD I +K
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHS 320
+ +A+ISA A + ++F M + PN IT++++L CA++ +++G + S
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 321 YI 322
I
Sbjct: 349 SI 350
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM-- 83
V CN+++ G G +++A + F +M D VSW+T+I + + GL +AL + +M
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 84 -RVARVKPSEIAMISIIHVFAELVD--LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
A + P+E +S++ A ++LGK +HGYVM + + T+L+DMY
Sbjct: 212 NERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL--GTALLDMYG 269
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K +L A ++FD + +W +I+ + + +F M+ V PN IT+L+
Sbjct: 270 KAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
Query: 201 LVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE-N 258
++ C + ++ G +L + I + +D+ G+ G A S+
Sbjct: 330 ILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFE 389
Query: 259 KDLMICSAMISA 270
D + A++ A
Sbjct: 390 PDASVLGALLGA 401
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
+ + +I +Y T +F M ++PN +T SL+ + S+ G +H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 323 DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD----------------------- 359
K+G D ++TS V Y + GD++++ ++F +
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 360 --------RDILMWNVMISGCAMLGDGEAALELFVEM---EAQGVIPNDITFIGALKACS 408
D++ W +I+G + G AL +F EM E + PN+ TF+ L +C+
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 409 H--SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
+ G ++ GK++ H V ++ ++D+ +AG L+ A
Sbjct: 233 NFDQGGIRLGKQI-HGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 235/438 (53%), Gaps = 5/438 (1%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
++ N +I +G L +AR++FD M +K+ V+W+ MI Y + GL DEA L D
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 86 ARVK-PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
++ +E + ++++ + + +LG+ +HG +++ G + + +SL+ Y +C
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVK---VGVGNLIVESSLVYFYAQCGE 233
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
L A FD ++SWT +I+ + + I +F+ M +PNE T+ S++K
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKA 293
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
C +AL FG+ +H+ ++ I V + T+ +DMY KCG+ R VFD + N++ +
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+++I+A+A+ +E +F M + N +T+VS+L C G+L +GK +H+ I K
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
I+++ + ++LV +Y KCG+ + + RD++ W MISGC+ LG AL+
Sbjct: 414 NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
EM +GV PN T+ ALKAC++S L G+ + H + + V ++ + +
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYA 532
Query: 445 RAGLLDEAQKLIIDMPMR 462
+ G + EA ++ MP +
Sbjct: 533 KCGFVSEAFRVFDSMPEK 550
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 206/383 (53%), Gaps = 2/383 (0%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
++ V ++++ Y + G L A + FD M +KD +SW+ +I R G +A+ + M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 85 VARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKN 144
P+E + SI+ +E L+ G+ +H V++ ++ V + TSL+DMY KC
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMI--KTDVFVGTSLMDMYAKCGE 334
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
++ R VFDG S + V+WT++IA + E I LF M+R +I N +T++S+++
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
CG+V AL GK LHA ++N I +V + + + +Y KCG+ R A V + ++D++
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+AMIS + E D +M G+ PN T S L CA + SL +G+ IHS K
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
+ + ++L+ MYAKCG + +R+F + +++++ W MI G A G AL+L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 385 FVEMEAQGVIPNDITFIGALKAC 407
MEA+G +D F L C
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTC 597
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+N ++V++ + ++ +Y + G A + ++ +D VSW+ MI G EALD
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L++M V+P+ S + A L +G+++H +N S V + ++LI M
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH--ALSNVFVGSALIHM 530
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC ++ A VFD ++VSW MI GY E ++L +M EG ++
Sbjct: 531 YAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Query: 199 LSLVKECGTVE 209
+++ CG +E
Sbjct: 591 ATILSTCGDIE 601
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 259/553 (46%), Gaps = 57/553 (10%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRD 82
++V +++ Y G + A +LF +M +++ VSW+ MI + N L EAL L +
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 83 MR--VARVKPSEIAMISIIHVFAEL-VDLK-LGKALHGYVMRNRNCGQSGVP----LSTS 134
M+ V V P+ +IS+ + L V+ + LG+ LH V+ N G V L+ S
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN---GWETVDHDGRLAKS 344
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L+ MY +A A+S+ + + S +I Y+ +L LF ++
Sbjct: 345 LVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERV-------- 394
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
K LH V T+ ID Y + GD A +F
Sbjct: 395 --------------------KSLH----------DKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ +KD + + MIS Q E + M CG++P T LL +L+
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 315 GKWIHSYIDKQGIKRDTKL--KTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC 372
GK IH I K D L + SLV MYAKCG I+ Y +FA +D + WN MI G
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 373 AMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPK 432
+ G + AL LF EM G PN +TF+G L ACSHSGL+ G LF M + + P
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 433 VEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVK----LGEWAA 488
++HY M+DLL RAG L EA++ I +P P++ V G+LL C L+ K + E AA
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 664
Query: 489 GQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEF 548
+ L L+ +V + N+YA + ++R+ M G+ K PG S + VNG + F
Sbjct: 665 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVF 724
Query: 549 IMGDREHPETRRI 561
+ GD+ E ++
Sbjct: 725 LSGDKSASEAAQM 737
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 198/473 (41%), Gaps = 76/473 (16%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
V +++ Y + G L+ AR LF+ M +++ V+ + M+ Y + ++EA L R+M
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-- 134
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGY-VMRNRNCGQSGVPLSTSLIDMYVKCKN 144
P + +++ + A D + A+ + M RN V +L+ ++ +
Sbjct: 135 ----PKNVVSWTVM-LTALCDDGRSEDAVELFDEMPERN-----VVSWNTLVTGLIRNGD 184
Query: 145 LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE 204
+ A+ VFD +VSW MI GYI + + E LF M + V +T S+V
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMV-- 238
Query: 205 CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC--GDFRSARYVFDSIENKDLM 262
YG C GD R A +F + ++++
Sbjct: 239 -----------------------------------YGYCRYGDVREAYRLFCEMPERNIV 263
Query: 263 ICSAMISAYAQTNCIDEVFDIFVQMND--CGIRPNEITMVSLLVLCAKAGS--LEMGKWI 318
+AMIS +A E +F++M + PN T++SL C G +G+ +
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 319 HSYIDKQG---IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
H+ + G + D +L SLV MYA G I + L + D+ N++I+
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLKN 381
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
GD E A LF +++ + + +++ + +G + LF K+ G+ V
Sbjct: 382 GDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV-- 436
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLGSLLAACKLHKNVKLGE 485
M+ L + L EA L+ DM ++P N LL++ N+ G+
Sbjct: 437 ---MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 218/399 (54%), Gaps = 21/399 (5%)
Query: 185 KMRREGVIPNEITILSLVKECGTVEALEF-GKLLHAFTLRNGITISVVLATAFIDMYGKC 243
+ R+ + ++L +K +A G+ +HA + G + + T+ + Y
Sbjct: 54 RFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSV 113
Query: 244 GDFRSARYVFDSI-ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
GD AR VFD E +++++ +AMISAY + E ++F +M I + + +
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKR------DTKLKTSLVDMYAKCGDIDTTYRLFAA 356
L CA G+++MG+ I+S + IKR D L+ SL++MY K G+ + +LF
Sbjct: 174 LSACADLGAVQMGEEIYS----RSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 357 ATDRDILMWNVMISGCAMLGDGEAALELFVEM----EAQGVI--PNDITFIGALKACSHS 410
+ +D+ + MI G A+ G + +LELF +M ++Q + PND+TFIG L ACSHS
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
GL++EGKR F M+ D+ L P+ H+GCMVDL R+G L +A + I MP++PN V+ +
Sbjct: 290 GLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRT 349
Query: 471 LLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
LL AC LH NV+LGE + L+ G V +SNIYA++ W + S +R +R
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK--- 406
Query: 531 SKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMR 569
+ PG S IE+ ++EF+ G + E + EI +R
Sbjct: 407 RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLR 445
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK-DAVSWSTMIRNYGRNGLLDEALDL 79
GF+ + + +++ Y VG +++ARQ+FD+ +K + V W+ MI Y N EA++L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ M +++ + + + A+L +++G+ ++ ++ + + L SL++MY
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR-----REGVI-P 193
VK AR +FD + ++T+MI GY E + LF KM+ ++ VI P
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITP 274
Query: 194 NEITILSLVKECGTVEALEFGKL-LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
N++T + ++ C +E GK + + + +D++ + G + A
Sbjct: 275 NDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEF 334
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
+N I+PN + +LL C+ G++
Sbjct: 335 ----------------------------------INQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 313 EMGKWIHSYI 322
E+G+ + I
Sbjct: 361 ELGEEVQRRI 370
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 271/525 (51%), Gaps = 18/525 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDK--MVDKDAVSWSTMIRNYGRNGL-LDEAL 77
GF V NA+I MY + A +F++ + +D V+++ +I G G DE+L
Sbjct: 219 GFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID--GLAGFKRDESL 276
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLID 137
+ R M A ++P+++ +S++ +G +HG ++ + +S + +
Sbjct: 277 LVFRKMLEASLRPTDLTFVSVM---GSCSCAAMGHQVHGLAIKTGY--EKYTLVSNATMT 331
Query: 138 MYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
MY ++ A VF+ +V+W TMI+ Y + ++ +M GV P+E T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
SL+ ++ LE ++ A ++ G++ + ++ A I Y K G A +F+
Sbjct: 392 FGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR--PNEITMVSLLVLCAKAGSLEMG 315
K+L+ +A+IS + E + F + + +R P+ T+ +LL +C SL +G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
H+Y+ + G ++T + +L++MY++CG I + +F +++D++ WN +IS +
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 376 GDGEAALELFVEMEAQG-VIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G+GE A+ + M+ +G VIP+ TF L ACSH+GL++EG +F+ MV G++ V+
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVD 628
Query: 435 HYGCMVDLLSRAGLLDEAQKL--IIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFL 492
H+ C+VDLL RAG LDEA+ L I + + V +L +AC H ++KLG+ A +
Sbjct: 629 HFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 493 SLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
E V +SNIYA W + + RRA+ G K+ G S
Sbjct: 689 EKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 190/381 (49%), Gaps = 15/381 (3%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G+ + V NA + MY A ++F+ + +KD V+W+TMI +Y + L A+
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
+ + M + VKP E S++ A +DL + + + +++ S + +S +LI
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGL--SSKIEISNALISA 430
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV--IPNEI 196
Y K + A +F+ +++SW +I+G+ H EG+ F + V +P+
Sbjct: 431 YSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAY 490
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T+ +L+ C + +L G HA+ LR+G ++ A I+MY +CG +++ VF+ +
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG-IRPNEITMVSLLVLCAKAGSLEMG 315
KD++ +++ISAY++ + + + M D G + P+ T ++L C+ AG +E G
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 316 KWI-HSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD---RDILMWNVMISG 371
I +S ++ G+ R+ + LVD+ + G +D L + + +W + S
Sbjct: 611 LEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSA 670
Query: 372 CAMLGD---GEAALELFVEME 389
CA GD G+ +L +E E
Sbjct: 671 CAAHGDLKLGKMVAKLLMEKE 691
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 218/460 (47%), Gaps = 19/460 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVS-WSTMIRNYGRNGLLDEALDLLRDM 83
DV+ ++ ++G +E+A ++FDKM ++D V+ W+ MI +G + +++L R+M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
V+ + +I+ + + L GK +H V++ S V +LI MY C+
Sbjct: 182 HKLGVRHDKFGFATILSM-CDYGSLDFGKQVHSLVIKAGFFIASSVV--NALITMYFNCQ 238
Query: 144 NLAYARSVFDGFSGA--SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
+ A VF+ A V++ +I G + +E + +F KM + P ++T +S+
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSV 297
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ C G +H ++ G +++ A + MY DF +A VF+S+E KDL
Sbjct: 298 MGSCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDL 354
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ + MIS+Y Q ++ +M+ G++P+E T SLL LEM + +
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQAC 411
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAA 381
I K G+ ++ +L+ Y+K G I+ LF + ++++ WN +ISG G
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 382 LELF---VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC 438
LE F +E E + ++P+ T L C + L G + H V G +
Sbjct: 472 LERFSCLLESEVR-ILPDAYTLSTLLSICVSTSSLMLGSQT-HAYVLRHGQFKETLIGNA 529
Query: 439 MVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
++++ S+ G + + ++ M + + V SL++A H
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRH 568
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 151/374 (40%), Gaps = 69/374 (18%)
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVI-PNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
+ G + ++LF + R + P++ ++ + + FG +H + +R+G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 226 ITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID---EVFD 282
+ ++ + +Y + G+ S + FD I+ D+ + ++SA + I+ EVFD
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 283 -----------------------------IFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
+F +M+ G+R ++ ++L +C GSL+
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLD 206
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD---RDILMWNVMIS 370
GK +HS + K G + + +L+ MY C + +F TD RD + +NV+I
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF-EETDVAVRDQVTFNVVID 265
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSG------------------L 412
G A E+ L +F +M + P D+TF+ + +CS + L
Sbjct: 266 GLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL 324
Query: 413 LQEGKRLFHKMVHDFGLVPKVEH---------YGCMVDLLSRAGLLDEAQKLIIDMPM-- 461
+ + DFG KV + M+ ++A L A + M +
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 462 -RPNNVVLGSLLAA 474
+P+ GSLLA
Sbjct: 385 VKPDEFTFGSLLAT 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 45/69 (65%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ +G ++ + NA+I MY + G+++ + ++F++M +KD VSW+++I Y R+G +
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 76 ALDLLRDMR 84
A++ + M+
Sbjct: 574 AVNTYKTMQ 582
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 260/530 (49%), Gaps = 15/530 (2%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNY-GRNGLLD 74
F + G + +F+ N ++ Y ++ + A +LFD+M ++ V+W+ +I R+G +
Sbjct: 61 FMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTN 120
Query: 75 EALDL----LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
L L + V ++ + +I + + ++K G LH +M + S P
Sbjct: 121 HRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC-LMVKQGLESSCFP 179
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM--RR 188
STSL+ Y KC + AR VF+ +V W +++ Y+ ++E L M +
Sbjct: 180 -STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
+ T SL+ C +E GK +HA + + +ATA ++MY K
Sbjct: 239 NRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
AR F+S+ ++++ +AMI +AQ E +F QM ++P+E+T S+L CAK
Sbjct: 295 ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
++ K + + + K+G + SL+ Y++ G++ F + + D++ W +
Sbjct: 355 FSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSV 414
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
I A G E +L++F M Q + P+ ITF+ L ACSH GL+QEG R F +M +
Sbjct: 415 IGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYK 473
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA 488
+ + EHY C++DLL RAG +DEA ++ MP P+ L + C +H+ + +W A
Sbjct: 474 IEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGA 533
Query: 489 GQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIR-RAMRDAGISKEPGVS 537
+ L +E K ++SN Y +E W + +R R R+ K PG S
Sbjct: 534 KKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 214/545 (39%), Gaps = 119/545 (21%)
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQ---- 273
H F ++ GI S+ L + Y K +F A +FD + ++++ + +I Q
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 274 TNCIDEV-FDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
TN + F ++ + + ++ + L+ LC + +++ G +H + KQG++
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 333 LKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM--EA 390
TSLV Y KCG I R+F A DRD+++WN ++S + G + A L M +
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 391 QGVIPNDITFIGALKAC-------------------------------SHSGLLQEGKRL 419
+ TF L AC + S L + +
Sbjct: 239 NRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLGSLLAACK 476
F MV V V + M+ ++ G EA +L M ++P+ + S+L++C
Sbjct: 299 FESMV-----VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 477 LHKNVKLGEWAAGQFLSLESHKCGYNVL--MSNIYAAENKWGDVSD-------IRR---- 523
+ W Q ++ + K + L +++ ++ ++ G++S+ IR
Sbjct: 354 KFSAI----WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 524 -------AMRDAGISKEP--------------GVSSIEV------NGSVHEFIMGDREHP 556
A+ G ++E ++ +EV G V E G R
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQE---GLRCFK 466
Query: 557 ETRRIYEIVAE------MREKLDNVGYTPDISAVLMNIDGEEKETAL-------NYHSEK 603
Y+I AE + + L G+ + S VL ++ E AL N H ++
Sbjct: 467 RMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKR 526
Query: 604 LAMAYG---LISVAPGAPIR--IVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFK 658
+M +G L+ + P P+ I+ N V + + N LL + R+R ++ K
Sbjct: 527 ESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK--------RERRNCYNPK 578
Query: 659 EGSCS 663
CS
Sbjct: 579 TPGCS 583
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 212/416 (50%), Gaps = 34/416 (8%)
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL-VKECGTVEALEFG 214
S ++S T ++ Y + N + + LF++M +P + + SL +K C G
Sbjct: 8 SCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 215 KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQT 274
+HA ++++ + + A +DMYGKC AR +FD I ++ ++ +AMIS Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 275 NCIDEVFDIFVQMN---------------------------------DCGIRPNEITMVS 301
+ E +++ M+ + +PN IT+++
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD 361
L+ C+ G+ + K IHSY + I+ +LK+ LV+ Y +CG I +F + DRD
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
++ W+ +IS A+ GD E+AL+ F EME V P+DI F+ LKACSH+GL E F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 422 KMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNV 481
+M D+GL +HY C+VD+LSR G +EA K+I MP +P G+LL AC+ + +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 482 KLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVS 537
+L E AA + L +E VL+ IY + + + +R M+++G+ PG S
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 180/410 (43%), Gaps = 55/410 (13%)
Query: 58 VSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISI-IHVFAELVDLKLGKALHG 116
+S + + +Y G ++AL+L M + P + + S+ + A LG ++H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 117 YVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNL 176
+ +++ V +L+DMY KC ++++AR +FD + V W MI+ Y H +
Sbjct: 73 HSVKSNFLSNPFV--GCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 177 NEGIRLFVKMRREGVIPNE------------------------------------ITILS 200
E + L+ M V+PNE IT+L+
Sbjct: 131 KEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
LV C + A K +H++ RN I L + ++ YG+CG + VFDS+E++D
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 261 LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG-SLEMGKWIH 319
++ S++ISAYA + F +M + P++I +++L C+ AG + E +
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL-MWNVMISGCAMLGDG 378
G++ + LVD+ ++ G + Y++ A ++ W ++ C G+
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 379 E----AALELF-VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
E AA EL VE E P + +G K G +E +RL KM
Sbjct: 368 ELAEIAARELLMVEPEN----PANYVLLG--KIYMSVGRQEEAERLRLKM 411
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 42/278 (15%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++ F + FV A++ MYG+ S+ AR+LFD++ ++AV W+ MI +Y G + EA++
Sbjct: 76 KSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVE 135
Query: 79 LLRDMRVA---------------------------------RVKPSEIAMISIIHVFAEL 105
L M V R KP+ I +++++ + +
Sbjct: 136 LYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 106 VDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTT 165
+L K +H Y RN + L + L++ Y +C ++ Y + VFD +V+W++
Sbjct: 196 GAFRLIKEIHSYAFRN--LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSS 253
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTV----EALEFGKLLHAFT 221
+I+ Y + ++ F +M V P++I L+++K C EAL + K +
Sbjct: 254 LISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG-- 311
Query: 222 LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
G+ S + +D+ + G F A V ++ K
Sbjct: 312 -DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/563 (26%), Positives = 265/563 (47%), Gaps = 39/563 (6%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
E GF R + N + +Y + GS+ A QLFD + DK+ ++W+ ++ +NG L+ ALD
Sbjct: 32 EAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALD 91
Query: 79 LLR-------------------------------DMRVARVKPSEIAMISIIHVFAELVD 107
L DM+ ++P+E + A LV
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT----FSILASLVT 147
Query: 108 -LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTM 166
++ G+ +HG + + + + + S++DMY + YA SVF +VSW +
Sbjct: 148 CVRHGEQIHGNAICS-GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
I + N + F MR + P+E T+ +V C + L GK A ++ G
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
+ ++ A IDM+ KC + +F +E D ++C++MI +Y+ C ++ +F+
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFIL 326
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
+RP++ T S+L A L+ G +HS + K G DT + TSL++MY K G
Sbjct: 327 AMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGS 385
Query: 347 IDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALK 405
+D +FA +D++ WN +I G A +L +F ++ Q + P+ +T +G L
Sbjct: 386 VDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILV 445
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN 465
AC ++G + EG ++F M G+ P EHY C+++LL R G+++EA+ + +P P++
Sbjct: 446 ACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSS 505
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAM 525
+ +L A + +L E A L E +++ IY +W + +R AM
Sbjct: 506 HIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAM 565
Query: 526 RDAGISKEPGVSSIEVNGSVHEF 548
+ + G S I + SV F
Sbjct: 566 NEHKLKSAQGSSKISIESSVFSF 588
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 29/394 (7%)
Query: 18 CENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEAL 77
C ++ V N+++ MY +G ++A +F M D+D VSW+ +I + +G + AL
Sbjct: 161 CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL-- 135
D MR ++P E + ++ + ++L +L GK C + G LS S+
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL------CIKMGF-LSNSIVL 273
Query: 136 ---IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
IDM+ KC L + +F V +MI Y + +RLF+ + V
Sbjct: 274 GAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVR 333
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P++ T S++ V L+ G +H+ ++ G + +AT+ ++MY K G A V
Sbjct: 334 PDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGV 392
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ--MNDCGIRPNEITMVSLLVLCAKAG 310
F + KDL+ + +I A+ + E IF Q MN ++P+ +T++ +LV C AG
Sbjct: 393 FAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ-SLKPDRVTLMGILVACCYAG 451
Query: 311 SLEMGKWIHSYIDK-QGIKRDTKLKTSLVDMYAKCGDIDTTYRL-----FAAATDRDILM 364
+ G I S ++K G+ + ++++ + G I+ + F ++ +
Sbjct: 452 FVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSH----I 507
Query: 365 WNVMISGCAMLGD---GEAALELFVEMEAQGVIP 395
W ++ LGD E + +E E + P
Sbjct: 508 WEPILCASLDLGDTRLAETVAKTMLESEPKSSFP 541
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 41/321 (12%)
Query: 192 IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
+P+ + LV ++ K++HA L G + + +Y K G +A
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 252 VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMND---------------CG----- 291
+FD I +K+ + + + + ++ D+F +M + CG
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 292 -----------IRPNEIT--MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR-DTKLKTSL 337
IRP E T +++ LV C + G+ IH G+ R + + S+
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSV 175
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
+DMY + G D +F DRD++ WN +I C+ G+ E AL+ F M + P++
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
T + CS L +GK+ + G + G +D+ S+ LD++ KL
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 458 DMPMRPNNVVLGSLLAACKLH 478
++ + ++V+ S++ + H
Sbjct: 295 ELE-KWDSVLCNSMIGSYSWH 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 7 ISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRN 66
+S + C + GF + V A I M+ + L+ + +LF ++ D+V ++MI +
Sbjct: 251 LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGS 310
Query: 67 YGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQ 126
Y + ++AL L V+P + S++ ++ L G +H V++
Sbjct: 311 YSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLD 369
Query: 127 SGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK- 185
+ V +TSL++MY K ++ A VF G ++ W T+I G + E + +F +
Sbjct: 370 TAV--ATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 186 MRREGVIPNEITILSLVKEC 205
+ + + P+ +T++ ++ C
Sbjct: 428 LMNQSLKPDRVTLMGILVAC 447
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 244/490 (49%), Gaps = 41/490 (8%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+ G ++ V N++I YG+ G+ A ++F D VSW+ +I ++ +AL
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302
Query: 79 LLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDM 138
L M P++ +S++ V + + L G+ +HG +++N C ++G+ L +LID
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GC-ETGIVLGNALIDF 360
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
Y KC NL +R FD +IV W +++GY + + + LF++M + G P E T
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQMLQMGFRPTEYTF 419
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGI-------------------------------- 226
+ +K C E + LH+ +R G
Sbjct: 420 STALKSCCVTELQQ----LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
SVV +Y + G + + + ++E D + + I+A ++++ +EV ++F
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 287 MNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK-RDTKLKTSLVDMYAKCG 345
M IRP++ T VS+L LC+K L +G IH I K DT + L+DMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
I + ++F +++++ W +IS + G G+ ALE F E + G P+ ++FI L
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN 465
AC H G+++EG LF KM D+G+ P+++HY C VDLL+R G L EA+ LI +MP +
Sbjct: 656 ACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADA 714
Query: 466 VVLGSLLAAC 475
V + L C
Sbjct: 715 PVWRTFLDGC 724
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 236/465 (50%), Gaps = 15/465 (3%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
+ V+VCN II +Y ++G + A ++FD+M +++ VS++T+I+ Y + G +D+A + +M
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
R P++ + ++ + +D++ G LHG ++ + + T L+ +Y +
Sbjct: 107 RYFGYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLK-YGLFMADAFVGTCLLCLYGRLD 163
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
L A VF+ S+ +W M++ H L E + F ++ R G E + L ++K
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMI 263
V+ L+ K LH + G+ + + + I YGKCG+ A +F + D++
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
+A+I A A++ + +FV M + G PN+ T VS+L + + L G+ IH +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K G + L +L+D YAKCG+++ + F D++I+ WN ++SG A DG L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLS 402
Query: 384 LFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
LF++M G P + TF ALK+C + L Q H ++ G ++
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSCCVTELQQ-----LHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 444 SRAGLLDEAQKLIIDMPMRPNNVVLGSLLAAC-----KLHKNVKL 483
++ L+++A L++D P +VV +++A + H++VKL
Sbjct: 458 AKNQLMNDAL-LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKL 501
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 216/498 (43%), Gaps = 65/498 (13%)
Query: 22 FHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
F D FV ++ +YG + LE A Q+F+ M K +W+ M+ G G L E + R
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALH-GYVMRNRNCGQSGVPLSTSLIDMYV 140
++ +E + + ++ + + DL + K LH + +C S V SLI Y
Sbjct: 205 ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV---NSLISAYG 261
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
KC N A +F IVSW +I + N + ++LFV M G PN+ T +S
Sbjct: 262 KCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS 321
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ V+ L G+ +H ++NG +VL A ID Y KCG+ +R FD I +K+
Sbjct: 322 VLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN 381
Query: 261 LMICSAMISAYAQTN---CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
++ +A++S YA + C+ +F+QM G RP E T + L C E+ +
Sbjct: 382 IVCWNALLSGYANKDGPICL----SLFLQMLQMGFRPTEYTFSTALKSCCVT---ELQQ- 433
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKC--------------------------------G 345
+HS I + G + + + +SL+ YAK G
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRG 493
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
+ +L + D + WN+ I+ C+ E +ELF M + P+ TF+ L
Sbjct: 494 QYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS 553
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGC--------MVDLLSRAGLLDEAQKLII 457
CS L G + GL+ K + + C ++D+ + G + K+
Sbjct: 554 LCSKLCDLTLGSSI-------HGLITKTD-FSCADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Query: 458 DMPMRPNNVVLGSLLAAC 475
+ R N++ + L +C
Sbjct: 606 E--TREKNLITWTALISC 621
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 299 MVSLLVLCAKAGSLEMGKWIH--SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA 356
+VSLL +C KA S K +H S + + + +++ +Y K G++ ++F
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 357 ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEG 416
+R+ + +N +I G + GD + A +F EM G +PN T G L S ++ G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAG 132
Query: 417 KRLFHKMVHDFGLVPKVEHYG-CMVDLLSRAGLLDEAQKLIIDMPMR 462
+L H + +GL G C++ L R LL+ A+++ DMP +
Sbjct: 133 TQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 234/464 (50%), Gaps = 38/464 (8%)
Query: 148 ARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGT 207
A VFD ++S T +I ++ + E + F ++ G+ PNE T +++ T
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 208 VEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAM 267
++ GK LH + L+ G+ +V + +A ++ Y K AR FD + +++ + +
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 268 ISAY-------------------------------AQTNCIDEVFDIFVQMNDCGIR-PN 295
IS Y +QT +E + FV M G+ PN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHS-YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
E T + + S GK IH+ I G + + + SL+ Y+KCG+++ + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 355 AAATD--RDILMWNVMISGCAMLGDGEAALELFVEM-EAQGVIPNDITFIGALKACSHSG 411
+ R+I+ WN MI G A G GE A+ +F +M + + PN++T +G L AC+H+G
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 412 LLQEGKRLFHKMVHDF--GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
L+QEG F+K V+D+ + ++EHY CMVD+LSR+G EA++LI MP+ P
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWK 405
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
+LL C++H N +L + AA + L L+ V++SN Y+A W +VS IRR M++ G
Sbjct: 406 ALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETG 465
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLD 573
+ + G S IEV + F+ D+ + +Y ++A + + L+
Sbjct: 466 LKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 42/370 (11%)
Query: 45 ARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAE 104
A ++FD++ + D +S + +I + + EA + + ++P+E ++I
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 105 LVDLKLGKALHGYVMR-------------------------NRNC----GQSGVPLSTSL 135
D+KLGK LH Y ++ R C V T+L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG-VIPN 194
I Y+K A S+F S+V+W +I G+ T E + FV M REG VIPN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRN-GITISVVLATAFIDMYGKCGDFRSARYVF 253
E T + + + GK +HA ++ G +V + + I Y KCG+ + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 254 DSIENKDLMICS--AMISAYAQTNCIDEVFDIFVQM-NDCGIRPNEITMVSLLVLCAKAG 310
+ +E + I S +MI YA +E +F +M D +RPN +T++ +L C AG
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 311 SLEMG-----KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA-ATDRDILM 364
++ G K ++ Y D + + + +VDM ++ G L + D I
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLL--ELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 365 WNVMISGCAM 374
W ++ GC +
Sbjct: 404 WKALLGGCQI 413
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 78/336 (23%)
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
R+A VFD I D++ +A+I + + + E F ++ GIRPNE T +++
Sbjct: 44 RNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSS 103
Query: 307 AKAGSLEMGKWIHSYIDKQGI-----------------------------KRDTKLK--T 335
+ +++GK +H Y K G+ RD + T
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 336 SLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQG-VI 394
+L+ Y K + + LF A +R ++ WN +I G + G E A+ FV+M +G VI
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA-- 452
PN+ TF A+ A S+ GK + + G V + ++ S+ G ++++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 453 -----------------------------------QKLIIDMPMRPNNVVLGSLLAACK- 476
+K++ D +RPNNV + +L AC
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 477 --------LHKNVKLGEWAAGQFLSLESHKCGYNVL 504
++ N + ++ L LE + C ++L
Sbjct: 344 AGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDML 379
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 12/252 (4%)
Query: 14 ARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
AR C ++ +V +I Y + E A LF M ++ V+W+ +I + + G
Sbjct: 147 ARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRN 206
Query: 74 DEALDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
+EA++ DM R V P+E I + + GK++H ++ + V +
Sbjct: 207 EEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG-KRFNVFVW 265
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGA--SIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE- 189
SLI Y KC N+ + F+ +IVSW +MI GY H E + +F KM ++
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 190 GVIPNEITILSLVKECGTVEALE-----FGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
+ PN +TIL ++ C ++ F K ++ + N + + +DM + G
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSG 383
Query: 245 DFRSARYVFDSI 256
F+ A + S+
Sbjct: 384 RFKEAEELIKSM 395
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 269/520 (51%), Gaps = 16/520 (3%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF ++FV +A++ +Y + ++ A +LFD+M+D++ + ++R + + G ++
Sbjct: 142 GFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVY 201
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M + V + + +I + + GK LH V+++ S + ++ L+D Y
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS-GWNISNIFVANVLVDYYS 260
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
C +L+ + F+ ++SW ++++ ++ + + LF KM+ G P+ +S
Sbjct: 261 ACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMS 320
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVV-LATAFIDMYGKCGDFRSARYVFDSIENK 259
+ C ++ GK +H + L+ G +S + + +A IDMYGKC ++ ++ S+
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCL 380
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+L C++++++ ++ ++F M D G +E+T+ ++L KA SL + + +H
Sbjct: 381 NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL----KALSLSLPESLH 436
Query: 320 SYI------DKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCA 373
S K G D + SL+D Y K G + + ++F +I +I+G A
Sbjct: 437 SCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYA 496
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
G G +++ EM+ +IP+++T + L CSHSGL++EG+ +F + +G+ P
Sbjct: 497 RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
+ Y CMVDLL RAGL+++A++L++ + V SLL +C++H+N +G AA ++
Sbjct: 557 KLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMN 616
Query: 494 LESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKE 533
LE + +S Y + GD +I R +R+ S+E
Sbjct: 617 LEPENFAVYIQVSKFYF---EIGDF-EISRQIREIAASRE 652
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 206/439 (46%), Gaps = 12/439 (2%)
Query: 40 GSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISII 99
G+L A + FD+M +D V+++ +I R G A++L +M ++ S S++
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 100 HVFAELVDLKLGKALHGYVMR-NRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA 158
V ++ + + G +H V+ C + + ++L+ +Y + + A +FD
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGC---NMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
++ ++ + T ++++M EGV N +T +++ C + GK LH
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 219 AFTLRNGITIS-VVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCI 277
+ +++G IS + +A +D Y CGD + F+++ KD++ ++++S A +
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 278 DEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT-KLKTS 336
+ D+F +M G RP+ +S L C++ ++ GK IH Y+ K G + ++++
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSA 356
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
L+DMY KC I+ + L+ + ++ N +++ G + +E+F M +G +
Sbjct: 357 LIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGID 416
Query: 397 DITFIGALKACSHSGLLQEGKR---LFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
++T LKA S S L E L H G V ++D +++G +E
Sbjct: 417 EVTLSTVLKALSLS--LPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSG-QNEVS 473
Query: 454 KLIIDMPMRPNNVVLGSLL 472
+ + D PN L S++
Sbjct: 474 RKVFDELDTPNIFCLTSII 492
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 166/351 (47%), Gaps = 7/351 (1%)
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
ID +K NL A FD S +V++ +I+G I L+ +M G+ +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T S++ C G +H + G ++ + +A + +Y A +FD
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ +++L +C+ ++ + QT +F+++++M G+ N +T ++ C+ + G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 316 KWIHSYIDKQGIK-RDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
K +HS + K G + + LVD Y+ CGD+ + R F A ++D++ WN ++S CA
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL-VPKV 433
G +L+LF +M+ G P+ F+ L CS + +Q GK++ H V G V +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI-HCYVLKMGFDVSSL 351
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNV 481
++D+ + ++ + L +P + N ++ SL+ C + K++
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLM-HCGITKDI 401
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 17 CC--ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
CC ++G+ DV V ++I Y + G E +R++FD++ + +++I Y RNG+
Sbjct: 443 CCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGT 502
Query: 75 EALDLLRDMRVARVKPSEIAMISII 99
+ + +LR+M + P E+ ++S++
Sbjct: 503 DCVKMLREMDRMNLIPDEVTILSVL 527
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 17/346 (4%)
Query: 211 LEFGKLLHAFTLRNGITI-SVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMIS 269
L G+++H + G S ++ T + Y K GD R AR VFD + + + +AMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 270 AYAQ-----TNCIDEVFDIFVQMNDCG--IRPNEITMVSLLVLCAKAGSLEMGKWIHSYI 322
Y + + +F + + CG +RP + TMV +L ++ G LE+G +H YI
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 323 DKQGIKR--DTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEA 380
+K G D + T+LVDMY+KCG ++ + +F +++ W M +G A+ G G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
L M G+ PN+ITF L A H GL++EG LF M FG+ P +EHYGC+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 441 DLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH--- 497
DLL +AG + EA + I+ MP++P+ ++L SL AC ++ +GE L +E
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 498 ----KCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSI 539
+C V +SN+ A + KW +V +R+ M++ I PG S +
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 108 LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMI 167
L++G+ +HG V + +S + + T+L+ Y K +L YAR VFD + V+W MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 168 AGYI-HTNNLNEGIR-LFVKMRR-----EGVIPNEITILSLVKECGTVEALEFGKLLHAF 220
GY H + N R V RR GV P + T++ ++ LE G L+H +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 221 TLRNGIT--ISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCID 278
+ G T + V + TA +DMY KCG +A VF+ ++ K++ ++M + A +
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG-KWIHSYIDKQGIKRDTKLKTSL 337
E ++ +M + GI+PNEIT SLL G +E G + S + G+ + +
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 338 VDMYAKCGDIDTTYR-LFAAATDRDILMWNVMISGCAMLGD---GEAALELFVEMEAQ 391
VD+ K G I Y+ + A D ++ + + C++ G+ GE + +E+E +
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 8/231 (3%)
Query: 27 FVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGR-----NGLLDEALDLLR 81
+ ++ Y + G L +AR++FD+M ++ +V+W+ MI Y N +A+ L R
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 82 DMRV--ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
+ V+P++ M+ ++ ++ L++G +HGY+ + + V + T+L+DMY
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
KC L A SVF+ ++ +WT+M G NE L +M G+ PNEIT
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 200 SLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
SL+ + +E G +L + R G+T + +D+ GK G + A
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
DVF+ A++ MY + G L A +F+ M K+ +W++M NG +E +LL M
Sbjct: 256 DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA 315
Query: 85 VARVKPSEIAMISIIHVF 102
+ +KP+EI S++ +
Sbjct: 316 ESGIKPNEITFTSLLSAY 333
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 192/395 (48%), Gaps = 33/395 (8%)
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
C ++ +++ D G P+ V L CA SLE K +H + + + D KL
Sbjct: 216 CQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 336 SLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
++ M+ +C I R+F D+D+ W++M+ + G G+ AL LF EM G+ P
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 396 NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL 455
N+ TF+ AC+ G ++E F M ++ G+ PK EHY ++ +L + G L EA++
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 456 IIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKW 515
I D+P P ++ +LH ++ L ++ + ++ K A NK
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK-----------AVINK- 443
Query: 516 GDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNV 575
I P S E N + E R + E +E
Sbjct: 444 --------------IPTPPPKSFKETN-----MVTSKSRILEFRNLTFYKDEAKEMAAKK 484
Query: 576 G--YTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHN 633
G Y PD VL +ID E KE AL YHSE+LA+AYG+I P + I+KNLRVC D HN
Sbjct: 485 GVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHN 544
Query: 634 ATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
++S+I GR +IVRD RFHHFK+G CSC DYW
Sbjct: 545 FIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 184 VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC 243
+++ +G +P+ + L + C +++LE K +H L++ L I M+G+C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 244 GDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL 303
A+ VFD + +KD+ M+ AY+ D+ +F +M G++PNE T +++
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 304 VLCAKAGSLEMGKWIH--SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL-----FAA 356
+ CA G +E ++H S ++ GI T+ ++ + KCG + + F
Sbjct: 345 LACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEP 403
Query: 357 ATDRDILMWNVMISGCAMLGD---GEAALELFVEMEAQGVIPNDIT 399
D W M + + GD + EL V+++ + N I
Sbjct: 404 TAD----FWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIP 445
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 90 PSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYAR 149
P + + A L L+ K +H + ++++ G L+ +I M+ +C ++ A+
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK--LNNMVISMFGECSSITDAK 291
Query: 150 SVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE 209
VFD + SW M+ Y ++ + LF +M + G+ PNE T L++ C TV
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 210 ALEFGKLLHAFTLRN--GITISVVLATAFIDMYGKCGDFRSA-RYVFD 254
+E LH +++N GI+ + + GKCG A +Y+ D
Sbjct: 352 GIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
++ F D + N +I M+GE S+ A+++FD MVDKD SW M+ Y NG+ D+AL
Sbjct: 264 QSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALH 323
Query: 79 LLRDMRVARVKPSEIAMISII 99
L +M +KP+E +++
Sbjct: 324 LFEEMTKHGLKPNEETFLTVF 344
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 190/370 (51%), Gaps = 11/370 (2%)
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT 358
++ L +C +A L+ K +H I D L++MY+ CG + +F +
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 359 DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKR 418
++++ W ++I A G GE A+++F + +G IP+ F G AC G + EG
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 419 LFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
F M D+G+ P +E Y +V++ + G LDEA + + MPM PN V +L+ ++H
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 479 KNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSS 538
N++LG++ A L+ + +++ G + + + K G+
Sbjct: 437 GNLELGDYCAEVVEFLDPTRLN----------KQSREGFIPVKASDVEKESLKKRSGILH 486
Query: 539 IEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALN 598
V S+ EF GD PE +++++ ++ + VGY + L +ID E KET L
Sbjct: 487 -GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLL 545
Query: 599 YHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFK 658
HSE++A A +++ AP P ++KNLRVC D HNA ++S I GRE+I RD RFH K
Sbjct: 546 GHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMK 605
Query: 659 EGSCSCHDYW 668
G+C+C DYW
Sbjct: 606 NGACTCKDYW 615
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 13/230 (5%)
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+L L K CG E L+ K +H + + + ++MY CG A VF+ +
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
K+L +I +A+ ++ D+F + + G P+ + C G ++ G
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 318 -IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA-AATDRDILMWNVMIS----- 370
S GI + SLV+MYA G +D + ++ +W +++
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 371 GCAMLGDGEAALELFVE------MEAQGVIPNDITFIGALKACSHSGLLQ 414
G LGD A + F++ +G IP + + SG+L
Sbjct: 437 GNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILH 486
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 185/322 (57%), Gaps = 10/322 (3%)
Query: 223 RNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFD 282
RN +T +V++ T ++ GDF A + + N+ ++ + +I YA+ + E
Sbjct: 187 RNPVTWNVMI-TGLTNL----GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAIL 241
Query: 283 IFVQMNDC-GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG-IKRDTKLKTSLVDM 340
+F +M C I+PNEIT++++L G L+M +H+Y+ K+G + D ++ SL+D
Sbjct: 242 LFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 301
Query: 341 YAKCGDIDTTYRLFAAATD--RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
YAKCG I + ++ F + ++++ W MIS A+ G G+ A+ +F +ME G+ PN +
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRV 361
Query: 399 TFIGALKACSHSGLLQEG-KRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
T I L ACSH GL +E F+ MV+++ + P V+HYGC+VD+L R G L+EA+K+ +
Sbjct: 362 TMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIAL 421
Query: 458 DMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGD 517
++P+ VV LL AC ++ + +L E + + LE G VLMSNI+ ++ D
Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLD 481
Query: 518 VSDIRRAMRDAGISKEPGVSSI 539
R+ M G++K PG S +
Sbjct: 482 AQRFRKQMDVRGVAKLPGHSQV 503
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIA----------------- 168
+S V + T+L+ MY+ N+ A VFD + V+W MI
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 169 --------------GYIHTNNLNEGIRLFVKMRR-EGVIPNEITILSLVKECGTVEALEF 213
GY + E I LF +M + + PNEITIL+++ + L+
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 214 GKLLHAFTLRNG-ITISVVLATAFIDMYGKCGDFRSARYVFDSIEN--KDLMICSAMISA 270
+HA+ + G + + + + ID Y KCG +SA F I N K+L+ + MISA
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 271 YAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG--SLEMGKWIHSYIDKQGIK 328
+A E +F M G++PN +TM+S+L C+ G E ++ ++ +++ I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRL-FAAATDRDILMWNVMISGCAMLGDGEAA 381
D K LVDM + G ++ ++ + ++W +++ C++ D E A
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 6/234 (2%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
R+ N +I +G E A +KM ++ VSW+T+I Y R EA+ L M
Sbjct: 187 RNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 84 RVA-RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
+KP+EI +++I+ L DLK+ ++H YV + R + ++ SLID Y KC
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK-RGFVPCDIRVTNSLIDAYAKC 305
Query: 143 KNLAYARSVFDGFSGA--SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
+ A F ++VSWTTMI+ + E + +F M R G+ PN +T++S
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMIS 365
Query: 201 LVKEC--GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
++ C G + EF + + IT V +DM + G A +
Sbjct: 366 VLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALE 383
K G + ++T+LV MY G++ +++F +R+ + WNVMI+G LGD E AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 384 LFVEMEAQGVI--------------------------------PNDITFIGALKACSHSG 411
+M + V+ PN+IT + L A + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 412 LLQEGKRLFHKMVHDFGLVP-KVEHYGCMVDLLSRAGLLDEAQKLIIDMPM-RPNNVVLG 469
L+ + H V G VP + ++D ++ G + A K I++P R N V
Sbjct: 271 DLKMCGSV-HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 470 SLLAACKLHKNVKLGEWAAGQFLSLE 495
++++A +H +G+ A F +E
Sbjct: 330 TMISAFAIH---GMGKEAVSMFKDME 352
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 251/529 (47%), Gaps = 44/529 (8%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+ ++GF + + N+++ Y SLE A ++FD+M D D +SW++++ Y ++G E
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+ L ++ + V P+E + + + A L LG +H +++ + V + L
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKGNVVVGNCL 198
Query: 136 IDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
IDMY KC + A VF VSW ++A L G+ F +M PN
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM------PNP 252
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T V ID + K GDF +A V
Sbjct: 253 DT---------------------------------VTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ N + + +++ Y + E + F +M+ G+R +E ++ +L A + G
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAML 375
IH+ K G+ + ++L+DMY+KCG + +F +++++WN MISG A
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 376 GDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLLQEGKR-LFHKMVHDFGLVPKV 433
GD A++LF +++ + + P+ TF+ L CSH + E F M++++ + P V
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLS 493
EH ++ + + G + +A+++I + + V +LL AC K++K + A + +
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 494 L-ESHKCGY-NVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIE 540
L ++ K Y ++MSN+YA +W +V IR+ MR++G+ KE G S I+
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 188/420 (44%), Gaps = 51/420 (12%)
Query: 59 SWSTMIR---NYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH 115
SWST++ +G G+L A++L+ D KP ++ ++ V + L + LH
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGE----KPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 116 GYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNN 175
GYV ++ S LS SL+ Y +L A VFD ++SW ++++GY+ +
Sbjct: 79 GYVTKHGFV--SNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITI-SVVLAT 234
EGI LF+++ R V PNE + + + C + G +H+ ++ G+ +VV+
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
IDMYGKCG A VF +E KD + +A++++
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS------------------------ 232
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
C++ G LE+G W Q DT L+D + K GD + +++
Sbjct: 233 -----------CSRNGKLELGLWFF----HQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQ 414
+ + + WN +++G A E F +M + GV ++ + L A + ++
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 415 EGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAA 474
G L H H GL +V ++D+ S+ G+L A+ + MP R N +V +++
Sbjct: 338 WGS-LIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMISG 395
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 142/320 (44%), Gaps = 43/320 (13%)
Query: 156 SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
S AS SW+T++ ++ +R V++ +G P+ ++ L++ G + +
Sbjct: 17 STASSNSWSTIVPALARFGSIGV-LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCR 75
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTN 275
LH + ++G + L+ + + Y A VFD + + D++ ++++S Y Q+
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR-DTKLK 334
E +F++++ + PNE + + L CA+ +G IHS + K G+++ + +
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
L+DMY KCG +D +F ++D + WN +++ C
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC---------------------- 233
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQK 454
S +G L+ G FH+M + P Y ++D ++G + A +
Sbjct: 234 -------------SRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKSGDFNNAFQ 275
Query: 455 LIIDMPMRPNNVVLGSLLAA 474
++ DMP PN+ ++L
Sbjct: 276 VLSDMP-NPNSSSWNTILTG 294
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 4/223 (1%)
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
S ++ A A+ I V V++ + G +P+ +V LL + G + + + +H Y+ K
Sbjct: 25 STIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTK 83
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G +T+L SL+ Y ++ +++F D D++ WN ++SG G + + L
Sbjct: 84 HGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICL 143
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP-KVEHYGCMVDLL 443
F+E+ V PN+ +F AL AC+ L G + K+V GL V C++D+
Sbjct: 144 FLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV-KLGLEKGNVVVGNCLIDMY 202
Query: 444 SRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEW 486
+ G +D+A L+ + V +++A+C + ++LG W
Sbjct: 203 GKCGFMDDAV-LVFQHMEEKDTVSWNAIVASCSRNGKLELGLW 244
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 206/456 (45%), Gaps = 80/456 (17%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLL 80
GF +D +V N I+ MY + S+E AR++FD++ + W+ MI Y + G +EA L
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M ++ V T +I +
Sbjct: 191 DMM-----------------------------------------PENDVVSWTVMITGFA 209
Query: 141 KCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILS 200
K K+L AR FD S+VSW M++GY + +RLF M R GV PNE T +
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC----------------- 243
++ C + L + ++ + TA +DM+ KC
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 244 ---------------GDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMN 288
GD SAR +FD++ ++++ +++I+ YA + F M
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 289 DCG-IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
D G +P+E+TM+S+L C LE+G I YI K IK + SL+ MYA+ G++
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 348 DTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKAC 407
R+F +RD++ +N + + A GDG L L +M+ +G+ P+ +T+ L AC
Sbjct: 450 WEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
Query: 408 SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLL 443
+ +GLL+EG+R+F + + P +HY CM DLL
Sbjct: 510 NRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 191/465 (41%), Gaps = 106/465 (22%)
Query: 44 FARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIH--- 100
+ R +FD + + ++M + + + + ++ L L + P + +I
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 101 ----VFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
+F LV+ KLG YV RN ++DMYVK +++ AR VFD S
Sbjct: 118 RFGILFQALVE-KLGFFKDPYV---RNV----------IMDMYVKHESVESARKVFDQIS 163
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKL 216
W MI+GY N E +LF ++P
Sbjct: 164 QRKGSDWNVMISGYWKWGNKEEACKLF------DMMPEN--------------------- 196
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
VV T I + K D +AR FD + K ++ +AM+S YAQ
Sbjct: 197 ------------DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
++ +F M G+RPNE T V ++ C+ + + + ID++ ++ + +KT+
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 337 LVDMYAKCGDIDTTYRLFAA-ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI- 394
L+DM+AKC DI + R+F T R+++ WN MISG +GD +A +LF M + V+
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 395 -------------------------------PNDITFIGALKACSHSGLLQEGK------ 417
P+++T I L AC H L+ G
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 418 RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
R ++D G Y ++ + +R G L EA+++ +M R
Sbjct: 425 RKNQIKLNDSG-------YRSLIFMYARGGNLWEAKRVFDEMKER 462
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLD 74
R E G R++ NA+I Y +G + ARQLFD M ++ VSW+++I Y NG
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 75 EALDLLRDM-RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR-NCGQSGVPLS 132
A++ DM KP E+ MIS++ + DL+LG + Y+ +N+ SG
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY--- 436
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
SLI MY + NL A+ VFD +VS+ T+ + + E + L KM+ EG+
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
P+ +T S++ C L+ G+ + ++RN +
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFK-SIRNPL 529
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 141/362 (38%), Gaps = 84/362 (23%)
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECG 206
Y R +FD + ++ +M + + N+ +RL+ + R G++P+ + ++K G
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 207 TVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSA 266
FG L A + G + +DMY K SAR VFD I + +
Sbjct: 118 -----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
MIS Y + +E +F M + N++ W
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPE-----NDVV-----------------SW--------- 201
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFV 386
T ++ +AK D++ + F ++ ++ WN M+SG A G E AL LF
Sbjct: 202 --------TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 387 EMEAQGVIPNDITFIGALKACS--------------------------HSGLL------- 413
+M GV PN+ T++ + ACS + LL
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 414 --QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSL 471
Q +R+F+++ LV + M+ +R G + A++L MP R N V SL
Sbjct: 314 DIQSARRIFNELGTQRNLVT----WNAMISGYTRIGDMSSARQLFDTMPKR-NVVSWNSL 368
Query: 472 LA 473
+A
Sbjct: 369 IA 370
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 17/238 (7%)
Query: 249 ARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
R +FDS+ ++ + ++M +++ + ++V ++ Q + CGI P+ S V+
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAF---SFPVVIKS 115
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVM 368
AG G + ++K G +D ++ ++DMY K +++ ++F + R WNVM
Sbjct: 116 AG--RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFG 428
ISG G+ E A +LF M V+ + G K L+ ++ F +M
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKD----LENARKYFDRMPEK-- 227
Query: 429 LVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLGSLLAACKLHKNVKL 483
V + M+ ++ G ++A +L DM +RPN +++AC + L
Sbjct: 228 ---SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 205/423 (48%), Gaps = 34/423 (8%)
Query: 166 MIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNG 225
+ Y+ +++ + + + + R G +P+ T +SL+ ++ GK+ H +++G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 226 ITISVVLATAFIDMYGKCG-------------------------------DFRSARYVFD 254
+ + + + MY CG D +A +FD
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 255 SIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
+ +K+++ + MISAY N +F +M G + NE T+V LL C ++ L+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAM 374
G+ +H+ + + + + T+L+DMY KC ++ R+F + + R+ + WNVMI +
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
G E LELF M + P+++TF+G L C+ +GL+ +G+ + MV +F + P
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
H CM +L S AG +EA++ + ++P + P + +LL++ + N LGE A
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSL 448
Query: 492 LSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMG 551
+ + Y L+ NIY+ +W DV+ +R +++ I + PG +++ VH +G
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Query: 552 DRE 554
+E
Sbjct: 509 CKE 511
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 41/355 (11%)
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+AL D+ P +S+I + + GK HG +++ C Q +P+ S
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKH-GCDQV-LPVQNS 158
Query: 135 LIDMYVKCKNLAYARSVF-------------------------------DGFSGASIVSW 163
L+ MY C L A+ +F D +I+SW
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 164 TTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLR 223
MI+ Y+ NN I LF +M R G NE T++ L+ CG L+ G+ +HA +R
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 224 NGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDI 283
+ SVV+ TA IDMYGKC + AR +FDS+ ++ + + MI A+ + ++
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLEL 338
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY-IDKQGIKRDTKLKTSLVDMYA 342
F M + +RP+E+T V +L CA+AG + G+ +S +D+ IK + + + ++Y+
Sbjct: 339 FEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 343 KCGDIDTTYRLFAAATDRDI----LMWNVMISGCAMLGD---GEAALELFVEMEA 390
G + D D+ W ++S G+ GE+ + +E +
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 24 RDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDM 83
RD+ N+II G + A +LFD+M DK+ +SW+ MI Y ++ L R+M
Sbjct: 182 RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 241
Query: 84 RVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
A + +E ++ +++ LK G+++H ++R S V + T+LIDMY KCK
Sbjct: 242 VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL--NSSVVIDTALIDMYGKCK 299
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK 203
+ AR +FD S + V+W MI + G+ LF M + P+E+T + ++
Sbjct: 300 EVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVL- 358
Query: 204 ECGTVEA 210
CG A
Sbjct: 359 -CGCARA 364
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 35/293 (11%)
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNC 276
+HA + +G A + + GD ++ SI L + + AY ++
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSSS 98
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
+ + + G P+ T VSL+ K ++ GK H K G + ++ S
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP- 395
L+ MY CG +D +LF RDI+ WN +I+G GD AA +LF EM + +I
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 396 ------------------------------NDITFIGALKACSHSGLLQEGKRLFHKMVH 425
N+ T + L AC S L+EG+ + ++
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 426 DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLH 478
F L V ++D+ + + A+++ + +R N V ++ A LH
Sbjct: 279 TF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLH 329
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 171/351 (48%), Gaps = 33/351 (9%)
Query: 147 YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR-REGVIPNEITILSLVKEC 205
YA VF+ S +W MI + E + LF+ M ++ T ++K C
Sbjct: 70 YASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKAC 129
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK------ 259
++ G +H ++ G V +D+Y KCG S R VFD + +
Sbjct: 130 LASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWT 189
Query: 260 -------------------------DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+++ +AMI+AY + DE F +F +M ++P
Sbjct: 190 TMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF 354
NE T+V+LL + GSL MG+W+H Y K G D L T+L+DMY+KCG + ++F
Sbjct: 250 NEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF 309
Query: 355 AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVI-PNDITFIGALKACSHSGLL 413
+ + WN MI+ + G GE AL LF EME + + P+ ITF+G L AC+++G +
Sbjct: 310 DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPN 464
++G R F +M+ +G+ P EH CM+ LL +A +++A L+ M P+
Sbjct: 370 KDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 35/324 (10%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMR 84
D + +I + G ++A +F+++ +W+ MIR+ N EAL L M
Sbjct: 51 DQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 110
Query: 85 VA-RVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCK 143
++ + + + +I ++LG +HG ++ + V +L+D+Y KC
Sbjct: 111 ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFF--NDVFFQNTLMDLYFKCG 168
Query: 144 NLAYARSVFDGFSGASIVSWTTMIAG-------------------------------YIH 172
R VFD G SIVSWTTM+ G Y+
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Query: 173 TNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVL 232
+E +LF +M+ + V PNE TI++L++ + +L G+ +H + +NG + L
Sbjct: 229 NRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFL 288
Query: 233 ATAFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIF-VQMNDCG 291
TA IDMY KCG + AR VFD ++ K L ++MI++ C +E +F +
Sbjct: 289 GTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEAS 348
Query: 292 IRPNEITMVSLLVLCAKAGSLEMG 315
+ P+ IT V +L CA G+++ G
Sbjct: 349 VEPDAITFVGVLSACANTGNVKDG 372
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 36/288 (12%)
Query: 201 LVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKD 260
++ C L K +H +++ +T +L I + G+ + A VF+ +++
Sbjct: 26 FLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 261 LMICSAMISAYAQTNCIDEVFDIFV-QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
+ MI + + + E +F+ M + ++ T ++ C + S+ +G +H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGC---AMLG 376
K G D + +L+D+Y KCG D+ ++F R I+ W M+ G + L
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 377 DGE----------------------------AALELFVEMEAQGVIPNDITFIGALKACS 408
E A +LF M+ V PN+ T + L+A +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 409 HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
G L G R H H G V ++D+ S+ G L +A+K+
Sbjct: 263 QLGSLSMG-RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF 309
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALD 78
+NGF D F+ A+I MY + GSL+ AR++FD M K +W++MI + G +G +EAL
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 79 LL-RDMRVARVKPSEIAMISIIHVFAELVDLKLG 111
L A V+P I + ++ A ++K G
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 182/368 (49%), Gaps = 24/368 (6%)
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
LC A +L+ K +H +I D S+++MY+ CG ++ +F + +R++
Sbjct: 190 LCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMV 424
W +I A G GE A++ F + +G P+ F AC G + EG F M
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 425 HDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLG 484
++G++P +EHY +V +L+ G LDEA + + M PN + +L+ ++H ++ LG
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV--ESMEPNVDLWETLMNLSRVHGDLILG 367
Query: 485 EWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV----SDIRRAMRDAGISKEPGVSSIE 540
+ L++ + E+K G V SD+ + + ++K P
Sbjct: 368 DRCQDMVEQLDASRLN----------KESKAGLVPVKSSDLVKE-KLQRMAKGP------ 410
Query: 541 VNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDGEEKETALNYH 600
N + GD PE R +Y + ++E + +GY P L ++D E K+ L H
Sbjct: 411 -NYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNH 469
Query: 601 SEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRNRFHHFKEG 660
+E+ A + + IR++KNLRVC D HNA L+S+I GRE+I RD RFHH K+G
Sbjct: 470 NERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDG 529
Query: 661 SCSCHDYW 668
CSC +YW
Sbjct: 530 VCSCREYW 537
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA-T 234
+ + + + R EG + + + + + CG +AL+ K++H F + + + IS + A
Sbjct: 162 VKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEF-ITSSVGISDISAYN 220
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+ I+MY CG A VF+S+ ++L +I +A+ ++ D F + G +P
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 295 NEITMVSLLVLCAKAGSLEMGKW-IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
+ + C G + G S + GI + SLV M A+ G +D R
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR- 339
Query: 354 FAAATDRDILMWNVMISGCAMLGD 377
F + + ++ +W +++ + GD
Sbjct: 340 FVESMEPNVDLWETLMNLSRVHGD 363
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 22/393 (5%)
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
E ++ + + G + I ++ L LC K +LE + +H I D + +++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 339 DMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
+MY+ C +D ++F + + VM+ G GE A++LF + +G PN
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
F C+ +G ++EG F M ++G+VP +EHY + +L+ +G LDEA +
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 459 MPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDV 518
MPM P+ V +L+ ++H +V+LG+ A L++ + + + +A
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATR------LDKVSSAGLVATKA 335
Query: 519 SDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYT 578
SD + KEP S S F D HP+ IYE + +R +L +GY
Sbjct: 336 SDF--------VKKEPSTRSEPYFYST--FRPVDSSHPQMNIIYETLMSLRSQLKEMGYV 385
Query: 579 PDIS---AVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNAT 635
PD +++M + E KE Y E++A+ L+ P + I ++ N+R+ D H+
Sbjct: 386 PDTRYYRSLIMAM--ENKEQIFGYR-EEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMM 442
Query: 636 MLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
L+S I GR++I RD +H FK G C C++ W
Sbjct: 443 KLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 5/221 (2%)
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
N E + + + +G + I +L L K CG EALE +++H + V
Sbjct: 99 NWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARN 158
Query: 235 AFIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
A I+MY C A VF+ + + M+ + +E D+F + + G +P
Sbjct: 159 AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP 218
Query: 295 NEITMVSLLVLCAKAGSLEMGK-WIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
N + C G ++ G + + GI + S+ M A G +D
Sbjct: 219 NGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNF 278
Query: 354 FA-AATDRDILMWNVMISGCAMLGD---GEAALELFVEMEA 390
+ + +W +++ + GD G+ EL +++A
Sbjct: 279 VERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA 319
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 23/396 (5%)
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTS 336
I E ++ + D G + ++ L LC + +LE + +H I D + +
Sbjct: 93 IREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI----TPLDARSYHT 148
Query: 337 LVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPN 396
+++MY+ C D +F R+ W MI A G+GE A+++F +G P+
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 397 DITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI 456
F AC G + EG F M D+G+V +E Y ++++L+ G LDEA +
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 457 IDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGY--NVLMSNIYAAENK 514
M + P+ + +L+ C + ++LG+ A L++ + N + A+++
Sbjct: 269 ERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSA 328
Query: 515 WGDVSDIR--RAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKL 572
+ ++R + +RD + +HEF GD H T + ++ ++
Sbjct: 329 MEKLKELRYCQMIRD------------DPKKRMHEFRAGDTSHLGTVSAFR---SLKVQM 373
Query: 573 DNVGYTPDISAVLMNIDGEEKETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYH 632
++G+ P + ++ EEKE L + S KLA A+ +I+ P+ +++N+R C D H
Sbjct: 374 LDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGH 433
Query: 633 NATMLLSRIYGREIIVRDRNRFHHFKEGSCSCHDYW 668
N ++S I GR +I RD+ ++H +K G CSC DYW
Sbjct: 434 NTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 125/296 (42%), Gaps = 20/296 (6%)
Query: 139 YVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITI 198
+V+C+ ++ + + +I ++ + + E + + + +G I + +
Sbjct: 60 FVQCRRVSSYAQMVNNHQSVTIETFDALCKQV----KIREALEVIDILEDKGYIVDFPRL 115
Query: 199 LSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAF---IDMYGKCGDFRSARYVFDS 255
L L K CG VEALE +++H I+ + A ++ I+MY C A VF+
Sbjct: 116 LGLAKLCGEVEALEEARVVHD-------CITPLDARSYHTVIEMYSGCRSTDDALNVFNE 168
Query: 256 IENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
+ ++ MI A+ + D+F + + G +P++ ++ C G + G
Sbjct: 169 MPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG 228
Query: 316 KW-IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT-DRDILMWNVMISGCA 373
S G+ + ++++M A CG +D T + + MW +++ C
Sbjct: 229 LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCW 288
Query: 374 MLGD---GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
+ G G+ EL +++A + + A KA S S + + + + +M+ D
Sbjct: 289 VQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKA-SDSAMEKLKELRYCQMIRD 343
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Query: 534 PGVSSIEVNGSVHEFIMGDREHPETR-RIYEIVAEMREKLDNVGYTPDISAVLMNIDGEE 592
P S +V G E G+++ R + Y + + +++ + GY P+ VL +ID E
Sbjct: 104 PSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEA 163
Query: 593 KETALNYHSEKLAMAYGLISVAPGAPIRIVKNLRVCDDYHNATMLLSRIYGREIIVRDRN 652
KE AL +HSE+LA+A+G+I+ PG IR++KNLR+C D HN +LS I REIIVRD
Sbjct: 164 KEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNK 223
Query: 653 RFHHFKEGSCSCHDYW 668
RFHHF++G+CSC DYW
Sbjct: 224 RFHHFRDGNCSCGDYW 239
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 195/473 (41%), Gaps = 58/473 (12%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEA 76
G +V+ I + G G + A ++ +M D+ D V+++ +I LD A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
++ M+ R KP + I+++ F++ DL K + ++ + V T L+
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV--PDVVTFTILV 370
Query: 137 DMYVKCKNLAYARSVFDGFSGASIV----SWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
D K N A D I+ ++ T+I G + + L++ + LF M GV
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P T + FID YGK GD SA
Sbjct: 431 PTAYTYI-----------------------------------VFIDYYGKSGDSVSALET 455
Query: 253 FDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
F+ ++ K +++ C+A + + A+ E IF + D G+ P+ +T ++ +K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD----RDILM 364
G ++ + S + + G + D + SL++ K +D +++F + ++
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA-CSHSGLLQEGKRLFHKM 423
+N +++G G + A+ELF M +G PN ITF C + + K LF M
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP--MRPNNVVLGSLLAA 474
D G VP V Y ++ L + G + EA M + P+ V L +LL
Sbjct: 636 --DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/472 (18%), Positives = 188/472 (39%), Gaps = 63/472 (13%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLF---DKMVDKDAVSWSTMIRNYGRNGLLDEALDLLR 81
DVF N II + G ++ A F K+V D V+ T++ + L+++A ++
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 82 D-MRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
+ + +P+ + +I + + ++ N C + G + +I
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC-RDGDSILVPIIRYSC 760
Query: 141 KCKNLAYARSVFDGFSG-----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K N++ AR++F+ F+ + ++ +I G + + + +F++++ G IP+
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD- 819
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
V +D YGK G ++
Sbjct: 820 ----------------------------------VATYNFLLDAYGKSGKIDELFELYKE 845
Query: 256 IENKDLMICSA-------MISAYAQTNCIDEVFDIFVQ-MNDCGIRPNEITMVSLLVLCA 307
+ + C A +IS + +D+ D++ M+D P T L+ +
Sbjct: 846 MSTHE---CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DIL 363
K+G L K + + G + + + L++ + K G+ D LF D+
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
++V++ M+G + L F E++ G+ P+ + + + S L+E LF++M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 424 VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLL 472
G+ P + Y ++ L AG+++EA K+ ++ + PN +L+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 18/338 (5%)
Query: 9 ARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMI 64
ART +F + G + N +I E +E A+ +F ++ D +++ ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 65 RNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNC 124
YG++G +DE +L ++M + + I +I + ++ L+ +M +R+
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 125 GQSGVPLSTSLIDMYVKCKNLAYARSVFDGF----SGASIVSWTTMIAGYIHTNNLNEGI 180
+ LID K L A+ +F+G + + +I G+ +
Sbjct: 888 SPTACTYG-PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 181 RLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT--LRNGITISVVLATAFID 238
LF +M +EGV P+ T LV V ++ G LH F +G+ VV I+
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG--LHYFKELKESGLNPDVVCYNLIIN 1004
Query: 239 MYGKCGDFRSARYVFDSIE-----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
GK A +F+ ++ DL +++I ++E I+ ++ G+
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
PN T +L+ + +G E ++ + G +T
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 29/314 (9%)
Query: 279 EVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
E +++ +M G RP+ T SL+V K ++ + ++ G+K + T +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 339 DMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEAQGVI 394
+ + G I+ Y + D D++ + V+I + A E+F +M+
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 395 PNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA-- 452
P+ +T+I L S + L K+ + +M D G VP V + +VD L +AG EA
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 453 -QKLIIDMPMRPN----NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN-VLMS 506
++ D + PN N ++ LL +L ++L G SL Y ++
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL----FGNMESLGVKPTAYTYIVFI 440
Query: 507 NIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVA 566
+ Y + M+ GI+ P + + N S++ R+ E ++I+
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIA--PNI--VACNASLYSLAKAGRDR-EAKQIF---- 491
Query: 567 EMREKLDNVGYTPD 580
L ++G PD
Sbjct: 492 ---YGLKDIGLVPD 502
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 165/378 (43%), Gaps = 49/378 (12%)
Query: 153 DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT---ILSLVKECGT-- 207
DGFS + S+T++I+ + ++ E + +F KM +G P IT IL++ + GT
Sbjct: 202 DGFS-LDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 208 ------VEALEF-GKLLHAFTLRN------------------------GITISVVLATAF 236
VE ++ G A+T G + V A
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 237 IDMYGKCGDFRSARYVFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGI 292
+D+YGK + A V + + + ++ +++ISAYA+ +DE ++ QM + G
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 293 RPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
+P+ T +LL +AG +E I + G K + + + MY G +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 353 LF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS 408
+F DI+ WN +++ G +F EM+ G +P TF + A S
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 409 HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNN 465
G ++ ++ +M+ D G+ P + Y ++ L+R G+ ++++K++ +M +PN
Sbjct: 501 RCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 466 VVLGSLLAACKLHKNVKL 483
+ SLL A K + L
Sbjct: 560 LTYCSLLHAYANGKEIGL 577
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 125/587 (21%), Positives = 243/587 (41%), Gaps = 54/587 (9%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEALDLL 80
D V II M G+ G + A +F+ + + D S++++I + +G EA+++
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGV-PLSTSLIDMY 139
+ M KP+ I I++VF K+G + G+ P + + +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFG-----KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 140 VKCKNLAY---ARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
CK + A VF+ A V++ ++ Y ++ E +++ +M G
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P+ +T SL+ L+ L G V T + + + G SA +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 253 FDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
F+ + N ++ +A I Y E+ IF ++N CG+ P+ +T +LL + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 309 AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID---TTY-RLFAAATDRDILM 364
G + + + G + + +L+ Y++CG + T Y R+ A D+
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 365 WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKR--LFHK 422
+N +++ A G E + ++ EME PN++T+ L A ++ GK L H
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN------GKEIGLMHS 580
Query: 423 MVHDF--GLV-PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHK 479
+ + G++ P+ +V + S+ LL EA++ ++ R + + +L + ++
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 480 NVKLGEWAAG-----QFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEP 534
++ A G + YN LM +++ +G +I R + GI +P
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMY-MHSRSADFGKSEEILREILAKGI--KP 697
Query: 535 GVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDI 581
+ I N ++ + R +R I +EMR N G PD+
Sbjct: 698 DI--ISYNTVIYAYCRNTRMRDASR----IFSEMR----NSGIVPDV 734
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 195/491 (39%), Gaps = 56/491 (11%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEA 76
GF D NA++ +YG+ + A ++ ++MV V+++++I Y R+G+LDEA
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
++L M KP +++ F ++ ++ MRN C + + + I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE-EMRNAGC-KPNICTFNAFI 426
Query: 137 DMYVKCKNLAYARSVFDGFS----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
MY +FD + IV+W T++A + +E +F +M+R G +
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
P T +L+ + E ++ L G+T + + + G + + V
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 253 FDSIEN-----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+E+ +L CS ++ AYA I + + ++ I P + + +L+++C+
Sbjct: 547 LAEMEDGRCKPNELTYCS-LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK-------CGDID-----------T 349
K L + S + ++G D S+V +Y + G +D
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 350 TY---------------------RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
TY + A DI+ +N +I A +F EM
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
G++P+ IT+ + + + + +E + M+ G P Y +VD +
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNR 784
Query: 449 LDEAQKLIIDM 459
DEA+ + D+
Sbjct: 785 KDEAKLFVEDL 795
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 121/550 (22%), Positives = 223/550 (40%), Gaps = 58/550 (10%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGL-L 73
E+GF DV+ ++I + G A +F KM + ++++ ++ +G+ G
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 74 DEALDLLRDMRVARVKPSEIAMISII--------HVFAELVDLKLGKALHGYVMRNRNCG 125
++ L+ M+ + P ++I H A V ++ A Y N
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN-- 318
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARS-----VFDGFSGASIVSWTTMIAGYIHTNNLNEGI 180
+L+D+Y K A V +GFS SIV++ ++I+ Y L+E +
Sbjct: 319 --------ALLDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLDEAM 369
Query: 181 RLFVKMRREGVIPN---EITILSLVKECGTVEALEFGKLLHAF-TLRN-GITISVVLATA 235
L +M +G P+ T+LS + G VE+ + F +RN G ++ A
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES-----AMSIFEEMRNAGCKPNICTFNA 424
Query: 236 FIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
FI MYG G F +FD I + D++ + +++ + Q EV +F +M G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
P T +L+ ++ GS E ++ + G+ D +++ A+ G + +
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 352 RLFAAATDRDILMWNVMISGCAML-----GDGEAALELFVEMEAQGVI-PNDITFIGALK 405
++ A D ++ C++L G + E GVI P + +
Sbjct: 545 KVLAEMEDGRCKPNE--LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR--- 462
CS LL E +R F ++ + G P + MV + R ++ +A ++ M R
Sbjct: 603 VCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 463 PNNVVLGSLLAACKLHKNVKLGEWAAGQFLS--LESHKCGYNVLMSNIYAAENKWGDVSD 520
P+ SL+ + E + L+ ++ YN ++ Y + D S
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY-AYCRNTRMRDASR 720
Query: 521 IRRAMRDAGI 530
I MR++GI
Sbjct: 721 IFSEMRNSGI 730
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 202/479 (42%), Gaps = 50/479 (10%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
++G+ + N ++ Y + G + A +L D M VD D +++ +I + R+ +
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+ LLRDMR + P+E+ ++I+ F+ + V +++
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSN---------------------EGKVLIASQ 359
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
L++ + L++ S + V++ +I G+I N E +++F M +G+ P+
Sbjct: 360 LLN-----EMLSFGLS-------PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
E++ L+ + + + RNG+ + + T ID K G A + +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 255 SIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+ + D++ SA+I+ + + +I ++ G+ PN I +L+ C + G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL----MWN 366
L+ I+ + +G RD LV K G + T IL ++
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
+I+G G+G A +F EM G P T+ LK G L+E ++ F K +H
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK-FLKSLHA 646
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNVVLGSLLAA-CKLHKNV 481
Y ++ + ++G L +A L +M R P++ SL++ C+ K V
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 188/468 (40%), Gaps = 86/468 (18%)
Query: 21 GFHRDVFVCNAI---IMMYGE-VGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
GF+ V+ CNAI ++ GE V F +++ + + D +++ +I G +++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
L++ M + P+ + +++H + C + + L+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWY---------------------CKKGRFKAAIELL 291
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
D ++K K + A + ++ +I +N + +G L MR+ + PNE+
Sbjct: 292 D-HMKSKGV-----------DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRN-----GITISVVLATAFIDMYGKCGDFRSARY 251
T +L+ GK+L A L N G++ + V A ID + G+F+ A
Sbjct: 340 TYNTLINGFSNE-----GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 252 VFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
+F +E K G+ P+E++ LL K
Sbjct: 395 MFYMMEAK-------------------------------GLTPSEVSYGVLLDGLCKNAE 423
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT----DRDILMWNV 367
++ + + + + G+ T ++D K G +D L + D DI+ ++
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF 427
+I+G +G + A E+ + G+ PN I + + C G L+E R++ M+ +
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE- 542
Query: 428 GLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNVVLGSLL 472
G + +V L +AG + EA++ + M + PN V L+
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 101/504 (20%), Positives = 199/504 (39%), Gaps = 70/504 (13%)
Query: 39 VGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIA 94
+G L+ A ++++ M+ +D +++ ++ + + G + EA + +R M + P+ ++
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 95 MISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPL---STSLIDMYVKCKNLAYARSV 151
+I+ + G+ L + + + P SL+ K +L A
Sbjct: 586 FDCLINGYGNS-----GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 152 FDGF----SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV----K 203
+ V + T++ + NL + + LF +M + ++P+ T SL+ +
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 204 ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN----K 259
+ TV A+ F K A R + + V+ T F+D K G +++ Y + ++N
Sbjct: 701 KGKTVIAILFAKEAEA---RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ +AMI Y++ I++ D+ +M + PN T LL +K + ++
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAML 375
I GI D SLV + ++ ++ A R D +N++IS C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 376 GDGEAALEL-----------------------------------FVEMEAQGVIPNDITF 400
G+ A +L EM QG+ P +
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ---KLII 457
IG + G ++ + +M+ P V MV L++ G DEA + ++
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFML 996
Query: 458 DMPMRPNNVVLGSLLAACKLHKNV 481
M + P +L+ C + NV
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNV 1020
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 171/437 (39%), Gaps = 72/437 (16%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEALDLL 80
D + N ++ + G+L A LF +MV + D+ +++++I R G A+
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 81 RDMRV-ARVKPSEIAMISIIHVFAELVD--LKLGKALHGYVMRNR--NCGQSGVPLST-S 134
++ V P+++ ++ VD K G+ G R + N G + ++T +
Sbjct: 712 KEAEARGNVLPNKV-------MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764
Query: 135 LIDMYVKCKNLAYARSVFDGFS----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
+ID Y + + + G ++ ++ ++ GY +++ L+ + G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 191 VIPNEITILSLVKECGTVEALEFG-KLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
++P+++T SLV LE G K+L AF R G+ + F + KC
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVD---RYTFNMLISKCCANGEI 880
Query: 250 RYVFDSIE-------NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
+ FD ++ + D C AM+S + + E + +M+ GI P + L
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF-------- 354
+ + G ++ + + I ++++V AKCG D L
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Query: 355 ----AAAT---------------------------DRDILMWNVMISGCAMLGDGEAALE 383
A+ T D++ +NV+I+G GD A E
Sbjct: 1001 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1060
Query: 384 LFVEMEAQGVIPNDITF 400
L+ EM+ G + N T+
Sbjct: 1061 LYEEMKGDGFLANATTY 1077
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 165/422 (39%), Gaps = 64/422 (15%)
Query: 58 VSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGY 117
++++ MI +NG LDEA+ LL +M + P + ++I+ F ++ K K +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 118 VMRNRNCGQSGVPLSTSLIDM-YVKCKNLA---YARSVFDGFSGASIVSWTTMIAGYIHT 173
+ R +G+ ST + + + C A Y + +G + ++ ++
Sbjct: 504 IYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF-TFNVLVTSLCKA 561
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
+ E M +G++PN ++ L+ G G+ L AF++ + +T
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS-----GEGLKAFSVFDEMTKVGHHP 616
Query: 234 TAFIDMYG-------KCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFD 282
T F YG K G R A S+ D ++ + +++A ++ + +
Sbjct: 617 TFFT--YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674
Query: 283 IFVQMNDCGIRPNEITMVSLLV-LCAK--------------------------------- 308
+F +M I P+ T SL+ LC K
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 309 --AGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DI 362
AG + G + +D G D +++D Y++ G I+ T L ++ ++
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+N+++ G + D + L+ + G++P+ +T + S +L+ G ++
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 854
Query: 423 MV 424
+
Sbjct: 855 FI 856
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 225/537 (41%), Gaps = 81/537 (15%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRN 70
R E GF + CN ++ V +E A +L ++D + V++ T+I + +
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 71 GLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
G +D A DL + M ++P IA ++I + + L +G L + GV
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL------HKGVK 353
Query: 131 LS----TSLIDMYVKCKNLA-----YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIR 181
L +S ID+YVK +LA Y R + G S ++V++T +I G + E
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS-PNVVTYTILIKGLCQDGRIYEAFG 412
Query: 182 LFVKMRREGVIPNEITILSLVK---ECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
++ ++ + G+ P+ +T SL+ +CG + + G L+ ++ G VV+ +D
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 239 MYGKCGDFRSA-RYVFDSIENK---DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
K G A R+ + ++++ +++I + + N DE +F M GI+P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 295 NEITMVSLLVLC------AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID 348
+ T +++ + K +G + + + I D + ++ + KC I+
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 349 TTYRLF----AAATDRDILMWNVMISGCAML----------------------------- 375
+ F + DI+ +N MI G L
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 376 ------GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
D + A+ +F M +G PN +T+ + S S ++ +LF +M + G+
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGI 708
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLI---IDMPMRPNNVVLGSLLAA-CKLHKNVK 482
P + Y ++D L + G +DEA + ID + P+ V L+ CK+ + V+
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 765
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 17/311 (5%)
Query: 183 FVKMRREGVIPNEITILSLVKEC----GTV-EALEFGKLLHAFTLRNGI-TISVVLATAF 236
F K+ R G+ P+ ++ V + G V +AL+F +L+ R GI + + VL
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 237 IDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNE 296
+D R V D +++ +I+ + + +D FD+F M GI P+
Sbjct: 264 VDQIEVAS--RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY----R 352
I +L+ KAG L MG + S +G+K D + +S +D+Y K GD+ T R
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 353 LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
+ +++ + ++I G G A ++ ++ +G+ P+ +T+ + G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLG 469
L+ G L+ M+ G P V YG +VD LS+ GL+ A + + M +R N VV
Sbjct: 442 LRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 470 SLLAA-CKLHK 479
SL+ C+L++
Sbjct: 501 SLIDGWCRLNR 511
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 197/449 (43%), Gaps = 33/449 (7%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDE 75
G DV V ++ I +Y + G L A ++ +M + + V+++ +I+ ++G + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A + + ++PS + S+I F + +L+ G AL+ +++ V + L
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY--PPDVVIYGVL 467
Query: 136 IDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGV 191
+D K + +A G SI V + ++I G+ N +E +++F M G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 192 IPNEITILSLVKECGTVEAL------EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
P+ T ++++ +A G L RN I+ + + I + KC
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 246 FRSARYVFDS-IENK---DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVS 301
A F++ IE K D++ + MI Y +DE IF + PN +T+
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR- 360
L+ + K ++ + S + ++G K + L+D ++K DI+ +++LF ++
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 361 ---DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGK 417
I+ ++++I G G + A +F + ++P+ + + ++ G L E
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 418 RLFHKMVHDFGLVPKVEHYGCMVDLLSRA 446
L+ M+ + G+ P DLL RA
Sbjct: 768 LLYEHMLRN-GVKPD--------DLLQRA 787
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 143/335 (42%), Gaps = 20/335 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVG----SLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
G+ DV + ++ + G ++ F+ ++ + + + V ++++I + R DEA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 77 LDLLRDMRVARVKPSEIAMISIIHV------FAELVDLKLGKALHGYVMRNRNCGQSGVP 130
L + R M + +KP +++ V F + + +G L + RN+ + +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI--SADIA 573
Query: 131 LSTSLIDMYVKCKNLAYARSVF----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
+ +I + KC + A F +G IV++ TMI GY L+E R+F +
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 187 RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
+ PN +T+ L+ ++ + + G + V +D + K D
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 247 RSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
+ +F+ ++ K ++ S +I + +DE +IF Q D + P+ + L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSL 337
+ K G L ++ ++ + G+K D L+ +L
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 123/566 (21%), Positives = 229/566 (40%), Gaps = 110/566 (19%)
Query: 15 RFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRN 70
R E GF + CN ++ V +E A +L ++D + V++ T+I + +
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 71 GLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
G +D A DL + M ++P IA ++I + + L +G L + GV
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL------HKGVK 353
Query: 131 LS----TSLIDMYVKCKNLA-----YARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIR 181
L +S ID+YVK +LA Y R + G S ++V++T +I G + E
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS-PNVVTYTILIKGLCQDGRIYEAFG 412
Query: 182 LFVKMRREGVIPNEITILSLVK---ECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
++ ++ + G+ P+ +T SL+ +CG + + G L+ ++ G VV+ +D
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 239 MYGKCGDFRSA-RYVFDSIENK---DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
K G A R+ + ++++ +++I + + N DE +F M GI+P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 295 NEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA------------ 342
+ T +++ + G LE ++ + K G++ D +L+D +
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 343 -----------------------KCGDIDTTYRLF----AAATDRDILMWNVMISGCAML 375
KC I+ + F + DI+ +N MI G L
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 376 -----------------------------------GDGEAALELFVEMEAQGVIPNDITF 400
D + A+ +F M +G PN +T+
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 401 IGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLI---I 457
+ S S ++ +LF +M + G+ P + Y ++D L + G +DEA + I
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 458 DMPMRPNNVVLGSLLAA-CKLHKNVK 482
D + P+ V L+ CK+ + V+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVE 794
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 17/311 (5%)
Query: 183 FVKMRREGVIPNEITILSLVKEC----GTV-EALEFGKLLHAFTLRNGI-TISVVLATAF 236
F K+ R G+ P+ ++ V + G V +AL+F +L+ R GI + + VL
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 237 IDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNE 296
+D R V D +++ +I+ + + +D FD+F M GI P+
Sbjct: 264 VDQIEVAS--RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY----R 352
I +L+ KAG L MG + S +G+K D + +S +D+Y K GD+ T R
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 353 LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGL 412
+ +++ + ++I G G A ++ ++ +G+ P+ +T+ + G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 413 LQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLG 469
L+ G L+ M+ G P V YG +VD LS+ GL+ A + + M +R N VV
Sbjct: 442 LRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 470 SLLAA-CKLHK 479
SL+ C+L++
Sbjct: 501 SLIDGWCRLNR 511
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 201/476 (42%), Gaps = 58/476 (12%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDE 75
G DV V ++ I +Y + G L A ++ +M + + V+++ +I+ ++G + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH------GY------------ 117
A + + ++PS + S+I F + +L+ G AL+ GY
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 118 ----------VMRN--RNCGQS---GVPLSTSLIDMYVKCKNLAYARSVFD--GFSG--A 158
MR + GQS V + SLID + + A VF G G
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLH 218
+ ++TT++ I L E + LF +M + G+ P+ + +L+ G L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 219 AFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS-IENK---DLMICSAMISAYAQT 274
RN I+ + + I + KC A F++ IE K D++ + MI Y
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 275 NCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLK 334
+DE IF + PN +T+ L+ + K ++ + S + ++G K +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 335 TSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEA 390
L+D ++K DI+ +++LF ++ I+ ++++I G G + A +F +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRA 446
++P+ + + ++ G L E L+ M+ + G+ P DLL RA
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPD--------DLLQRA 816
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 142/325 (43%), Gaps = 14/325 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALDLL 80
+V V N++I + + + A ++F M + D +++T++R G L+EAL L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
M ++P +A ++I F + + +G L + RN+ + + + +I +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI--SADIAVCNVVIHLLF 612
Query: 141 KCKNLAYARSVF----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
KC + A F +G IV++ TMI GY L+E R+F ++ PN +
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T+ L+ ++ + + G + V +D + K D + +F+ +
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 257 ENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
+ K ++ S +I + +DE +IF Q D + P+ + L+ K G L
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSL 337
++ ++ + G+K D L+ +L
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 205/498 (41%), Gaps = 78/498 (15%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEALDLL 80
D++ N +I + L A + KM+ + D V+ S+++ Y + EA+ L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 81 RDMRVARVKPSEIAMISIIHVF---------AELVDLKLGKA------LHGYVMRNRNCG 125
M V +P+ + ++IH L+D + + +G V+ N C
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV-NGLCK 232
Query: 126 QSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVK 185
+ + L+ SL+ + + G A +V +TT+I + N+N+ + LF +
Sbjct: 233 RGDIDLALSLL------------KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 186 MRREGVIPNEITILSLVK-ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
M +G+ PN +T SL++ C + +LL R I +VV +A ID + K G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEG 339
Query: 245 DFRSARYVFDSIENK-----------------------------DLMIC----------S 265
A ++D + + +LMI +
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 266 AMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQ 325
+I + + ++E ++F +M+ G+ N +T +L+ +AG +M + I +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 326 GIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAA 381
G+ D + L+D K G ++ +F + + DI +N+MI G G E
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
+LF + +GV PN I + + GL +E LF +M D G +P Y ++
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIR 578
Query: 442 LLSRAGLLDEAQKLIIDM 459
R G + +LI +M
Sbjct: 579 ARLRDGDKAASAELIKEM 596
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 212/490 (43%), Gaps = 77/490 (15%)
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAE-------------LVDLKLGKALHGY-V 118
LD+A+DL +M +R PS + ++ A+ + +L++ L+ Y +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 119 MRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNE 178
+ N C +S +PL+ +++ +K L Y IV+ ++++ GY H ++E
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMK---LGYE---------PDIVTLSSLLNGYCHGKRISE 168
Query: 179 GIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFI- 237
+ L +M PN +T F L+H L N + +V L +
Sbjct: 169 AVALVDQMFVMEYQPNTVT---------------FNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 238 -----DMY-------GKC--GDFRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDE 279
D++ G C GD A + +E D++I + +I A +++
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 280 VFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVD 339
++F +M++ GIRPN +T SL+ G + S + ++ I + ++L+D
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 340 MYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIP 395
+ K G + +L+ + D DI ++ +I+G M + A +F M ++ P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 396 NDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL 455
N +T+ +K + ++EG LF +M GLV Y ++ L +AG D AQK+
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 456 IIDM---PMRPN----NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI 508
M + P+ +++L L KL K + + E+ Q +E YN+++ +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL--QKSKMEPDIYTYNIMIEGM 510
Query: 509 YAA---ENKW 515
A E+ W
Sbjct: 511 CKAGKVEDGW 520
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 57/453 (12%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
G VF N +I + G +E AR LF++M + D V++++MI +G+ G LD+
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
+ +M+ +P I ++I+ F + L +G
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG------------------------- 351
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
L + R + ++VS++T++ + + + I+ +V MRR G++PNE
Sbjct: 352 --------LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRN-----GITISVVLATAFIDMYGKCGDFRSARY 251
T SL+ + G L AF L N G+ +VV TA ID + A
Sbjct: 404 TYTSLID-----ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 252 VFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+F ++ +L +A+I + + +D ++ ++ GI+P+ + + +
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI----L 363
+E K + + + + GIK ++ + T+L+D Y K G+ L + DI +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQ-GVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+ V+I G A++ F + G+ N F + ++ LF +
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 423 MVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL 455
MV GLVP Y ++D + G + EA L
Sbjct: 639 MVQK-GLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 177/455 (38%), Gaps = 93/455 (20%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSL----EFARQLFDKMVDKDAVSWSTMIRNYGRNGL 72
CCE DV NA+I + + G L EF R++ + + VS+ST++ + + G+
Sbjct: 327 CCE----PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
+ +A+ DMR + P+E S+I + K+G + + N Q GV +
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDA-----NCKIGNLSDAFRLGNEML-QVGVEWN 436
Query: 133 ----TSLIDMYVKCKNLAYARSVFDGFSGASIV----SWTTMIAGYIHTNNLNEGIRLFV 184
T+LID + + A +F A ++ S+ +I G++ N++ + L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 185 KMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
+++ G+ P+ + + + ++E +E K++ GI + ++ T +D Y K G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 245 DFRSARYVFDSIENKDL----------------------------------------MIC 264
+ ++ D ++ D+ I
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+AMI + N ++ +F QM G+ P+ SL+ K G++ + + +
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALEL 384
G+K D TSLV W +S C L + LE
Sbjct: 677 IGMKLDLLAYTSLV--------------------------WG--LSHCNQLQKARSFLE- 707
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
EM +G+ P+++ I LK G + E L
Sbjct: 708 --EMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
C+ ++ +A+ D+V F M G RP T ++ K G +E + + +
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATD----RDILMWNVMISGCAMLGDGE 379
+G+ DT S++D + K G +D T F D D++ +N +I+ G
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
LE + EM+ G+ PN +++ + A G++Q+ + + M GLVP Y +
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSL 408
Query: 440 VDLLSRAGLLDEAQKL 455
+D + G L +A +L
Sbjct: 409 IDANCKIGNLSDAFRL 424
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 135/321 (42%), Gaps = 17/321 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
G +V A+I + ++ A +LF KM V + S++ +I + + +D A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSL 135
L+LL +++ +KP + + I L ++ K + + + CG ++ + T+L
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM---KECGIKANSLIYTTL 548
Query: 136 IDMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE-G 190
+D Y K N + D ++V++ +I G +++ + F ++ + G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ N +++ +E L ++ G+ T+ +D K G+ A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 251 YVFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
+ D + DL+ ++++ + N + + +M GI P+E+ +S+L
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Query: 307 AKAGSLEMGKWIHSYIDKQGI 327
+ G ++ + SY+ K +
Sbjct: 729 YELGCIDEAVELQSYLMKHQL 749
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 8/214 (3%)
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
+I +Y + N + E ++F QM + G P+ +T +L+ + AKAG L++ ++ + + G
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAAL 382
+ DT + +++ K G + +RLF +++ +N+MI+ A + E AL
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+L+ +M+ G P+ +T+ ++ H G L+E + +F +M VP YG +VDL
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPDEPVYGLLVDL 578
Query: 443 LSRAGLLDEA---QKLIIDMPMRPNNVVLGSLLA 473
+AG +D+A + ++ +RPN SLL+
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 23/314 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
+ GF D ++ G +L D+MV + V+++ +I +YGR L
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EA+++ M+ A +P + ++I + A+ L + ++ R + G S + S
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY---QRMQEAGLSPDTFTYS 468
Query: 135 -LIDMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+I+ K +L A +F G ++V++ MIA + N ++L+ M+
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 190 GVIPNEIT---ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
G P+++T ++ ++ CG +E E + +N + V +D++GK G+
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAE--GVFAEMQRKNWVPDEPVYGL-LVDLWGKAGNV 585
Query: 247 RSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
A + ++ ++ C++++S + + + + E +++ M G+ P+ T L
Sbjct: 586 DKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Query: 303 LVLCAKAGS-LEMG 315
L C A S +MG
Sbjct: 646 LSCCTDARSNFDMG 659
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+ V++ +I Y N L E + +F +M+ G P+ +T +L+ L+ +
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYAQ 273
+ G++ + I+ GK G +A +F + + +L+ + MI+ +A+
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
+ ++ M + G +P+++T ++ + G LE + + + + ++ D +
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPV 571
Query: 334 KTSLVDMYAKCGDIDTTYR----LFAAATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
LVD++ K G++D ++ + A ++ N ++S + A L M
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 390 AQGVIPNDITFIGALKACS 408
A G+ P+ T+ L C+
Sbjct: 632 ALGLHPSLQTYTLLLSCCT 650
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/558 (22%), Positives = 228/558 (40%), Gaps = 53/558 (9%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAV----SWSTMIRNYGRNG 71
F + +V N ++ G G + R + +M + ++ ++ YG+ G
Sbjct: 135 FQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAG 194
Query: 72 LLDEALDLLRDMRVARVKPSEIAMISIIHVF-----------------AELVDLKLGK-- 112
L+ EAL ++ M P E+ M +++ VF A VDL L
Sbjct: 195 LVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSID 254
Query: 113 --ALHGYVMRNRNCGQSGVPLSTSLIDMYVKC---KNLAYARSVFDGFSGASIVS-WTTM 166
+G N Q LS L + + K+L +A + S + T+
Sbjct: 255 DFPKNGSAQSPVNLKQF---LSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTL 311
Query: 167 IAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGI 226
I Y LN+ LF +M + GV + +T +++ CGT L + L GI
Sbjct: 312 IDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGI 371
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFD 282
+ + ++ GD +A + I D + A++ Q + EV
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEA 431
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+ +M+ IR +E ++ ++ + G + K + + T L +++D+YA
Sbjct: 432 VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVYA 490
Query: 343 KCG---DIDTTY--RLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
+ G + +T + + + D+L +NVMI E AL LF M+ QG P++
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
T+ + + L+ E +R+ +M+ D G P + Y M+ R GLL +A L
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYE 609
Query: 458 DMP---MRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYN-VLMSNIYAAEN 513
M ++PN VV GSL+ + E A F +E H N ++++++ A +
Sbjct: 610 AMEKTGVKPNEVVYGSLING---FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 514 KWGDVSDIRRA---MRDA 528
K G + + RR M+D+
Sbjct: 667 KVGCLEEARRVYDKMKDS 684
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 202/482 (41%), Gaps = 48/482 (9%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLD 74
++G D N +I G G L A L KM +K D +++ ++ + G ++
Sbjct: 333 KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIE 392
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNR-NCGQSGVPL-- 131
AL+ R +R + P + +++H+ + + +A+ + RN + VP+
Sbjct: 393 AALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Query: 132 --------------------------STSL---IDMYVKCKNLAYARSVFDGFSGAS--- 159
ST+L ID+Y + A +VF G S
Sbjct: 453 QMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR 512
Query: 160 --IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
++ + MI Y + + LF M+ +G P+E T SL + V+ ++ + +
Sbjct: 513 NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRI 572
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL----MICSAMISAYAQ 273
A L +G A I Y + G A +++++E + ++ ++I+ +A+
Sbjct: 573 LAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
+ ++E F M + G++ N I + SL+ +K G LE + ++ + D
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 334 KTSLVDMYAKCGDIDTTYRLFAAATDR---DILMWNVMISGCAMLGDGEAALELFVEMEA 390
S++ + A G + +F A ++ D++ + M+ +G + A+E+ EM
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLD 450
G++ + +F + + G L E LFH+M+ + L+ + + LL + G+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 451 EA 452
EA
Sbjct: 813 EA 814
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 176/445 (39%), Gaps = 85/445 (19%)
Query: 59 SWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV 118
+++T+I YG+ G L++A +L +M + V + ++IH
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH------------------ 348
Query: 119 MRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIV----SWTTMIAGYIHTN 174
CG G +L+ A S+ I ++ +++ +
Sbjct: 349 ----TCGTHG---------------HLSEAESLLKKMEEKGISPDTKTYNILLSLHADAG 389
Query: 175 NLNEGIRLFVKMRREGVIPNEIT------ILSLVKECGTVEAL----------------- 211
++ + + K+R+ G+ P+ +T IL K VEA+
Sbjct: 390 DIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Query: 212 -------EFGKLLHAFTLRNGITISVVLAT----AFIDMYGKCGDFRSARYVFDSIEN-- 258
G ++ A L + VL++ A ID+Y + G + A VF N
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMS 509
Query: 259 ---KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
D++ + MI AY + ++ +F M + G P+E T SL + A ++
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI----LMWNVMISG 371
+ I + + G K K +++ Y + G + L+ A + +++ +I+G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVP 431
A G E A++ F ME GV N I +KA S G L+E +R++ KM G P
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GP 688
Query: 432 KVEHYGCMVDLLSRAGLLDEAQKLI 456
V M+ L + G++ EA+ +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIF 713
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 158/410 (38%), Gaps = 84/410 (20%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGLLDE 75
G D N++ M V ++ A+++ +M+D +++ MI +Y R GLL +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+DL M VKP+E+ S+I+ FAE + +A+ + M + QS + TSL
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAE--SGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 136 IDMYVKCKNLAYARSVFDGFSGAS------------------------------------ 159
I Y K L AR V+D +
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 160 --IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIP-----NEI---------------- 196
++S+ TM+ Y L+E I + +MR G++ N++
Sbjct: 722 CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCEL 781
Query: 197 ------------------TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
T+ +L+K+ G V + +L A+ + + AT F
Sbjct: 782 FHEMLVERKLLLDWGTFKTLFTLLKK-GGVPSEAVSQLQTAYNEAKPLATPAITATLFSA 840
Query: 239 MYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
M S + + ++ +A+I Y+ + ID +++M + G+ P+ +T
Sbjct: 841 MGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
Query: 299 MVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID 348
L+ + KAG +E K +HS + ++ L ++ D Y D
Sbjct: 901 QAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQD 950
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/495 (20%), Positives = 214/495 (43%), Gaps = 70/495 (14%)
Query: 43 EFARQLFDKMVDKDAVSWST------MIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMI 96
E+A +F + + + +ST ++++Y R L+D+AL ++ + P ++
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 97 SII--------------HVFAELVDLKLGKALHGY---------------------VMRN 121
+++ +VF E+++ ++ + Y M
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 122 RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS----------GASIVSWTTMIAGYI 171
+ C + V +T LID Y K R + DGF +++S+ +I G
Sbjct: 234 KGCLPNVVTYNT-LIDGYCKL------RKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 172 HTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVV 231
+ E + +M R G +E+T +L+K ++HA LR+G+T SV+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 232 LATAFIDMYGKCGDFRSARYVFDSIENKDL----MICSAMISAYAQTNCIDEVFDIFVQM 287
T+ I K G+ A D + + L + ++ ++Q ++E + + +M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 288 NDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDI 347
ND G P+ +T +L+ G +E + + ++G+ D ++++ + + D+
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 348 DTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGA 403
D R+ ++ D + ++ +I G + A +L+ EM G+ P++ T+
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 404 LKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR- 462
+ A G L++ +L ++MV G++P V Y +++ L++ EA++L++ +
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 463 --PNNVVLGSLLAAC 475
P++V +L+ C
Sbjct: 586 SVPSDVTYHTLIENC 600
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 190/436 (43%), Gaps = 57/436 (13%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLD 74
E+ +VF N +I + G+++ A LFDKM K + V+++T+I Y + +D
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
+ LLR M + ++P+ I+ +I+ + ++ + NR +
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCR--EGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 135 LIDMYVKCKN-----LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
LI Y K N + +A + G + S++++T++I N+N + +MR
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAF-TLR----NGITISVVLATAFIDMYGKCG 244
G+ PNE T +LV + G + A+ LR NG + SVV A I+ + G
Sbjct: 375 GLCPNERTYTTLVDGFS-----QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 245 DFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMV 300
A V + ++ K D++ S ++S + ++ +DE + +M + GI+P+ IT
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 301 SLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR 360
SL+ QG + K + D+Y + +
Sbjct: 490 SLI---------------------QGFCEQRRTKEA-CDLYEE---------MLRVGLPP 518
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
D + +I+ M GD E AL+L EM +GV+P+ +T+ + + +E KRL
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 421 HKMVHDFGLVPKVEHY 436
K+ ++ + V ++
Sbjct: 579 LKLFYEESVPSDVTYH 594
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 42/323 (13%)
Query: 6 FISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWS 61
+++ R R +NGF V NA+I + G +E A + + M +K D VS+S
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 62 TMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRN 121
T++ + R+ +DEAL + R+M +KP I S+I F E K L+ ++R
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR- 513
Query: 122 RNCGQSGVPLS----TSLIDMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHT 173
G+P T+LI+ Y +L A + + +V+++ +I G
Sbjct: 514 -----VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 174 NNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLA 233
+ E RL +K+ E +P+++T +L++ C +E L+ F ++ +T
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT------ 622
Query: 234 TAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMND 289
A VF+S+ K D + MI + + I + + ++ +M
Sbjct: 623 --------------EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 290 CGIRPNEITMVSLLVLCAKAGSL 312
G + +T+++L+ K G +
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKV 691
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/539 (21%), Positives = 226/539 (41%), Gaps = 30/539 (5%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLD 74
E + VF N ++ + A LFD+M + D ++ST+I ++G+ G+ D
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
AL L+ M RV + ++I + L D KA+ + R+ + S
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY--SKAISIFSRLKRSGITPDLVAYNS 265
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
+I++Y K K AR + + A + VS++T+++ Y+ + E + +F +M+
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ T ++ G ++ ++ L + I +VV + +YG+ F A
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 251 YVFDSIENKDL----MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
++F ++ KD+ + + MI Y +T ++ ++ +M GI PN IT +++ +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
KAG L+ + + G++ D L +++ Y + G + RL D +
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRE 505
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL-KACSHSGLLQEGKRLFHKMVH 425
I+ A G E A +F + G + DI+ G + S + +F KM
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEV-KDISVFGCMINLYSRNQRYVNVIEVFEKM-R 563
Query: 426 DFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR----PNNVVLGSLLAACKLHKNV 481
G P +++ + ++A + +M P+ V L L+ +
Sbjct: 564 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML----SLYSSK 619
Query: 482 KLGEWAAGQFLSLES----HKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKE-PG 535
K E F LES + +++++ +Y +K D S + MR+ GI K PG
Sbjct: 620 KDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 165/427 (38%), Gaps = 87/427 (20%)
Query: 175 NLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLAT 234
+ ++ I +F +++R G+ P+ + S++ G + +LL G+ + V +
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 235 AFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+ +Y + F A VF ++ DL C+ MI Y Q + + E +F +
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
I PN ++ ++L + +A G+ IH + Q ++D
Sbjct: 360 DIEPNVVSYNTILRVYGEAELF--GEAIHLFRLMQ--RKDI------------------- 396
Query: 351 YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHS 410
+++++ +N MI + E A L EM+++G+ PN IT+ + +
Sbjct: 397 --------EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 411 GLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGS 470
G L LF K+ + +V Y M+ R GL+ A++L+ ++ + P+N+ +
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQV-LYQTMIVAYERVGLMGHAKRLLHELKL-PDNIPRET 506
Query: 471 LLAACKLHKNVKLGEWAAGQ-FLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
+ + W Q F S E M N+Y+ ++
Sbjct: 507 AITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY-------------- 552
Query: 530 ISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPD--ISAVLMN 587
VN V E+ EK+ GY PD + A+++N
Sbjct: 553 -----------VN----------------------VIEVFEKMRTAGYFPDSNVIAMVLN 579
Query: 588 IDGEEKE 594
G+++E
Sbjct: 580 AYGKQRE 586
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 189/450 (42%), Gaps = 54/450 (12%)
Query: 59 SWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAEL----VDLKLGK-- 112
S+ ++RN N ++ALDL M +R PS I ++ V A++ V + L +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 113 --------------ALHGYVMRNRNCGQS-------------GVPLSTSLIDMYVKCKNL 145
+H + ++ C S + TSL++ Y +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 146 AYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
A ++FD G ++V++TT+I +LN + LF +M G PN +T +L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 202 VKECGTVEALEFGKLLHAFTLRN----GITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
V G E +G A+ LR+ I +V+ TA ID + K G A+ +++ +
Sbjct: 230 VT--GLCEIGRWGD--AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 258 N----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE 313
D+ ++I+ +DE +F M G PNE+ +L+ K+ +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 314 MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMI 369
G I + ++G+ +T T L+ Y G D +F + R DI +NV++
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
G G E AL +F M + + N +T+ ++ G +++ LF + G+
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GM 464
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
P V Y M+ R GL+ EA L M
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 26/301 (8%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
GF +V +I + L A +LF++M + V+++ ++ G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP---LST 133
LLRDM R++P+ I ++I F +K+GK + + N S P
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAF-----VKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 134 SLIDMYVKCKNLAYARSVF-----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
SLI+ L AR +F +G ++ +TT+I G+ + + +G+++F +M +
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVI-YTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC--GDF 246
+GV+ N IT L++ V + + F + + T + + G C G
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQ--EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNC----IDEVFDIFVQMNDCGIRPNEITMVSL 302
A +F+ + +++ I + Q C +++ FD+F + G++PN IT ++
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 303 L 303
+
Sbjct: 475 I 475
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 38/393 (9%)
Query: 176 LNEGIRLFVKMRREGVIPN----EITILSLVKEC-GTVEAL----EFGKLLHAFTLRNGI 226
L E R+F KM G++ + + + L K+C T A+ EF ++ G+
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--------GV 242
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFD 282
+V I + G + A ++ +E K D++ S +++ Y + +D+V+
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+ M G++PN S++ L + L + S + +QGI DT + T+L+D +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 343 KCGDIDTTYRLFAAATDRDI----LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
K GDI + F RDI L + +ISG +GD A +LF EM +G+ P+ +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
TF + +G +++ R+ + M+ G P V Y ++D L + G LD A +L+ +
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 459 M---PMRPN----NVVLGSLLAACKLHKNVKL-GEWAAGQFLSLESHKCGYNVLMSNIYA 510
M ++PN N ++ L + + + VKL GE+ A L + Y LM + Y
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLM-DAYC 537
Query: 511 AENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG 543
+ +I + M G+ ++ +NG
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 187/445 (42%), Gaps = 52/445 (11%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
N +I ++G ++ A L M K D +S+ST++ Y R G LD+ L+ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+KP+ SII + + KL +A + R + T+LID + K ++
Sbjct: 310 KGLKPNSYIYGSIIGLLCRIC--KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 146 AYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
A F I +++T +I+G+ ++ E +LF +M +G+ P+ +T L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ ++ +H ++ G + +VV T ID K GD SA
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN----------- 476
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
++ +M G++PN T S++ K+G++E +
Sbjct: 477 --------------------ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTY----RLFAAATDRDILMWNVMISG-C--AM 374
+ G+ DT T+L+D Y K G++D + I+ +NV+++G C M
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
L DGE L M A+G+ PN TF +K L+ ++ M G+ P +
Sbjct: 577 LEDGEKLLNW---MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGK 632
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDM 459
Y +V +A + EA L +M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEM 657
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 187/433 (43%), Gaps = 72/433 (16%)
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV----KECGTVEALEFGK 215
++S++T++ GY L++ +L M+R+G+ PN S++ + C EA E
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE--- 337
Query: 216 LLHAFT--LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL----MICSAMIS 269
AF+ +R GI V+ T ID + K GD R+A F + ++D+ + +A+IS
Sbjct: 338 ---AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
+ Q + E +F +M G+ P+ +T L+ KAG ++ +H+++ + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 330 DTKLKTSLVDMYAKCGDIDTT----YRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
+ T+L+D K GD+D+ + ++ +I +N +++G G+ E A++L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 386 VEMEAQGVIPNDITFIGALKA------------------------------------CSH 409
E EA G+ + +T+ + A C H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNV 466
G+L++G++L + M+ G+ P + +V L A + DM R P+
Sbjct: 575 -GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI------YAAENKWGDVSD 520
+L+ +N+K FL E G++V +S + K+ + +
Sbjct: 633 TYENLVKGHCKARNMK-----EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 521 IRRAMRDAGISKE 533
+ MR G++ +
Sbjct: 688 VFDQMRREGLAAD 700
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
G ++F N+I+ + G++E A +L + ++ D V+++T++ Y ++G +D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
++L++M ++P+ I F L++ G LHG ++
Sbjct: 546 QEILKEMLGKGLQPT-------IVTFNVLMN---GFCLHG------------------ML 577
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
+ K N A+ + + ++ +++ Y NNL ++ M GV P+
Sbjct: 578 EDGEKLLNWMLAKGI-----APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T +LVK ++ L G ++SV + I + K F AR VFD +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEI 297
+ L E+FD F G RP+ I
Sbjct: 693 RREGLA-------------ADKEIFDFFSDTKYKGKRPDTI 720
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 139/338 (41%), Gaps = 16/338 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALDLL 80
DV AII + ++G + A +LF +M ++ D+V+++ +I Y + G + +A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
M A P+ + ++I + DL L + + G Q + S+++
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGL 501
Query: 140 VKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K N+ A + F A + V++TT++ Y + +++ + +M +G+ P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+T L+ LE G+ L + L GI + + + Y + ++A ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 256 IENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
+ ++ D ++ + + + E + +F +M G + T L+ K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
+ + + ++G+ D ++ D K DT
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDT 719
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 38/393 (9%)
Query: 176 LNEGIRLFVKMRREGVIPN----EITILSLVKEC-GTVEAL----EFGKLLHAFTLRNGI 226
L E R+F KM G++ + + + L K+C T A+ EF ++ G+
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--------GV 242
Query: 227 TISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFD 282
+V I + G + A ++ +E K D++ S +++ Y + +D+V+
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 283 IFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYA 342
+ M G++PN S++ L + L + S + +QGI DT + T+L+D +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 343 KCGDIDTTYRLFAAATDRDI----LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDI 398
K GDI + F RDI L + +ISG +GD A +LF EM +G+ P+ +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 399 TFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIID 458
TF + +G +++ R+ + M+ G P V Y ++D L + G LD A +L+ +
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 459 M---PMRPN----NVVLGSLLAACKLHKNVKL-GEWAAGQFLSLESHKCGYNVLMSNIYA 510
M ++PN N ++ L + + + VKL GE+ A L + Y LM + Y
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLM-DAYC 537
Query: 511 AENKWGDVSDIRRAMRDAGISKEPGVSSIEVNG 543
+ +I + M G+ ++ +NG
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 187/445 (42%), Gaps = 52/445 (11%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEALDLLRDMRV 85
N +I ++G ++ A L M K D +S+ST++ Y R G LD+ L+ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
+KP+ SII + + KL +A + R + T+LID + K ++
Sbjct: 310 KGLKPNSYIYGSIIGLLCRIC--KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 146 AYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSL 201
A F I +++T +I+G+ ++ E +LF +M +G+ P+ +T L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 202 VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL 261
+ ++ +H ++ G + +VV T ID K GD SA
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN----------- 476
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
++ +M G++PN T S++ K+G++E +
Sbjct: 477 --------------------ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTY----RLFAAATDRDILMWNVMISG-C--AM 374
+ G+ DT T+L+D Y K G++D + I+ +NV+++G C M
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 375 LGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVE 434
L DGE L M A+G+ PN TF +K L+ ++ M G+ P +
Sbjct: 577 LEDGEKLLNW---MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGK 632
Query: 435 HYGCMVDLLSRAGLLDEAQKLIIDM 459
Y +V +A + EA L +M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEM 657
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 187/433 (43%), Gaps = 72/433 (16%)
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV----KECGTVEALEFGK 215
++S++T++ GY L++ +L M+R+G+ PN S++ + C EA E
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE--- 337
Query: 216 LLHAFT--LRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDL----MICSAMIS 269
AF+ +R GI V+ T ID + K GD R+A F + ++D+ + +A+IS
Sbjct: 338 ---AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
+ Q + E +F +M G+ P+ +T L+ KAG ++ +H+++ + G
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 330 DTKLKTSLVDMYAKCGDIDTT----YRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
+ T+L+D K GD+D+ + ++ +I +N +++G G+ E A++L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 386 VEMEAQGVIPNDITFIGALKA------------------------------------CSH 409
E EA G+ + +T+ + A C H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNV 466
G+L++G++L + M+ G+ P + +V L A + DM R P+
Sbjct: 575 -GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI------YAAENKWGDVSD 520
+L+ +N+K FL E G++V +S + K+ + +
Sbjct: 633 TYENLVKGHCKARNMK-----EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 521 IRRAMRDAGISKE 533
+ MR G++ +
Sbjct: 688 VFDQMRREGLAAD 700
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
G ++F N+I+ + G++E A +L + ++ D V+++T++ Y ++G +D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
++L++M ++P+ I F L++ G LHG ++
Sbjct: 546 QEILKEMLGKGLQPT-------IVTFNVLMN---GFCLHG------------------ML 577
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
+ K N A+ + + ++ +++ Y NNL ++ M GV P+
Sbjct: 578 EDGEKLLNWMLAKGI-----APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 197 TILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSI 256
T +LVK ++ L G ++SV + I + K F AR VFD +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 257 ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEI 297
+ L E+FD F G RP+ I
Sbjct: 693 RREGLA-------------ADKEIFDFFSDTKYKGKRPDTI 720
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 139/338 (41%), Gaps = 16/338 (4%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALDLL 80
DV AII + ++G + A +LF +M ++ D+V+++ +I Y + G + +A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCG-QSGVPLSTSLIDMY 139
M A P+ + ++I + DL L + + G Q + S+++
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGL 501
Query: 140 VKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K N+ A + F A + V++TT++ Y + +++ + +M +G+ P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 196 ITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
+T L+ LE G+ L + L GI + + + Y + ++A ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 256 IENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGS 311
+ ++ D ++ + + + E + +F +M G + T L+ K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 312 LEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
+ + + ++G+ D ++ D K DT
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDT 719
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/550 (22%), Positives = 227/550 (41%), Gaps = 66/550 (12%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLF-DKMVDKDAVSWSTMIRNYGRNGLLDEALDL 79
G DVF N +I + +VG L FA L ++++ D V+++T+I +GL DEA
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 80 LRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMY 139
L +M + P ++ ++I F ++ + KAL + + + T L+ Y
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI------SELNLITHTILLSSY 237
Query: 140 VKCKNL--AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT 197
+ AY V GF +V+++++I + EG L +M V PN +T
Sbjct: 238 YNLHAIEEAYRDMVMSGFD-PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 198 ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE 257
+LV L++ + GI + +V+ T +D K GD R A
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA-------- 348
Query: 258 NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKW 317
++ F + ++ N PN +T +L+ KAG L ++
Sbjct: 349 --------------------EKTFKMLLEDNQV---PNVVTYTALVDGLCKAGDLSSAEF 385
Query: 318 IHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDIL----MWNVMISGCA 373
I + + ++ + + +S+++ Y K G ++ L D++++ + +I G
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 374 MLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKV 433
G E A+EL EM GV N+ + G ++E K L MV G+
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK-GVTLDQ 504
Query: 434 EHYGCMVDLLSRAGLLDEAQKLIIDMPMR--PNNVVLGSLLAACKLHKNVKLGEWAAGQF 491
+Y ++D+ + G + A +M R P +VV ++L + L +WA
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGM 564
Query: 492 LS--LESHKCGYNVLMSNIYAAENKWGDVSDIRR---AMRDAGISKEPGVSSIEV----- 541
+E +N++M+ ++ K GD I + M+ GI +P + S +
Sbjct: 565 REKGIEPDIATFNIMMN----SQRKQGDSEGILKLWDKMKSCGI--KPSLMSCNIVVGML 618
Query: 542 --NGSVHEFI 549
NG + E I
Sbjct: 619 CENGKMEEAI 628
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 129/656 (19%), Positives = 253/656 (38%), Gaps = 105/656 (16%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGS-LE---FARQLFDKMVDKDAVSWSTMIRNYGRNGLLDE 75
+GF DV ++II + G LE R++ + V + V+++T++ + + +
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
AL L M V + + ++ + DL+ + ++ + V T+L
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV--PNVVTYTAL 370
Query: 136 IDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGV 191
+D K +L+ A + S+ V++++MI GY+ L E + L KM + V
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 192 IPNEITI----------------LSLVKECGTVEALEFGKLLHAFT-------------- 221
+PN T + L KE + E +L A
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 222 -----LRNGITISVVLATAFIDMYGKCGDFR----------------------------- 247
+ G+T+ + T+ ID++ K GD
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 248 -----SARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEIT 298
A + + + K D+ + M+++ + + + ++ +M CGI+P+ ++
Sbjct: 551 KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMS 610
Query: 299 MVSLLVLCAKAGSLE---------MGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
++ + + G +E M IH + I DT K D K +
Sbjct: 611 CNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLL 670
Query: 350 TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
+Y + R + +N +I+ LG + A + +MEA+G IP+ +TF +
Sbjct: 671 SYGI---KLSRQV--YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMP---MRPNNV 466
+++ + M+ + G+ P V Y ++ LS AGL+ E K + +M MRP++
Sbjct: 726 GSHVRKALSTYSVMM-EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF 784
Query: 467 VLGSLLAACKLHKNVKLGEWAAGQFLS--LESHKCGYNVLMSNIYAAENKWGDVSDIRRA 524
+L++ N+K + ++ L YNVL+S +A K ++ +
Sbjct: 785 TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE-FANVGKMLQARELLKE 843
Query: 525 MRDAGISKEPGVSSIEVNGSVHEFIMGDRE-HPETRRIYEIVAEMREKLDNVGYTP 579
M G+S ++G D E + + + E ++E ++ GY P
Sbjct: 844 MGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 221/497 (44%), Gaps = 32/497 (6%)
Query: 23 HRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALD 78
HR F N+++ ++G ++FA + M + D +S++++I + RNG + A
Sbjct: 55 HRSSF--NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 79 LLRDMRVAR---VKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
+L +R + KP ++ S+ + F+++ K+ + Y+ C V ++
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKM---KMLDEVFVYMGVMLKCCSPNVVTYSTW 169
Query: 136 IDMYVKCKNLAYARSVF-----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
ID + K L A F D S ++V++T +I GY +L + L+ +MRR
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALS-PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 191 VIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSAR 250
+ N +T +L+ ++ + +++ + + + + ++ T ID + + GD +A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 251 YVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
+ N+ D+ +IS + E +I M + P+ + +++
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWN 366
K+G ++ ++ + ++G + D ++++D AK G + F D+ M+
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-MYT 407
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
V+I GD LF ++ G++P+ + + G L + +L +MV +
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM---PMRPNNVVLGSLLAACKLHKNVKL 483
GL+ + Y ++ L+ GL+ EA+++ +M + P++ V L+ A + K
Sbjct: 468 -GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE-----KE 521
Query: 484 GEWAAGQFLSLESHKCG 500
G AA L L+ + G
Sbjct: 522 GNMAAASDLLLDMQRRG 538
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/556 (19%), Positives = 232/556 (41%), Gaps = 42/556 (7%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLF----------DKMVDKDAVSWSTMIRNYGRN 70
G D ++ MY + + A + F D V + +++TMI YG++
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 311
Query: 71 GLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVP 130
G + EA + + M + P+ + ++IH++ + +LG+ +C
Sbjct: 312 GQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN--NGQLGEVTSLMKTMKLHCAPDTRT 369
Query: 131 LSTSLIDMYVKCKNL----AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
+ LI ++ K ++ AY + + D VS+ T++ + + + E L +M
Sbjct: 370 YNI-LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 187 RREGVIPNEITILSLVKECGTVEALE----FGKLLHAFTLRNGITISVVLATAFIDMYGK 242
+ V +E T +L + E LE + K H +S +A ID YG+
Sbjct: 429 DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV-----AGNMSSEGYSANIDAYGE 483
Query: 243 CGDFRSARYVF---DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
G A VF + + ++ + MI AY + ++ ++F M G+ P++ T
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 300 VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAAT- 358
+L+ + A A G+ + + G D +++ + K G ++ ++
Sbjct: 544 NTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 359 ---DRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQE 415
+ D++++ V+I+ A G+ + A+ M+ G+ N + + +K + G L E
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 416 GKRLFHKMVHDFGLV--PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLA 473
+ ++ K++ P V CM++L S ++ +A+ + M R +
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMM 723
Query: 474 ACKLHKNVKLGEWA--AGQFLSLE--SHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAG 529
C KN + E A Q ++ + YN ++ ++A + ++ + + + M +G
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL-GLFALDGRFKEAVETFKEMVSSG 782
Query: 530 ISKEPGVSSIEVNGSV 545
I +P S+ + G++
Sbjct: 783 I--QPDDSTFKSLGTI 796
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 140/351 (39%), Gaps = 30/351 (8%)
Query: 17 CCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGL 72
CC+ R V N +I YG S E A +LF+ M V D +++T+++ +
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
+ L MR I ++I F +L L + + ++ ++ + V +
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNI--EPDVVVY 613
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
LI+ + N+ A S + A I V + ++I Y L+E ++ K+ +
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 189 ---EGVIPNEIT---ILSLVKECGTVEALEFGKLLHAFTLR---NGITISVVLATAFIDM 239
+ P+ T +++L E V E + + R N T +++L M
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAE--AIFDSMKQRGEANEFTFAMMLC-----M 726
Query: 240 YGKCGDFRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
Y K G F A + + D + ++++ +A E + F +M GI+P+
Sbjct: 727 YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Query: 296 EITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGD 346
+ T SL + K G + I K+ IKR +L S + GD
Sbjct: 787 DSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 205/477 (42%), Gaps = 45/477 (9%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGLLDEA 76
G+ D + ++ + G + A L D+MV+ D V+ ST+I G + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
L L+ M +P E+ +++ + + L L M RN S V S +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKMEERNIKASVVQYSI-VI 252
Query: 137 DMYVKCKNLAYARSVFDGFS----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
D K + A S+F+ A +V+++++I G + ++G ++ +M +I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 193 PNEITILSL----VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
P+ +T +L VKE +EA E L+ + GI + + ID + K
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKE----LYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 249 ARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
A +FD + +K D++ S +I++Y + +D+ +F +++ G+ PN IT +L++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILM 364
++G L K + + +G+ L+D G+++ +F + +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 365 ----WNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
+N++I G + A LF + +GV P+ +T+ + G L E LF
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 421 HKMVHDFGLVPKVEHYGCMV-------DLLSRAGLLDEAQ-----------KLIIDM 459
KM D G P Y ++ L+S L++E + K++IDM
Sbjct: 549 RKMKED-GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 200/448 (44%), Gaps = 37/448 (8%)
Query: 160 IVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT----ILSLVKECGTVEALEFGK 215
+V+ +T+I G ++E + L +M G P+E+T + L K + AL+
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD--- 231
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAY 271
L RN I SVV + ID K G F A +F+ +E K D++ S++I
Sbjct: 232 LFRKMEERN-IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
D+ + +M I P+ +T +L+ + K G L K +++ + +GI DT
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 332 KLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
SL+D + K + ++F + + DI+ ++++I+ + + LF E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
+ ++G+IPN IT+ + SG L K LF +MV G+ P V YG ++D L G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNG 469
Query: 448 LLDEAQKLIIDMPMRPNNVVLGSLLAACKLHK--NVKLGEWAAGQFLSLESHKCGYNVLM 505
L++A L I M+ + + LG + +H N + A F SL +V+
Sbjct: 470 ELNKA--LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 506 SNIY-AAENKWGDVSD---IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRI 561
N+ K G +S+ + R M++ G + + +I + R H +
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI-----------RAHLGGSGL 576
Query: 562 YEIVAEMREKLDNVGYTPDISAVLMNID 589
V E+ E++ G++ D S + M ID
Sbjct: 577 ISSV-ELIEEMKVCGFSADSSTIKMVID 603
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
+I +Y + N ++E ++F QM + G +P+ +T +L+ + AKAG L++ ++ + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAAL 382
+ DT + +++ K G + ++LF D+ +++ +N+M+ A + + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+L+ +M+ G P+ +T+ ++ H G L+E + +F +M +P YG +VDL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDL 583
Query: 443 LSRAGLLDEAQKL---IIDMPMRPNNVVLGSLLAA 474
+AG +++A + ++ +RPN SLL+
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 142/314 (45%), Gaps = 23/314 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
+ GF D ++ G +L D+MV + V+++ +I +YGR L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EA+++ M+ A KP + ++I + A+ L + ++ R + G S + S
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY---QRMQAGGLSPDTFTYS 473
Query: 135 -LIDMYVKCKNLAYARSVF----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+I+ K +L A +F D ++V++ M+ + N ++L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 GVIPNEIT---ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
G P+++T ++ ++ CG +E E + +N I V +D++GK G+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIPDEPVYGL-LVDLWGKAGNV 590
Query: 247 RSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
A + ++ + ++ C++++S + + N I E +++ M G+RP+ T L
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Query: 303 LVLCAKAGS-LEMG 315
L C S L+MG
Sbjct: 651 LSCCTDGRSKLDMG 664
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+ V++ +I Y N LNE + +F +M+ G P+ +T +L+ L+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF----DSIENKDLMICSAMISAYAQ 273
+ G++ + I+ GK G +A +F D +L+ + M+ +A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
++ M + G P+++T ++ + G LE + + + + ++ D +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 334 KTSLVDMYAKCGDIDTTYRLFA----AATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
LVD++ K G+++ ++ + A ++ N ++S + A EL M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 390 AQGVIPNDITFIGALKACS 408
A G+ P+ T+ L C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
Q I+++ D V+ G +PN +T L+ +A L + + + + G K D
Sbjct: 379 QFGAINKLLDEMVRD---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 333 LKTSLVDMYAKCGDIDTT----YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+L+D++AK G +D R+ A D ++V+I+ G AA +LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
QG PN +T+ + + + Q +L+ M + G P Y ++++L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 449 LDEAQKLIIDMPMR---PNNVVLGSLL 472
L+EA+ + +M + P+ V G L+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLV 581
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
+I +Y + N ++E ++F QM + G +P+ +T +L+ + AKAG L++ ++ + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAAL 382
+ DT + +++ K G + ++LF D+ +++ +N+M+ A + + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+L+ +M+ G P+ +T+ ++ H G L+E + +F +M +P YG +VDL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDL 583
Query: 443 LSRAGLLDEAQKL---IIDMPMRPNNVVLGSLLAA 474
+AG +++A + ++ +RPN SLL+
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 142/314 (45%), Gaps = 23/314 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
+ GF D ++ G +L D+MV + V+++ +I +YGR L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EA+++ M+ A KP + ++I + A+ L + ++ R + G S + S
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY---QRMQAGGLSPDTFTYS 473
Query: 135 -LIDMYVKCKNLAYARSVF----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+I+ K +L A +F D ++V++ M+ + N ++L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 GVIPNEIT---ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
G P+++T ++ ++ CG +E E + +N I V +D++GK G+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIPDEPVYGL-LVDLWGKAGNV 590
Query: 247 RSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
A + ++ + ++ C++++S + + N I E +++ M G+RP+ T L
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Query: 303 LVLCAKAGS-LEMG 315
L C S L+MG
Sbjct: 651 LSCCTDGRSKLDMG 664
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+ V++ +I Y N LNE + +F +M+ G P+ +T +L+ L+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF----DSIENKDLMICSAMISAYAQ 273
+ G++ + I+ GK G +A +F D +L+ + M+ +A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
++ M + G P+++T ++ + G LE + + + + ++ D +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 334 KTSLVDMYAKCGDIDTTYRLFA----AATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
LVD++ K G+++ ++ + A ++ N ++S + A EL M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 390 AQGVIPNDITFIGALKACS 408
A G+ P+ T+ L C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
Q I+++ D V+ G +PN +T L+ +A L + + + + G K D
Sbjct: 379 QFGAINKLLDEMVRD---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 333 LKTSLVDMYAKCGDIDTT----YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+L+D++AK G +D R+ A D ++V+I+ G AA +LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
QG PN +T+ + + + Q +L+ M + G P Y ++++L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 449 LDEAQKLIIDMPMR---PNNVVLGSLL 472
L+EA+ + +M + P+ V G L+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLV 581
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
+I +Y + N ++E ++F QM + G +P+ +T +L+ + AKAG L++ ++ + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAAL 382
+ DT + +++ K G + ++LF D+ +++ +N+M+ A + + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
+L+ +M+ G P+ +T+ ++ H G L+E + +F +M +P YG +VDL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDL 583
Query: 443 LSRAGLLDEA---QKLIIDMPMRPNNVVLGSLLAA 474
+AG +++A + ++ +RPN SLL+
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 142/314 (45%), Gaps = 23/314 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
+ GF D ++ G +L D+MV + V+++ +I +YGR L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EA+++ M+ A KP + ++I + A+ L + ++ R + G S + S
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY---QRMQAGGLSPDTFTYS 473
Query: 135 -LIDMYVKCKNLAYARSVF----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+I+ K +L A +F D ++V++ M+ + N ++L+ M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 190 GVIPNEIT---ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
G P+++T ++ ++ CG +E E + +N I V +D++GK G+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIPDEPVYGL-LVDLWGKAGNV 590
Query: 247 RSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
A + ++ + ++ C++++S + + N I E +++ M G+RP+ T L
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Query: 303 LVLCAKAGS-LEMG 315
L C S L+MG
Sbjct: 651 LSCCTDGRSKLDMG 664
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
+ V++ +I Y N LNE + +F +M+ G P+ +T +L+ L+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 218 HAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF----DSIENKDLMICSAMISAYAQ 273
+ G++ + I+ GK G +A +F D +L+ + M+ +A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 274 TNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKL 333
++ M + G P+++T ++ + G LE + + + + ++ D +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 334 KTSLVDMYAKCGDIDTTYRLFA----AATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
LVD++ K G+++ ++ + A ++ N ++S + A EL M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 390 AQGVIPNDITFIGALKACS 408
A G+ P+ T+ L C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
Q I+++ D V+ G +PN +T L+ +A L + + + + G K D
Sbjct: 379 QFGAINKLLDEMVRD---GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 333 LKTSLVDMYAKCGDIDTT----YRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM 388
+L+D++AK G +D R+ A D ++V+I+ G AA +LF EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGL 448
QG PN +T+ + + + Q +L+ M + G P Y ++++L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 449 LDEAQKLIIDMPMR---PNNVVLGSLL 472
L+EA+ + +M + P+ V G L+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLV 581
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 30 NAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA----LDLLRDMRV 85
N +++M+ G L+ RQ+FD+M +D SW+ + G ++A + +L+ +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 86 ARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNL 145
K + ++ A + D +LGK +H + + LS SLI Y + + L
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 146 AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKEC 205
A V S A+ V+W + E IR F++M G+ N +++K C
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 206 GTV-EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENKDLMIC 264
V + G+ +HA ++ G ++ I+MYGK G + A VF S +++ + C
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 265 -SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
+AM+++Y Q E + QM GI+ ++ +
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLL 402
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 10/272 (3%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV--- 191
L+ M+V C L R +FD SW + G I + + LFV M +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 192 --IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITIS--VVLATAFIDMYGKCGDFR 247
IP+ I + ++K C + E GK +HA + G L+ + I YG+
Sbjct: 189 FKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLE 247
Query: 248 SARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
A V + N + + +A ++ + EV F++M + GI+ N ++L C+
Sbjct: 248 DANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Query: 308 -KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR-DILMW 365
+ G+ +H+ K G + D ++ L++MY K G + ++F ++ D + W
Sbjct: 308 WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 366 NVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
N M++ G A++L +M+A G+ +D
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 16/239 (6%)
Query: 282 DIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMY 341
DI M+ + NE L A+ + +I K I+ L+ M+
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 342 AKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEM---EAQGVIPNDI 398
CG +D T ++F RD W ++ GC +GD E A LFV M +G
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 399 TFIG-ALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHY--GCMVDLLSRAGLLDEAQKL 455
+G LKAC+ + GK++ H + H G + + + Y G ++ L++A L
Sbjct: 194 WILGCVLKACAMIRDFELGKQV-HALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDAN-L 251
Query: 456 IIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAA--GQFLSLESHKCGYNV-LMSNIYAA 511
++ N V A K+ + + GE+ F+ + +H NV + SN+ A
Sbjct: 252 VLHQLSNANTVAW-----AAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 16 FCCENGF--HRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWSTMIRNYGRNGLL 73
C + GF D ++ ++I YGE LE A + ++ + + V+W+ + N R G
Sbjct: 218 LCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEF 277
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVD-LKLGKALHGYVMRNRNCG-QSGVPL 131
E + +M +K + +++ + + D + G+ +H ++ G +S +
Sbjct: 278 QEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIK---LGFESDCLI 334
Query: 132 STSLIDMYVKCKNLAYARSVFDGFSGASIVS-WTTMIAGYIHTNNLNEGIRLFVKMRREG 190
LI+MY K + A VF + VS W M+A Y+ E I+L +M+ G
Sbjct: 335 RCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATG 394
Query: 191 V 191
+
Sbjct: 395 I 395
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 6/221 (2%)
Query: 194 NEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVF 253
NE L KE L +++ I ++ + M+ CG R +F
Sbjct: 87 NEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMF 146
Query: 254 DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQM----NDCGIRPNEITMVSLLVLCAKA 309
D + ++D + + + ++ +FV M + + +L CA
Sbjct: 147 DRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMI 206
Query: 310 GSLEMGKWIHSYIDKQGI--KRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNV 367
E+GK +H+ K G + D+ L SL+ Y + ++ + ++ + + W
Sbjct: 207 RDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAA 266
Query: 368 MISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS 408
++ G+ + + F+EM G+ N F LKACS
Sbjct: 267 KVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 216/497 (43%), Gaps = 52/497 (10%)
Query: 57 AVSWSTMIRNYGRNGLL----DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKL-- 110
+S+ RN LL DEA+DL +M +R PS + ++ A++ L
Sbjct: 26 GLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVI 85
Query: 111 -----------GKALHGY-VMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGA 158
L+ Y +M N C +S + + +++ +K L Y G
Sbjct: 86 SFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK---LGY---------GP 133
Query: 159 SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVE---ALEFGK 215
SIV+ +++ G+ H N ++E + L +M G P+ +T +LV G + A E
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH--GLFQHNKASEAVA 191
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN----KDLMICSAMISAY 271
L+ ++ G +V A I+ K G+ A + + +E D++I S +I +
Sbjct: 192 LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
+ +D+ ++F +M++ GIRP+ T SL+ G + S + ++ I +
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 332 KLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
SL+D +AK G + +LF + D +I+ +N +I+G M + A ++F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG 447
M ++ +P+ +T+ + + + +G LF M GLV Y ++ +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQAS 429
Query: 448 LLDEAQ---KLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVL 504
D AQ K ++ + PN + +LL L KN KL E A F L+ K ++
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDG--LCKNGKL-EKAMVVFEYLQKSKMEPDIY 486
Query: 505 MSNIYA-AENKWGDVSD 520
NI + K G V D
Sbjct: 487 TYNIMSEGMCKAGKVED 503
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 172/450 (38%), Gaps = 79/450 (17%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEA 76
G D+ A+I + G + A L +KM ++ D V +ST+I + + +D+A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 77 LDLLRDMRVARVKPSEI---AMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
L+L +M ++P ++IS + + D + L + R N V
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA--SRLLSDMLERKIN---PNVVTFN 314
Query: 134 SLIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
SLID + K L A +FD SI V++ ++I G+ + L+E ++F M +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 190 GVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSA 249
+P+ +T +L+ + + G L R G+ + V T I + + D +A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 250 RYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKA 309
+ VF QM G+ PN +T +LL K
Sbjct: 435 QMVFK-------------------------------QMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 310 GSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDILMWNVMI 369
G LE + Y+ K + + DI +N+M
Sbjct: 464 GKLEKAMVVFEYLQK-------------------------------SKMEPDIYTYNIMS 492
Query: 370 SGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGL 429
G G E +LF + +GV P+ I + + GL +E LF KM D G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GP 551
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+P Y ++ R G + +LI +M
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 17/278 (6%)
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+++++ + N I E + QM + G +P+ +T +L+ + + +
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 325 QGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEA 380
+G + D ++++ K G+ D L + D+++++ +I +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
AL LF EM+ +G+ P+ T+ + + G + RL M+ + + P V + ++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLI 317
Query: 441 DLLSRAGLLDEAQKLIIDMPMR---PNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESH 497
D ++ G L EA+KL +M R PN V SL+ +H + + A F + S
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL---DEAQQIFTLMVSK 374
Query: 498 KC-----GYNVLMSNIYAAENKWGDVSDIRRAMRDAGI 530
C YN L+ N + K D ++ R M G+
Sbjct: 375 DCLPDVVTYNTLI-NGFCKAKKVVDGMELFRDMSRRGL 411
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 203/459 (44%), Gaps = 27/459 (5%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGLLDEA 76
G+ D+ N+++ + + A L +MV+ D+ +++T+I R+ EA
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
+ L+ M V +P + +++ + D+ L +L + + + + GV + ++I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI--EPGVVIYNTII 263
Query: 137 DMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
D KN+ A ++F ++V++ ++I + ++ RL M +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 193 PNEITILSL----VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
PN +T +L VKE VEA + L+ ++ I + ++ I+ +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEA----EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 249 ARYVFDSIENKD----LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
A+++F+ + +KD ++ + +I + + +DE ++F +M+ G+ N +T +L+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA----AATDR 360
+A + + + + G+ D + L+D G ++T +F + +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
DI +N+MI G G E +LF + +GV PN +T+ + GL +E LF
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
+M + G +P Y ++ R G + +LI +M
Sbjct: 560 REMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 260 DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIH 319
D++ +++++ + N I + + QM + G +P+ T +L+ + +
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 320 SYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAML 375
+ +G + D +V+ K GDID L + ++++N +I
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 376 GDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEH 435
+ AL LF EM+ +G+ PN +T+ ++ + G + RL M+ + P V
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVT 328
Query: 436 YGCMVDLLSRAGLLDEAQKLIIDMPMR---PNNVVLGSLLAACKLHKNVKLGEWAAGQFL 492
+ ++D + G L EA+KL +M R P+ SL+ +H + + A F
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL---DEAKHMFE 385
Query: 493 SLESHKCGYNVLMSN 507
+ S C NV+ N
Sbjct: 386 LMISKDCFPNVVTYN 400
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 190/428 (44%), Gaps = 41/428 (9%)
Query: 59 SWSTMIRNYGRNGL----LDEALDLLRDMRVARVKPSEIAMISIIHVFAEL----VDLKL 110
S S R RNGL LD+A+ L M +R PS + ++ A++ V + L
Sbjct: 48 SGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISL 107
Query: 111 GKAL------HGY----VMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI 160
G+ + HG ++ N C +S + L+ +L+ +K L Y SI
Sbjct: 108 GEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK---LGYE---------PSI 155
Query: 161 VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAF 220
V+ ++++ GY H +++ + L +M G P+ IT +L+ L
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 221 TLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMISAYAQTNC 276
++ G ++V ++ K GD A + + +E D++I + +I + +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 277 IDEVFDIFVQMNDCGIRPNEITMVSLL-VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
+D+ ++F +M GIRPN +T SL+ LC+ + + + I+K+ I +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFN 334
Query: 336 SLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
+L+D + K G +L+ + D DI +N +++G M + A ++F M ++
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
P+ +T+ +K S +++G LF +M H GLV Y ++ L G D
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 452 AQKLIIDM 459
AQK+ M
Sbjct: 454 AQKVFKQM 461
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 191/494 (38%), Gaps = 72/494 (14%)
Query: 26 VFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEALDLLR 81
++ N +I + + A L KM+ + V+ S+++ Y + +A+ L+
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 82 DMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV---------MRNRNCGQSGVPLS 132
M +P I ++IH G LH M R C Q +
Sbjct: 180 QMVEMGYRPDTITFTTLIH----------GLFLHNKASEAVALVDRMVQRGC-QPNLVTY 228
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
+++ K + A ++ + A I V + T+I ++++ + LF +M
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
+G+ PN +T SL+ + L + + I ++V A ID + K G F
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 249 ARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
A ++D + + D+ +++++ + + +D+ +F M P+ +T +L+
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDR 360
K+ +E G + + +G+ DT T+L+ GD D ++F +
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 361 DILMWNVMISGCAMLGDGEAALE-----------------------------------LF 385
DI+ +++++ G G E ALE LF
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSR 445
+ +GV PN +T+ + LLQE L KM D G +P Y ++ R
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPNSGTYNTLIRAHLR 587
Query: 446 AGLLDEAQKLIIDM 459
G + +LI +M
Sbjct: 588 DGDKAASAELIREM 601
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/489 (20%), Positives = 195/489 (39%), Gaps = 46/489 (9%)
Query: 121 NRNCGQSGVP-LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
+RN G P ++ S ID+ C Y F SG + ++ +H L++
Sbjct: 18 HRNLQGKGNPRIAPSSIDLCGMC----YWGRAFSSGSG----DYREILRNGLHDMKLDDA 69
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTVEALE----FGKLLHAFTLRNGITISVVLATA 235
I LF M + +P+ + L+ ++ + G+ + + +G+ +L
Sbjct: 70 IGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINC 129
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
F + ++ S++++ Y I + + QM + G RP+
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 296 EITMVSL---LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
IT +L L L KA E + + ++G + + +V+ K GD D
Sbjct: 190 TITFTTLIHGLFLHNKAS--EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 353 LF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS 408
L AA + D++++N +I + AL LF EME +G+ PN +T+ +
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 409 HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNN 465
G + +L M+ + P + + ++D + G EA+KL DM R P+
Sbjct: 307 SYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNI----YAAENKWGDVSDI 521
SL+ +H + + A F + S C +V+ N + + D +++
Sbjct: 366 FTYNSLVNGFCMHDRL---DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 522 RRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDI 581
R M G+ + + + G H+ GD ++ + + ++V++ G PDI
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHD---GDCDNAQ-KVFKQMVSD--------GVPPDI 470
Query: 582 SAVLMNIDG 590
+ +DG
Sbjct: 471 MTYSILLDG 479
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 129/577 (22%), Positives = 243/577 (42%), Gaps = 86/577 (14%)
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
D+A+DL RDM +R P+ I + A+ +L AL M ++ S LS
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ-MESKGIAHSIYTLSI 128
Query: 134 SLIDMYVKCKNLAYARS---------------VFDGFSGA-------------------- 158
+I+ + +C+ L+YA S +F+
Sbjct: 129 -MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 159 ----SIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT---ILSLVKECG-TVEA 210
++++ T++ G +++ + L +M G PNE+T +L+++ + G T A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 211 LEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSA 266
+E LL RN I + V + ID K G +A +F+ +E K D++ +
Sbjct: 248 ME---LLRKMEERN-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
+I + D+ + M I PN +T L+ K G L + + ++G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRL----FAAATDRDILMWNVMISGCAMLGDGEAAL 382
I +T SL+D + K ++ ++ + D DI+ +N++I+G + L
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDL 442
ELF EM +GVI N +T+ ++ SG L+ K+LF +MV + P + Y ++D
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDG 482
Query: 443 LSRAGLLDEA-------QKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLE 495
L G L++A +K +++ + +++ + A K+ W L L+
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD-----AWDLFCSLPLK 537
Query: 496 SHKC---GYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGD 552
K YN+++S + ++ + R M + G + + +I + +GD
Sbjct: 538 GVKLDARAYNIMISEL-CRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH-----LGD 591
Query: 553 REHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
+ AE+ E++ + G+ D+S V M I+
Sbjct: 592 DDAT-------TAAELIEEMKSSGFPADVSTVKMVIN 621
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 190/485 (39%), Gaps = 82/485 (16%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
E G+ V + +I + + G ++ A L D+M +D D V ++ I ++G+ G +D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A ++ +KP E+ S+I V + L + ++ +NR VP +
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR-----VPCT-- 308
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
++ TMI GY +E L + R +G IP+
Sbjct: 309 --------------------------YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 195 EIT---ILSLVKECGTV-EALEF-------------------------GKLLHAFTLRN- 224
I IL+ +++ G V EAL+ GKL AF LR+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 225 ----GITISVVLATAFIDMYGKCGDFRSARYVFDSIENK-----DLMICSAMISAYAQTN 275
G+ +V +D K A +F+ ++ K ++ CS +I +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS-LIDGLGKVG 461
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
+D+ + ++ +M D R N I SL+ G E G I+ + Q D +L
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 336 SLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEAQ 391
+ +D K G+ + +F R D ++++I G G ELF M+ Q
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 392 GVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDE 451
G + + + + G + + +L +M G P V YG ++D L++ LDE
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 452 AQKLI 456
A L
Sbjct: 641 AYMLF 645
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 161/391 (41%), Gaps = 20/391 (5%)
Query: 98 IIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS-TSLIDMYVKCKNLAYARSVFDGFS 156
+I V L D+ +A+ + R P S SL+ + +C+N + S
Sbjct: 68 VIGVLRRLKDV--NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMS 125
Query: 157 ----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALE 212
G S+ + M+ G + N L EG + MR+ P +L+ V +
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 213 FGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMI 268
L G +V L T I + K G SA + D ++ + D+++ + I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIK 328
++ + +D + F ++ G++P+E+T S++ + KA L+ + +++K
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 329 RDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALEL 384
T +++ Y G D Y L A + ++ +N +++ +G + AL++
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 385 FVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLS 444
F EM+ PN T+ + +G L L M GL P V MVD L
Sbjct: 366 FEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGLFPNVRTVNIMVDRLC 423
Query: 445 RAGLLDEAQKLIIDMPMR---PNNVVLGSLL 472
++ LDEA + +M + P+ + SL+
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 178/444 (40%), Gaps = 62/444 (13%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEA 76
G +V N ++ + L+ A +F++M K D +++ ++I G+ G +D+A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV----MRNRNCGQSGVPLS 132
+ M + + + I S+I F G+ G+ M N+NC + L
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNF-----FNHGRKEDGHKIYKDMINQNCSPD-LQLL 520
Query: 133 TSLIDMYVKCKNLAYARSVFDGFSGASIV----SWTTMIAGYIHTNNLNEGIRLFVKMRR 188
+ +D K R++F+ V S++ +I G I NE LF M+
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 189 EGVIPN----EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCG 244
+G + + I I K CG V +LL + G +VV + ID K
Sbjct: 581 QGCVLDTRAYNIVIDGFCK-CGKVNKAY--QLLEEMKTK-GFEPTVVTYGSVIDGLAKID 636
Query: 245 DFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMV 300
A +F+ ++K +++I S++I + + IDE + I ++ G+ PN T
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 301 SLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR 360
SLL KA + + + Q +K KC TY
Sbjct: 697 SLLDALVKAEEIN-----EALVCFQSMKE------------LKCTPNQVTY--------- 730
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
++I+G + A + EM+ QG+ P+ I++ + + +G + E LF
Sbjct: 731 -----GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLS 444
+ + G VP Y M++ LS
Sbjct: 786 DRFKANGG-VPDSACYNAMIEGLS 808
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 34/341 (9%)
Query: 264 CSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYID 323
C M+ + N + E +D+ M RP +L+ + +M + +
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 324 KQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGE 379
+ G + L T+L+ +AK G +D+ L +++ D DI+++NV I +G +
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 380 AALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCM 439
A + F E+EA G+ P+++T+ + + L E +F + + VP Y M
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN-RRVPCTYAYNTM 314
Query: 440 VDLLSRAGLLDEAQKLIIDMPMRPN-------NVVLGSLLAACKLHKNVKLGEWA---AG 489
+ AG DEA L+ + + N +L L K+ + +K+ E A
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 490 QFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFI 549
LS YN+L+ + A K ++R +M+ AG+ P V ++ I
Sbjct: 375 PNLST------YNILIDMLCRA-GKLDTAFELRDSMQKAGLF--PNVRTVN--------I 417
Query: 550 MGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNIDG 590
M DR +++++ E A M E++D TPD IDG
Sbjct: 418 MVDR-LCKSQKLDEACA-MFEEMDYKVCTPDEITFCSLIDG 456
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 191/453 (42%), Gaps = 50/453 (11%)
Query: 41 SLEFARQLFDKMVDKDAVSWSTMIRNYG---RNGL----LDEALDLLRDMRVARVKPSEI 93
+L F+R L D W NY RNGL +EALDL M +R PS I
Sbjct: 21 ALSFSRLL-------DLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73
Query: 94 AMISIIHVFAEL--VDLKLGKALHGYVM------------RNRNCGQSGVPLSTSLIDMY 139
+++V A++ D+ + H +M N C S L++S +
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 140 VKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITIL 199
+K GF IV++T++I G+ N + E + + +M G+ P+ +
Sbjct: 134 MKL-----------GFE-PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 200 SLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK 259
+++ + + L GI VV+ T+ ++ G +R A + + +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 260 ----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMG 315
D++ +A+I A+ + + +++ +M I PN T SL+ G ++
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 316 KWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISG 371
+ + ++ +G D TSL++ + KC +D ++F + + + + + +I G
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 372 CAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDF--GL 429
+G A E+F M ++GV PN T+ L ++G +++ +F M G+
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 430 VPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
P + Y ++ L G L++A + DM R
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 178/464 (38%), Gaps = 99/464 (21%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEA 76
G D++ CN ++ + + A KM+ + D V+++++I + ++EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
+ ++ M +KP V + T++I
Sbjct: 162 MSMVNQMVEMGIKPD-------------------------------------VVMYTTII 184
Query: 137 DMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
D K ++ YA S+FD +V +T+++ G ++ + L M + +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 193 PNEIT----ILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
P+ IT I + VKE ++A E L+ +R I ++ T+ I+ + G
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEE----LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 249 ARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
AR +F +E K D++ +++I+ + + +D+ IF +M+ G+ N IT +L+
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD--- 361
+ G + + + S++ +G+ + + L+ G + +F R+
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 362 ----ILMWNVMISGCAMLGDGEAAL----------------------------------- 382
I +NV++ G G E AL
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 383 ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
LF + ++GV PN +T+ + GL E LF KM D
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 140/332 (42%), Gaps = 17/332 (5%)
Query: 143 KNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV 202
K L+++R + F + ++ ++ +H+ NE + LF M +P+ I L+
Sbjct: 20 KALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79
Query: 203 KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK--- 259
++ +F +++ + +S L T + M C S Y+ S K
Sbjct: 80 NVIAKMK--KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQS--SQPYLASSFLGKMMK 135
Query: 260 -----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEM 314
D++ +++I+ + N ++E + QM + GI+P+ + +++ K G +
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 315 GKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMIS 370
+ ++ GI+ D + TSLV+ G L T R D++ +N +I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 371 GCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLV 430
G A EL+ EM + PN T+ + G + E +++F+ M G
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM-ETKGCF 314
Query: 431 PKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
P V Y +++ + +D+A K+ +M +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 204/485 (42%), Gaps = 40/485 (8%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDE 75
N DVF N +I + E LE A +L ++M V+W +I + + G +DE
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS-TS 134
A+ L++M+ ++ + S+I F + +L GKAL V+ G S ++ +
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER---GDSPCAITYNT 287
Query: 135 LIDMYVKCKNLAYARSVFDGF----SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
LI + K L A +F+ ++ ++T +I G E ++L M +
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 191 VIPNEIT----ILSLVKECGTVEALEFGKLLHAFTLR-NGITISVVLATAFIDMYGKC-- 243
PN +T I L K+ +A+E +L+ R + IT +++L G C
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG-------GLCAK 400
Query: 244 GDFRSARYVF------DSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEI 297
GD A + S + D++ +A+I + N + + DI+ + + + +
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 298 TMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF--- 354
T LL KAG + + I I R++ T+++D + K G ++ L
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 355 -AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
+ + +N ++S G + A LF EM+ P+ ++F + +G +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL---IIDMPMRPNNVVLGS 470
+ + L M GL P + Y +++ + G LDEA ++D P+ + S
Sbjct: 581 KSAESLLVGMSRA-GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 471 LLAAC 475
+L C
Sbjct: 640 VLKYC 644
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 181/428 (42%), Gaps = 40/428 (9%)
Query: 63 MIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH-GYVMRN 121
+++ RN +A+ LLR+MR + P + ++I F E +L+ KAL M+
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE--KALELANEMKG 205
Query: 122 RNCGQSGVPLSTSLIDMYVKCKNLAYARSVFD--GFSG--ASIVSWTTMIAGYIHTNNLN 177
C S V LID + K + A F G A +V +T++I G+ L+
Sbjct: 206 SGCSWSLVTWGI-LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 178 EGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFI 237
G LF ++ G P IT +L++ + L+ + F + G+ +V T I
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 238 DMYGKCGDFRSARYVFDSIENKD----LMICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
D G + A + + + KD + + +I+ + + + +I M R
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 294 PNEITMVSLL-VLCAKAGSLEMGKWIH------SYIDK---------QGIKRDTKLKTSL 337
P+ IT LL LCAK E K ++ SY D G+ ++ +L +L
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 338 VDMYAKCGDIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPND 397
D+Y D A D + N++++ GD A+EL+ ++ ++ N
Sbjct: 445 -DIY------DLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 398 ITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLII 457
T+ + +G+L K L KM L P V Y C++ L + G LD+A +L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 458 DMPMRPNN 465
+M R NN
Sbjct: 554 EMQ-RDNN 560
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 154/395 (38%), Gaps = 50/395 (12%)
Query: 16 FCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKD----AVSWSTMIRNYGRNG 71
F E G +V+ +I VG + A QL + M++KD AV+++ +I ++G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 72 LLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKAL----------------- 114
L+ +A++++ M+ R +P I ++ DL L
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 115 -----HGYVMRNR-------------NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS 156
HG NR G + L++ +K ++ A ++ S
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 157 GASIV----SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALE 212
+ IV ++T MI G+ T LN L KMR + P+ L+ +L+
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 213 FGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMI 268
L R+ VV ID K GD +SA + + + DL S +I
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 269 SAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLE-MGKWIHSYIDKQGI 327
+ + + +DE F +M D G P+ S+L C G + + + + +DK I
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD-I 665
Query: 328 KRDTKLKTSLVD-MYAKCGDIDTTYRLFAAATDRD 361
D +L +++D M ++D RL D++
Sbjct: 666 VLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKE 700
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 179/437 (40%), Gaps = 50/437 (11%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKD----AVSWSTMIRNYGRNGLLDEA 76
G D+ V ++I + + G L+ + LFD+++++ A++++T+IR + + G L EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFA---------ELVDLKLGK-----ALHGYVMRNR 122
++ M V+P+ +I +L++L + K A+ ++ N+
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 123 NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
C V + ++++ K R+ D +++ ++ G +L+E +L
Sbjct: 362 LCKDGLVADAVEIVELMKK------RRTRPDN------ITYNILLGGLCAKGDLDEASKL 409
Query: 183 FVKMRREG------VIPNEITILSLVKECGTVEALE-FGKLLHAFTLRNGITISVVLATA 235
M ++ VI I L KE +AL+ + L+ + +T +++L +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 236 FIDMYGKCGDFRSARYVFDSIENKDLM----ICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
K GD A ++ I + ++ +AMI + +T ++ + +M
Sbjct: 470 L-----KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
++P+ LL K GSL+ + + + D ++D K GDI +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 352 RLFA----AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKAC 407
L A D+ ++ +I+ LG + A+ F +M G P+ LK C
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 408 SHSGLLQEGKRLFHKMV 424
G + L K+V
Sbjct: 645 ISQGETDKLTELVKKLV 661
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 214/502 (42%), Gaps = 44/502 (8%)
Query: 60 WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD--LKLG--KALH 115
++T++ + R GL+DE + +M +V P+ I+ + ++V+ KLG + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN-------IYTYNKMVNGYCKLGNVEEAN 238
Query: 116 GYVMRNRNCGQSGVPLS-TSLIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGY 170
YV + G + TSLI Y + K+L A VF+ V++T +I G
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE-CGTVEALEFGKLLHAFTLRNGITIS 229
++E + LFVKM+ + P T L+K CG+ E L+ GI +
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME-ETGIKPN 357
Query: 230 VVLATAFIDMYGKCGDFRSARYVFDSIENKDLM----ICSAMISAYAQTNCIDEVFDIFV 285
+ T ID F AR + + K LM +A+I+ Y + I++ D+
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 286 QMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M + PN T L+ K+ + ++ ++++ + D SL+D + G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSG 476
Query: 346 DIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFI 401
+ D+ YRL + DR D + MI E A +LF +E +GV PN + +
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 402 GALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKL---IID 458
+ +G + E + KM+ +P + ++ L G L EA L ++
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 459 MPMRPNNVVLGSLLAACKLHKNVKLGEW--AAGQFLSLESHKCG-----YNVLMSNIYAA 511
+ ++P V ++L +H+ +K G++ A +F + S Y + Y
Sbjct: 596 IGLQPT-VSTDTIL----IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT-YCR 649
Query: 512 ENKWGDVSDIRRAMRDAGISKE 533
E + D D+ MR+ G+S +
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPD 671
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 205/470 (43%), Gaps = 34/470 (7%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLD 74
E+ +++ N ++ Y ++G++E A Q K+V D D +++++I Y + LD
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV-MRNRNCG---QSGVP 130
A + +M + + +E+A +IH V ++ +A+ +V M++ C ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLC--VARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 131 LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREG 190
L SL K + L + + + +I ++T +I + L +M +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 191 VIPNEITILSLVK---ECGTVE-ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
++PN IT +L+ + G +E A++ +L+ + L + + I Y K
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL----SPNTRTYNELIKGYCKSNVH 444
Query: 247 RSARYVFDSIENK---DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL 303
++ + +E K D++ +++I ++ D + + MND G+ P++ T S++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 304 VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI- 362
K+ +E + ++++G+ + + T+L+D Y K G +D + + ++
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 363 ---LMWNVMISG-CAMLGDGEAAL--ELFVEMEAQGVIPNDITFIGALKACSHSGLLQEG 416
L +N +I G CA EA L E V++ Q + D I L G
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL---LKDGDFDHA 621
Query: 417 KRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNV 466
F +M+ G P Y + R G L +A+ ++ MR N V
Sbjct: 622 YSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAK--MRENGV 668
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 123/611 (20%), Positives = 230/611 (37%), Gaps = 124/611 (20%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
E G D F ++IM Y + L+ A ++F++M ++ V+++ +I +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 75 EALDLLRDMRVARVKPSEIAMISII-------------HVFAELVDLKLGKALHGY-VMR 120
EA+DL M+ P+ +I ++ E+ + + +H Y V+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 121 NRNCGQSGVPLSTSLIDMYVK---CKNLAYARSVFDGFSGASIV---------------- 161
+ C Q + L+ ++ N+ ++ +G+ ++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 162 ----SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLL 217
++ +I GY + N+++ + + KM V+P+ +T SL+ G + F
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLID--GQCRSGNFDSAY 482
Query: 218 HAFTLRN--GITISVVLATAFIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMISAY 271
+L N G+ T+ ID K A +FDS+E N ++++ +A+I Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV-LCAKAGSLEMGKWIHSYIDKQGIKRD 330
+ +DE + +M PN +T +L+ LCA G L+ + + K G++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD-GKLKEATLLEEKMVKIGLQPT 601
Query: 331 TKLKTSLVDMYAKCGDIDTTYRLFAA---------------------------------- 356
T L+ K GD D Y F
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 357 -----ATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK------ 405
D+ ++ +I G LG A ++ M G P+ TF+ +K
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 406 ----------ACSHSGLLQEGK--RLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ 453
C+ S +++ L KMV + + P + Y ++ + G L A+
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMV-EHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 454 KLIIDMP----MRPNNVVLGSLLA-ACKLHKNVKLGE-----WAAGQFLSLESHKCGYNV 503
K+ M + P+ +V +LL+ CKL K+ + + G LES K V
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK----V 836
Query: 504 LMSNIYAAENK 514
L+ +Y K
Sbjct: 837 LICGLYKKGEK 847
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 145/371 (39%), Gaps = 41/371 (11%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKD----AVSWSTMIRNYGRNGLLD 74
+ G + +V + A+I Y + G ++ A + +KM+ K+ +++++ +I +G L
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS-- 132
EA L M ++P+ +IH LK G H Y + P +
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRL-----LKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 133 -TSLIDMYVKCKNLAYARSVF-----DGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
T+ I Y + L A + +G S + +++++I GY N + +M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVS-PDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 187 RREGVIPNEITILSLVKE----------------CGTVEALEFGKLLHAFT--LRNGITI 228
R G P++ T LSL+K C +EF ++ + + +T
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 229 SVVLATAFIDMYGKCGDFRSARYVFDSIENKD-----LMICSAMISAYAQTNCIDEVFDI 283
+ I + G+ R A VFD ++ + ++ +A++S + +E +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 284 FVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAK 343
M G P + L+ K G E G + + + G D ++D K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 344 CGDIDTTYRLF 354
G ++ Y LF
Sbjct: 879 QGLVEAFYELF 889
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 174/396 (43%), Gaps = 18/396 (4%)
Query: 42 LEFARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHV 101
LE R++ D V S + ++ R G ++++ L+++ V +KP +II+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 102 FAELVDLKLGKALHGY--VMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGAS 159
+ + D + G VM+ + V T L+++ VK ++ A +FD
Sbjct: 269 YVKQRDF---SGVEGVLKVMKKDGVVYNKVTY-TLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 160 IVS----WTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
I S +T++I+ N+ LF ++ +G+ P+ T +L+ V + +
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 216 LLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAY 271
+L G+ I+ V+ ID Y + G A ++D +E K D+ C+ + S +
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 272 AQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDT 331
+ DE +M + G++ + ++ +L+ + K G++E K + + +G++ +
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 332 KLKTSLVDMYAKCGDIDTTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVE 387
++ Y K G I +L A D D + +I G + + + A+ LF E
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 388 MEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
M +G+ N +T+ + S +G E L+ +M
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 141/334 (42%), Gaps = 53/334 (15%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLD 74
E G DV V ++I G+++ A LFD++ +K + ++ +I + G +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAE--LVDLKLGKALHGYVMRNRNCGQSGVPLS 132
A L+ +M+ V +++ ++I + +VD +A Y + + Q+ V
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD----EASMIYDVMEQKGFQADVFTC 437
Query: 133 TSLIDMYVKCKNLAYARS----VFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
++ + + K A+ + +G S VS+T +I Y N+ E RLFV+M
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 189 EGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
+GV PN IT + +++A Y K G +
Sbjct: 498 KGVQPNAIT---------------YNVMIYA--------------------YCKQGKIKE 522
Query: 249 ARYVFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
AR + ++E + D +++I + +DE +F +M G+ N +T ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLV 338
+KAG + ++ + ++G D K+ T+L+
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 239 MYGKCGDFRSARYVFDSIENKDLMI----CSAMISAYAQTNCIDEVFDIFVQMNDCGIRP 294
+Y G F VFD + K L I C + A + ID +IF +M D G++
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVK- 221
Query: 295 NEITMVSLLV----LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
IT+ SL + LC + G +E K + +GIK + ++++ Y K D
Sbjct: 222 --ITVYSLTIVVEGLC-RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 351 YRLFAAATDRDILMWNVMISGCAML-----GDGEAALELFVEMEAQGVIPNDITFIGALK 405
+ +D +++N + M G A +LF EM +G+ + + +
Sbjct: 279 EGVLKVMK-KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNN 465
G ++ LF ++ GL P YG ++D + + G + A+ L+ +M + N
Sbjct: 338 WNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 466 VV 467
+
Sbjct: 397 IT 398
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 26/395 (6%)
Query: 53 VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD----- 107
+ D V+ +I ++ +DEAL++ MR R + IH F L+D
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH-FNTLIDGLCKV 383
Query: 108 --LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS----GASIV 161
LK + L + C + V + LID Y + L A+ V ++V
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNC-LIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+ T++ G + LN + F+ M +EGV N +T ++L+ C +V +E +
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 222 LRNGITISVVLATAFIDMYGKCG---DFRSARYVFDSIE---NKDLMICSAMISAYAQTN 275
L G + + A I G C D + R V E + DL+ + +I + N
Sbjct: 503 LEAGCSPDAKIYYALIS--GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
++V+++ M G +P+ IT +L+ K E + + + + G+
Sbjct: 561 NTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 336 SLVDMYAKCGDIDTTYRLFA-----AATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
+++D Y G++D +LF + + + +++N++I+ + LG+ AL L EM+
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
+ V PN T+ K + + +L +MV
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 147/375 (39%), Gaps = 44/375 (11%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LI+ K + + A VF+ G + A IH N L +G+
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL-------------- 380
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
C E +LL L + V ID Y + G +A+ V
Sbjct: 381 ----------CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 255 SIENKDL----MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
++ ++ + + ++ + + ++ F+ M G++ N +T ++L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC----GDIDTTYRLFAAATDRDILMWN 366
++E + + + + G D K+ +L+ + I +L D+L +N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
++I + E E+ +ME +G P+ IT+ + + +R+ +M D
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM----PMRPNNVVLGSLLAACKLHKNVK 482
GL P V YG ++D G LDEA KL DM + PN V+ L+ A K
Sbjct: 611 -GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS-----K 664
Query: 483 LGEWAAGQFLSLESH 497
LG + GQ LSL+
Sbjct: 665 LGNF--GQALSLKEE 677
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 26/395 (6%)
Query: 53 VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD----- 107
+ D V+ +I ++ +DEAL++ MR R + IH F L+D
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH-FNTLIDGLCKV 383
Query: 108 --LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS----GASIV 161
LK + L + C + V + LID Y + L A+ V ++V
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNC-LIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+ T++ G + LN + F+ M +EGV N +T ++L+ C +V +E +
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 222 LRNGITISVVLATAFIDMYGKCG---DFRSARYVFDSIE---NKDLMICSAMISAYAQTN 275
L G + + A I G C D + R V E + DL+ + +I + N
Sbjct: 503 LEAGCSPDAKIYYALIS--GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
++V+++ M G +P+ IT +L+ K E + + + + G+
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 336 SLVDMYAKCGDIDTTYRLFA-----AATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
+++D Y G++D +LF + + + +++N++I+ + LG+ AL L EM+
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
+ V PN T+ K + + +L +MV
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 147/375 (39%), Gaps = 44/375 (11%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LI+ K + + A VF+ G + A IH N L +G+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL-------------- 380
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
C E +LL L + V ID Y + G +A+ V
Sbjct: 381 ----------CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 255 SIENKDL----MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
++ ++ + + ++ + + ++ F+ M G++ N +T ++L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC----GDIDTTYRLFAAATDRDILMWN 366
++E + + + + G D K+ +L+ + I +L D+L +N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
++I + E E+ +ME +G P+ IT+ + + +R+ +M D
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM----PMRPNNVVLGSLLAACKLHKNVK 482
GL P V YG ++D G LDEA KL DM + PN V+ L+ A K
Sbjct: 611 -GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS-----K 664
Query: 483 LGEWAAGQFLSLESH 497
LG + GQ LSL+
Sbjct: 665 LGNF--GQALSLKEE 677
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 26/395 (6%)
Query: 53 VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD----- 107
+ D V+ +I ++ +DEAL++ MR R + IH F L+D
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH-FNTLIDGLCKV 383
Query: 108 --LKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS----GASIV 161
LK + L + C + V + LID Y + L A+ V ++V
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNC-LIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 162 SWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFT 221
+ T++ G + LN + F+ M +EGV N +T ++L+ C +V +E +
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 222 LRNGITISVVLATAFIDMYGKCG---DFRSARYVFDSIE---NKDLMICSAMISAYAQTN 275
L G + + A I G C D + R V E + DL+ + +I + N
Sbjct: 503 LEAGCSPDAKIYYALIS--GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 276 CIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKT 335
++V+++ M G +P+ IT +L+ K E + + + + G+
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 336 SLVDMYAKCGDIDTTYRLFA-----AATDRDILMWNVMISGCAMLGDGEAALELFVEMEA 390
+++D Y G++D +LF + + + +++N++I+ + LG+ AL L EM+
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 391 QGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVH 425
+ V PN T+ K + + +L +MV
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 147/375 (39%), Gaps = 44/375 (11%)
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
LI+ K + + A VF+ G + A IH N L +G+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL-------------- 380
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
C E +LL L + V ID Y + G +A+ V
Sbjct: 381 ----------CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 255 SIENKDL----MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
++ ++ + + ++ + + ++ F+ M G++ N +T ++L+ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKC----GDIDTTYRLFAAATDRDILMWN 366
++E + + + + G D K+ +L+ + I +L D+L +N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
++I + E E+ +ME +G P+ IT+ + + +R+ +M D
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM----PMRPNNVVLGSLLAACKLHKNVK 482
GL P V YG ++D G LDEA KL DM + PN V+ L+ A K
Sbjct: 611 -GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS-----K 664
Query: 483 LGEWAAGQFLSLESH 497
LG + GQ LSL+
Sbjct: 665 LGNF--GQALSLKEE 677
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 213/512 (41%), Gaps = 57/512 (11%)
Query: 2 LSHTFISARTRGARFCC-----ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFD--KMVD 54
L H + R C E G + + I+ + + G E A FD K +
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH 409
Query: 55 K--DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHV----FAELVDL 108
K +A + +I + + ++ A L+R+M + A I+I H + + D
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID----APIAIYHTMMDGYTMVADE 465
Query: 109 KLGKALHGYVMRNRNCGQSGVPLSTS-LIDMYVK----CKNLAYARSVFDGFSGASIVSW 163
K G + R + CG + ++ LI++Y K K L +R + + ++ ++
Sbjct: 466 KKGLVV---FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY 522
Query: 164 TTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKE-CG---------TVEALEF 213
+ MI G++ + +F M +EG+ P+ I +++ CG TV+ E
Sbjct: 523 SMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK--EM 580
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN----KDLMICSAMIS 269
KL H T R + I I Y K GD R + VFD + + + +I+
Sbjct: 581 QKLRHRPTTRTFMPI--------IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
+ +++ +I +M G+ NE T ++ A G + + +G+
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 330 DTKLKTSLVDMYAKCGDIDT----TYRLFAAATDRDILMWNVMISGCAMLGDGEAALELF 385
D +L+ K G + + T + A R+ ++N++I G A GD A +L
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 386 VEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSR 445
+M+ +GV P+ T+ + ACS +G + + +M G+ P ++ Y ++ +R
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWAR 811
Query: 446 AGLLDEAQKLIIDMP---MRPNNVVLGSLLAA 474
A L ++A +M ++P+ V LL +
Sbjct: 812 ASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/506 (19%), Positives = 206/506 (40%), Gaps = 79/506 (15%)
Query: 32 IIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVAR 87
++ YG G + AR+ F++M + + ++++I Y +DEAL +R M+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 88 VKPSEIAMISIIHVF-----AELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKC 142
++ S + I+ F AE D +A + + N G + Y C
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKR--IHKTLNASIYGKII-------YAHC 425
Query: 143 KNL------AYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
+ A R + + A I + TM+ GY + +G+ +F +++ G P +
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 197 T---ILSLVKECGTV-EALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
T +++L + G + +ALE +++ +++ + ++ F+ K D+ +A V
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV----KLKDWANAFAV 541
Query: 253 FDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAK 308
F+ + + D+++ + +ISA+ +D +M RP T + ++ AK
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 309 AG----SLEM----------------GKWIHSYIDKQ---------------GIKRDTKL 333
+G SLE+ I+ ++K+ G+ +
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 334 KTSLVDMYAKCGDIDTTYRLFA----AATDRDILMWNVMISGCAMLGDGEAALELFVEME 389
T ++ YA GD + F D DI + ++ C G ++AL + EM
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 390 AQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLL 449
A+ + N + + + G + E L +M + G+ P + Y + S+AG +
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAGDM 780
Query: 450 DEAQKLIIDMP---MRPNNVVLGSLL 472
+ A + I +M ++PN +L+
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLI 806
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 27/460 (5%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDE 75
NG +++ N +I + FA + K++ + D +++T+I+ G + E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A+ L+ M +P + SI++ D L L M RN ++ V +++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK-MEERNV-KADVFTYSTI 234
Query: 136 IDMYVKCKNLAYARSVFDGFS----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV 191
ID + + A S+F +S+V++ +++ G N+G L M +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 192 IPNEITILSL----VKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFR 247
+PN IT L VKE EA E L+ + GI+ +++ +D Y
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANE----LYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 248 SARYVFD-SIENK---DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLL 303
A + D + NK D++ +++I Y +D+ +F ++ G+ N +T L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 304 VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATD 359
++G +++ + + + G+ D L+D G ++ +F + D
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 360 RDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRL 419
I+M+ +I G G E A LF + +GV PN +T+ + G L E L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 420 FHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
KM D G P Y ++ R G L + KLI +M
Sbjct: 531 LRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 171/421 (40%), Gaps = 53/421 (12%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
ENG DV N+I+ G A L KM V D ++ST+I + R+G +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
A+ L ++M +K S + S++ K GK G ++ + VP +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC-----KAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 135 ---LIDMYVKCKNLAYARSVFD-----GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKM 186
L+D++VK L A ++ G S +I+++ T++ GY N L+E + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 187 RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
R P+ +T SL+K V+ ++ G + + G+ + V
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY------------- 406
Query: 247 RSARYVFDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLC 306
S ++ + Q+ I ++F +M G+ P+ +T LL
Sbjct: 407 ------------------SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 307 AKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAA----ATDRDI 362
G LE I + K + + T++++ K G ++ + LF + ++
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
+ + VMISG G A L +ME G PND T+ ++A G L +L +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 423 M 423
M
Sbjct: 569 M 569
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 200/475 (42%), Gaps = 37/475 (7%)
Query: 135 LIDMYVKCKNLAYARSVFD-----GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
+I+ + +C +A SV G+ ++ T+I G ++E + L +M
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYE-PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 190 GVIPNEITILSLVKE-CGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRS 248
G P+ +T S+V C + + LL RN + V + ID + G +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDA 246
Query: 249 ARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLV 304
A +F +E K ++ ++++ + ++ + M I PN IT LL
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 305 LCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----AAATDR 360
+ K G L+ ++ + +GI + +L+D Y + +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 361 DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLF 420
DI+ + +I G M+ + +++F + +G++ N +T+ ++ SG ++ + LF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 421 HKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKN 480
+MV G++P V YG ++D L G L++A ++ D ++ + + LG ++ +
Sbjct: 427 QEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFED--LQKSKMDLGIVMYTTIIEGM 483
Query: 481 VKLG--EWAAGQFLSLESHKCGYNVLMSNIY-AAENKWGDVSD---IRRAMRDAGISKEP 534
K G E A F SL NV+ + + K G +S+ + R M + G +
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 535 GVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
+ + + + GD A++ E++ + G++ D S++ M ID
Sbjct: 544 CTYNTLIRAHLRD---GDLTAS---------AKLIEEMKSCGFSADASSIKMVID 586
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 150/371 (40%), Gaps = 53/371 (14%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLD 74
E DVF + II G ++ A LF +M + V++++++R + G +
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALH------------------- 115
+ LL+DM + P+ I ++ VF + L+ L+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 116 -GYVMRNR-------------NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSG---- 157
GY M+NR N + TSLI Y K + VF S
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEIT---ILSLVKECGTVE-ALEF 213
A+ V+++ ++ G+ + + LF +M GV+P+ +T +L + + G +E ALE
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 214 GKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMIS 269
+ L ++ + + +V+ T I+ K G A +F S+ K ++M + MIS
Sbjct: 461 FEDLQ----KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKR 329
+ + E + +M + G PN+ T +L+ + G L + + G
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 330 DTKLKTSLVDM 340
D ++DM
Sbjct: 577 DASSIKMVIDM 587
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 144/351 (41%), Gaps = 27/351 (7%)
Query: 152 FDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI------TILSLVKEC 205
F S ++ + +G + ++ I LF +M R +P+ + + ++ K+
Sbjct: 46 FSSISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 104
Query: 206 GTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIEN----KDL 261
V L+F K L NGI ++ I+ + +C A V + D
Sbjct: 105 NLV--LDFCKQLEL----NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158
Query: 262 MICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSY 321
+ +I + E + +M + G +P+ +T S++ ++G + +
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 322 IDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI----LMWNVMISGCAMLGD 377
++++ +K D ++++D + G ID LF + I + +N ++ G G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
L +M ++ ++PN ITF L G LQE L+ +M+ G+ P + Y
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYN 337
Query: 438 CMVDLLSRAGLLDEAQKLIIDMPMR----PNNVVLGSLLAACKLHKNVKLG 484
++D L EA + +D+ +R P+ V SL+ + K V G
Sbjct: 338 TLMDGYCMQNRLSEANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 205/481 (42%), Gaps = 59/481 (12%)
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
+D+A+DL DM +R PS + ++ A++ +L +L G M+ S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL-GEQMQTLGISHDLYTYS 122
Query: 133 TSLIDMYVKCKNLAYARSVFD-----GFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMR 187
I+ + + L+ A +V G+ IV+ ++++ GY H+ +++ + L +M
Sbjct: 123 I-FINCFCRRSQLSLALAVLAKMMKLGYE-PDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 188 REGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFID--------M 239
G P+ T F L+H L N + +V L +
Sbjct: 181 EMGYKPDTFT---------------FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 240 YG-------KCGDFRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMN 288
YG K GD A + +E D++I + +I + +D+ ++F +M+
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 289 DCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDID 348
+ GIRP+ T SL+ G + S + ++ I + ++L+D + K G +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 349 TTYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
+L+ + D DI ++ +I+G M + A +F M ++ PN +T+ +
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQ---KLIIDMPM 461
K + ++EG LF +M GLV Y ++ +A D AQ K ++ + +
Sbjct: 406 KGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 462 RPN----NVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAA---ENK 514
PN N++L L KL K + + E+ Q ++E YN+++ + A E+
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYL--QRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 515 W 515
W
Sbjct: 523 W 523
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 193/502 (38%), Gaps = 78/502 (15%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEA 76
G D++ + I + L A + KM+ + D V+ S+++ Y + + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV---------MRNRNCGQS 127
+ L+ M KP ++IH G LH M R C
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIH----------GLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 128 GVPLSTSLIDMYVKCKN------LAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIR 181
V T + + CK L+ + + G A +V + T+I G ++++ +
Sbjct: 223 LVTYGTVVNGL---CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 182 LFVKMRREGVIPNEITILSLVK-ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMY 240
LF +M +G+ P+ T SL+ C + +LL R I +VV +A ID +
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAF 338
Query: 241 GKCGDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNE 296
K G A ++D + + D+ S++I+ + + +DE +F M PN
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 297 ITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFA- 355
+T +L+ KA +E G + + ++G+ +T T+L+ + + D D +F
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 356 --------------------------------------AATDRDILMWNVMISGCAMLGD 377
+ + DI +N+MI G G
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 378 GEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYG 437
E ELF + +GV PN I + + G +E L KM D G +P Y
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPLPNSGTYN 577
Query: 438 CMVDLLSRAGLLDEAQKLIIDM 459
++ R G + + +LI +M
Sbjct: 578 TLIRARLRDGDREASAELIKEM 599
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 174/396 (43%), Gaps = 22/396 (5%)
Query: 73 LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLS 132
LD+A+ L DM +R PS + ++ A++ L +L G M+N + S
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYS 114
Query: 133 TSLIDMYVKCKNLAYARSVFDGF----SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRR 188
I+ + + L+ A ++ G SIV+ +++ G+ H N ++E + L +M
Sbjct: 115 I-FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 189 EGVIPNEITILSLVKECGTVE---ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGD 245
G P+ +T +LV G + A E L+ ++ G +V A I+ K G+
Sbjct: 174 MGYQPDTVTFTTLVH--GLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGE 230
Query: 246 FRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVS 301
A + + +E D++I + +I + +D+ FD+F +M GI+P+ T
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 302 LLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR- 360
L+ G + S + ++ I D +L+D + K G + +L+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 361 ----DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEG 416
D++ +N +I G E +E+F EM +G++ N +T+ + +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 417 KRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
+ +F +MV D G+ P + Y ++D L G ++ A
Sbjct: 411 QMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETA 445
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 187/453 (41%), Gaps = 49/453 (10%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGLLDEA 76
G+ + N+++ + + A L D+MV+ D V+++T++ ++ EA
Sbjct: 140 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 199
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLI 136
+ L+ M V +P + ++I N C + L+ +L+
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVI---------------------NGLCKRGEPDLALNLL 238
Query: 137 DMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEI 196
+ K G A +V + T+I G ++++ LF KM +G+ P+
Sbjct: 239 NKMEK------------GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 197 TILSLVK-ECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDS 255
T L+ C + +LL +N I +V A ID + K G A ++D
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 256 -IENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAG 310
+++K D++ + +I + + ++E ++F +M+ G+ N +T +L+ +A
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 311 SLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRD----ILMWN 366
+ + + + G+ D L+D G+++T +F RD I+ +
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 367 VMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHD 426
MI G E +LF + +GV PN +T+ + GL +E LF +M D
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 427 FGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
G +P Y ++ R G + +LI +M
Sbjct: 526 -GPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 170/423 (40%), Gaps = 21/423 (4%)
Query: 176 LNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATA 235
L++ I LF M + P+ + L+ + + L GI+ ++ +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 236 FIDMYGKCGDFRSARYVFDSIEN----KDLMICSAMISAYAQTNCIDEVFDIFVQMNDCG 291
FI+ + + A + + ++ +++++ + N I E + QM + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 292 IRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTY 351
+P+ +T +L+ + + + +G + D ++++ K G+ D
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 352 RLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKAC 407
L + D++++N +I G + A +LF +ME +G+ P+ T+ +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 408 SHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR----P 463
+ G + RL M+ + P + + ++D + G L EA+KL +M P
Sbjct: 296 CNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 464 NNVVLGSLLAACKLHKNVKLGEWAAGQFLS--LESHKCGYNVLMSNIYAAENKWGDVSDI 521
+ V +L+ +K V+ G + L + Y L+ + A + + +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMV 413
Query: 522 RRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAEMREKLDNVGYTPDI 581
+ M G+ + +I ++G + G+ E ++E + + KLD V YT I
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNN---GNVETALV--VFEYMQKRDMKLDIVTYTTMI 468
Query: 582 SAV 584
A+
Sbjct: 469 EAL 471
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK-----DAVSWSTMIRNYGRNGLL 73
E + D+ NA+I + + G L A +L+D+MV D V+++T+I+ + + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 74 DEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLST 133
+E +++ R+M + + + ++IH F + D + + ++ + +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYN 430
Query: 134 SLIDMYVKCKNLAYARSVFDGFS----GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRRE 189
L+D N+ A VF+ IV++TTMI + +G LF + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 190 GVIPNEITILSLV 202
GV PN +T +++
Sbjct: 491 GVKPNVVTYTTMM 503
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 14/299 (4%)
Query: 40 GSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAM 95
GSL+ A LF++M K D + ++T+IR + G D+ LLRDM ++ P +A
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 96 ISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGF 155
++I F + L+ + LH +++ R V TSLID + K L A + D
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTY-TSLIDGFCKENQLDKANHMLDLM 378
Query: 156 ----SGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEAL 211
G +I ++ +I GY N +++G+ LF KM GV+ + +T +L++ + L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 212 EFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAM 267
E K L + + +V +D G+ A +F+ IE D+ I + +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 268 ISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
I + +D+ +D+F + G++P+ T ++ K GSL + +++ G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 194/454 (42%), Gaps = 45/454 (9%)
Query: 158 ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVK-ECGTVEALEFGKL 216
++++ ++ G +++ + L +M G PNE+T ++K C + + +L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 217 LHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFDSIENK----DLMICSAMISAYA 272
L R I + V + ID K G +A +F+ +E K D++I + +I +
Sbjct: 235 LRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 273 QTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTK 332
D+ + M I P+ + +L+ K G L + +H + ++GI DT
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 333 LKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEM 388
TSL+D + K +D + + +I +N++I+G + LELF +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 389 EAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAG- 447
+GV+ + +T+ ++ G L+ K LF +MV + P + Y ++D L G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGE 472
Query: 448 ------LLDEAQKLIIDMPMRPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCG- 500
+ ++ +K +++ + N+++ + A K+ W L L+ K
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD-----AWDLFCSLPLKGVKPDV 527
Query: 501 --YNVLMSNIYAAENKWGDVSD---IRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREH 555
YN+++ + K G +S+ + R M + G S +I + + E GD
Sbjct: 528 KTYNIMIGGLC----KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE---GDATK 580
Query: 556 PETRRIYEIVAEMREKLDNVGYTPDISAVLMNID 589
A++ E++ G++ D S V M +D
Sbjct: 581 S---------AKLIEEIKRCGFSVDASTVKMVVD 605
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/536 (19%), Positives = 208/536 (38%), Gaps = 81/536 (15%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDE 75
GF D + ++ +E A LF++M + D +++ M+ ++ + GL+++
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 76 ALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSL 135
A +MR P+ + T+L
Sbjct: 537 ARKWFNEMREVGCTPNVVTY-------------------------------------TAL 559
Query: 136 IDMYVKCKNLAYARSVFDGFSG----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGV 191
I Y+K K ++YA +F+ +IV+++ +I G+ + + ++F +M
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM----- 614
Query: 192 IPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
CG+ + + + N +VV A +D + K AR
Sbjct: 615 -------------CGSKDVPDVDMYFKQYD-DNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 252 VFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+ D++ + ++ A+I + +DE ++ +M++ G T SL+
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DIL 363
K ++ + S + + + + T ++D K G D Y+L ++ +++
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKM 423
+ MI G M+G E LEL M ++GV PN +T+ + C +G L L +M
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 424 ------VHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLGSLLAACKL 477
H G +E + + + GLLDE + + +++ +L+ A +L
Sbjct: 841 KQTHWPTHTAGYRKVIEGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 478 HKNVKLGEWAAGQFLSLESHKCGYNVLMSNIYAAENKWGDVSDIRRAMRDAGISKE 533
++L E A +L + YN L+ ++ A NK + M G+ E
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLA-NKVETAFQLFSEMTKKGVIPE 953
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 126/623 (20%), Positives = 236/623 (37%), Gaps = 95/623 (15%)
Query: 43 EFARQLFDKMVDKDAVS--WSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIH 100
EF +Q+ D DK+ + ++R + RNG AL+ L ++ R +PS +I
Sbjct: 186 EFLQQIRDD--DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQ 243
Query: 101 VFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVF----DGFS 156
F + L +H M N G L Y CK + ++ + F
Sbjct: 244 AFLKADRLDSASLIHRE-MSLANLRMDGFTLRCF---AYSLCKVGKWREALTLVETENFV 299
Query: 157 GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKL 216
++ +T +I+G + E + +MR +PN +T +L+ CG + + G+
Sbjct: 300 PDTVF-YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL--CGCLNKKQLGRC 356
Query: 217 LHAFT--LRNGITISVVLATAFIDMYGKCGDFRSAR--------------YVFDSI---- 256
+ G S + + + Y GD A YV +I
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 257 --ENKDLMICSAM-------------------ISAYAQTNCI------DEVFDIFVQMND 289
+KD + C + I+ + T C+ ++ F + +M
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 290 CGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDT 349
G P+ T +L A +E+ + + + G+ D T +VD + K G I+
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 350 TYRLF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
+ F +++ + +I A ELF M ++G +PN +T+ +
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 406 ACSHSGLLQEGKRLFHKM-----VHDFGLV----------PKVEHYGCMVDLLSRAGLLD 450
+G +++ ++F +M V D + P V YG ++D ++ ++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 451 EAQKLIIDMPM---RPNNVVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSN 507
EA+KL+ M M PN +V +L+ K+G+ Q + E + G+ +
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGL-----CKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 508 IYAAENKWGDVSDIRRAMRDAGISKEPGVSSIEVNGSVHEFIMGDREHPETRRIYEIVAE 567
+ +++ V R+ + +SK S E I G + +T Y+++
Sbjct: 712 YSSLIDRYFKVK--RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 568 MREKLDNVGYTPDISAVLMNIDG 590
M EK G P++ IDG
Sbjct: 770 MEEK----GCQPNVVTYTAMIDG 788
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 209/483 (43%), Gaps = 49/483 (10%)
Query: 20 NGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDE 75
+G +V ++I + + L A LFDKM ++V++S +I + +NG +++
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 76 ALDLLRDMRVARVKPSEIAMISIIH-------------VFAELVDLKLGKALHGYVMRNR 122
AL+ + M V + PS + +II +F E + L + +
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW 452
Query: 123 NCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRL 182
C Q +T L+ +R + G ++VS+ ++ G+ N++ +
Sbjct: 453 LCKQGKTDEATELLSKM-------ESRGI-----GPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 183 FVKMRREGVIPNEITILSLVKEC----GTVEALEFGKLLHAFTLRNGITISVVLATAFID 238
F + +G+ PN T L+ C ALE +++ T N I ++ V+ I+
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE---VVNHMTSSN-IEVNGVVYQTIIN 556
Query: 239 MYGKCGDFRSARYVF-DSIENKDL----MICSAMISAYAQTNCIDEVFDIFVQMNDCGIR 293
K G AR + + IE K L M +++I + + +D + +M GI
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 294 PNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRL 353
PN IT SL+ K ++ + + +G+K D +L+D + K ++++ L
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 354 FAAATDRDI----LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSH 409
F+ + + ++N +ISG LG+ AAL+L+ +M G+ + T+ +
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 410 SGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMRPNNVVLG 469
G L L+ +M GLVP Y +V+ LS+ G + K+ + M+ NNV
Sbjct: 737 DGNLILASELYTEM-QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE--MKKNNVTPN 793
Query: 470 SLL 472
L+
Sbjct: 794 VLI 796
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 217/508 (42%), Gaps = 76/508 (14%)
Query: 41 SLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMI 96
SL A++L+ +MV D D V+ ++R R EAL++L +P +
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 97 SIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYA-----RSV 151
+ + +DL + +L + + C S TS+I VK N+ A +
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQ-ETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 152 FDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLV---KECGTV 208
DG S ++V+ T++I G+ N+L + LF KM +EG PN +T L+ ++ G +
Sbjct: 332 SDGIS-MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 209 E-ALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD-SIEN--KDLMIC 264
E ALEF K + G+T SV I + K A +FD S E ++ +C
Sbjct: 391 EKALEFYKKMEVL----GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC 446
Query: 265 SAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDK 324
+ ++S + DE ++ +M GI PN ++ ++++ + ++++ + + S I +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 325 QGIKRDTKLKTSLVD----------------------------MYA-------KCGDIDT 349
+G+K + + L+D +Y K G
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 350 TYRLFAAATDRDIL-----MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGAL 404
L A + L +N +I G G+ ++A+ + EM G+ PN IT+ +
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 405 KACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM----- 459
+ + + + +M + G+ + YG ++D + ++ A L ++
Sbjct: 627 NGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 460 -PMRP--NNVV-----LGSLLAACKLHK 479
P +P N+++ LG+++AA L+K
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYK 713
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 172/397 (43%), Gaps = 27/397 (6%)
Query: 25 DVFVCNAIIMMYGEVGSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEALDLL 80
+VFVCN I+ + G + A +L KM + + VS++ ++ + R +D A +
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 81 RDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYV 140
++ +KP+ +I D + + + M + N +GV T +I+
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH-MTSSNIEVNGVVYQT-IINGLC 559
Query: 141 KCKNLAYARSVFDGFSG-----ASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNE 195
K + AR + S +S+ ++I G+ ++ + + +M G+ PN
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 196 ITILSLV----KECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARY 251
IT SL+ K +ALE + G+ + + A ID + K + SA
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMK----NKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 252 VFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCA 307
+F + N I +++IS + + D++ +M G+R + T +L+
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 308 KAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI----L 363
K G+L + +++ + G+ D + T +V+ +K G ++F ++ L
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 364 MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITF 400
++N +I+G G+ + A L EM +G++P+ TF
Sbjct: 796 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 192/464 (41%), Gaps = 37/464 (7%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMV----DKDAVSWSTMIRNYGRNGLLDEA 76
G +++ N +I + + A L KM+ + V+ S+++ Y + +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYV---------MRNRNCGQS 127
+ L+ M +P I ++IH G LH M R C Q
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIH----------GLFLHNKASEAVALVDRMVQRGC-QP 223
Query: 128 GVPLSTSLIDMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLF 183
+ +++ K ++ A ++ + A I V ++T+I + ++ + LF
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 184 VKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKC 243
+M +GV PN IT SL+ E L + + I +VV A ID + K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 244 GDFRSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITM 299
G A ++D + + D+ S++I+ + + +DE +F M PN +T
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 300 VSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLF----A 355
+L+ KA ++ G + + ++G+ +T T+L+ + + D D +F +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 356 AATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQE 415
+I+ +N ++ G G E A+ +F ++ + P T+ ++ +G +++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 416 GKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
G LF + G+ P V Y M+ R GL +EA L M
Sbjct: 524 GWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 160/391 (40%), Gaps = 54/391 (13%)
Query: 29 CNAIIMMYGEV-------GSLEFARQLFDKM----VDKDAVSWSTMIRNYGRNGLLDEAL 77
C ++ YG V G ++ A L +KM ++ + V +ST+I + + D+AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 78 DLLRDMRVARVKPSEIAMISIIHVFAELVDLK-LGKALHGYVMRNRNCGQSGVPLSTSLI 136
+L +M V+P+ I S+I + L + R N V +LI
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN---PNVVTFNALI 337
Query: 137 DMYVKCKNLAYARSVFDGFSGASI----VSWTTMIAGYIHTNNLNEGIRLFVKMRREGVI 192
D +VK L A ++D SI +++++I G+ + L+E +F M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 193 PNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYV 252
PN +T +L+ + ++ G L + G+ + V T I + + D +A+ V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 253 FDSIENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSL 312
F QM G+ PN +T +LL K G L
Sbjct: 458 FK-------------------------------QMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 313 EMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----DILMWNVM 368
E + Y+ + ++ +++ K G ++ + LF + + + D++++N M
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 369 ISGCAMLGDGEAALELFVEMEAQGVIPNDIT 399
ISG G E A LF +M G +P+ T
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 167/402 (41%), Gaps = 30/402 (7%)
Query: 121 NRNCGQSGVP-LSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEG 179
+RN G P ++ S ID+ C Y F SG + ++ +H+ L++
Sbjct: 18 HRNLQGKGNPRIAPSSIDLCGMC----YWGRAFSSGSG----DYREILRNGLHSMKLDDA 69
Query: 180 IRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDM 239
I LF M + +P+ L+ ++ + L R GI+ ++ I+
Sbjct: 70 IGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINC 129
Query: 240 YGKCGDFRSARYVFDSI----ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPN 295
+ + A + + ++ S++++ Y I + + QM + G RP+
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 296 EITMVSL---LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYR 352
IT +L L L KA E + + ++G + + +V+ K GDID +
Sbjct: 190 TITFTTLIHGLFLHNKAS--EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 353 LF----AAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACS 408
L AA + ++++++ +I + AL LF EME +GV PN IT+ +
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 409 HSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR---PNN 465
+ + RL M+ + + P V + ++D + G L EA+KL +M R P+
Sbjct: 307 NYERWSDASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 466 VVLGSLLAACKLHKNVKLGEWAAGQFLSLESHKCGYNVLMSN 507
SL+ +H + + A F + S C NV+ N
Sbjct: 366 FTYSSLINGFCMHDRL---DEAKHMFELMISKDCFPNVVTYN 404
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 165/417 (39%), Gaps = 68/417 (16%)
Query: 69 RNGL----LDEALDLLRDMRVARVKPSEIAMISIIHVFAELVD-------------LKLG 111
RNGL LD+A+ L M +R PS ++ A++ L +
Sbjct: 58 RNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 112 KALHGY-VMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGY 170
L+ Y ++ N C +S + L+ +L+ +K L Y SIV+ ++++ GY
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMK---LGYE---------PSIVTLSSLLNGY 165
Query: 171 IHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISV 230
H +++ + L +M G P+ IT +L+ L ++ G ++
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 231 VLATAFIDMYGKCGDFRSARYVFDSIE----NKDLMICSAMISAYAQTNCIDEVFDIFVQ 286
V ++ K GD A + + +E +++I S +I + + D+ ++F +
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 287 MNDCGIRPNEITMVSLL-VLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCG 345
M + G+RPN IT SL+ LC + + + I+++
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-------------------- 325
Query: 346 DIDTTYRLFAAATDRDILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALK 405
+ +++ +N +I G A +L+ EM + + P+ T+ +
Sbjct: 326 ------------INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 406 ACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDMPMR 462
L E K +F M+ P V Y +++ +A +DE +L +M R
Sbjct: 374 GFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 203/494 (41%), Gaps = 62/494 (12%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVD----KDAVSWSTMIRNYGRNGLLD 74
E G + +CN++I Y + G L A Q+F +M D D +++T++ Y R G +D
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 75 EALDLLRDMRVARVKPS-----------------------------------EIAMISII 99
EAL L M V P+ EI+ +++
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 100 HVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS--- 156
+L D L V+ R + L+ +I K + + A+ + D +
Sbjct: 479 EALFKLGDFNEAMKLWENVLA-RGLLTDTITLNV-MISGLCKMEKVNEAKEILDNVNIFR 536
Query: 157 -GASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPNEITILSLVKECGTVEALEFGK 215
++ ++ + GY NL E + M R+G+ P +L+ G + K
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS--GAFKYRHLNK 594
Query: 216 LLH-AFTLR-NGITISVVLATAFIDMYGKCGDFRSARYV-FDSIENK---DLMICSAMIS 269
+ LR G+T +V A I + G A F+ IE ++ ICS + +
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654
Query: 270 AYAQTNCIDEVFDIFVQMNDCGIR-PNEITMVSLLVLCAKA--GSLEMGKWIHSYIDKQG 326
+ + + IDE + ++ D + P ++ L A + ++ + + + K+
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL 714
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFA--AATDR---DILMWNVMISGCAMLGDGEAA 381
+ + + + K G ++ +LF+ ++DR D + ++I GCA+ GD A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 382 LELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVD 441
L EM +G+IPN +T+ +K G + +RL HK+ G+ P Y ++D
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK-GITPNAITYNTLID 833
Query: 442 LLSRAGLLDEAQKL 455
L ++G + EA +L
Sbjct: 834 GLVKSGNVAEAMRL 847
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 193/450 (42%), Gaps = 58/450 (12%)
Query: 21 GFHRDVFVCNAIIMMYGEVGSLE----FARQLFDKMVDKDAVSWSTMIRNYGRNGLLDEA 76
G +V N++I Y +G +E R + ++ V ++ V+++++I+ Y + GL++EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 77 LDLLRDMRVARVKPSEIAMISIIHVFAELVD--LKLGKALHGYVMRNRNCGQSGVPLST- 133
+ ++ E +++ H++ L+D + G+ + V + N + GV +T
Sbjct: 316 EHVFELLK-------EKKLVADQHMYGVLMDGYCRTGQ-IRDAVRVHDNMIEIGVRTNTT 367
Query: 134 ---SLIDMYVKCKNLAYARSVFDGFSGASIV----SWTTMIAGYIHTNNLNEGIRLFVKM 186
SLI+ Y K L A +F + S+ ++ T++ GY ++E ++L +M
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 187 RREGVIPNEITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDF 246
++ V+P +T L+K + A L L+ G+ + + ++ K GDF
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 247 RSARYVFDSIENK----DLMICSAMISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSL 302
A +++++ + D + + MIS + ++E +I +N +P T +L
Sbjct: 488 NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Query: 303 LVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDRDI 362
K G+L+ + Y++++GI F I
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGI--------------------------FPT-----I 576
Query: 363 LMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHK 422
M+N +ISG +L +E+ A+G+ P T+ + + G++ + +
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 423 MVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
M+ G+ V + + L R +DEA
Sbjct: 637 MIEK-GITLNVNICSKIANSLFRLDKIDEA 665
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 244 GDFRSARYVFDSI----ENKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC--GIRPNEI 297
G+ A +V+D + + D+ CS +++AY ++ +D+ +F + + G+ N +
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVV 262
Query: 298 TMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAA 357
T SL+ A G +E + + ++G+ R+ TSL+ Y K G ++ +F
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 358 TDRDIL----MWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLL 413
++ ++ M+ V++ G G A+ + M GV N + SG L
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 414 QEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEAQKLIIDM 459
E +++F +M +D+ L P Y +VD RAG +DEA KL M
Sbjct: 383 VEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 180/436 (41%), Gaps = 52/436 (11%)
Query: 19 ENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDK----DAVSWSTMIRNYGRNGLLD 74
+ G + D C+ ++ ++G A +L++ ++ + D ++ + MI + ++
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 75 EALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHGYVMRNRNCGQSGVPLSTS 134
EA ++L ++ + R KP+ ++ H + ++ +LK A+ Y+ R
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER-------------- 569
Query: 135 LIDMYVKCKNLAYARSVFDGFSGASIVSWTTMIAGYIHTNNLNEGIRLFVKMRREGVIPN 194
+ +F +I + T+I+G +LN+ L +++R G+ P
Sbjct: 570 --------------KGIF-----PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 195 EITILSLVKECGTVEALEFGKLLHAFTLRNGITISVVLATAFIDMYGKCGDFRSARYVFD 254
T +L+ + ++ + GIT++V + + + + A +
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 255 SIENKDLMI-----CSAMISAYAQTNCIDEVFDIFVQMNDCG--IRPNEITM-VSLLVLC 306
I + DL++ + A A T + V+ + + PN I V++ LC
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLC 730
Query: 307 AKAGSLEMGKWIHS-YIDKQGIKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR----D 361
KAG LE + + S + D T L+ A GDI+ + L + +
Sbjct: 731 -KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN 789
Query: 362 ILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFH 421
I+ +N +I G LG+ + A L ++ +G+ PN IT+ + SG + E RL
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Query: 422 KMVHDFGLVPKVEHYG 437
KM+ GLV + G
Sbjct: 850 KMIEK-GLVRGSDKQG 864
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 267 MISAYAQTNCIDEVFDIFVQMNDCGIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQG 326
++ YA+ + +F M + G P+ ++ SLL + G + ++ +
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 327 IKRDTKLKTSLVDMYAKCGDIDTTYRLFAAATDR------DILMWNVMISGCAMLGDGEA 380
+ D + +V+ Y + G++D +FA T+ +++ +N +I+G AM+GD E
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 381 ALELFVEMEAQGVIPNDITFIGALKACSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMV 440
+ M +GV N +T+ +K GL++E + +F +++ + LV YG ++
Sbjct: 280 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKLVADQHMYGVLM 338
Query: 441 DLLSRAGLLDEAQKL---IIDMPMRPNNVVLGSLLAA-CK 476
D R G + +A ++ +I++ +R N + SL+ CK
Sbjct: 339 DGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 185/466 (39%), Gaps = 53/466 (11%)
Query: 2 LSHTFISARTRGARFCCENGFHRDVFVCNAIIMMYGEVGSLEFARQLFDKMVDKDAVSWS 61
L+H+ R E F VF + I+ +Y E G ++ A +FD M
Sbjct: 133 LNHSGFVVWGELVRVFKEFSFSPTVF--DMILKVYAEKGLVKNALHVFDNM--------- 181
Query: 62 TMIRNYGRNGLLDEALDLLRDMRVARVKPSEIAMISIIHVFAELVDLKLGKALHG-YVMR 120
NYGR + + R + +A+ HV+ +++ ++ + ++
Sbjct: 182 ---GNYGR--IPSLLSCNSLLSNLVRKGENFVAL----HVYDQMISFEVSPDVFTCSIVV 232
Query: 121 NRNCGQSGVPLSTSLIDMYVKCKNLAYARSVFDGFS-GASIVSWTTMIAGYIHTNNLNEG 179
N C V K + +A+ ++V++ ++I GY ++
Sbjct: 233 NAYCRSGNVD------------KAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 180 IRLFVKMRREGVIPNEITILSLVK---ECGTVEALEFGKLLHAFTL--RNGITISVVLAT 234
R+ M GV N +T SL+K + G +E E H F L + +
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE-----HVFELLKEKKLVADQHMYG 335
Query: 235 AFIDMYGKCGDFRSARYVFDS-IE---NKDLMICSAMISAYAQTNCIDEVFDIFVQMNDC 290
+D Y + G R A V D+ IE + IC+++I+ Y ++ + E IF +MND
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 291 GIRPNEITMVSLLVLCAKAGSLEMGKWIHSYIDKQGIKRDTKLKTSLVDMYAKCGDIDTT 350
++P+ T +L+ +AG ++ + + ++ + L+ Y++ G
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 351 YRLFAAATDR----DILMWNVMISGCAMLGDGEAALELFVEMEAQGVIPNDITFIGALKA 406
L+ R D + + ++ LGD A++L+ + A+G++ + IT +
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 407 CSHSGLLQEGKRLFHKMVHDFGLVPKVEHYGCMVDLLSRAGLLDEA 452
+ E K + V+ F P V+ Y + + G L EA
Sbjct: 516 LCKMEKVNEAKEILDN-VNIFRCKPAVQTYQALSHGYYKVGNLKEA 560