Miyakogusa Predicted Gene
- Lj0g3v0285449.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285449.1 tr|G7I6A4|G7I6A4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,28.79,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; seg,NULL; no
description,Tetratricope,CUFF.19042.1
(456 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 91 2e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 87 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 87 3e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 8e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 4e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 75 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 1e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 1e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 2e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 4e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 1e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 71 1e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 5e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 64 3e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 4e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 9e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 1e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 56 4e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 54 2e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 50 4e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 49 8e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN+L+RA+ +G +E L+ +M DP++ TY++L++ LC++GK EA +L+
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P ++Y+ LI+ C+ G+ D+A +FL+ + G P I+ + V+ + + G
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 369 KYEEAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
K ++A E + G + S N++ Y+ + + G+ + A ++ EMM G+ P+ +
Sbjct: 418 KADQALE-IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 428 NKVRKCL 434
N + CL
Sbjct: 477 NSMISCL 483
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK + A ++ M+ F PD TYN+++ LC GK A +VL +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 312 KDH----------------------------------GL-PKEFNYNILISLLCKHGQFD 336
D+ GL P F YN +I +CK G D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A + + + LKG EP ++++ ++++ GK+EE + + S++ + YS+L
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPN 423
T + G + A +L M +KGL P+
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 260 CKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKE 319
C+ G+Y + L++ M R G++PD+ L+ +A +V+E +EK G P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDV 158
Query: 320 FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
F YN LI+ CK + D A + LD++ K P +T+ +I S GK + A + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 380 SASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
S + Y++L + +G + A K++ EM+ +GLKP+ +N + + + K+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 440 I 440
+
Sbjct: 279 V 279
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ A C++G + A ++ M G PD+ YN +++ LCKNGK +A ++ +
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +YN + S L G A + ++ GI+P +T+ ++I G +
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA E +V S + + S Y+++ K + A +L M+ G +PN + +
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN + A+ GD RA ++ EM +G DPD TYN ++SCLC+ G EA ++L +
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YNI++ CK + + A L+ + G P T+ +I+ G
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 372 EAHE 375
EA E
Sbjct: 561 EAME 564
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%)
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKF 341
PD+ YN L++ CK + +A +VL+ + P YNI+I LC G+ DLA K
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
L+++ +P ++T+ +I++ G +EA + + S+ Y+ + K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 402 KGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+G + A +++ + KG +P+ +N + + L
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 189 LLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDI----VEYVIGK 244
+L+ L + +E ++ ++ E G + LI F G D+ +E +I
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 245 D-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
+ +YN ++ +CK G ++A + ++ G P+ ++YN + S L +G A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
++ + + P E YN +IS LC+ G D A + L + P ++T+ V+
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 364 YFELGKYEEA---HEYVVGSASKQSYSS 388
+ + + E+A E +VG+ + + ++
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETT 545
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 16/252 (6%)
Query: 194 LDKASTVECVRKIMDVLNEVGGLCQSSGI----RLLIEMFTFTGSFDIVEYVIGKDRRKV 249
LD+ +C ++ + C+ SG+ +LL EM + D+V Y
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY--------- 277
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
NVL+ +CK+G + A + +M SG P++ T+N+++ +C G++ +A ++L
Sbjct: 278 ---NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ + P +NILI+ LC+ G A L+K+ G +P L++ ++ + + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
+ A EY+ S+ Y Y+ + T K G + A +IL ++ KG P +N
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 430 VRKCLEKKNEIG 441
V L K + G
Sbjct: 455 VIDGLAKAGKTG 466
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 8/239 (3%)
Query: 205 KIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVN----HYNVLMRAVC 260
KI+++L G + ++I + G + V+ DR V+ YN ++R++C
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL--DRMSVSPDVVTYNTILRSLC 215
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
G ++A ++ M + PD+ TY +L+ C++ A ++L+ + P
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
YN+L++ +CK G+ D A KFL+ + G +P ++TH +++S G++ +A + +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 381 ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK--CLEKK 437
K S +++L +KG + A IL +M G +PN +N + C EKK
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+++R++C G + A L+ +M R GF P + T+N+L++ LC+ G A +LE +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +YN L+ CK + D A ++L+++ +G P I+T+ ++ + + GK E
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E + +SK Y+ + K G A K+L EM K LKP+ ++ +
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 432 KCLEKKNEI 440
L ++ ++
Sbjct: 492 GGLSREGKV 500
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV++ CK G+ A + + R PD+ TYN ++ LC +GK +A +VL+ +
Sbjct: 175 YNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y ILI C+ A K LD++ +G P ++T+ ++ + G+ +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA +++ S + ++++ G + A+K+L +M+ KG P+ FN +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 432 KCLEKKNEIG 441
L +K +G
Sbjct: 352 NFLCRKGLLG 361
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 217 CQSSGI--RLLIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAG 269
CQ + I +++ TG + E ++ RK V +N+L+ +C+KG RA
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 270 FLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLL 329
++++M + G P+ +YN L+ CK K A + LE + P YN +++ L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 330 CKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN 389
CK G+ + A + L++++ KG P ++T+ VI + GK +A + + +K
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 390 ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
YS L ++G + A K +E G++PN FN +
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 256 MRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG 315
+R + + G+ E ++ M G PD+ L+ C+ GK +A ++LE +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 316 LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
+P YN++IS CK G+ + A LD+++ + P ++T+ +++S + GK ++A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 376 YVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + Y Y++L + + A K+L EM D+G P+ +N
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ A+CK G E A ++ ++ G P + TYN ++ L K GK +A ++L+ +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y+ L+ L + G+ D A KF + GI P +T +++ + + +
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
A +++V ++ + +Y++L +G A ++L E+ +KGL
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 10/221 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C++ ++ ++MF V YN+L+ A CK G + L
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVP--------TTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+EM+R G PD+ TYN L++ LC+NG A ++ + + GLP ++IL+ C+
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRK 483
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-AN 391
G+ A L +++ G++P LT+ V+K Y + G + A ++ N A+
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
Y++L + +KG + A +L EM++KGL PN + V++
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 224 LLIEMF----TFTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
+LI+ F GS + + ++ +D + V YN L+ +C G A + +M +
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G P++ TYN L++ CKN EA + +V+ +P YN+LI CK G+ D
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+++ +GI P + T+ +I G E A + + + + + +L
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK-LFDQLTSKGLPDLVTFHILMEG 479
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ +KG A +L EM GLKP +N V K
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 249 VNHYNVLMRAVCK---KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
V YN L+ CK G +A ++KEM + P++TT+N+L+ K+ + +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
V + + P +YN LI+ LC G+ A DK+ G++P ++T+ A+I +
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ +EA + + + + Y++L + K G + + EM +G+ P+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 426 VFN 428
+N
Sbjct: 438 TYN 440
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 213 VGGLCQSSGI---RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAG 269
+ GLC++ I + L + T G D+V + ++LM C+KG+ +A
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTF------------HILMEGYCRKGESRKAA 490
Query: 270 FLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF-NYNILISL 328
L+KEM + G P TYN+++ CK G A + +EK+ L +YN+L+
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ G+ + A L+++ KG+ P +T+ V + + G
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
L+ L K + A+ V + + + P F +N++I+ LCK G+ + AR ++ + + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 350 IEPCILTHAAVIKSYFELGKYEEAH--EYVVGSASKQSYSSN-ANYSLLATLHLKKGNML 406
P ++++ +I Y +LG + + + V+ + S N +++L K N+
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 407 LAQKILYEMMDKGLKPNFSVFNKV 430
+ K+ EM+D+ +KPN +N +
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSL 337
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 244 KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
K R + + L+ +C KG A L+ M GF PD TY +++ LCK+G A A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
+ +E+ + Y+I+I LCK G FD A +++ +KGI+ ++T++++I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
GK+++ + + + +S L + +K+G +L A+++ EM+ +G+ P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 424 FSVFNKV------RKCLEKKNEI 440
+N + CL + N++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQM 372
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 216 LCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM 275
LC+S L +++F +I V+ Y++++ ++CK G ++ A L EM
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVV--------QYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 276 KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
+ G D+ TY+ L+ LC +GK+ + ++L + + +P ++ LI + K G+
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
A++ +++ +GI P +T+ ++I + + EA++ SK YS+L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ K + ++ E+ KGL PN +N
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 224 LLIEMFTFTGSFDIV-----EYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
++I+ GSFD E + + V Y+ L+ +C G ++ +++EM
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
PD+ T++ L+ K GK EA ++ + P YN LI CK A
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+ D + KG EP I+T++ +I SY + + ++ +SK + Y+ L
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ G + A+++ EM+ +G+ P+ +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 84/189 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK+ A + M G +PD+ TY++L++ CK + + ++ +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P YN L+ C+ G+ + A++ ++ +G+ P ++T+ ++ + G+
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E + Y+++ + A + + DKG+KP+ +N +
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 432 KCLEKKNEI 440
L KK +
Sbjct: 533 GGLCKKGSL 541
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 16/222 (7%)
Query: 213 VGGLCQS----SGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+GGLC G ++L EM D+V ++ L+ K+G A
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVV------------TFSALIDVFVKEGKLLEA 334
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
L EM G PD TYN L+ CK EA Q+ + + P Y+ILI+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
CK + D + +I+ KG+ P +T+ ++ + + GK A E S+ S
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 389 NANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
Y +L G + A +I +M + ++N +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ + CK + L +E+ G P+ TYN LV C++GK A ++ + +
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y IL+ LC +G+ + A + +K+ + I + +I K +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A + K Y+++ KKG++ A + +M + G P+ +N
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYN 564
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ YN+++ +C + A L + G PD+ TYN+++ LCK G +EA +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 309 TVEKDHGLPKEFNYNILI 326
+++D P +F YNILI
Sbjct: 550 KMKEDGCTPDDFTYNILI 567
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 35/149 (23%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ G A L +EM G P + TY +L+ LC NG+ +A ++ E ++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 312 KD-------------HGL----------------------PKEFNYNILISLLCKHGQFD 336
K HG+ P YN++I LCK G
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYF 365
A K+ G P T+ +I+++
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+++ C+K A ++ + G++PD T++ LV+ C G+ +EA +++ + +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
P + LI+ LC G+ A +D++ G +P +T+ V+ + G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + +S YS++ K G+ A + EM KG+K + ++ +
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 98/188 (52%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ +C G A L+ M +GF P+ TY +++ +CK+G+ A A ++L +E+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ Y+I+I LCK G D A +++ +KG + I+T+ +I + G++++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ + ++ + +S+L +K+G + A ++L EMM +G+ PN +N +
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 433 CLEKKNEI 440
K+N +
Sbjct: 377 GFCKENRL 384
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 8/212 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ + +F E I + + YN L+ C G ++ L+
Sbjct: 270 IDGLCKDGSLDNAFNLFN--------EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
++M + P++ T+++L+ K GK EA Q+L+ + + P YN LI CK
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ + A + +D + KG +P I+T +I Y + + ++ E + + ++ Y
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+ L + G + +A+K+ EM+ + ++P+
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y++++ +CK G + A L EM+ GF D+ TYN L+ C G++ + ++L +
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P +++LI K G+ A + L ++ +GI P +T+ ++I + + +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EEA + V SK +++L + K + ++ EM +G+ N +N +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 213 VGGLCQS----SGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+GG C + G +LL +M S ++V ++VL+ + K+G A
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVV------------TFSVLIDSFVKEGKLREA 352
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
L+KEM + G P+ TYN L+ CK + EA Q+++ + P +NILI+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
CK + D + +++L+G+ +T+ +++ + + GK E A + S++
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 389 NANYSLL 395
+Y +L
Sbjct: 473 IVSYKIL 479
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK+ E A +V M G DPD+ T+N+L++ CK + + ++ +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ YN L+ C+ G+ ++A+K ++ + + P I+++ ++ + G+ E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 372 EAHE 375
+A E
Sbjct: 491 KALE 494
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFL 271
+ G C+ + + I+M V+ +I K + +N+L+ CK + L
Sbjct: 375 IDGFCKENRLEEAIQM---------VDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 272 VKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCK 331
+EM G + TYN LV C++GK A ++ + + P +Y IL+ LC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 332 HGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN 391
+G+ + A + KI +E I + +I K ++A + K
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
Y+++ + +K ++ A + +M ++G P+ +N
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 260 CKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE-TVEKDHGLPK 318
C+K Y A + ++ + G++PD +N L++ LC + +EA ++++ VE H P
Sbjct: 136 CRKLSY--AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK-PT 192
Query: 319 EFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVV 378
N L++ LC +G+ A +D++ G +P +T+ V+ + G+ A E +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 379 GSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ YS++ K G++ A + EM KG K + +N +
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 43/200 (21%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+++ I +E+F ++ + YN L++ C+ G E A L
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTV--------TYNTLVQGFCQSGKLEVAKKLF 461
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD-------------HG---- 315
+EM PD+ +Y +L+ LC NG+ +A ++ +EK HG
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 316 ------------LP------KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTH 357
LP YNI+IS LC+ A K+T +G P LT+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 358 AAVIKSYFELGKYEEAHEYV 377
+I+++ A E +
Sbjct: 582 NILIRAHLGDDDATTAAELI 601
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V +N L A+ K YE L K+M+ G + T +++++C C+ K + A +
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ K P +N L++ LC + A + +D++ G +P ++T ++ G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
K +A + + Y + + K G LA ++L +M ++ +K
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L++ + + GD + A + KEM G P++ TYN L+ LCKNGK +A V E ++
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + YNI+I +CK G+ + ++LKG++P ++ + +I + G E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + ++ Y+ L L+ G+ + +++ EM G + S V
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Query: 432 KCL 434
L
Sbjct: 614 NML 616
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
GK V YN ++ +CK + A L KEM+ G P++ TY+ L+SCLC G++++
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++L + + P F ++ LI K G+ A K D++ + I+P I+T++++I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ + +EA + SK + Y+ L K + ++ EM +GL
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 423 NFSVFN 428
N +N
Sbjct: 430 NTVTYN 435
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ + A L+ M G PD+ TY ++V+ LCK G A +L +E
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN +I LCK+ D A ++ KGI P ++T++++I G++
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + ++ +S L +K+G ++ A+K+ EM+ + + P+ ++ +
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 208 DVLNEVGGLCQSSGI-------RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNV-----L 255
DV+ +G Q+ GI +LI F + V+GK + N+ L
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 157
Query: 256 MRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG 315
+ C A LV +M +G+ P+ T+N L+ L + K +EA +++ +
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 316 LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
P Y ++++ LCK G DLA L+K+ +EP +L + +I + ++A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 376 YVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLE 435
+K + YS L + G A ++L +M+++ + P+ F+ +
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 436 KKNEI 440
K+ ++
Sbjct: 338 KEGKL 342
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ C + A + + M PD+ TYN L+ CK + E +V +
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + YNILI L + G D+A++ ++ G+ P I+T+ ++ + GK E
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 372 EAH---EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A EY+ S + + + Y+++ K G + + + KG+KP+ +N
Sbjct: 484 KAMVVFEYLQRSKMEPTIYT---YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 429 KV 430
+
Sbjct: 541 TM 542
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
++ L+ A+ K ++ L ++M+ G + TY++L++C C+ + A VL +
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ + G +P +T +I F K
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + +K Y ++ K+G+ LA +L +M L+P ++N +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 252 YNVLMRAVCKKGDYERA-GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YNV++R +C G+ A GF+ +KR G +PD+ TYN L+S LCK GKF EAC + T+
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKR-GVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ P + +Y ++I LC HG + A +FL + + P +L VI Y G+Y
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY---GRY 418
Query: 371 EEAHEYVVGSASKQSYSSNAN-YSLLATLH--LKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + SY N Y+ A +H +K G ++ A + EM + P+ + +
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 428 N 428
N
Sbjct: 479 N 479
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+LM + K G+ +A + KEM + D YN+++ LC +G A + + K
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
P F YN LIS LCK G+FD A + G+ P +++ +I+ G A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+E+++ ++++ + + G+ A +L M+ G+KPN N +
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ +CK G E+A LV+EM+ G P+ +YN L+ LC +A + T+
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMN 218
Query: 312 KDHGLPKEFNYNILISLLCKHGQF-DLARKFLDKI--TLKGIEPC-ILTHAAVIKSYFEL 367
K P NI++ LC+ G + +K L++I + + P I+ ++ S F+
Sbjct: 219 KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKN 278
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
G +A E + K + + Y+++ GNM+ A + +M+ +G+ P+ +
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 428 NKVRKCLEKKNE 439
N + L K+ +
Sbjct: 339 NTLISALCKEGK 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
+MR +C +G + A +L K+M SG P + T+N L++ LCK G +A ++ + +
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P +YN LI LC D A + + GI P +T ++ + + G
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG------ 240
Query: 375 EYVVGSASKQSY-----SSNANYSL-------LATLHLKKGNMLLAQKILYEMMDKGLKP 422
V+G+ +K+ SS AN L L K GN++ A ++ EM K +
Sbjct: 241 --VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 423 NFSVFNKVRKCL 434
+ V+N + + L
Sbjct: 299 DSVVYNVIIRGL 310
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 39/161 (24%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC---------------- 295
YN L++ +C + ++A +L M + G P+ T N++V LC
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 296 -----------------------KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KNG +A +V + + + + YN++I LC
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
G A F+ + +G+ P + T+ +I + + GK++EA
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+NV++ + GD A ++ M G P++ T N L+ K G+ +A V +
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN+L+ C G LA + D++ +G +P I+T+ +++ G+ +
Sbjct: 468 STKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLK 527
Query: 372 EAH 374
+A
Sbjct: 528 KAE 530
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ K G A ++ EM+ + PD TTYNLL+ C G A Q+ + + +
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y L+ LC G+ A L +I GI + + K Y L + E
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Query: 373 AH 374
A+
Sbjct: 564 AY 565
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +++ +CK+G +A L K G + TYN L++ LC+ G EA ++ +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++E +P E Y ILI LCK G F A K LD + KG+ P I+ + +++ Y +LG
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+ E+A V + S + + KKG+M A + E DK + +F
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
R V Y++L+ + K+G+ E A L+ +M + G +P++ TY ++ LCK GK EA +
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ EF Y LI +C+ G + A L + +GI+P ILT+ VI
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCM 394
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNM 405
G+ EA E SK YS L ++K N+
Sbjct: 395 AGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNI 428
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEAC-QVLETV 310
Y L+ A+C+ G + LV+ ++ GF+ D Y+ + K G +A Q E V
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 311 EKDHGLPKE-FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
EK G+ ++ +Y+ILI L K G + A L K+ +G+EP ++T+ A+I+ ++GK
Sbjct: 270 EK--GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
EEA S Y L +KGN+ A +L +M +G++P+ +N
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 430 V 430
V
Sbjct: 388 V 388
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+KG+ RA ++ +M++ G P + TYN +++ LC G+ +EA +V + V
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV 409
Query: 312 KDHGLPKEFNYNILISLLCKHGQFD----LARKFLD----------KITLKG-------- 349
D Y+ L+ K D + R+FL+ I LK
Sbjct: 410 GDV-----ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 350 -------------IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
+ P T+A +IK Y + G+ EEA E + K S S+ Y+ +
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALE-MFNELRKSSVSAAVCYNRII 523
Query: 397 TLHLKKGNMLLAQKILYEMMDKGL 420
KKG + A ++L E+ +KGL
Sbjct: 524 DALCKKGMLDTATEVLIELWEKGL 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+L++A G Y A L + M PD TY ++ CK G+ EA ++ + K
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ YN +I LCK G D A + L ++ KG+ I T ++ S G +
Sbjct: 511 -SSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
V G S + L K+G+ A ++ M KGL F
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTF 621
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLCQ L+E FD +E IG +V Y +L+ +CK+G + A L+
Sbjct: 697 INGLCQQG---CLVEALRL---FDSLEN-IGLVPSEVT-YGILIDNLCKEGLFLDAEKLL 748
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
M G P++ YN +V CK G+ +A +V+ P F + +I CK
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
G + A + K I +IK + G+ EEA
Sbjct: 809 GDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEAR 850
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 261 KKGDYERAGFLVKEM--KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET-VEKDHGLP 317
+KG+ + A +++ M K + D + ++S CK GK A E+ V+ +P
Sbjct: 146 EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 205
Query: 318 KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYV 377
Y L+S LC+ G+ D R + ++ +G E + ++ I YF+ G +A
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 378 VGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKK 437
K +YS+L K+GN+ A +L +M+ +G++PN + + + L K
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 438 NEI 440
++
Sbjct: 326 GKL 328
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+ A +V+++K GF D+ YN+L+ C + ++L +E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ P YN LIS KH F+ + ++++ G++P + T+ AVI +Y +G+ +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + N Y++L K GN A + EM K ++PN +N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 431 RKCLEKKNE 439
KCL +K +
Sbjct: 694 FKCLNEKTQ 702
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV- 310
+N L+ + + D R LV +M PD+ T +L++ LCK+ + EA +V E +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 311 --EKDHG---LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI---LTHAAVIK 362
D G ++N LI LCK G+ A + L ++ L+ E C+ +T+ +I
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE--ERCVPNAVTYNCLID 414
Query: 363 SYFELGKYEEAHEYV 377
Y GK E A E V
Sbjct: 415 GYCRAGKLETAKEVV 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 213 VGGLCQSSGIRLLIEMF-TFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFL 271
+ LC+S + +E+F G VI D H+N L+ +CK G + A L
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI---HFNTLIDGLCKVGRLKEAEEL 392
Query: 272 VKEMK-RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
+ MK P+ TYN L+ C+ GK A +V+ +++D P N ++ +C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
+H ++A F + +G++ ++T+ +I + + E+A
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 185 AFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGK 244
A+ L+ L DK + E V +++ + + G S LI F F+ VE ++ +
Sbjct: 548 AYNMLIGLFCDK-NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 245 DRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMK-RSGFDPDMTTYNLLVSCLCKNG 298
R V Y ++ A C G+ + A L K+M S +P+ YN+L++ K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 299 KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
F +A + E ++ P YN L L + Q + K +D++ + EP +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ G E A +V MK P++ T N +V +C++ A +E
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ Y LI C + A + +K+ G P + A+I ++ +
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 372 EAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A VV + +S + Y++L L K N ++L +M +G KP+ +N
Sbjct: 529 DAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+ A +V+++K GF D+ YN+L+ C + ++L +E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ P YN LIS KH F+ + ++++ G++P + T+ AVI +Y +G+ +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + N Y++L K GN A + EM K ++PN +N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 431 RKCLEKKNE 439
KCL +K +
Sbjct: 694 FKCLNEKTQ 702
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV- 310
+N L+ + + D R LV +M PD+ T +L++ LCK+ + EA +V E +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 311 --EKDHG---LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI---LTHAAVIK 362
D G ++N LI LCK G+ A + L ++ L+ E C+ +T+ +I
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE--ERCVPNAVTYNCLID 414
Query: 363 SYFELGKYEEAHEYV 377
Y GK E A E V
Sbjct: 415 GYCRAGKLETAKEVV 429
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 213 VGGLCQSSGIRLLIEMF-TFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFL 271
+ LC+S + +E+F G VI D H+N L+ +CK G + A L
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI---HFNTLIDGLCKVGRLKEAEEL 392
Query: 272 VKEMK-RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
+ MK P+ TYN L+ C+ GK A +V+ +++D P N ++ +C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
+H ++A F + +G++ ++T+ +I + + E+A
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ G E A +V MK P++ T N +V +C++ A +E
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ Y LI C + A + +K+ G P + A+I ++ +
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 372 EAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A VV + +S + Y++L L K N ++L +M +G KP+ +N
Sbjct: 529 DAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+ A +V+++K GF D+ YN+L+ C + ++L +E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ P YN LIS KH F+ + ++++ G++P + T+ AVI +Y +G+ +
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + N Y++L K GN A + EM K ++PN +N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 431 RKCLEKKNE 439
KCL +K +
Sbjct: 694 FKCLNEKTQ 702
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 213 VGGLCQSSGIRLLIEMF-TFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFL 271
+ LC+S + +E+F G VI D H+N L+ +CK G + A L
Sbjct: 336 INTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI---HFNTLIDGLCKVGRLKEAEEL 392
Query: 272 VKEMK-RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
+ MK P+ TYN L+ C+ GK A +V+ +++D P N ++ +C
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
+H ++A F + +G++ ++T+ +I + + E+A
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV- 310
+N L+ + + D R LV +M PD+ T +L++ LCK+ + EA +V E +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 311 --EKDHG---LPKEFNYNILISLLCKHGQFDLARKFLDKITLKG-IEPCILTHAAVIKSY 364
D G ++N LI LCK G+ A + L ++ L+ P +T+ +I Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 365 FELGKYEEAHEYV 377
GK E A E V
Sbjct: 417 CRAGKLETAKEVV 429
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 185 AFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGK 244
A+ L+ L DK +T + + D+ E G S LI F F+ VE ++ +
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKE-GKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 245 DRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMK-RSGFDPDMTTYNLLVSCLCKNG 298
R V Y ++ A C G+ + A L K+M S +P+ YN+L++ K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 299 KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
F +A + E ++ P YN L L + Q + K +D++ + EP +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ G E A +V MK P++ T N +V +C++ A +E
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ Y LI C + A + +K+ G P + A+I ++ +
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 372 EAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A VV + +S + Y++L L K N ++L +M +G KP+ +N
Sbjct: 529 DAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 258 AVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLP 317
++CK A ++ ++ ++ + +N L+SCL +N + ++ +++ P
Sbjct: 268 SLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRP 327
Query: 318 KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA------AVIKSYFELGKYE 371
ILI+ LCK + D A + +K+ K + + A +I ++G+ +
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E +V ++ + NA Y+ L + + G + A++++ M + +KPN N +
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 187 GFLLVLNLDKASTV-------ECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVE 239
GF + LD+A + +C+ ++ + G C++ + +E+F +V
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 240 YVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK 299
+ Y L+ + D + A + K+M G P++ TYN L+ LCKNGK
Sbjct: 414 NTV--------TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 300 FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
+A V E ++K P + YNI+ +CK G+ + ++LKG++P ++ +
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 360 VIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
+I + + G EEA+ + + Y+ L HL+ G+ + +++ EM
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
GK V Y+ ++ ++CK + A L EM G PD+ TY+ L+SCLC G++++
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++L + + P +N LI K G+ A K D++ + I+P I+T+ ++I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ + +EA + SK Y+ L K ++ ++ +M +GL
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 423 N 423
N
Sbjct: 414 N 414
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ + + A LV+ M G PD+ TY +++ LCK G+ A +L +E
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K Y+ +I LCK+ D A ++ KGI P + T++++I G++
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + ++ + ++ L K+G ++ A+K+ EM+ + + PN +N +
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ C A LV +M G+ PD T+ LV L ++ K +EA ++E +
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y +I+ LCK G+ DLA L+K+ IE ++ ++ VI S + ++
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A +K YS L + G A ++L +M+++ + PN FN +
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 433 CLEKKNEI 440
K+ ++
Sbjct: 319 AFAKEGKL 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ L+ +C G + A L+ +M +P++ T+N L+ K GK EA +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + + P YN LI+ C H + D A++ + K P ++T+ +I +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ K + E + + + Y+ L + + AQ + +M+ G+ PN
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 426 VFNKVRKCLEKKNEI 440
+N + L K ++
Sbjct: 452 TYNTLLDGLCKNGKL 466
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+G+ + A L+ +M++ + D+ Y+ ++ LCK +A + ++
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F Y+ LIS LC +G++ A + L + + I P ++T ++I ++ + GK
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 372 EAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + ++S N Y+ L + AQ+I M+ K P+ +N +
Sbjct: 328 EA-EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +CK G E+A + + +++S +PD+ TYN++ +CK GK + + ++
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN +IS CK G + A K+ G P T+ +I+++ G
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATL 398
+ E + S + + Y L+ +
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 89/183 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ +C++ A ++ +M + G+ P + T N L++ C + +EA +++ +
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + L+ L +H + A ++++ +KG +P ++T+ AVI + G+ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + + YS + K ++ A + EM +KG++P+ ++ +
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 432 KCL 434
CL
Sbjct: 283 SCL 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 4/198 (2%)
Query: 247 RKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
RK+N +N L+ A K+G A L EM + DP++ TYN L++ C + + E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A Q+ + LP YN LI+ CK + + ++ +G+ +T+ +I
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+F+ + A S + + Y+ L K G + A + + ++P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 423 NFSVFNKVRKCLEKKNEI 440
+ +N + + + K ++
Sbjct: 484 DIYTYNIMSEGMCKAGKV 501
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 8/218 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C + ++FT S D + V+ YN L+ CK L
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVV--------TYNTLINGFCKAKKVVDGMELF 403
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
++M R G + TY L+ + A V + + D P YN L+ LCK+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ + A + + +EP I T+ + + + GK E+ + + K Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + + KKG A + +M + G P+ +N +
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 78/180 (43%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
++ L+ A+ K ++ ++M+ G ++ TYN++++CLC+ + + A +L +
Sbjct: 67 EFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P N L++ C + A +D++ G +P +T ++ F+ K
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V K Y + K+G LA +L +M ++ + +++ V
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 12/266 (4%)
Query: 181 LGRNAF--GFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIV 238
L NAF FLL + T E V K++D + GG +L+ F G D
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAV-KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 239 -----EYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
E + V YN+L+R +C G +E A L+ EM P + TYN+L++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 294 LCKNGKFAEACQVLETVEK-DHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIE 351
L +G+ +A QVL+ + K +H +YN +I+ LCK G+ DL K LD++ + +
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 352 PCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKI 411
P T+ A+ K +EA + ++KQ ++ Y + T +KGN A ++
Sbjct: 386 PNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQL 445
Query: 412 LYEMMDKGLKPNFSVFNKVRK--CLE 435
LYEM G P+ ++ + + CLE
Sbjct: 446 LYEMTRCGFDPDAHTYSALIRGLCLE 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 2/195 (1%)
Query: 241 VIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF 300
V G + V H L+ +CK ++A +++ M SG PD + Y LV+ LCK G
Sbjct: 98 VTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNV 157
Query: 301 AEACQVLETVEKDHGLPKE-FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
A Q++E +E DHG P YN L+ LC G + + +F++++ KG+ P T++
Sbjct: 158 GYAMQLVEKME-DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 360 VIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
++++ ++ +EA + + K + +Y++L T K+G A + E+ KG
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 420 LKPNFSVFNKVRKCL 434
K N +N + +CL
Sbjct: 277 FKANVVSYNILLRCL 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 8/213 (3%)
Query: 216 LCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM 275
LC+++ ++ I + S I+ + Y L+ +CK+G+ A LV++M
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIP--------DASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 276 KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
+ G+ + TYN LV LC G ++ Q +E + + P F Y+ L+ K
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT 227
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
D A K LD+I +KG EP ++++ ++ + + G+ ++A +K ++ +Y++L
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNIL 287
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
G A +L EM P+ +N
Sbjct: 288 LRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 239 EYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNG 298
E ++ + YNVL+ CK+G + A L +E+ GF ++ +YN+L+ CLC +G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 299 KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
++ EA +L ++ P YNILI+ L HG+ + A + L +++ KG
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KG--------- 345
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
H++ V + S Y+ + K+G + L K L EM+ +
Sbjct: 346 --------------NHQFRVTATS---------YNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 419 GLKPNFSVFNKVRKCLEKKNEI 440
KPN +N + E +++
Sbjct: 383 RCKPNEGTYNAIGSLCEHNSKV 404
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ ++C+KG+ A L+ EM R GFDPD TY+ L+ LC G F A +VL +E
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ P N+N +I LCK + DLA + + + K P T+A +++ +
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 371 EEAHE 375
E A E
Sbjct: 546 ELAKE 550
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
L+ +L KA+ ++ ++++++ G + +S L+ G+ V Y + +
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN---VGYAMQLVEKME 168
Query: 250 NH--------YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
+H YN L+R +C G ++ V+ + + G P+ TY+ L+ K
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
EA ++L+ + G P +YN+L++ CK G+ D A ++ KG + ++++ ++
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
+ G++EEA+ + S Y++L G A ++L EM
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 15/255 (5%)
Query: 187 GFLLVLNLDKAS-------TVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVE 239
GF + LD+A + +C ++ + G C++ + +E+F +V
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 240 YVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK 299
+ Y L+ + D + A + K+M G P++ TYN+L+ LCKNGK
Sbjct: 432 NTV--------TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 300 FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
A+A V E +++ P + YNI+I +CK G+ + + ++LKG+ P ++ +
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 360 VIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
+I + G EEA + ++ Y+ L L+ G+ + +++ EM G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 420 LKPNFSVFNKVRKCL 434
+ S V L
Sbjct: 604 FAGDASTIGLVTNML 618
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + + GK V YN ++ +CK + A L
Sbjct: 230 VNGLCKRGDIDLALSLLK--------KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G PD+ TY+ L+SCLC G++++A ++L + + P ++ LI K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K D++ + I+P I T++++I + + +EA SK + + Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
S L K + ++ EM +GL N
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 4/193 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+GD + A L+K+M++ + D+ YN ++ LCK +A + ++
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F Y+ LIS LC +G++ A + L + + I P ++T +A+I ++ + GK
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + K+S + YS L + A+ + M+ K PN ++ +
Sbjct: 346 EA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 431 RK--CLEKKNEIG 441
K C K+ E G
Sbjct: 405 IKGFCKAKRVEEG 417
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ + + +FT + I R V Y+ L+ +C G + A L+
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGI--------RPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+M +P++ T++ L+ K GK EA ++ + + K P F Y+ LI+ C H
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ D A+ + + K P ++T++ +IK + + + EE E + + + Y
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ L + + AQ + +M+ G+ PN +N
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITL--------------------------- 347
P Y +++ LCK G DLA L K+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 348 --------KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH 399
KGI P + T++++I G++ +A + ++ + +S L
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 400 LKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+K+G ++ A+K+ EM+ + + P+ ++ +
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Query: 247 RKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
RK+N ++ L+ A K+G A L EM + DPD+ TY+ L++ C + + E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A + E + P Y+ LI CK + + + +++ +G+ +T+ +I
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+F+ + A S + + Y++L K G + A + + ++P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 423 NFSVFN 428
+ +N
Sbjct: 502 DIYTYN 507
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ AV K +E L ++M+ G D+ TY++ ++C C+ + + A VL +
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ G +P T +I F K
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V + Y + K+G++ LA +L +M ++ + ++N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C++ + +E+F +V + YN L++ + + GD + A +
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTV--------TYNTLIQGLFQAGDCDMAQKIF 453
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
K+M G PD+ TY++L+ LCK GK +A V E ++K P + YNI+I +CK
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ + ++LKG++P ++ + +I + G EEA + ++ Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ L L+ G+ + +++ EM G + S + V
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YN L+R +C G + A L+ +M +P++ T++ L+ K GK EA +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + K P F Y+ LI+ C H + D A+ + + K P ++T+ +IK +
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + EE E + + + Y+ L + G+ +AQKI +M+ G+ P+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 426 VFN 428
++
Sbjct: 467 TYS 469
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + + GK V Y ++ A+C + A L
Sbjct: 227 VNGLCKRGDIDLALSLLK--------KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G P++ TYN L+ CLC G++++A ++L + + P ++ LI K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K D++ + I+P I T++++I + + +EA SK + + Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ L K + ++ EM +GL N +N
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+GD + A L+K+M++ + D+ Y ++ LC +A + ++
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN LI LC +G++ A + L + + I P ++T +A+I ++ + GK
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + K+S + YS L + A+ + M+ K PN +N +
Sbjct: 343 EA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 431 RK--CLEKKNEIG 441
K C K+ E G
Sbjct: 402 IKGFCKAKRVEEG 414
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 205 KIMDVLNEVGGLCQSSGIRLLIE---MFTFTGSFDIVEYVIGKDRRKVN--------HYN 253
K+ D ++ G + QS + ++E + + + + VI R N YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+L+ C++ A ++ +M + G++PD+ T + L++ C + +EA +++ +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
P +N LI L H + A +D++ +G +P + T+ V+ + G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKC 433
+ + + Y+ + N+ A + EM +KG++PN +N + +C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 434 L 434
L
Sbjct: 300 L 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ C + A + + M P++ TYN L+ CK + E ++ +
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + YN LI L + G D+A+K K+ G+ P I+T++ ++ + GK E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 372 EA---HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+A EY+ S + + Y+++ K G + + + KG+KPN ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYT---YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M + P+ T+N L+ L + K +EA +++ +
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITL--------------------------- 347
P F Y +++ LCK G DLA L K+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 348 --------KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH 399
KGI P ++T+ ++I+ G++ +A + ++ + +S L
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 400 LKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+K+G ++ A+K+ EM+ + + P+ ++ +
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 3/184 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGF-LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V NVL++A+C+ AG + EM + G DPD TY L+S LC+ G+ EA ++
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 308 -ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
E VEKD P Y LI+ LC D A ++L+++ KGIEP + T+++++ +
Sbjct: 216 TEMVEKDCA-PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK 274
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G+ +A E ++ + Y+ L T K+ + A ++L M +GLKP+ +
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Query: 427 FNKV 430
+ KV
Sbjct: 335 YGKV 338
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 30/241 (12%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ I ++FT D V+ Y L+ +C + + A +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVV--------TYTSLINGLCGSKNVDEAMRYL 250
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+EMK G +P++ TY+ L+ LCK+G+ +A ++ E + P Y LI+ LCK
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVVGSASKQSYSS 388
+ A + LD++ L+G++P + VI + + K+ EA E ++G + +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 389 NANYSLLATLHLKKGNMLL----------AQKILYEMMDKGLKPNFSVFNKVRKCLEKKN 438
N +H+K N ++ A + M +G+ + KCL KK
Sbjct: 371 N--------IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG 422
Query: 439 E 439
E
Sbjct: 423 E 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKN-GKFAEACQVLETVEKDHGLPKEFNYNILISLLCK 331
K M+ G P + + N+L+ LC+N G ++ + K P + Y LIS LC+
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 332 HGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN 391
G+ D A+K ++ K P ++T+ ++I +EA Y+ SK +
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
YS L K G L A ++ MM +G +PN + + L K+ +I
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+ G + A L EM P + TY L++ LC + EA + LE ++
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F Y+ L+ LCK G+ A + + + +G P ++T+ +I + K +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA E ++ + Q +A Y + + A L EM+ G+ PN +N
Sbjct: 315 EAVE-LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 94/177 (53%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L++ + +G A LV M +G PD+ TYN +V+ +C++G + A +L +E
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + F Y+ +I LC+ G D A ++ KGI+ ++T+ ++++ + GK+
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + S++ + +++L + +K+G + A ++ EM+ +G+ PN +N
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ LC+ I I +F + I V+ YN L+R +CK G + L+
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVV--------TYNSLVRGLCKAGKWNDGALLL 286
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
K+M P++ T+N+L+ K GK EA ++ + + P YN L+ C
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-N 391
+ A LD + P I+T ++IK Y + + ++ + V + SK+ +NA
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK-VFRNISKRGLVANAVT 405
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
YS+L + G + LA+++ EM+ G+ P+ +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM C + A ++ M R+ PD+ T+ L+ C + + +V +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K + Y+IL+ C+ G+ LA + ++ G+ P ++T+ ++ + GK E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E + Y+ + K G + A + + KG+KPN + +
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 432 KCLEKKNEI 440
L KK +
Sbjct: 516 SGLCKKGSL 524
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 81/177 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L++ C + + + + + G + TY++LV C++GK A ++ + +
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
LP Y IL+ LC +G+ + A + + + ++ I+ + +I+ + GK E
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A K + Y+++ + KKG++ A +L +M + G PN +N
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSF----DIVEYVI--------GK---------DRRK--- 248
V G CQS I+L E+F S D++ Y I GK D +K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 249 ---VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
+ Y ++ +CK G E A L + G P++ TY +++S LCK G +EA
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI 345
+L +E+D P + YN LI + G + K ++++
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ CK GD E A + KE+K GF P + T+ +++ CK G F + ++L V
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV- 301
Query: 312 KDHGL------------------------------------PKEFNYNILISLLCKHGQF 335
K+ GL P YNILI+ LCK G+
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
++A FLD+ + KG+ P L++A +I++Y + +Y+ A + ++ A + Y +L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ G+M A + +++D+G+ P+ +++N
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGF------------------------------- 280
+ ++ CK+GD+ + L+ E+K G
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 281 ----DPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
PD+ TYN+L++ LCK GK A L+ K +P +Y LI CK ++D
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
+A K L ++ +G +P I+T+ +I G ++A V + A Y++L
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ K G L A+ + EM+D+ + P+ V+
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +L+ + G + A + ++ G PD YN+L+S LCK G+F A + +
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ LP + Y LI + G FD ARK KG++ ++ H A+IK + G +
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + YS + ++K+ +M A KI M KPN + +
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
LI+ F +G FD V K V H+N +++ C+ G + A + M
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
PD TY+ ++ K A A ++ +EK+ P Y LI+ C G F +A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 340 KFLDKITLKGIEPCILTHAAVIKS 363
+ ++ L+ + P ++T+ +I+S
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRS 634
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 249 VNHYN--VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
V++Y+ +L++ +C +G E L++ G P++ YN ++ CK G A V
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ ++ +P + +I+ CK G F + + L ++ +G+ + +I + +
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
G + E + + A Y++L K+G +A L E KGL PN
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 1/178 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + GD++ A + G D+ +N ++ C++G EA + +
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++H +P +F Y+ +I K A K + +P ++T+ ++I + G ++
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE-MMDKGLKPNFSVFN 428
A E + + Y+ L K+ + L +E MM PN FN
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 224 LLIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
+LI F F G+ D+ + K K V YN L+ CK + L++ M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G +P++ +YN++++ LC+ G+ E VL + + E YN LI CK G F A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
++ G+ P ++T+ ++I S + G A E++ + + Y+ L
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+KG M A ++L EM D G P+ +N +
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ CK+G++ +A + EM R G P + TY L+ +CK G A + L+ +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P E Y L+ + G + A + L ++ G P ++T+ A+I + GK E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A + K +YS + + + ++ A ++ EM++KG+KP+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +KG A +++EM +GF P + TYN L++ C GK +A VLE ++
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +Y+ ++S C+ D A + ++ KGI+P +T++++I+ + E + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + Y+ L + +G++ A ++ EM++KG+ P+ ++ +
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 432 KCLEKKN 438
L K++
Sbjct: 563 NGLNKQS 569
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ C+ D + A + +EM G PD TY+ L+ C+ + EAC + E +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P EF Y LI+ C G + A + +++ KG+ P ++T++ +I + +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 372 EAHEYVVGSASKQSYSSNANYSLL----ATLHLK-----------KGNMLLAQKILYEMM 416
EA ++ ++S S+ Y L + + K KG M A ++ M+
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 417 DKGLKPNFSVFN 428
K KP+ + +N
Sbjct: 633 GKNHKPDGTAYN 644
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 50/222 (22%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL----------------- 294
Y L+ A C +GD E+A L EM G PD+ TY++L++ L
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 295 ---------------------------------CKNGKFAEACQVLETVEKDHGLPKEFN 321
C G EA QV E++ + P
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
YNI+I C+ G A ++ G +T A++K+ + GK E + +V
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 382 SKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
S +L ++ ++GNM + +L EM G PN
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK---NGKFAEACQVLE 308
+++++++ + ++A +V + GF P + +YN ++ + N FAE V +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE--NVFK 194
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + P F YNILI C G D+A DK+ KG P ++T+ +I Y +L
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K ++ + + A K + +Y+++ ++G M +L EM +G + +N
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 429 KVRK 432
+ K
Sbjct: 315 TLIK 318
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ +CK + A L+ M++ G PD+ TYN L+S LC +G++++A +++ +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P F +N LI K G+ A +F +++ + ++P I+T++ +I + +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA E SK + YS+L + K + K+ EM +G+ N
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+S + +++ + + IG D V YN L+ +C G + A +V
Sbjct: 193 IDGLCKSKQVDNALDLLN-----RMEKDGIGPD---VVTYNSLISGLCSSGRWSDATRMV 244
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
M + PD+ T+N L+ K G+ +EA + E + + P Y++LI LC +
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ D A + + KG P ++T++ +I Y + K E + + + + Y
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++L + + G + +A++I M+ G+ PN +N
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ C+ A ++ +M G+ P++ YN ++ LCK+ + A +L +E
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
KD P YN LIS LC G++ A + + +T + I P + T A+I + + G+
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA E+ + YSLL + A+++ M+ KG P+ ++ +
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 432 K--CLEKKNEIG 441
C KK E G
Sbjct: 334 NGYCKSKKVEHG 345
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 215 GLCQSSGIRLLIEMFTFT---GSF-DIVEYVIGKD----RRKVNH--------------- 251
GLC S + EMF F G F D+V Y I + +KV H
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 252 ----YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
Y +L++ C+ G A + + M G P++ TYN+L+ LC NGK +A +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
++K+ YNI+I +CK G+ A + +G+ P I T+ ++ ++
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 368 GKYEEA 373
G EA
Sbjct: 480 GLRREA 485
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 82/176 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+L+ C+ A + +M + G +P + T+ L++ C+ + +A + + +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P YN +I LCK Q D A L+++ GI P ++T+ ++I G++ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A V ++ Y ++ L +K+G + A++ EM+ + L P+ ++
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 196 KASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV------ 249
K+ VE K+ +++ G + + +LI+ + G ++ E + RR V
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF---RRMVFCGVHP 394
Query: 250 --NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
YNVL+ +C G E+A ++ +M+++G D D+ TYN+++ +CK G+ A+A +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
++ +P + Y ++ L K G A K+ GI P
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ +C + A + M G PD+ TY++L++ CK+ K ++ +
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + Y ILI C+ G+ ++A + ++ G+ P I+T+ ++ + GK E
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A + + Y+++ K G + A I + +GL P+ + +
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 432 KCLEKK 437
L KK
Sbjct: 474 LGLYKK 479
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ +G E A ++ EMK GF PDM TYN ++S +C G+ A +VL ++
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMK 319
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P +YNILI +G ++A + D++ +G+ P T+ +I F K E
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + K + Y++L + + G+ A + EMM G++P + +
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 432 KCLEKKNE 439
L +KN+
Sbjct: 440 YVLCRKNK 447
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ C+ GD ++A L EM G P TY L+ LC+ K EA ++ E V
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P N L+ C G D A L ++ + I P +T+ +++ GK+E
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA E + + + +Y+ L + + KKG+ A + EM+ G P +N +
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 432 KCLEKKNE 439
K L K E
Sbjct: 580 KGLSKNQE 587
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 45/216 (20%)
Query: 216 LCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR-KVNHYNVLMRAVCKKGDYERAGFLVKE 274
LC+ + R E+F E V+GK + + N LM C G+ +RA L+KE
Sbjct: 442 LCRKNKTREADELF---------EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
M +PD TYN L+ LC GKF EA +++ +++ P +YN LIS K G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
A D++ G P +LT+ A++K L K +E
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKG---LSKNQEGE-------------------- 589
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
LA+++L EM +G+ PN S F V
Sbjct: 590 ------------LAEELLREMKSEGIVPNDSSFCSV 613
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ + + E A L++E++ G D TYN+L++ C++G +A + + +
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P +F Y LI +LC+ + A + +K+ KG++P ++ ++ + +G +
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + Y+ L +G A++++ EM +G+KP+ +N +
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 432 KCLEKKNE 439
KK +
Sbjct: 545 SGYSKKGD 552
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+R GD E A EM + G P TYN L+ L K EA ++L
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI-EAAEILIREI 388
Query: 312 KDHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
++ G+ YNILI+ C+HG A D++ GI+P T+ ++I K
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 371 EEAHEY---VVGSASKQSYSSNANYSLLATL---HLKKGNMLLAQKILYEMMDKGLKPNF 424
EA E VVG K + ++ TL H GNM A +L EM + P+
Sbjct: 449 READELFEKVVGKGMK------PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 425 SVFN 428
+N
Sbjct: 503 VTYN 506
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LMR +C +G +E A L+ EMKR G PD +YN L+S K G A V + +
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
P YN L+ L K+ + +LA + L ++ +GI P + +VI++ L
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 266 ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNIL 325
E A +M R ++ T+N++++ LCK GK +A L +E P YN L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 326 ISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQS 385
+ G+ + AR + ++ KG +P + T+ ++ G+ A E +
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGL 323
Query: 386 YSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
+ +Y++L G++ +A EM+ +G+ P F +N + L +N+I
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 252 YNVLMRAVCKKGD-YERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF-AEACQVLET 309
YNV++ K G + + LV++MK G PD TYN L++C CK G EA QV E
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEE 304
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
++ + YN L+ + K + A K L+++ L G P I+T+ ++I +Y G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+EA E A K + Y+ L + + G + A I EM + G KPN FN
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A + G + A L +M G PD+ TY L+S + GK A + E +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N I + G+F K D+I + G+ P I+T ++ + + G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E ++ L + + + G+ A + M+D G+ P+ S +N V
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 432 KCLEK 436
L +
Sbjct: 532 AALAR 536
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDR--- 246
L+ ++A VE I + + G I+M+ G F + + +
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 247 --RKVNHYNVLMRAVCKKG-DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
+ +N L+ + G D E +G + KEMKR+GF P+ T+N L+S + G F +A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSG-VFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
V + P YN +++ L + G ++ + K L ++ +P LT+ +++ +
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 364 YF---ELGKYEEAHEYVVGSASKQSYSS--NANYSLLATLHL--KKGNMLL-AQKILYEM 415
Y E+G ++ S +++ YS LL TL L K ++L A++ E+
Sbjct: 569 YANGKEIG--------LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 416 MDKGLKPNFSVFNKV------RKCLEKKNEI 440
++G P+ + N + R+ + K N +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 259 VCKKGDY----ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
VC K D ERA E+K GF PD+TT N +VS + A+A VL+ +++
Sbjct: 603 VCSKCDLLPEAERA---FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P YN L+ + + F + + L +I KGI+P I+++ VI +Y + +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ Y+ + A ++ M+ G +PN + +N +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM + D+ ++ +++E+ G PD+ +YN ++ C+N + +A ++ +
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P YN I F+ A + + G P T+ +++ Y +L + +
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 372 EAHEYV 377
EA +V
Sbjct: 787 EAKLFV 792
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 206 IMDVLNEVGGLCQSSGIRLLIEMFTFTGSF----DIVEYVIGKD-RRKVNHYNVLMRAVC 260
++D + E G + L+ M + + F +I+ ++ K + + YN ++ A C
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
+ A + EM+ SG PD+ TYN + + F EA V+ + K P +
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
YN ++ CK + D A+ F++ L+ ++P
Sbjct: 771 TYNSIVDGYCKLNRKDEAKLFVED--LRNLDP 800
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 75/190 (39%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + G E A + +EM+ +G P++ T+N + GKF E ++ + +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N L+++ ++G ++ G P T +I +Y G +E
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A + Y+ + + G ++K+L EM D KPN + +
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 432 KCLEKKNEIG 441
EIG
Sbjct: 567 HAYANGKEIG 576
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK G+ A L+ EM+ PD+ TY +L++ LC + AEA ++ + ++
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI CK + A ++T G+EP I+T + +I Y + +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
A K Y+ L H K+ NM A ++ +M++ G+ PN F
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ Y VL + K+G Y + L+ EM G P++ Y + + LC++ K EA ++ E
Sbjct: 199 VHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFE 258
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++K LP + Y+ +I CK G A +I + + P ++ ++ + +
Sbjct: 259 LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ A V + Y+ L H K GNML A +L EM L P+
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ CK G+ +A L KE+ + P++ + LV CK + A + +
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + YN LI CK G A L ++ + P + T+ +I +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA+ +++ + S+A Y+ L + K+ NM A + EM G++PN F+ +
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%)
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
M G PD+ Y +L C K G +++ ++L+ + P + Y I I LC+ +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A K + + G+ P + T++A+I Y + G +A+ + + +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
L K ++ A+ + M+ G+ PN V+N
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+R +CKKGD + L+ ++ + G P++ TYNL + LC+ G+ A +++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI LCK+ +F A +L K+ +G+EP T+ +I Y + G +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A E +VG A + + Y L +G A + E + KG+KPN ++N +
Sbjct: 339 LA-ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 431 RKCLEKKNEI 440
K L + I
Sbjct: 398 IKGLSNQGMI 407
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+ + E A ++ M +G DPD+ TYN L++ LCK KF + + +T+
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F +NIL+ LC++ + D A L+++ K + P +T +I + + G +
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 372 EAHEYVVGSASKQSY---SSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
A Y + +++Y SS Y+++ +K N+ +A+K+ EM+D+ L P+
Sbjct: 584 GA--YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 6/255 (2%)
Query: 179 VHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIV 238
V L + F LL + K EC K++D + + G L L I+ G D
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKEC-EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 239 EYVIG-----KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
++G + V YN L+ +CK ++ A + +M G +PD TYN L++
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
CK G A +++ + +P +F Y LI LC G+ + A ++ KGI+P
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
++ + +IK G EA + + K +++L K G + A ++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 414 EMMDKGLKPNFSVFN 428
M+ KG P+ FN
Sbjct: 451 VMISKGYFPDIFTFN 465
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L +M SG ++T+N L+ LCK G E ++L+ V K LP F YN+ I LC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
+ G+ D A + + + +G +P ++T+ +I + K++EA Y+ ++ +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
Y+ L + K G + LA++I+ + + G P+
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ + +G A L EM G P++ T+N+LV+ LCK G ++A +++ +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F +NILI + + A + LD + G++P + T+ +++ + K+E
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ E K + +++L + + A +L EM +K + P+ F
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 197 ASTVECVRKIMDVLN-------EVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
+ ++C + M L EVG S R +IE + G F+ +E V+ R V
Sbjct: 11 TAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENV 70
Query: 250 -NH-----YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
NH Y M+ +KG + A + + M +P + +YN ++S L +G F +A
Sbjct: 71 GNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQA 130
Query: 304 CQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
+V + +D G+ P +++ I + CK + A + L+ ++ +G E ++ + V+
Sbjct: 131 HKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
++E E +E + + ++ L + KKG++ +K+L +++ +G+ P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 423 NFSVFNKVRKCLEKKNEI 440
N +N + L ++ E+
Sbjct: 250 NLFTYNLFIQGLCQRGEL 267
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C +G+ RA L E G P++ YN L+ L G EA Q+ +
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P+ +NIL++ LCK G A + + KG P I T +I Y K E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A E + Y+ L K + M++KG PN FN
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+ IR + F S DI V+ Y ++ C+ GD AG L
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVL--------TYTAIISGFCQIGDMVEAGKLF 409
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G +PD T+ L++ CK G +A +V + + P Y LI LCK
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G D A + L ++ G++P I T+ +++ + G EEA + V + + Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKP------------------------------ 422
+ L + K G M AQ+IL EM+ KGL+P
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 423 -----NFSVFNKVRK 432
N + FN + K
Sbjct: 590 KGIAPNATTFNSLVK 604
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ +CK G+ E A LV E + +G + D TY L+ CK+G+ +A ++L+ +
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N+L++ C HG + K L+ + KGI P T +++K Y +
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A S+ Y L H K NM A + EM KG + S ++ +
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 432 KCLEKKNE 439
K K+ +
Sbjct: 674 KGFLKRKK 681
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+ ++ C+ G+ ++ L++ MKR G P+ Y ++ LC+ K AEA +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + LP Y LI CK G A KF ++ + I P +LT+ A+I + ++G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA + K + ++ L + K G+M A ++ M+ G PN +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 429 KVRKCLEKKNEI 440
+ L K+ ++
Sbjct: 461 TLIDGLCKEGDL 472
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 93/182 (51%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN+++ VC+ G + A L+ M+ G+ PD+ +Y+ +V+ C+ G+ + +++E
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P + Y +I LLC+ + A + ++ +GI P + + +I + + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A ++ S+ Y+ + + + G+M+ A K+ +EM KGL+P+ F
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 429 KV 430
++
Sbjct: 426 EL 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+S I E G F+ G + V Y LM A CK G+ ++A ++
Sbjct: 498 VNGLCKSGNIE---EAVKLVGEFEAA----GLNADTVT-YTTLMDAYCKSGEMDKAQEIL 549
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KEM G P + T+N+L++ C +G + ++L + P +N L+ C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
A + +G+ P T+ ++K + + +EA K S + Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
S+L LK+ L A+++ +M +GL + +F+
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%)
Query: 268 AGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILIS 327
A + +E G ++ +YN+++ +C+ G+ EA +L +E P +Y+ +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 328 LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYS 387
C+ G+ D K ++ + KG++P + ++I + K EA E +
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 388 SNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
Y+ L K+G++ A K YEM + + P+ + +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Query: 172 NEFNHR--RVHLGRNAFGFLLVLN-LDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEM 228
NE H ++ L N F + ++N L K+ +E K++ G + L++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 229 FTFTGSFD----IVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
+ +G D I++ ++GK + + +NVLM C G E L+ M G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
TT+N LV C A + + + P Y L+ CK A
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 344 KITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
++ KG + T++ +IK + + K+ EA E
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+ IR + F S DI V+ Y ++ C+ GD AG L
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVL--------TYTAIISGFCQIGDMVEAGKLF 409
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G +PD T+ L++ CK G +A +V + + P Y LI LCK
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G D A + L ++ G++P I T+ +++ + G EEA + V + + Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKP------------------------------ 422
+ L + K G M AQ+IL EM+ KGL+P
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 423 -----NFSVFNKVRK 432
N + FN + K
Sbjct: 590 KGIAPNATTFNSLVK 604
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ +CK G+ E A LV E + +G + D TY L+ CK+G+ +A ++L+ +
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N+L++ C HG + K L+ + KGI P T +++K Y +
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A S+ Y L H K NM A + EM KG + S ++ +
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 432 KCLEKKNE 439
K K+ +
Sbjct: 674 KGFLKRKK 681
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+ ++ C+ G+ ++ L++ MKR G P+ Y ++ LC+ K AEA +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + LP Y LI CK G A KF ++ + I P +LT+ A+I + ++G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA + K + ++ L + K G+M A ++ M+ G PN +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 429 KVRKCLEKKNEI 440
+ L K+ ++
Sbjct: 461 TLIDGLCKEGDL 472
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 93/182 (51%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN+++ VC+ G + A L+ M+ G+ PD+ +Y+ +V+ C+ G+ + +++E
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P + Y +I LLC+ + A + ++ +GI P + + +I + + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A ++ S+ Y+ + + + G+M+ A K+ +EM KGL+P+ F
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 429 KV 430
++
Sbjct: 426 EL 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+S I E G F+ G + V Y LM A CK G+ ++A ++
Sbjct: 498 VNGLCKSGNIE---EAVKLVGEFEAA----GLNADTVT-YTTLMDAYCKSGEMDKAQEIL 549
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KEM G P + T+N+L++ C +G + ++L + P +N L+ C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
A + +G+ P T+ ++K + + +EA K S + Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
S+L LK+ L A+++ +M +GL + +F+
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%)
Query: 268 AGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILIS 327
A + +E G ++ +YN+++ +C+ G+ EA +L +E P +Y+ +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 328 LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYS 387
C+ G+ D K ++ + KG++P + ++I + K EA E +
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 388 SNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
Y+ L K+G++ A K YEM + + P+ + +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Query: 172 NEFNHR--RVHLGRNAFGFLLVLN-LDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEM 228
NE H ++ L N F + ++N L K+ +E K++ G + L++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 229 FTFTGSFD----IVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
+ +G D I++ ++GK + + +NVLM C G E L+ M G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
TT+N LV C A + + + P Y L+ CK A
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 344 KITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
++ KG + T++ +IK + + K+ EA E
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N M + K G+ E+ + +E+K F PD +Y++L+ L K G E ++ ++++
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ YNI+I CK G+ + A + L+++ KG EP ++T+ +VI ++ + +E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A+ + SK+ + YS L K G + A IL E+M KGL PN +N +
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 433 CLEKKNEI 440
L K EI
Sbjct: 701 ALVKAEEI 708
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ + L+R K+G + A L+ EMK S D D+ YN+ + K GK A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+E + P E Y +I +LCK + D A + + + PC + +I Y G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K++EA+ + +K S S Y+ + T K G + A K+ +E M K PN S +N
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV-FEEMKKDAAPNLSTYN 381
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
+I + G FD ++ + R K V YN ++ + K G + A + +EMK+
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
P+++TYN+L+ LC+ GK A ++ ++++K P NI++ LCK + D A
Sbjct: 374 -APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH 399
+++ K P +T ++I ++G+ ++A++ +++ Y+ L
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 400 LKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
G KI +M+++ P+ + N C+ K E
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ K G + A +++E+ + G P++ T+N L+ L K + EA ++++
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + Y ILI+ LCK +F+ A F ++ +G++P +++ +I + G
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 372 EA 373
EA
Sbjct: 780 EA 781
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 88/178 (49%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N ++ +V K G+ +KEM + PD+ T+N+L++ LC G F ++ +++ +EK
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P YN ++ CK G+F A + LD + KG++ + T+ +I + +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + + + + Y+ L +G +L+A ++L EM+ GL PN FN +
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 224 LLIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
+LI + GSF+ Y++ K + + YN ++ CKKG ++ A L+ MK
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G D D+ TYN+L+ LC++ + A+ +L + K P E YN LI+ G+ +A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+ L+++ G+ P +T A+I + G ++EA + +K S +Y +L
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 399 HLKKGNMLLAQKILYEMMDKGL 420
K LA+ M G+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGV 439
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VL+ +CK +++ A MKR+G TY ++ LCKNG EA +L +
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
KD P Y+ LI+ CK G+F A++ + +I G+ P + ++ +I + +G +
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA + + +++L T K G + A++ + M G+ PN F+
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 240 YVIGKD-RRKVNH-----YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
Y++ +D R+++ H YN L+ +G A L+ EM G P+ T+N L+
Sbjct: 323 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
G F EA ++ +E P E +Y +L+ LCK+ +FDLAR F ++ G+
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKIL 412
+T+ +I + G +EA ++ SK + YS L K G A++I+
Sbjct: 443 RITYTGMIDGLCKNGFLDEA-VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 413 YEMMDKGLKPNFSVFNKV 430
+ GL PN +++ +
Sbjct: 502 CRIYRVGLSPNGIIYSTL 519
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK G + A L+ EM + G DPD+ TY+ L++ CK G+F A +++ +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y+ LI C+ G A + + + L+G T ++ S + GK
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA E++ S + ++ L + G L A + EM G P F + +
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 432 KCLEK 436
K L K
Sbjct: 626 KGLCK 630
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ C+ G + A + + M G D T+N+LV+ LCK GK AEA + + +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D LP +++ LI+ G+ A D++T G P T+ +++K + G
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA +++ + + Y+ L T K GN+ A + EM+ + + P+ + +
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 432 KCLEKKNE 439
L +K +
Sbjct: 696 SGLCRKGK 703
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A+CK G+ +A L EM + PD TY L+S LC+ GK A + E
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 312 -KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ + LP + Y + + K GQ+ F +++ G P I+T A+I Y +GK
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
E+ ++ + ++ + Y++L + K+ ++ + + ++ G+ P+
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 18/285 (6%)
Query: 164 YEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIR 223
YEAM+ H R H N +LV +L KA V + M + G L +
Sbjct: 536 YEAMIL----EGHTRDHFTFN----VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 224 LLIEMFTFTGSFDIVEYVIGKDRRKVNH------YNVLMRAVCKKGDYERAGFLVKEMKR 277
LI + +G + + + + KV H Y L++ +CK G A +K +
Sbjct: 588 CLINGYGNSGE-GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 278 SGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDL 337
D YN L++ +CK+G A+A + + + LP + Y LIS LC+ G+ +
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 706
Query: 338 ARKFLDKITLKG-IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLL 395
A F + +G + P + + + F+ G++ +A Y ++ + + +
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
+ + G + +L EM ++ PN + +N + K+ ++
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+ C G+ A LVK M G D T + +VS L +N +F E+ VL +
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P+ Y LI+ LC+ G A +++ I P + +A++++ + GK +
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA + + + A+++ L L K GN++ A ++ M + GLK + +N
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 165 EAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRL 224
+AMV +LN NHR +++ + K RK + ++N GLC+ I+
Sbjct: 903 DAMVSVLNR-NHRFQE------SRMVLHEMSKQGISPESRKYIGLIN---GLCRVGDIKT 952
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRKVNHYNV----LMRAVCKKGDYERAGFLVKEMKRSGF 280
+F + E +I K+ NV ++RA+ K G + A L++ M +
Sbjct: 953 ---------AFVVKEEMIA---HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Query: 281 DPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF-NYNILISLLCKHGQFDLAR 339
P + ++ L+ CKNG EA + L V + GL + +YN+LI+ LC G LA
Sbjct: 1001 VPTIASFTTLMHLCCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059
Query: 340 KFLDKITLKGIEPCILTHAAVIKS 363
+ +++ G T+ A+I+
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRG 1083
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 248 KVNHY--NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
K+N Y ++L+ A+CK+G E+A ++ G P+ YN ++ C+ G A
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+E +EK P YN LI C+ G+ + A K ++K+ LKG+ P + T+ +I Y
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
++++ + + + + +Y L K +L AQ + +M D+G+ P
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 426 VFN 428
++N
Sbjct: 531 IYN 533
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
LI F G + E + K + K V YN+L+ +K ++++ ++KEM+ +G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLA 338
P++ +Y L++CLCK K EA Q+++ +D G+ PK YN+LI C G+ + A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+F ++ KGIE ++T+ +I GK EA + ++ + K Y+ L +
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ GN+ + EM G+KP +
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 244 KDRRKVNH-------YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY--------- 287
++R K +H +N L++ + K G E A ++KEMK GF PD T+
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 288 --------------------------NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
++L++ LCK GK +A ++L +P E
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
YN +I C+ G AR ++ + +G++P L + +I+ + ELG+ E A + V
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 382 SKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
K S Y++L + +K IL EM D G PN + + CL K +++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++A K D + L MK P + YN+L+ LCK + +A Q+ + +
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
LP YN LI CK G + + K +++ IEP ++T ++K F+ G E
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 372 EAHEYV-----VG--------SASKQSYSSNANY----------------------SLLA 396
+A + +G S YSSN S+L
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K+G + A++IL M KGL PN ++N
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK G+ E++ + + MK +P + T+N L+ L K G +A VL+ +
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM- 310
Query: 312 KDHG-LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
KD G +P F ++IL + + + A + G++ T + ++ + + GK
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
E+A E + +K + Y+ + + +KG+++ A+ + M +G+KP+ +N
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ + G A L+ E+ R G PD+ TYN L+S G + E ++
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y++LISL K G +L + +++LK P +L + V+ Y G E
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDME 682
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A K Y+ L LK G + + ++ EM + ++P +N +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 432 K 432
K
Sbjct: 743 K 743
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
LI+ + TG E ++ + RK V YN L+ G+ +R L +EMKRSG
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG----LPKEFNYNILISLLCKHGQF 335
P + TY+LL+S K G +E E+ G P YN ++ HG
Sbjct: 630 IKPTLKTYHLLISLCTKEG--------IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
+ A ++ K I T+ ++I ++GK E + +++ Y+++
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKK 437
H + + + A EM +KG + + N++ L+++
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEE 783
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 97/188 (51%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ +C G A L+ +M G P+ TY +++ +CK+G+ A A ++L +E+
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ Y+I+I LCKHG D A +++ +KGI I+T+ +I + G++++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ + ++ + +S+L +K+G + A+++ EM+ +G+ P+ + +
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 433 CLEKKNEI 440
K+N +
Sbjct: 377 GFCKENHL 384
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK G A L+++M+ D Y++++ LCK+G A + +E
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
YNILI C G++D K L + + I P ++T + +I S+ + GK
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA E + Y+ L K+ ++ A +++ M+ KG PN FN
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 213 VGGLCQS----SGIRLLIEMFTFTGSFDIVEYVIGKDRRKVN----HYNVLMRAVCKKGD 264
+GG C + G +LL +M +RK+N ++VL+ + K+G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMI----------------KRKINPNVVTFSVLIDSFVKEGK 348
Query: 265 YERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNI 324
A L KEM G PD TY L+ CK +A Q+++ + P +NI
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 325 LISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ 384
LI+ CK + D + K++L+G+ +T+ +I+ + ELGK A E S++
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 385 SYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ Y +L G A +I ++ ++ + ++N +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 86/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++++ +CK G + A L EM+ G ++ TYN+L+ C G++ + ++L +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P +++LI K G+ A + ++ +GI P +T+ ++I + + +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A++ V SK + +++L + K + ++ +M +G+ + +N +
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ +N+L+ CK + L ++M G D TYN L+ C+ GK A ++ +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ P Y IL+ LC +G+ + A + +KI +E I + +I
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K ++A + K Y+++ KKG + A+ + +M + G P+ +N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLE-TVEKDHGLPKEFNYNILISLLCKHGQFDL 337
G++P+ T++ L++ LC G+ +EA ++++ VE H P N L++ LC G+
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK-PDLITINTLVNGLCLSGKEAE 211
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
A +DK+ G +P +T+ V+ + G+ A E + + YS++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 398 LHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K G++ A + EM KG+ N +N
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V ++ L A+ K Y+ L K+M+ G ++ T +++++C C+ K A +
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ K P ++ LI+ LC G+ A + +D++ G +P ++T ++ G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
K EA + + Y + + K G LA ++L +M ++ +K
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+ + + E+F E V K + Y +L+ +C G+ E+A +
Sbjct: 445 IQGFCELGKLNVAKELFQ--------EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+++++S + D+ YN+++ +C K +A + ++ P YNI+I LCK
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
G A K+ G P T+ +I+++ G
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFD-PDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N+L++ CK GD A +V+EMKRSG P+ TY+ L+ CL + + EA ++ E +
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 311 EKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
G+ P +N++I+ C+ G+ + A+K LD + G P + ++A++ + ++GK
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
+EA + Y+ L + G A K+L EM + + +N
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 430 VRKCL 434
+ + L
Sbjct: 379 ILRGL 383
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V +Y+ LM CK G + A E+K++G D Y L++C C+NG+ EA ++L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ YN+++ L G+ + A + LD+ +G+ ++ ++ + G
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ E+A +++ + + + +A ++ L + G + ++L + GL P +
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWG 482
Query: 429 KVRK--CLEKK 437
V + C E+K
Sbjct: 483 AVVESICKERK 493
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 235 FDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS-GFDPDMTTYNLLVSC 293
F++++ VI + + +N + + + G+ + L+ K + G P+ +N+LV
Sbjct: 147 FNLIQ-VIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKH 205
Query: 294 LCKNGKFAEACQVLETVEKDH-GLPKEFNYNILISLLCKHGQFDLARK-FLDKITLKGIE 351
CKNG A V+E +++ P Y+ L+ L H + A + F D I+ +GI
Sbjct: 206 HCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS 265
Query: 352 PCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQK 410
P +T +I + G+ E A + ++ K + N NYS L K G + A++
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKK-ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 411 ILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
E+ GLK + + + C + E
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ + C+ G + A L+++M +PD+ T++ L++ L K GK +EA ++ +
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN +I CK + + A++ LD + K P ++T + +I Y + + +
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E + ++ Y+ L + G++ AQ +L M+ G+ PN+ F +
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 432 KCLEKKNEI 440
L K E+
Sbjct: 294 ASLCSKKEL 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V + LM +C +G +A LV M G P Y +++ LCK G A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+L +E+ H YN +I LCK G A+ ++ KGI P ++T++ +I S+
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
G++ +A + + +Q +S L +K+G + A++I +M+ +G+ P
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 426 VFNKV 430
+N +
Sbjct: 183 TYNSM 187
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK GD E A L+ +M+ + + YN ++ LCK+G A Q L T
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHA-QNLFTEM 102
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
D G+ P Y+ +I C+ G++ A + L + + I P ++T +A+I + + GK
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + + + Y+ + K+ + A+++L M K P+ F+ +
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
M +G PD+ T+ L++ LC G+ +A +++ + ++ P Y +I+ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A L K+ I+ ++ + A+I + G + A K + YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
+ + G A+++L +M+++ + P+ F+ + L K+ ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+L++ +C+ G+ E A L+ E + P++ T++ L+ C GKF EA ++LE +EK
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ P +NILIS L K G+ + L+++ +KG EP T+ V+ + + E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A E + S S +Y + + +++ +L +M++ G P ++ KV +
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 433 CLEKKN 438
C+ KN
Sbjct: 386 CVVSKN 391
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+S + +++ E+ K R V ++ L+R C KG +E A L+
Sbjct: 209 IKGLCESGNLEAALQLLD--------EFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYN-ILISLLCK 331
+ M++ +PD T+N+L+S L K G+ E +LE ++ P Y +L LL K
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 332 HGQFDLARKFLDKITLKGIEPCILTHAAVI 361
+ A++ + ++ G+ P L++ ++
Sbjct: 321 KRNLE-AKEMMSQMISWGMRPSFLSYKKMV 349
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G + D N+L+ LC++G A Q+L+ + P ++ LI C G+F+ A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
K L+++ + IEP +T +I + G+ EE + + K + Y +
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
L K L A++++ +M+ G++P+F + K+
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKM 348
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ + C G + A L++ M +PD+ T++ L++ K K +EA ++ + +
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN +I CK + D A++ LD + KG P ++T + +I Y + + +
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E + ++ Y+ L + G++ AQ +L EM+ G+ P++ F+ +
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 432 KCLEKKNEI 440
L K E+
Sbjct: 228 AGLCSKKEL 236
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
M +S D+ +V LCK+G A + + + P YN +I C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A + L + K I P I+T +A+I ++ + K EA E + + Y+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ K+ + A+++L M KG P+ F+ +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ +C +G A LV +M G D+ TY +V+ +CK G A +L +E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ H P Y+ +I LCK G A+ ++ KGI P + T+ +I + G++
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + ++ ++ L + +K+G + A+K+ EM+ + + P+ +N +
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ +CK G + A +L EM G P++ TYN ++ C G++++A ++L +
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +N LIS K G+ A K D++ + I P +T+ ++I + + +++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A AS + N + ++ + + ++L E+ +GL N + +N +
Sbjct: 419 DAKHMFDLMASPDVVTFNT----IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ + A L +EM G PD T N+L+ C+N K EA ++ E ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
YNI+I +CK + D A + + G+EP + T+ +I +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A+ N+ Y+ L LK G + + +++ EM G +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 252 YNVLMRAVCKKGDYERAGFLVK---EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV-- 306
+N+L++ C D + F + ++ + GF PD+ T+N L+ LC + +EA +
Sbjct: 144 FNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 307 -------LETVE-----KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
LE V + GL P +N LI+ LC G+ A ++K+ KG+
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
++T+ ++ ++G + A + YS + K G+ AQ +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 414 EMMDKGLKPNFSVFN 428
EM++KG+ PN +N
Sbjct: 321 EMLEKGIAPNVFTYN 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 14/227 (6%)
Query: 215 GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKE 274
G C+ + MF S D+V + N ++ C+ + L++E
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTF------------NTIIDVYCRAKRVDEGMQLLRE 457
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
+ R G + TTYN L+ C+ A + + + P NIL+ C++ +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A + + I + I+ + + +I + K +EA + Y++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK-VRKCLEKKNEI 440
+ + K + A + ++M D G +P+ S +N +R CL K EI
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL-KAGEI 623
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +++ +C GD + A +VKEM SG P++ Y L+ +N +F +A +VL+ ++
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F YN LI L K + D AR FL ++ G++P T+ A I Y E ++
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A +YV + + L + KKG ++ A M+D+G+ + + +
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 432 KCLEKKNEI 440
L K +++
Sbjct: 600 NGLFKNDKV 608
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y VL+ K G+ ++A + EM G P++ YN+L+ C++G+ +A ++L+
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ P Y +I CK G A + D++ LKG+ P + ++ L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL----KPNF 424
E A + G+ K SS A ++ L K G L ++L +MD KPN
Sbjct: 747 DVERAIT-IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 425 SVFN 428
+N
Sbjct: 806 VTYN 809
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+VL+ +CK E A L+ EM G D TY+LL+ L K G+ A+A + L
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEM 338
Query: 312 KDHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
HG+ K + Y+ I ++ K G + A+ D + G+ P +A++I+ Y
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ +E +V + S Y + G++ A I+ EM+ G +PN ++ +
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 431 RKCLEKKNEIG 441
K + + G
Sbjct: 459 IKTFLQNSRFG 469
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ CKKG A + M G D TY +L++ L KN K +A ++ +
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P F+Y +LI+ K G A D++ +G+ P ++ + ++ + G+ E+A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
E + + K + + Y + + K G++ A ++ EM KGL P+ V+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 49/254 (19%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFL 271
V G+C S + G+++IV+ +I R V Y L++ + + A +
Sbjct: 424 VKGMCSSGDL---------DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 272 VKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL-ETVEKDHGL-PKEFNYNILISLL 329
+KEMK G PD+ YN L+ L K + EA L E VE +GL P F Y IS
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE--NGLKPNAFTYGAFISGY 532
Query: 330 CKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA--------HEYVVGSA 381
+ +F A K++ ++ G+ P + +I Y + GK EA + ++G A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 382 SKQSYSSNA---------------------------NYSLLATLHLKKGNMLLAQKILYE 414
+ N +Y +L K GNM A I E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 415 MMDKGLKPNFSVFN 428
M+++GL PN ++N
Sbjct: 653 MVEEGLTPNVIIYN 666
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y + + ++ A VKEM+ G P+ L++ CK GK EAC ++
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
L Y +L++ L K+ + D A + ++ KGI P + ++ +I + +LG +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A + ++ + N Y++L + G + A+++L EM KGL PN
Sbjct: 645 KASS-IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ + + K+G E+A L M SG P Y L+ C+ + ++L ++
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K + + + Y ++ +C G D A + ++ G P ++ + +IK++ + ++
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A V+ +Q + + Y+ L K M A+ L EM++ GLKPN
Sbjct: 470 DAMR-VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 107/291 (36%), Gaps = 62/291 (21%)
Query: 187 GFLLVLNLDKASTV--ECVRK-------IMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDI 237
GF + N+ KAS++ E V + I ++L +GG C+S I E+
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML--LGGFCRSGEIEKAKELLD------- 686
Query: 238 VEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKN 297
E + Y ++ CK GD A L EMK G PD Y LV C+
Sbjct: 687 -EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 298 GKFAEACQVLETVEKD--------------------------------------HGLPKE 319
A + T +K G P +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 320 FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
YNI+I LCK G + A++ ++ + P ++T+ +++ Y ++G+ E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 380 SASKQSYSSNANYSLLATLHLKKGN-----MLLAQKILYEMMDKGLKPNFS 425
+ + + YS++ LK+G +L+ Q +D G K + S
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 10/226 (4%)
Query: 202 CVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCK 261
C R ++ + G C+++ R E+F D +E V G R V YN L+ +CK
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIF------DEME-VHGVSRNSVT-YNTLIDGLCK 517
Query: 262 KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
E A L+ +M G PD TYN L++ C+ G +A +++ + + P
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
Y LIS LCK G+ ++A K L I +KGI + VI+ F K EA
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 382 SKQSYSSNA-NYSLL-ATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ +A +Y ++ L G + A L E+++KG P FS
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVG-------------GLCQSSGIRLLIEMFTFTGSFD 236
LV L KA V+ +IMDV+ + G GLC+ ++ +E
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE--------- 351
Query: 237 IVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
+++ +I +D YN L+ +CK+ E A L + + G PD+ T+N L+ LC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
A ++ E + P EF YN+LI LC G+ D A L ++ L G ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
T+ +I + + K EA E ++ Y+ L K + A +++ +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 416 MDKGLKPNFSVFNKV 430
+ +G KP+ +N +
Sbjct: 532 IMEGQKPDKYTYNSL 546
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMK-RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
NV++ CK+G E A ++EM + GF PD T+N LV+ LCK G A ++++ +
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P + YN +IS LCK G+ A + LD++ + P +T+ +I + + + E
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 372 EAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E SK + SL+ L L + N +A ++ EM KG +P+ +N +
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTR-NHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 431 RKCLEKKNEI 440
L K ++
Sbjct: 442 IDSLCSKGKL 451
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ +CK G + A ++ M + G+DPD+ TYN ++S LCK G+ EA +VL+ +
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN LIS LCK Q + A + +T KGI P + T ++I+ +
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A E SK Y++L KG + A +L +M G + +N +
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 2/187 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ ++C KG + A ++K+M+ SG + TYN L+ CK K EA ++ + +E
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 312 KDHGLPK-EFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
HG+ + YN LI LCK + + A + +D++ ++G +P T+ +++ + G
Sbjct: 498 V-HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
++A + V S Y L + K G + +A K+L + KG+ +N V
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 431 RKCLEKK 437
+ L +K
Sbjct: 617 IQGLFRK 623
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 194 LDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYN 253
LD+ T +C + + LC+ + + E+ S I+ V +N
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP--------DVCTFN 404
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
L++ +C ++ A L +EM+ G +PD TYN+L+ LC GK EA +L+ +E
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
YN LI CK + A + D++ + G+ +T+ +I + + E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + + Y+ L T + G++ A I+ M G +P+ +
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFD----IVEYVIGK- 244
++L L ++ + + ++KI++ + +S +LIE + D +V+++I +
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF 148
Query: 245 -DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
+ + YN ++ + + +M G PD++T+N+L+ LC+ + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
+LE + +P E + ++ + G D A + +++ G ++ ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 364 YFELGKYEEAHEYVVGSASKQS-YSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ + G+ E+A ++ +++ + ++ L K G++ A +I+ M+ +G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 423 NFSVFNKVRKCLEKKNEI 440
+ +N V L K E+
Sbjct: 329 DVYTYNSVISGLCKLGEV 346
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ +C +G A LV +M G D+ TY +V+ +CK G A +L +E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ H P Y+ +I LCK G A+ ++ KGI P + T+ +I + G++
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + ++ ++ L + +K+G + A+K+ EM+ + + P+ +N +
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ +CK G + A +L EM G P++ TYN ++ C G++++A ++L +
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +N LIS K G+ A K D++ + I P +T+ ++I + + +++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A AS + N + ++ + + ++L E+ +GL N + +N +
Sbjct: 419 DAKHMFDLMASPDVVTFNT----IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ + A L +EM G PD T N+L+ C+N K EA ++ E ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
YNI+I +CK + D A + + G+EP + T+ +I +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A+ N+ Y+ L LK G + + +++ EM G +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 252 YNVLMRAVCKKGDYERAGFLVK---EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV-- 306
+N+L++ C D + F + ++ + GF PD+ T+N L+ LC + +EA +
Sbjct: 144 FNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 307 -------LETVE-----KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
LE V + GL P +N LI+ LC G+ A ++K+ KG+
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
++T+ ++ ++G + A + YS + K G+ AQ +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 414 EMMDKGLKPNFSVFN 428
EM++KG+ PN +N
Sbjct: 321 EMLEKGIAPNVFTYN 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 14/227 (6%)
Query: 215 GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKE 274
G C+ + MF S D+V + N ++ C+ + L++E
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTF------------NTIIDVYCRAKRVDEGMQLLRE 457
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
+ R G + TTYN L+ C+ A + + + P NIL+ C++ +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A + + I + I+ + + +I + K +EA + Y++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK-VRKCLEKKNEI 440
+ + K + A + ++M D G +P+ S +N +R CL K EI
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL-KAGEI 623
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ LC++ + + +F ++ I R V Y L+ +C G + A L+
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGI--------RPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+ M + PD+ T+N L+ K GKF +A ++ + + P F Y LI+ C
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G D AR+ + KG P ++ + ++I + + K ++A + + K + Y
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ L + G +AQ++ M+ +G+ PN +N + CL
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 237 IVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK 296
+VE I D V Y ++ ++CK G A L +M+ G PD+ Y LV+ LC
Sbjct: 168 MVEMGIKPD---VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 297 NGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
+G++ +A +L + K P +N LI K G+F A + +++ I P I T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+ ++I + G +EA + +K + Y+ L K + A KI YEM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 417 DKGLKPN 423
KGL N
Sbjct: 345 QKGLTGN 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+LM C+ A + +M + GF+PD+ T+ L++ C + EA ++ + +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y +I LCK+G + A D++ GI P ++ + +++ G++ +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A + G ++ ++ L +K+G L A+++ EM+ + PN + +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ C E A +V +M G PD+ Y ++ LCKNG A + + +E
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y L++ LC G++ A L +T + I+P ++T A+I ++ + GK+
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF----SV 426
+A E + + S + N Y+ L +G + A+++ Y M KG P+ S+
Sbjct: 265 DAEE-LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 427 FNKVRKC 433
N KC
Sbjct: 324 INGFCKC 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVN----HYNVLMRAVCKKGDYERA 268
V GLC S R D + G +RK+ +N L+ A K+G + A
Sbjct: 219 VNGLCNSGRWR------------DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
L EM R P++ TY L++ C G EA Q+ +E P Y LI+
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
CK + D A K +++ KG+ +T+ +I+ + ++GK A E S+ +
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 389 NANYSLLATLHLKKGNMLLAQKILYEMMDK---GLKPNFSVFN 428
Y++L G + A I +M + G+ PN +N
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKR---SGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
+ YNVL+ +C G ++A + ++M++ G P++ TYN+L+ LC NGK +A
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
V E + K Y I+I +CK G+ A + KG++P ++T+ +I F
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 366 ELGKYEEAH 374
G EAH
Sbjct: 507 REGLKHEAH 515
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + + + A + K+M G PD+ TY++L+ LC NGK A V E ++
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + YNI+I +CK G+ + ++LKG++P ++T+ ++ + G E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
EA + + Y+ L HL+ G+ + +++ EM
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ + + A LV M G PD+ TY ++V+ LCK G A +L+ +E
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN +I LC + + A ++ KGI P ++T+ ++I+ G++
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + ++ + +S L +K+G ++ A+K+ EM+ + + P+ ++ +
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 8/211 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + + GK V YN ++ A+C + A L
Sbjct: 228 VNGLCKRGDIDLALSLLK--------KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G P++ TYN L+ CLC G++++A ++L + + P ++ LI K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K D++ + I+P I T++++I + + +EA SK + + Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ L K + ++ EM +GL N
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YN L+R +C G + A L+ +M +P++ T++ L+ K GK EA +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + K P F Y+ LI+ C H + D A+ + + K P ++T+ +IK +
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + +E E + + + Y+ L + AQ + +M+ G+ P+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 426 VFN 428
++
Sbjct: 468 TYS 470
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ C A LV +M G+ PD T+N L+ L ++ + +EA +++ +
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y I+++ LCK G DLA L K+ IEP ++ + +I + +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A +K + Y+ L G A ++L +M+++ + PN F+ +
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 433 CLEKKNEI 440
K+ ++
Sbjct: 335 AFVKEGKL 342
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 94/188 (50%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ +C G A L+ M +GF P+ TY ++ +CK+G+ A A ++L +E+
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
Y+I+I LCK G D A +++ +KG + I+ + +I+ + G++++
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ + ++ +S L +K+G + A+++ EM+ +G+ P+ + +
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 433 CLEKKNEI 440
K+N++
Sbjct: 361 GFCKENQL 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 225 LIEMFTFTGSFD-----IVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
LI F + G +D + + + K V ++ L+ K+G A L KEM + G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
PD TY L+ CK + +A +L+ + P +NILI+ CK D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH 399
+ K++L+G+ +T+ +I+ + ELGK E A E S++ +Y +L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 400 LKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
G A +I ++ ++ + ++N
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLE-TVEKDHGLPKEFNYNILISLLCKHGQFDL 337
G++PD T++ L++ LC G+ +EA ++++ VE H P N L++ LC +G+
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK-PTLITLNALVNGLCLNGKVSD 195
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
A +D++ G +P +T+ V+K + G+ A E + ++ YS++
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 398 LHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K G++ A + EM KG K + ++
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 35/208 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFD------------------------------ 281
Y++++ +CK G + A L EM+ GF
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 282 -----PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
PD+ ++ L+ C K GK EA ++ + + + P Y LI CK Q D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A LD + KG P I T +I Y + ++ E + + + Y+ L
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+ G + +A+++ EM+ + ++P+
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDI 457
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ +N+L+ CK + L ++M G D TYN L+ C+ GK A ++ +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ P +Y IL+ LC +G+ + A + +KI +E I + +I
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K ++A + K Y+++ KKG++ A + +M + G PN +N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+ + + E+F E V + R + Y +L+ +C G+ E+A +
Sbjct: 429 IQGFCELGKLEVAKELFQ--------EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+++++S + D+ YN+++ +C K +A + ++ P YNI+I LCK
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYV 377
G A K+ G P T+ +I+++ G ++ + +
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ YN+++ +C + A L + G PD+ TYN+++ LCK G +EA +
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI 345
+E+D P YNILI G + K +++I
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 82/183 (44%)
Query: 239 EYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNG 298
E + R ++ ++ L V + Y+ L K+M+ G ++ T +++++C C+
Sbjct: 62 EMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121
Query: 299 KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
K + A + + K P ++ LI+ LC G+ A + +D++ G +P ++T
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
A++ GK +A + + Y + + K G LA ++L +M ++
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 419 GLK 421
+K
Sbjct: 242 KIK 244
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ + K+G E A LVK + G P++ YN L+ LCK KF EA + + + K
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P + Y+ILI + C+ G+ D A FL ++ G++ + + ++I + + G A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ +K+ + Y+ L + KG + A ++ +EM KG+ P+ F
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 37/208 (17%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ ++CK + A L M + G P+ TY++L+ C+ GK A L +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM- 428
Query: 312 KDHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
D GL + YN LI+ CK G A F+ ++ K +EP ++T+ +++ Y GK
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 371 EEA----HEYVVGSASKQSYS-------------------------------SNANYSLL 395
+A HE + Y+ + Y+++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ ++G+M A + L EM +KG+ P+
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 243 GKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
GKD + V Y L+ +CK ++E ++ EM F P + LV L K GK
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 302 EACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
EA +++ V D G+ P F YN LI LCK +F A D++ G+ P +T++ +
Sbjct: 350 EALNLVKRV-VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 361 IKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
I + GK + A ++ S Y+ L H K G++ A+ + EM++K L
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 421 KPNFSVFNKV 430
+P + +
Sbjct: 469 EPTVVTYTSL 478
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%)
Query: 237 IVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK 296
+ E + K V Y LM C KG +A L EM G P + T+ L+S L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 297 NGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
G +A ++ + + + P YN++I C+ G A +FL ++T KGI P +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+ +I G+ EA +V G + Y+ L ++G + A + EM+
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 417 DKGL 420
+G+
Sbjct: 640 QRGV 643
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 52/290 (17%)
Query: 177 RRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFD 236
RRV G F ++ K S + VR + +L+ GL + L +E+F D
Sbjct: 170 RRVLDGVLVFKMMIT----KVSLLPEVRTLSALLH---GLVKFRHFGLAMELFN-----D 217
Query: 237 IVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK 296
+V I R V Y ++R++C+ D RA ++ M+ +G D ++ YN+L+ LCK
Sbjct: 218 MVSVGI---RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 297 NGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD------------- 343
K EA + + + P Y L+ LCK +F++ + +D
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 344 ----------------------KITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
++ G+ P + + A+I S + K+ EA E +
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRM 393
Query: 382 SKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K N YS+L + ++G + A L EM+D GLK + +N +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VL+ K D + L+KEM G PD Y ++ K G F EA + + +
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA----VIKSYFEL 367
+ +P E Y +I+ LCK G + A K+ P +T+ + K ++
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
K E H ++ K ++ A Y++L ++G + A +++ M+ G+ P+ +
Sbjct: 770 QKAVELHNAIL----KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 428 NKVRKCLEKKNEI 440
+ L ++N++
Sbjct: 826 TTMINELCRRNDV 838
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 206 IMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD-----RRKVNHYNVLMRAVC 260
+ D + ++G +LI+MF G D +G+ + V YN L+ C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
K GD A + EM +P + TY L+ C GK +A ++ + P +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYV 377
+ L+S L + G A K +++ ++P +T+ +I+ Y E G +A E++
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GL ++ IR +++F ++ E+ + +R YNV++ C++GD +A +
Sbjct: 514 LSGLFRAGLIRDAVKLFN-----EMAEWNVKPNRVT---YNVMIEGYCEEGDMSKAFEFL 565
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KEM G PD +Y L+ LC G+ +EA ++ + K + E Y L+ C+
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE-------LGKYEEAHEYVVGSASKQS 385
G+ + A ++ +G++ ++ + +I + G +E H+ +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD-------RGL 678
Query: 386 YSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ Y+ + K G+ A I M+++G PN + V
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+R C++G E A L+ M G PD TY +++ LC+ +A ++ ++
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
+ P YN LI C G+ A + +++ +G+ P
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 66/172 (38%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK G A L +M+ P+ TY + L K + L
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
L YN+LI C+ G+ + A + + ++ G+ P +T+ +I +
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A E K Y+ L G M A ++ EM+ +GL PN
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 202 CVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCK 261
CV ++ + LC+S + +MF G+ + + + + + A C
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL--------KPDAYSFAIFIHAYCD 290
Query: 262 KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
GD A ++ MKR P++ T+N ++ LCKN K +A +L+ + + P +
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
YN +++ C H + + A K L ++ P T+ V+K +G+++ A E G +
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410
Query: 382 SKQSYSSNANYS-LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
++ Y + A Y+ ++ L KKG + A + M+D+G+ P + +R L
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRL 464
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 9/233 (3%)
Query: 203 VRKIMDVLNEV-GGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCK 261
++ +D L+++ LC + E F F IV Y++L+R +
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP--------SAKTYSILVRGWAR 220
Query: 262 KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
D A + EM D+ YN L+ LCK+G ++ + + P ++
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
+ I I C G A K LD++ + P + T +IK+ + K ++A+ +
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 382 SKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
K + Y+ + H + A K+L M P+ +N V K L
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V LC+ + I ++ S +V ++ Y ++ +GD E A ++
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLV--------TYTTILGGYVARGDMESAKRVL 249
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+EM G+ PD TTY +L+ CK G+F+EA V++ +EK+ P E Y ++I LCK
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ AR D++ + P VI + E K +EA NA
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
S L K+G + A+K L++ +KG P+ +N + + +K E+
Sbjct: 370 STLIHWLCKEGRVTEARK-LFDEFEKGSIPSLLTYNTLIAGMCEKGEL 416
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 200 VECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIG---KDRRKVNH--YNV 254
+E +++++ + + G ++ +L++ + G F V+ K+ + N Y V
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
++RA+CK+ A + EM F PD + ++ LC++ K EAC + + K++
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
+P + LI LCK G+ ARK D+ KG P +LT+ +I E G+ EA
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
++ + Y++L K GN+ ++L EM++ G PN + F
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS-GFDPDMTTYNLLVSCLCKNGKFAEAC 304
+R V N L+ + + ++ + K K S G P++ T NLLV LCK A
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
+VL+ + +P Y ++ G + A++ L+++ +G P T+ ++ Y
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+LG++ EA + + + Y ++ K+ A+ + EM+++ P+
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 425 SVFNKV 430
S+ KV
Sbjct: 332 SLCCKV 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 8/216 (3%)
Query: 234 SFDIVEYVIGKDRRKV-------NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTT 286
+FD VE ++ R N + L+R G YE + + + G + +
Sbjct: 98 AFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 287 YNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKI 345
N L++ L +N +F + + ++ G+ P F N+L+ LCK + A K LD+I
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217
Query: 346 TLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNM 405
G+ P ++T+ ++ Y G E A + + Y Y++L + K G
Sbjct: 218 PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRF 277
Query: 406 LLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEIG 441
A ++ +M ++PN + + + L K+ + G
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+ L+ +CK+G A L E ++ G P + TYN L++ +C+ G+ EA ++ + + +
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P F YN+LI L K+G + L+++ G P T + + +LGK E+
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 373 AHEYVV-----GSASKQSY 386
A + V G K+S+
Sbjct: 489 AMKIVSMAVMNGKVDKESW 507
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +C+KG+ AG L +M P+ TYN+L+ L KNG E +VLE +
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
+ P + + IL L K G+ + A K + + G
Sbjct: 463 EIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 236 DIVEYVIGKDRRKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLV 291
D V+ V + RK++ YN L++ CK ++ G L K ++R PD+ TYN L+
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL-PDVVTYNSLI 469
Query: 292 SCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
C++G F A ++L ++ D GL P ++ Y +I LCK + + A D + KG+
Sbjct: 470 DGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 351 EPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQK 410
P ++ + A+I Y + GK +EAH + SK ++ ++ L G + A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 411 ILYEMMDKGLKPNFSV 426
+ +M+ GL+P S
Sbjct: 589 LEEKMVKIGLQPTVST 604
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ ++CK E A L +++ G +P++ Y L+ CK GK EA +LE +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ LP +N LI LC G+ A +K+ G++P + T +I + G ++
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A+ S + Y+ + ++G +L A+ ++ +M + G+ P+ ++ +
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 432 K 432
K
Sbjct: 680 K 680
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
RR Y L+ +C + A L +MK P + TY +L+ LC + + +EA
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+++ +E+ P Y +LI LC +F+ AR+ L ++ KG+ P ++T+ A+I Y
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ G E+A + V S++ + Y+ L + K N+ A +L +M+++ + P+
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 463
Query: 426 VFNKV 430
+N +
Sbjct: 464 TYNSL 468
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y VL++++C A LVKEM+ +G P++ TY +L+ LC KF +A ++L
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + +P YN LI+ CK G + A ++ + + + P T+ +IK Y +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A + ++ Y+ L + GN A ++L M D+GL P+ +
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 429 KVRKCLEKKNEI 440
+ L K +
Sbjct: 502 SMIDSLCKSKRV 513
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ +C G + A L ++M + G P ++T +L+ L K+G F A + +
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
P Y I C+ G+ A + K+ G+ P + T++++IK Y +LG+
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ +L+ + K GD++ A ++M SG PD TY + C+ G+ +A ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL- 367
+ ++ P F Y+ LI GQ + A L ++ G EP T ++IK E+
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 368 -GKYEEAHEYVVGSAS---------------KQSYSSNA-NYSLLATLHLKKGNMLLAQK 410
GK + + + ++ + S + NA +Y L + GN+ +A+K
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 411 ILYEMM-DKGLKPNFSVFNKVRKC---LEKKNE 439
+ M ++G+ P+ VFN + C L+K NE
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ C++ D + A + EM G + Y L+ LC + EA + ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P Y +LI LC + A + ++ GI+P I T+ +I S K+E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E + K + Y+ L + K+G + A ++ M + L PN +N++
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 432 KCLEKKN 438
K K N
Sbjct: 436 KGYCKSN 442
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ ++ + G + + EM P++ TYN +V+ CK G EA Q + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F Y LI C+ D A K +++ LKG + + +I + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA + V + + + Y++L A ++ EM + G+KPN +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YN+++ +CK+GD E A L +EMK G PD TYN ++ K G+ +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
E ++ P YN LI+ CK G+ + +F ++ G++P +++++ ++ ++
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ G ++A ++ V + Y+ L + K GN+ A ++ EM+ G++ N
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 426 VFNKV 430
+ +
Sbjct: 439 TYTAL 443
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK G +EMK +G P++ +Y+ LV CK G +A + +
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P E+ Y LI CK G A + +++ G+E ++T+ A+I + + +
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA E + + A+Y+ L +K NM A ++L E+ +G+KP+ ++
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
K N L+ K G + K+M +G P + TYN+++ C+CK G A +
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
E ++ +P YN +I K G+ D F +++ EP ++T+ A+I + +
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
GK E+ + +YS L K+G M A K +M GL PN
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ A CK G+ A L EM + G + ++ TY L+ LC + EA ++ ++
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P +YN LI K D A + L+++ +GI+P +L + I L K E
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEM 415
A + V+ + +N+ Y+ L + K GN +L EM
Sbjct: 525 AA-KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM A K G+ L+ EMK + + T+ +L+ LCKN ++A +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 312 KDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
D GL + +I LCK Q + A +++ KG+ P + +++ F+ G
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKG-----NMLLAQKILYEMMDKGLKPN 423
EA + + LLA L G + A+ L EM+ +G+ P+
Sbjct: 665 LEAL-----ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ ++ +CK E A L ++M + G PD T Y L+ K G EA + + +
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ Y L+ L Q AR FL+++ +GI P + +V+K ++ELG +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Query: 372 EAHE 375
EA E
Sbjct: 736 EAVE 739
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +C G + A L+++M P++ T+ ++ K GKF+EA ++ E +
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F YN LI+ LC HG+ D A++ LD + KG P ++T+ +I + + + +
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
E + A + Y+ + + + G AQ+I + MD +PN ++
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI-FSRMDS--RPNIRTYS 385
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 206 IMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD----RRKVNHYNVLMRAVCK 261
++ V + + G CQ + + FD ++ V + R V YN ++ CK
Sbjct: 139 VVTVSSLINGFCQGNRV------------FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 262 KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
G A L M+R G D TYN LV+ LC +G++++A +++ + +P
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSA 381
+ +I + K G+F A K +++T + ++P + T+ ++I G+ +EA + +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 382 SKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+K Y+ L K + K+ EM +GL + +N +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R + Y++L+ +C E+A L + M++S + D+TTYN+++ +CK G +A
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
+ ++ P +Y +IS C+ Q+D + K+ G+ P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
++ ++ + K +Y+ L M+ G D+ +YN++++CLC+ +F A V+ +
Sbjct: 71 DFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + LI+ C+ + A + K+ G P ++ + +I ++G
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A E + Y+ L G A +++ +M+ + + PN F V
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN L+ CK + L +EM + G D TYN ++ + G+ +A Q E
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR-PDAAQ--E 370
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ P Y+IL+ LC + + + A + + IE I T+ VI ++G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
E+A + + K +Y+ + + +K + + +M + GL P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 249 VNHYNV--LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
+N NV R +C G YE+A +++EM GF PD +TY+ +++ LC K A +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
E +++ + + Y I++ CK G + ARK+ +++ G P ++T+ A+I +Y +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
K A+E S+ + YS L H K G + A +I M P+ +
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 427 FNK 429
+ K
Sbjct: 626 YFK 628
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 45/273 (16%)
Query: 202 CVRKIMDVLNEVGGLCQSSGIRLLIEMFT-FTGSFDIV-------EYVIGKDRRKVNHYN 253
C+ I+ + G C++ + ++F GS D+ +Y +R V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
L+ CK E A L+ M G +P+ Y+ L+ LCK GK EA Q ++T +
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-QEVKTEMSE 702
Query: 314 HGLPKEFN------------------------------------YNILISLLCKHGQFDL 337
HG P Y +I LCK G+ D
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
A K + + KG +P ++T+ A+I + +GK E E + SK + Y +L
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 398 LHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K G + +A +L EM + + + KV
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 168/432 (38%), Gaps = 74/432 (17%)
Query: 11 RFFSTPHPCTTFLFAHFFSNATPPSTTLFHSPTSCFH---IDDGHSCLKLGLQFLTRRYF 67
RF STP P F F FS + S H +D G+ + + +T+
Sbjct: 40 RFMSTPPPDDMFGFDDPFSPSDSREVVDLTKEYSFLHDSLVDYGNVNVHQVVPIITQ--- 96
Query: 68 SSYPCSSFKGRPYASAKQVSEIVALIREGVNDL-----EFSLNRVNVSLSMALIVEIFHI 122
SS R A A GV+D+ + L + LS +L++E+ +
Sbjct: 97 -----SSIDARAIADAVS----------GVDDVFGRKSQKFLRQFREKLSESLVIEVLRL 141
Query: 123 LASERVSA-LQFFHWLKGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHL 181
+A R SA + FF W QI Y+ P+ N
Sbjct: 142 IA--RPSAVISFFVW---------AGRQIG------------YKHTAPVYN--------- 169
Query: 182 GRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYV 241
A L+V + D+ E +++I D EV G + +L+ GSF I
Sbjct: 170 ---ALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG----EFLNVLVRKHCRNGSFSIALEE 222
Query: 242 IG--KD---RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK 296
+G KD R + YN L++A K + A + +EM + D T LCK
Sbjct: 223 LGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCK 282
Query: 297 NGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
GK+ EA L VE ++ +P Y LIS LC+ F+ A FL+++ P ++T
Sbjct: 283 VGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
++ ++ + + + Y S ++ L + G+ A K+L +M+
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 417 DKGLKPNFSVFN 428
G P + V+N
Sbjct: 400 KCGHMPGYVVYN 411
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDM----------------TTYNLLVSCLC 295
Y+ L+ CK G E+A + + M S PD+ TY L+ C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
K+ + EA ++L+ + + P + Y+ LI LCK G+ D A++ +++ G +
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
T++++I YF++ + + A + + + Y+ + K G A K++ M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 416 MDKGLKPN----------FSVFNKVRKCLEKKNEIG 441
+KG +PN F + K+ CLE +G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 41/220 (18%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVS------------------- 292
+N L+ A C GD+ A L+K+M + G P YN+L+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 293 ----------------------CLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
CLC GK+ +A V+ + +P Y+ +++ LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
+ +LA +++ G+ + T+ ++ S+ + G E+A ++ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
Y+ L +LK + A ++ M+ +G PN ++ +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 48/287 (16%)
Query: 199 TVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH------- 251
++ R++ D + ++G +L+ + G +E +G R V+
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK---LEDALGMLERMVSEFKVNPDN 240
Query: 252 --YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
YN +++A+ KKG L+ +MK++G P+ TYN LV CK G EA Q++E
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG- 368
+++ + LP YNILI+ LC G + +D + ++P ++T+ +I FELG
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 369 ---------------------------KY---EEAHEYVVGSASK----QSYSSN-ANYS 393
K+ EE E V + +S + Y
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
L +LK G++ A +++ EM KG+K N N + L K+ ++
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 222 IRLLIEMFTFTGSFDIVEYVIGKDRRKVNH--YNVLMRAVCKKGDYERAGFLVKEMKRSG 279
I+ +++ +G+ +++ +G+ K+N N ++ A+CK+ + A L+ + G
Sbjct: 423 IKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
F D TY L+ + K +A ++ + ++K P +N LI LC HG+ +LA
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEY 376
+ D++ G+ P T ++I Y + G+ E+A E+
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 35/288 (12%)
Query: 178 RVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNE-------VGGLCQSSGIRLLIEMFT 230
RV +G+ + +L +A + + K +VL + + GLC + +R +E+
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 231 FTGSF----DIVEY---------------------VIGKDRRKVNH--YNVLMRAVCKKG 263
S D+V Y + D K N +N+ ++ +CK+
Sbjct: 335 AMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394
Query: 264 DYERAGFLVKEM-KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNY 322
E VKE+ GF PD+ TY+ L+ K G + A +++ + +
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 323 NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSAS 382
N ++ LCK + D A L+ +G +T+ +I +F K E+A E
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 383 KQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + + ++ L G LA + E+ + GL P+ S FN +
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ ++ E+A + EMK+ P ++T+N L+ LC +GK A + + +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ LP + +N +I CK G+ + A +F ++ +P T ++ + G E
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A + + ++ Y+ + + K + A +L EM +KGL+P+ +N
Sbjct: 609 KALNF-FNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ +N L+ +C G E A E+ SG PD +T+N ++ CK G+ +A +
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
K P + NIL++ LCK G + A F + + ++ E +T+ +I ++ +
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDK 639
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKIL 412
K +EA++ + K Y+ +L ++ G + ++L
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNVL+ +CKKGD R LV M G P+ TYN L+ LC GK +A +LE +
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P + Y LI+ L K + A + L + +G ++ +I F+ GK E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA A K + YS+L ++G A++IL M+ G PN ++ +
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 432 K 432
K
Sbjct: 440 K 440
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM +CK+ + A L+ EM+ G P YN+L+ LCK G ++++ +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P E YN LI LC G+ D A L+++ P +T+ +I + +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A ++ S ++ Y N + YS+L + K+G A + +M +KG KPN V++
Sbjct: 345 DAVR-LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N++++A+CK +RA + + M PD TY L+ LCK + EA +L+ ++
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN+LI LCK G K +D + LKG P +T+ +I GK +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A + S + ++ Y L +K+ A ++L M ++G N +++
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+VL+ +C++G A ++ M SG P+ TY+ L+ K G EA QV + ++
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K +F Y++LI LC G+ A K+ GI+P + ++++IK +G +
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 372 EA----HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
A HE + K S Y++L + ++ A +L M+D+G P+
Sbjct: 520 AALKLYHEMLCQEEPK-SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 428 NKVRKCLEKKN 438
N L +K+
Sbjct: 579 NTFLNTLSEKS 589
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + K+ A L+ M+ G+ + Y++L+S L K GK EA + +
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y++L+ LC+ G+ + A++ L+++ G P T+++++K +F+ G E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + V K S N YS+L G + A + +M+ G+KP+ ++ +
Sbjct: 450 EAVQ-VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 431 RKCL 434
K L
Sbjct: 509 IKGL 512
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 4/182 (2%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERA----GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
+R V +N ++ + +G Y R ++V P+ ++NL++ LCK
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
A +V + + LP + Y L+ LCK + D A LD++ +G P + + +I
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+ G + V K + Y+ L KG + A +L M+
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 422 PN 423
PN
Sbjct: 325 PN 326
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 252 YNVLMRAVCKKG-DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN ++ A K G ++++ EM+R+G PD T+N L++ +C G EA + L
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFDE 364
Query: 311 EKDHGLPKE-FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ + ++ F+YN L+ +CK GQ DLA + L ++ +K I P +++++ VI + + G+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 370 YEEA------HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
++EA Y+ + + SY++ L +++ K G A IL EM G+K +
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNT------LLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 424 FSVFNKV 430
+N +
Sbjct: 479 VVTYNAL 485
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+ ++ K G ++ A L EM+ G D +YN L+S K G+ EA +L
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 309 TVEKDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ G+ K+ YN L+ K G++D +K ++ + + P +LT++ +I Y +
Sbjct: 469 EM-ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
G Y+EA E S + YS L K G + A ++ EM +G+ PN +
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 428 NKV 430
N +
Sbjct: 588 NSI 590
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
++ V YN L+ K+G Y+ + EMKR P++ TY+ L+ K G + EA +
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 306 VLETVEKDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
+ K GL + Y+ LI LCK+G A +D++T +GI P ++T+ ++I ++
Sbjct: 536 IFREF-KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLL 407
+ + +Y G + +SS+A L+ L +GN ++
Sbjct: 595 GRSATMDRSADYSNGGS--LPFSSSA----LSALTETEGNRVI 631
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A+CK G + A ++ +M P++ +Y+ ++ K G+F EA + +
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+YN L+S+ K G+ + A L ++ GI+ ++T+ A++ Y + GKY+
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E + + + YS L + K G A +I E GL+ + +++ +
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 432 KCLEKKNEIG 441
L K +G
Sbjct: 557 DALCKNGLVG 566
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGD-YERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ AVC +G +E A L EM + D+ +YN L+ +CK G+ A ++L +
Sbjct: 342 FNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+P +Y+ +I K G+FD A ++ GI +++ ++ Y ++G+
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EEA + + AS Y+ L + K+G +K+ EM + + PN ++ +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 239 EYVIGKDRRKVNHYNVLMRAVCKKGDYER---AGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
E+ + ++RRK + + G Y + A + + G+ + ++ L+S
Sbjct: 220 EFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYG 279
Query: 296 KNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHG-QFDLARKFLDKITLKGIEPC 353
++G EA V ++ K++GL P YN +I K G +F KF D++ G++P
Sbjct: 280 RSGLHEEAISVFNSM-KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPD 338
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
+T +++ G +E A +++ +Y+ L K G M LA +IL
Sbjct: 339 RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 414 EMMDKGLKPNFSVFNKV 430
+M K + PN ++ V
Sbjct: 399 QMPVKRIMPNVVSYSTV 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 164 YEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGI- 222
++ + + E + + L R ++ LL + + E +D+L E+ + +
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA----LDILREMASVGIKKDVV 480
Query: 223 --RLLIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEM 275
L+ + G +D V+ V + +R+ + Y+ L+ K G Y+ A + +E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 276 KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
K +G D+ Y+ L+ LCKNG A +++ + K+ P YN +I +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 336 DLARKFLDKITL 347
D + + + +L
Sbjct: 601 DRSADYSNGGSL 612
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ + + A F ++EM ++G P + +YN+L+ LCK GKF EA ++ + +
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ P Y+IL+ LC+ + DLA + + G+E ++ H +I +GK ++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A + + ++ Y+ L K G+ A I M GL+P+ +N + K
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 433 CL 434
L
Sbjct: 648 GL 649
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 193 NLDKASTV----ECVRKIMDVLN---EVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD 245
N+DKA +V + + +DV+ +GG C+ I+ +E++ I+E+ K+
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR------IMEH---KN 355
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
+ YN+L++ + + G + A + + M G+ D TTY + + LC NG +A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
V++ VE G + Y +I LCK + + A + +++ G+E A+I
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ EA ++ + +Y++L K G A + EM++ G KP+
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 426 VFN 428
++
Sbjct: 536 TYS 538
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 242 IGKD--RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK 299
+GK+ R V YN+L+ +CK G + A VKEM +G+ PD+ TY++L+ LC++ K
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 300 FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
A ++ + +NILI LC G+ D A + + + ++T+
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 360 VIKSYFELGKYEEA 373
+++ +F++G A
Sbjct: 610 LMEGFFKVGDSNRA 623
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNVL++ CKK ++E+A + M + GF PD+ +Y+ +++ L K GK +A ++ + +
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDK-ITLKGIEPCILTHAAVIKSYFELGKY 370
+ P YNILI K A + D+ + + P + TH +I + G+
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLH--LKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ + + KQ+ Y+ + +H GN+ A+ + E+ ++ + +N
Sbjct: 272 DDCLK--IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ YN L+ A + + + L + +G P++ TYN+L+ CK +F +A L+
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ K+ P F+Y+ +I+ L K G+ D A + D+++ +G+ P + + +I + +
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 369 KYEEAHE 375
++ A E
Sbjct: 234 DHKTAME 240
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G +P + +YN L++ + ++ + + E P YN+LI + CK +F+ A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
R FLD + +G +P + +++ VI + GK ++A E + + Y++L
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 399 HLKKGNMLLAQKILYEMM-DKGLKPNFSVFN 428
LK+ + A ++ ++ D + PN N
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ +C G+ ++A + E+ D+ TYN ++ C+ GK E+ ++ +E
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + +YNILI L ++G+ D A + KG T+ I G
Sbjct: 353 HKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A + S + Y+ + KK + A ++ EM G++ N V N +
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 432 KCLEKKNEIG 441
L + + +G
Sbjct: 472 GGLIRDSRLG 481
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 187 GFLLVLNLDKASTV-------ECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVE 239
GF + LDKA + +C ++ + G C+S + E+F +V
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 240 YVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK 299
+ Y L++ + GD + A + K+M G PD+ TY++L+ LC NGK
Sbjct: 434 DTV--------TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 300 FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
+A +V + ++K + Y +I +CK G+ D ++LKG++P ++T+
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 360 VIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
+I +EA+ + ++ Y+ L HL+ G+ + +++ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ L+ +C G + A L+ +M +P++ T+N L+ K GKF EA +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + K P F YN L++ C H + D A++ + + K P ++T+ +IK +
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + E+ E + + Y+ L G+ AQK+ +M+ G+ P+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 426 VFN 428
++
Sbjct: 472 TYS 474
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ L + + + I V+ +N ++ ++CK + A L
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVV--------IFNTIIDSLCKYRHVDDALNLF 283
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KEM+ G P++ TY+ L+SCLC G++++A Q+L + + P +N LI K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+F A K D + + I+P I T+ +++ + + ++A + SK + Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGL 420
+ L K + ++ EM +GL
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGL 431
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y V++ +CK+GD + A L+ +M+ + + D+ +N ++ LCK +A + + +E
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y+ LIS LC +G++ A + L + K I P ++T A+I ++ + GK+
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + K+S + Y+ L + A+++ M+ K P+ +N +
Sbjct: 348 EA-EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 431 RK--CLEKKNEIG 441
K C K+ E G
Sbjct: 407 IKGFCKSKRVEDG 419
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y ++++ LCK G DLA L+K+ IE ++ +I S + ++A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+K + YS L + G A ++L +M++K + PN FN +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 11/214 (5%)
Query: 225 LIEMFTFTGSF--------DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMK 276
LI+ F G F D+++ I D + YN L+ C ++A + + M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPD---IFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
PD+ TYN L+ CK+ + + ++ + + Y LI L G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A+K ++ G+ P I+T++ ++ GK E+A E + Y+ +
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K G + + + KG+KPN +N +
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ A+ K ++ L ++M+R + TYN+L++C C+ + + A +L +
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ G P +T +I F K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V + + Y ++ K+G+ LA +L +M ++ + +FN +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 282 PDMTTYNLLVSCLCKNGKF------AEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
P + +N L+S + K KF E Q LE V HGL + YNILI+ C+ Q
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV---HGL---YTYNILINCFCRRSQI 136
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
LA L K+ G EP I+T ++++ Y + +A V ++ L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 396 AT---LHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
LH K A ++ M+ +G +PN + V L K+ +
Sbjct: 197 IHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKD--RRKVNHYNVLMRAVCKKGDYERAGF 270
+ GLC++ + +E+F Y + K R YN L+ + G + A
Sbjct: 191 INGLCKNRDLNNALEVF----------YCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L+++M + DP++ + L+ K G EA + + + + +P F YN LI+ C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
HG A+ D + KG P ++T+ +I + + + E+ + +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
Y+ L + + G + +AQK+ M+D G+ P+ +N + CL +I
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 213 VGGLCQS----SGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+ G C+S G++L EM T+ G ++G YN L+ C+ G A
Sbjct: 331 ITGFCKSKRVEDGMKLFCEM-TYQG-------LVGD----AFTYNTLIHGYCQAGKLNVA 378
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
+ M G PD+ TYN+L+ CLC NGK +A ++E ++K YNI+I
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
LC+ + A +T KG++P + + +I G EA +
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 235 FDIVEYVIGK-DRRKVNH----YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNL 289
FDIV Y+ K + ++H + +L+ C+ A L+ +M + GF P + T
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
L++ C+ +F EA ++++++ +P YN +I+ LCK+ + A + + KG
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 350 IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQ 409
I +T+ +I G++ +A + ++ + ++ L +K+GN+L A+
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 410 KILYEMMDKGLKPNFSVFNKV 430
+ EM+ + + PN +N +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSL 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C+ ++ A LV M GF P++ YN +++ LCKN A +V +EK
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
YN LIS L G++ A + L + + I+P ++ A+I ++ + G EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK-- 432
+ + Y+ L G + A+ + M+ KG P+ +N +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 433 CLEKKNEIG 441
C K+ E G
Sbjct: 335 CKSKRVEDG 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G CQ+ + + ++F +V+ + D + YN+L+ +C G E+A +V
Sbjct: 366 IHGYCQAGKLNVAQKVFN-----RMVDCGVSPD---IVTYNILLDCLCNNGKIEKALVMV 417
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+++++S D D+ TYN+++ LC+ K EA + ++ + P Y +IS LC+
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
G A K ++ G P + ++ ++
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+LM CK+G+ A + E+ + P + ++N L++ CK G E ++ +E
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P F Y+ LI+ LCK + D A D++ +G+ P + +I + G+ +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
E SK Y+ L K G+++ A+ I+ M+ +GL+P+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ CK GD A +V M R G PD TY L+ C+ G A ++ + ++
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ ++ L+ +CK G+ A + L ++ GI+P +T+ ++ ++ + G +
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + S S Y++L K G M A +L M++ G+ P+ +N +
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 35/226 (15%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK-------FA 301
V +N L+ CK G+ + L +M++S PD+ TY+ L++ LCK K F
Sbjct: 275 VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFD 334
Query: 302 EACQ--------VLETVEKDHGLPKEFN--------------------YNILISLLCKHG 333
E C+ + T+ H E + YN L++ CK+G
Sbjct: 335 EMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYS 393
AR +D + +G+ P +T+ +I + G E A E +S
Sbjct: 395 DLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS 454
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
L K+G ++ A++ L EM+ G+KP+ + + KK +
Sbjct: 455 ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 252 YNVLMRAVCKKG---DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
++ L+ +CK+G D ERA ++EM R+G PD TY +++ CK G ++L+
Sbjct: 453 FSALVCGMCKEGRVIDAERA---LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
++ D +P YN+L++ LCK GQ A LD + G+ P +T+ +++ +
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 78/157 (49%)
Query: 274 EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHG 333
E+ +GF ++ +N+L++ CK G ++A +V + + K P ++N LI+ CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYS 393
D + ++ P + T++A+I + + K + AH + ++ ++
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
L H + G + L ++ +M+ KGL+P+ ++N +
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 313 DHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D G P + +NIL++ CK G A+K D+IT + ++P +++ +I Y ++G +
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E ++ YS L K+ M A + EM +GL PN +F +
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 432 KCLEKKNEI 440
+ EI
Sbjct: 353 HGHSRNGEI 361
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + D + A + K+M G PD+ TYN+L+ LC NG A V E ++
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K Y +I LCK G+ + ++LKG++P ++T+ ++ + G E
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA V ++ Y+ L L+ G+ + +++ EM G + S F V
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573
Query: 432 KCL 434
L
Sbjct: 574 NML 576
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
GK V YN ++ +CK + A L +M+ G PD+ TYN L+SCLC G++++
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDK-ITLKGIEPCILTHAAVI 361
A ++L + + + P +N LI K G+ A K D+ + K P ++ + +I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
K + + + EE E + + + Y+ L + + AQ + +M+ G+
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 422 PNFSVFN 428
P+ +N
Sbjct: 424 PDIMTYN 430
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+G+ + A L+ +M++ + D+ YN ++ LCK +A + +E
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F YN LIS LC +G++ A + L + K I P ++ A+I ++ + GK
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 372 EAHE-YVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA + Y SK + Y+ L K + ++ EM +GL N
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ C A LV +M G+ PD T+ LV L ++ K +EA ++E +
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y +I+ LCK G+ DLA L+K+ IE ++ + +I + ++
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A + +K Y+ L + G A ++L +M++K + P+ FN +
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 433 CLEKKNEI 440
K+ ++
Sbjct: 329 AFVKEGKL 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL-ETV 310
YN L+ +C G + A L+ +M +PD+ +N L+ K GK EA ++ E V
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ H P YN LI CK+ + + + +++ +G+ +T+ +I +F+
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ A S + Y++L GN+ A + M + +K + + +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 431 RKCLEKKNEI 440
+ L K ++
Sbjct: 468 IEALCKAGKV 477
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ CK E + +EM + G + TY L+ + A V + +
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P YNIL+ LC +G + A + + + ++ I+T+ +I++ + GK E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK-V 430
+ + + K + Y+ + + +KG A + EM + G PN +N +
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 431 RKCLEKKNE 439
R L +E
Sbjct: 539 RARLRDGDE 547
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++ + C++ A ++ +M + G+ P + T N L++ C + +EA +++ +
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + L+ L +H + A ++++ +KG +P ++T+ AVI + G+ +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + + Y+ + K +M A + +M KG+KP+ +N +
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 432 KCL 434
CL
Sbjct: 293 SCL 295
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 143/373 (38%), Gaps = 46/373 (12%)
Query: 97 VNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPELCCDPQIXXXXXX 156
V LE +LN V L LI + + +FF W P C ++
Sbjct: 97 VPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVW-AAKQPRYCHSIEVYKSMVK 155
Query: 157 XXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEV--- 213
+ A+ ++ E L L V+ + + ++ + V+K ++VL+E+
Sbjct: 156 ILSKMRQFGAVWGLIEEMRKENPQLIEPE---LFVVLVQRFASADMVKKAIEVLDEMPKF 212
Query: 214 -------------GGLCQSSGIRLLIEMFT------------FT---------GSFDIVE 239
LC+ ++ ++F FT G +
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 240 YVIGKDRR-----KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL 294
YV+ + + Y L+ G A L+++M+R GF+P+ Y +L+ L
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
CK + EA +V +E+ Y L+S CK G+ D LD + KG+ P
Sbjct: 333 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 392
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
LT+ ++ ++ + +EE E + + + Y+++ L K G + A ++ E
Sbjct: 393 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 452
Query: 415 MMDKGLKPNFSVF 427
M + GL P F
Sbjct: 453 MEENGLSPGVDTF 465
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 37/208 (17%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
N Y VL++A+CK E A + EM+R + D+ TY LVS CK GK + VL+
Sbjct: 322 ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLD 381
Query: 309 TVEKDHGLPKEFNY-----------------------------------NILISLLCKHG 333
+ K +P E Y N++I L CK G
Sbjct: 382 DMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG 441
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ--SYSSNAN 391
+ A + +++ G+ P + T +I G EA ++ ++ S S
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGT 501
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKG 419
LL LK + +A+ + + KG
Sbjct: 502 LKLLLNTVLKDKKLEMAKDVWSCITSKG 529
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
++N L+R+ G ++ + L + MK+ G P + T+N L+S L K G+ A + + +
Sbjct: 140 YFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 311 EKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ +G+ P + +N LI+ CK+ D A + + L P ++T+ +I GK
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 370 YEEAHEYVVGSASKQS--YSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ AH + G K + + + +Y+ L + K + A + ++M+ +GLKPN +
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 428 NKVRKCLEK 436
N + K L +
Sbjct: 320 NTLIKGLSE 328
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ CK + A + K+M+ +PD+ TYN ++ LC+ GK A VL +
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 312 KDHG--LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K P +Y L+ C + D A + +G++P +T+ +IK E +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 370 YEEAHEYVVGSASK-QSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
Y+E + ++G +++ +A +++L H G++ A K+ EM++ L P+ + +
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 428 NKVRKCLEKKNE 439
+ + + L +NE
Sbjct: 392 SVLIRTLCMRNE 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV- 310
+N+L++A C G + A + +EM PD +Y++L+ LC +F A + +
Sbjct: 356 FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELF 415
Query: 311 ------EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
KD P YN + LC +G+ A K ++ +G++ ++ +I +
Sbjct: 416 EKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGH 474
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
GK++ A+E +V ++ Y LL LK G LLA L M+ P
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 425 SVFNKVRKCLEKK 437
+ F+ V L K+
Sbjct: 535 TTFHSVLAELAKR 547
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSG------FDPDMTTYNLLVSCLCKNGKFAEACQ 305
YN L++ + + Y+ +K++ G F PD T+N+L+ C G A +
Sbjct: 319 YNTLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR----KFLDKITLKGIEPCILTHAAVI 361
V + + P +Y++LI LC +FD A + +K L G + C AA
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK-PLAAAY 433
Query: 362 KSYFEL----GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMD 417
FE GK ++A E V K+ +Y L T H ++G A ++L M+
Sbjct: 434 NPMFEYLCANGKTKQA-EKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 418 KGLKPNFSVF 427
+ P+ +
Sbjct: 493 REFVPDLETY 502
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 62/292 (21%)
Query: 182 GRNAFGFLLVLNLDKASTVEC--------VRKIMDVLN---EVGGLCQSSGIR----LLI 226
G N F +LL + +S + + ++DV + + G C++ I LLI
Sbjct: 128 GSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 227 EMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM----------- 275
E+ F S ++V Y L+ CKKG+ E+A L EM
Sbjct: 188 ELTEFGFSPNVV------------IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 276 -------------KRSGFD-----------PDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
K+ GF+ P++ TYN +++ LCK+G+ +A QV + +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ YN LI LC+ + + A K +D++ GI P ++T+ +I + +GK
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A S+ S Y++L + +KG+ A K++ EM ++G+KP+
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ C+KGD A +VKEM+ G P TY +L+ ++ +A Q+ ++E
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P Y++LI C GQ + A + + K EP + + +I Y + G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + K+ + A+Y + + K+ A++++ +M+D G+ P+ S+ + +
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Query: 432 K 432
+
Sbjct: 556 R 556
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C G +A L +++K G P + TYN+LVS C+ G + A ++++ +E
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + Y ILI + + A + + G+ P + T++ +I + G+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA K + Y+ + + K+G+ A K+L EM +K L PN + + +
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 432 K--CLEKKNE 439
+ C E+K++
Sbjct: 521 EVLCKERKSK 530
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +M +CK G + A + EM+ G ++ TYN L+ LC+ K EA +V++ ++
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P YN LI C G+ A + +G+ P ++T+ ++ + G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A + V + S Y++L + NM A ++ M + GL P+ ++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ Y+VL+ C KG A L K M +P+ YN ++ CK G A ++L+
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
+E+ P +Y +I +LCK + A + ++K+ GI+P
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +L++ C+KG A L EM + G D+ TYN ++ LCK EA ++ +
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + ILI CK G A + K+ K I ++T+ ++ + ++G +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A E SK+ + +YS+L KG++ A ++ EM+ K +KP + N +
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 432 K 432
K
Sbjct: 593 K 593
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+++ A+CK G E+ G + +++ G PD+ TYN L+S G EA +++ +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P + YN +I+ LCKHG+++ A++ ++ G+ P T+ +++ + G E
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ S+ +S + +L + GN+ A + + GL P+ ++
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
++ N L+ ++ + G E A + +E+ RSG ++ T N++V+ LCK+GK + L
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
V++ P YN LIS G + A + ++ + KG P + T+ VI + G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
KYE A E + Y L KKG+++ +K+ +M + + P+ F+
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 429 KV 430
+
Sbjct: 380 SM 381
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A KG E A L+ M GF P + TYN +++ LCK+GK+ A +V +
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y L+ CK G K + + + P ++ ++++ + G +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A Y N Y++L + +KG + +A + EM+ +G + +N +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 432 KCLEKKNEIG 441
L K+ +G
Sbjct: 453 HGLCKRKMLG 462
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+L+ CK G+ + A L ++MK D+ TYN L+ K G A ++ +
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
LP +Y+IL++ LC G A + D++ K I+P ++ ++IK Y G +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK--GLKPNFSVFNKVR 431
++ S+ +Y+ L +++ NM A ++ +M ++ GL P+ +N +
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 432 KCLEKKNEI 440
++N++
Sbjct: 665 HGFCRQNQM 673
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+++L+R + A ++ GF + N L+ L + G A V + +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + NI+++ LCK G+ + FL ++ KG+ P I+T+ +I +Y G E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA E + K Y+ + K G A+++ EM+ GL P+ + +
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YN L+ K GD + A + +M P +Y++LV+ LC G AEA +
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
V + + + P N +I C+ G FL+K+ +G P +++ +I +
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH--LKKGNMLLAQKILYEMMDKGLKPN 423
+A V +Q ++ + LH ++ M A+ +L +M+++G+ P+
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 424 FSVF 427
S +
Sbjct: 692 RSTY 695
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 82/189 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ CKKGD + +M+ PD+ ++ ++S ++G +A +V+
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P Y ILI C+ G +A +++ +G ++T+ ++ +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + + + + ++L H K GN+ A ++ +M +K ++ + +N +
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 432 KCLEKKNEI 440
K +I
Sbjct: 523 DGFGKVGDI 531
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N +++ C+ G+ +++M GF PD +YN L+ + ++A +++ +E+
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 313 DHG--LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ G +P F YN ++ C+ Q A L K+ +G+ P T+ +I +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 371 EEA 373
EA
Sbjct: 709 TEA 711
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV++ K + A M G +PD T+N L+ C CK+G+ A ++ E +E
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ LP YNI+I+ ++D ++ L K+ +GI P ++TH ++ Y + G++
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A E + S S+ Y+ L + ++G A M GLKP+ N +
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 224 LLIEMFTFTGSFDIVEYVI-----GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
LLI+ + G ++ V+ G + ++ L+ +G++++ ++KEMK
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G PD YN+++ K A + + + P +N LI CKHG+ +A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+ + + +G PC T+ +I SY + ++++ + S+ + ++ L +
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ K G A + L EM GLKP+ +++N +
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
+ YN L++ K G + A +V EM++ G PD TY+LL+ G++ A VL
Sbjct: 338 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ +E P F ++ L++ G++ + L ++ G++P + VI ++ +
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ A S+ ++ L H K G ++A+++ M +G P + +
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 428 N 428
N
Sbjct: 518 N 518
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL----------------- 294
YN L+ A + D E+A L+ +M++ G+ D Y+L++ L
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 295 --------------------CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
K+G ++A Q+L + K +IS L G+
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-NYS 393
A +++ GI+P + A++K Y + G ++A E +V K+ S + YS
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA-ESMVSEMEKRGVSPDEHTYS 378
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
LL ++ G A+ +L EM ++PN VF+++ + E
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 15/226 (6%)
Query: 224 LLIEMFTFTGSFDIVEYV-----IGKDRRK--VNHYNVLMRAVCKKGDYERAGFLVKEMK 276
L+I+ T + D V + I +D+ + V N ++ K GD +A L+ +
Sbjct: 237 LVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQ 296
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
+G T ++S L +G+ EA + E + + P+ YN L+ K G
Sbjct: 297 ATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLK 356
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH----EYVVGSASKQSYSSNANY 392
A + ++ +G+ P T++ +I +Y G++E A E G S+ +
Sbjct: 357 DAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV----F 412
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKN 438
S L +G ++L EM G+KP+ +N V K N
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 79/179 (44%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
++ A+ G A L +E+++SG P YN L+ K G +A ++ +EK
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P E Y++LI G+++ AR L ++ ++P + ++ + + G++++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKC 433
+ + S Y+++ K + A M+ +G++P+ +N + C
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ + + ++ L+ +MK G P++ T+ LV K+G+F +A + LE ++
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN LI+ + G + A +T G++P +L ++I ++ E +
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + Y+ L ++ + EM+ G KP+ + +R
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 432 KCL 434
L
Sbjct: 697 SAL 699
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL---- 307
YN L+ +C+ G+ E A L +EM PD+ TY LV KNG + A +V
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 308 --------------------------------ETVEKDHGLPKEFNYNILISLLCKHGQF 335
E V DH P YN+ I LCK G
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
A +F KI G+ P +T+ VI+ Y E G+++ A K+ Y S Y +L
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
H K G + A + EM +G++PN N +
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ K G E A +M+RSGF ++N L+ CK G F +A V + +
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFL----------------------------- 342
P YNI I LC G+ D AR+ L
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 343 --DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
D + I P I+T+ +I E G E A ++ + Y+ L +
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 401 KKGNMLLAQKILYEMMDKGLKPN 423
K GN+ +A ++ EM+ KG+KP+
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPD 478
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV + +CK G+ +A +++ R G PD TY ++ +NG+F A + + +
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y +LI K G+ + A ++ ++ +G+ P ++TH A++ + G +
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA+ Y+ + + +Y++L + + K+ EM+DK ++P+ +
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Query: 432 KCLEKKNE 439
K LEK +E
Sbjct: 698 KHLEKDHE 705
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N ++ + K GD ER + EMKR + TYN+L++ KNGK EA + +
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +++N LI CK G FD A D++ GI P T+ I + + G+ +
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A E + A+ S Y+ L ++K G + A + ++ + P+ +N +
Sbjct: 361 DARELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN LM K G + A L +++ P + TYN L+ LC++G A ++ E
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ P Y L+ K+G +A + D++ KGI+P + LG
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Query: 369 KYEEA---HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
++A HE +V A+ Y++ K GN++ A + ++ GL P+
Sbjct: 494 DSDKAFRLHEEMV--ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 426 VFNKV 430
+ V
Sbjct: 552 TYTTV 556
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+NVL+ K G+ A + +M G PD+ T+ L+ C+ G+ ++ ++ E +
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F Y+ILI+ LC + AR+ L ++ K I P + VI + + GK
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA+ V K+ +++L H KG M A I ++M+ G P+ + +
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 432 KCLEK 436
CL K
Sbjct: 495 SCLLK 499
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGF-DPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN L++ CK + +A + K++K PD+ TY ++S CK GK EA +L+ +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ P +N+L+ K G+ A + K+ G P ++T ++I Y +G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ ++ + + YS+L + +L A+++L ++ K + P ++N V
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+R +C G E+A L+ M G +PD+ TYN L+ CK+ + +A ++ + V+
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
P Y +IS CK G+ A LD + GI P +T ++ Y + G+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A E S + ++ L + + G + ++ EM +G+ PN ++ +
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 431 RKCLEKKNEI 440
L +N +
Sbjct: 389 INALCNENRL 398
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ + K E A L E R D T+N+L+ LC GK +A ++L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI-EPCILTHAAVIKSYFELGKYE 371
P YN LI CK + + A + + + P ++T+ ++I Y + GK
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + Y +N +++L + K G ML A++I +M+ G P+ F +
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ A+C + +A L+ ++ P YN ++ CK GK EA ++E +E
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + + ILI C G+ A K+ G P +T ++++ + G +
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLA 408
EA Y + +++ S+N + L K N LA
Sbjct: 505 EA--YHLNQIARKGQSNN-----VVPLETKTANATLA 534
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+NVL+ K G+ A + +M G PD+ T+ L+ C+ G+ ++ ++ E +
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P F Y+ILI+ LC + AR+ L ++ K I P + VI + + GK
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA+ V K+ +++L H KG M A I ++M+ G P+ + +
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 432 KCLEK 436
CL K
Sbjct: 495 SCLLK 499
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGF-DPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN L++ CK + +A + K++K PD+ TY ++S CK GK EA +L+ +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ P +N+L+ K G+ A + K+ G P ++T ++I Y +G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ ++ + + YS+L + +L A+++L ++ K + P ++N V
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+R +C G E+A L+ M G +PD+ TYN L+ CK+ + +A ++ + V+
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
P Y +IS CK G+ A LD + GI P +T ++ Y + G+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A E S + ++ L + + G + ++ EM +G+ PN ++ +
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 431 RKCLEKKNEI 440
L +N +
Sbjct: 389 INALCNENRL 398
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ + K E A L E R D T+N+L+ LC GK +A ++L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI-EPCILTHAAVIKSYFELGKYE 371
P YN LI CK + + A + + + P ++T+ ++I Y + GK
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + Y +N +++L + K G ML A++I +M+ G P+ F +
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ A+C + +A L+ ++ P YN ++ CK GK EA ++E +E
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + + ILI C G+ A K+ G P +T ++++ + G +
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLA 408
EA Y + +++ S+N + L K N LA
Sbjct: 505 EA--YHLNQIARKGQSNN-----VVPLETKTANATLA 534
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L++ + GD + A + K+M G PD+ TY++L+ LC NGK +A +V + ++
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K + Y +I +CK G+ D ++LKG++P ++T+ +I +
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
EA+ + + Y+ L HL+ G+ + +++ EM
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + I V+ +N ++ ++CK + A L
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVV--------IFNTIIDSLCKYRHVDDALNLF 208
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
KEM+ G P++ TY+ L+SCLC G++++A Q+L + + P +N LI K
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+F A K D + + I+P I T+ ++I + + ++A + SK + Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGL 420
+ L K + ++ EM +GL
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGL 356
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ L+ +C G + A L+ +M +P++ T+N L+ K GKF EA +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + K P F YN LI+ C H + D A++ + + K P + T+ +IK +
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + E+ E + + Y+ L G+ AQK+ +M+ G+ P+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 426 VFN 428
++
Sbjct: 397 TYS 399
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y V++ +CK+GD + A L+ +M+ + + D+ +N ++ LCK +A + + +E
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y+ LIS LC +G++ A + L + K I P ++T A+I ++ + GK+
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + K+S + Y+ L + A+++ M+ K P+ +N +
Sbjct: 273 EA-EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 431 RK--CLEKKNEIG 441
K C K+ E G
Sbjct: 332 IKGFCKSKRVEDG 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y ++++ LCK G DLA L+K+ IE ++ +I S + ++A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+K + YS L + G A ++L +M++K + PN FN +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ A+ K ++ L ++M+R G ++ TYN+L++C C+ + + A +L +
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ G P +T +I F K
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V + + Y ++ K+G++ LA +L +M ++ + +FN +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 11/214 (5%)
Query: 225 LIEMFTFTGSF--------DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMK 276
LI+ F G F D+++ I D + YN L+ C ++A + + M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPD---IFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
PD+ TYN L+ CK+ + + ++ + + Y LI L G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A+K ++ G+ P I+T++ ++ GK E+A E + Y+ +
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K G + + + KG+KPN +N +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 175/421 (41%), Gaps = 57/421 (13%)
Query: 67 FSSYPCSSFKGRPYAS-AKQVSEIVALIREGVND--LEFSLNRVNVSLSMALIVEIFHIL 123
+ S+ SS + + A+ A Q +E + I D +E LN +V LS ALI E+ L
Sbjct: 45 YGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKL 104
Query: 124 ASERVSALQFFHWLKGS----HPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRV 179
++ V AL F W + H + I ++ + ++++ +++
Sbjct: 105 SNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQ-----FKLIWSLVDDMKAKKL 159
Query: 180 HLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVE 239
L + F L+ +A V+ + E G +SS +++ + + + +
Sbjct: 160 -LSKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQ 217
Query: 240 YVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL 294
V K ++K + Y +L+ ++ + R + +EMK GF+PD+ Y ++++
Sbjct: 218 KVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Query: 295 CKNGKFAEACQVLETVE----------------------------------KDHGLPKEF 320
CK K+ EA + +E K G P E
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 321 -NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
YN L+ C + + A K +D++ LKG+ P T+ ++ + + +EA+E
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT 397
Query: 380 SASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
+ + + S+ Y ++ + K + +A KI EM KG+ P +F+ + L +N+
Sbjct: 398 MSCEPTVST---YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Query: 440 I 440
+
Sbjct: 455 L 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A C E A V EM+ G P+ TY++++ L + + EA +V +T+
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y I++ + C + D+A K D++ KG+ P + +++I + K +
Sbjct: 400 CE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 372 EAHEY 376
EA EY
Sbjct: 457 EACEY 461
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 187 GFLLVLNLDKAS-------TVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVE 239
GF + LD+A + +C ++ + G C++ I +E+F +V
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 240 YVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK 299
+ Y L+ + D + A + K+M G P++ TYN L+ LCKNGK
Sbjct: 434 NTV--------TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 300 FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
+A V E +++ P + YNI+I +CK G+ + ++LKG++P ++ +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 360 VIKSYFELGKYEEA 373
+I + G EEA
Sbjct: 546 MISGFCRKGLKEEA 559
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + I V+ Y+ ++ ++CK + A L
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVV--------IYSTVIDSLCKYRHEDDALNLF 283
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM+ G P++ TY+ L+SCLC ++++A ++L + + P +N LI K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K D++ + I+P I T++++I + + +EA SK + + Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ L K + ++ EM +GL N
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ L+ +C + A L+ +M +P++ T+N L+ K GK EA +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + + K P F Y+ LI+ C H + D A+ + + K P ++T+ +I +
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + +E E + + + Y+ L + + AQ + +M+ G+ PN
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 426 VFNKVRKCLEKKNEI 440
+N + L K ++
Sbjct: 472 TYNTLLDGLCKNGKL 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y ++++ LCK G DLA L+K+ IE ++ ++ VI S + ++A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+K + YS L + A ++L +M+++ + PN FN +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 435 EKKNEI 440
K+ ++
Sbjct: 341 VKEGKL 346
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
LV M + G P++ TY ++V+ LCK G A +L +E Y+ +I LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
K+ D A ++ KG+ P ++T++++I ++ +A + ++ +
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
++ L +K+G ++ A+K+ EM+ + + P+ ++ +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y V++ +CK+GD + A L+ +M+ + + ++ Y+ ++ LCK +A + +E
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y+ LIS LC + ++ A + L + + I P ++T A+I ++ + GK
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + K+S + YS L + A+ + M+ K PN +N +
Sbjct: 348 EA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 4/186 (2%)
Query: 247 RKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
RK+N +N L+ A K+G A L EM + DPD+ TY+ L++ C + + E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A + E + P YN LI+ CK + D + +++ +G+ +T+ +I
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+F+ + A S + + Y+ L K G + A + + ++P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 423 NFSVFN 428
+N
Sbjct: 504 TIYTYN 509
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +CK G E+A + + ++RS +P + TYN+++ +CK GK + + ++
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
P YN +IS C+ G + A K+ G P
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ A+ K ++ L ++M+R G ++ TYN+L++C C+ + + A +L +
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ G P +T +I F K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V + + Y ++ K+G++ LA +L +M ++ N +++ V
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+++ A+C+ G RA + ++M GF P++ + L+ LCK G +A ++LE + ++
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 314 HGLPKEFNYNILISLLCKHGQFDLA-RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P + + LI LCK G + A R FL + +P + T+ ++I Y + K
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 373 AHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A E + +Q N N Y+ L H K G+ A +++ M D+G PN +N
Sbjct: 377 A-EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 432 KCLEKKN 438
L KK+
Sbjct: 436 DSLCKKS 442
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 201 ECVRKIMDVLNEVGGLCQSS-GIRLLIEMFTFTGSFDIVEYVIGK-DRRKV----NHYNV 254
E V +MD+ N+ GL SS + ++E+ G + E V + R V + Y +
Sbjct: 165 EAVGMVMDMQNQ--GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
++ + G + A + M + GF PD T L+++ LC+NG A +
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P N+ LI LCK G A + L+++ G +P + TH A+I + G E+A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 375 EYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ +Y N Y+ + + K+ + A+ + M ++GL PN + + +
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +L++ CK+ D +A M ++GF+ DM N+L++ C+ K E+ ++ + V
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P + Y +IS CK G DLA K+ + G P T+ ++I + +
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + + LA + K+ + A IL E +DK L +V VR
Sbjct: 586 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKLWIR-TVRTLVR 643
Query: 432 K-CLEKK 437
K C EKK
Sbjct: 644 KLCSEKK 650
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
VN Y L+ CK G + RA L+ M GF P++ TYN + LCK + EA ++L
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
Y ILI CK + A F ++ G E + + +I ++
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K +E+ S + Y+ + + + K+G++ LA K + M G P+ +
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 429 KVRKCLEKKNEI 440
+ L KK+ +
Sbjct: 573 SLISGLCKKSMV 584
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 11/218 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ I+ EM E V + V + L+ +CK+G E+A L
Sbjct: 294 IDGLCKKGSIKQAFEMLE--------EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 273 KEMKRSG-FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLC 330
++ RS + P++ TY ++ CK K A ++L + K+ GL P Y LI+ C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA-EMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
K G F A + ++ + +G P I T+ A I S + + EA+E + + S +
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
Y++L K+ ++ A M G + + + N
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV-LET 309
++ L+ +CKKG ++A +++EM R+G+ P++ T+ L+ LCK G +A ++ L+
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
V D P Y +I CK + + A ++ +G+ P + T+ +I + + G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 370 YEEAHE 375
+ A+E
Sbjct: 409 FGRAYE 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ Y ++ CK+ RA L MK G P++ TY L++ CK G F A +++
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + +P + YN I LCK + A + L+K G+E +T+ +I+ +
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 369 KYEEAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+A + +K + ++ ++L ++ M ++++ ++ GL P +
Sbjct: 478 DINQALAFFC-RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 428 NKVRKCLEKKNEI 440
+ C K+ +I
Sbjct: 537 TSMISCYCKEGDI 549
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 290 LVSCLCKN----GKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI 345
++ C+ +N G+ EA ++ ++ P N ++ + + G + A D++
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 346 TLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNM 405
+++G+ P ++ ++ F GK +EA ++ G + NA +L+ T + G
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG-- 266
Query: 406 LLAQKILY--EMMDKGLKPNFSVFNKVRKCLEKKNEI 440
L+ + I Y +M+D G KPN F + L KK I
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ C A LV M +SG++P++ YN L+ LCKNG+ A ++L +E
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K YN L++ LC G++ A + L + + I P ++T A+I + + G +
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E +N Y+ + G + A+K M KG PN +N +
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +CK G+ A L+ EM++ G D+ TYN L++ LC +G++++A ++L +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + LI + K G D A++ ++ ++P +T+ ++I G+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+A + ASK + + Y N L++ + M+D+G+K
Sbjct: 299 DAKKTFDLMASKGCFPNVVTY-----------NTLISGFCKFRMVDEGMK 337
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 215 GLC----QSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGF 270
GLC S R+L +M + + D+V + L+ K+G+ + A
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTF------------TALIDVFVKQGNLDEAQE 267
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L KEM +S DP+ TYN +++ LC +G+ +A + + + P YN LIS C
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ 384
K D K +++ +G I T+ +I Y ++GK A + S++
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 87/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +L+ C+ A ++ +M + G++P + T+ L+ C + +A ++ +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P YN LI LCK+G+ ++A + L+++ KG+ ++T+ ++ G++
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + + ++ L + +K+GN+ AQ++ EM+ + PN +N +
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+ G A + M PD+ T+ +L+ LC NG+ A + +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ YNI+I LCK + + A + ++ ++G++P T+ +I + G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 372 EAHEYV 377
EA E +
Sbjct: 474 EADELI 479
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N ++ + Y++A +++ ++ G PD+ TYN L+ + G+ +A ++L+T+E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P +YN +I C+ G A + L ++T +GI PCI T+ + Y +G +
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 372 EAHEYV 377
E + +
Sbjct: 754 EIEDVI 759
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE------ 302
V YN L+ A+ +KGD+ ++ +MK GF P T+Y+L++ C K G +
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 303 ----------------------ACQVLETVE------KDHGL-PKEFNYNILISLLCKHG 333
C+ L E K HG P +N ++S+ ++
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYS 393
+D A L+ I G+ P ++T+ +++ Y G+ +A E + Q +Y+
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ ++G M A ++L EM ++G++P +N
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+ ++ A ++G A E+K G++P TYN L+ K G + EA VL+ +E+
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ YN L++ + G A ++ +T KG+ P +T+ VI +Y + GK +E
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A + + Y+ + +L KK K+L +M G PN + +N +
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK-FAEACQVL 307
V Y ++ A + G YE+A L + MK G P + TYN+++ K G+ + + VL
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 308 ETVEKDHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ + + GL EF + ++S + G A++F ++ G EP +T+ A+++ + +
Sbjct: 270 DEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G Y EA + + + Y+ L +++ G A ++ M KG+ PN
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 427 FNKV 430
+ V
Sbjct: 389 YTTV 392
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ K G Y A ++KEM+ + D TYN LV+ + G EA V+E +
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K +P Y +I K G+ D A K + G P T+ AV+ + +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
E + + S + A ++ + L KG ++ EM G +P+ FN +
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +++ C++G + A ++ EM G P + TYN VS G FAE V+E +
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
K+ P E + +++ C+ G++ A F+ KI K +PC
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFDPC 803
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ + KK ++ +MK +G P+ T+N +++ LC N + +
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREM 482
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K G P +N LIS + G A K ++T G C+ T+ A++ + G +
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+ SK + +YSL+ + K GN L ++I + + + P++
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 188 FLLVLNLDK-ASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFD-----IVEYV 241
F + N D +S++E +R+I+ + G + LI G D I +
Sbjct: 95 FKFLTNTDSYSSSLEDLRRILPQTD--AGYTRKHSYETLIARLCKLGRIDDALVLINDMA 152
Query: 242 IGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
IG+ ++ ++ + KK E A +V+ M+ D+T+YN ++ C +G A
Sbjct: 153 IGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVA 212
Query: 302 EACQVLETVEKDH-GL--PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
EA +VL +E++ G+ P Y+ L+ CK G+ + A L ++ +G+ THA
Sbjct: 213 EASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHA 272
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
VI E G Y + E+V+ A K N LA+ +K+ A+ +L EM +
Sbjct: 273 HVIGEMVESGYYALSVEFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVR 332
Query: 419 GLK 421
GL+
Sbjct: 333 GLR 335
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
NVL+ + CK G R F + ++ D TYN ++S LC++G EA Q L + K
Sbjct: 133 NVLIHSFCKVG---RLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
LP +YN LI CK G F A+ +D+I+ E ++TH ++ SY+ L EE
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIEE 245
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A+ +V S +S + K G +L +L EM + + PN + +
Sbjct: 246 AYRDMVMSGFDPDV---VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 433 CLEKKN 438
L K N
Sbjct: 303 SLFKAN 308
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +CK GD A F++ +M P++ TY+ +++ K G EA +L +E
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P F Y +I L K G+ ++A + ++ L G+E A++ +G+ +
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E V SK NY+ L + K G+ A EM ++G+ + +N +
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 432 KCLEKKNEIG 441
+ K ++G
Sbjct: 547 SGMLKFGKVG 556
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKE----------------------------MKRSGFDPD 283
YN L+ CK G++ RA LV E M SGFDPD
Sbjct: 199 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPD 258
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
+ T++ +++ LCK GK E +L +E+ P Y L+ L K + A
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 344 KITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKG 403
++ ++GI ++ + ++ F+ G EA + + Y+ L K G
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 404 NMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKK 437
++ A+ I+ +M++K + PN ++ + KK
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 94/247 (38%), Gaps = 70/247 (28%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL---- 307
+N++M + K+GD E L +MK G P + + N++V LC+NGK EA +L
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 308 ------------------------ETVEKDHGLPKEFN-------YNILISLLCKHGQF- 335
+ + K H + YN LI+ LCK G
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 336 -------DL-ARKFL-DKITLK-------------------------GIEPCILTHAAVI 361
D+ AR F+ D +T GI P + T+ +I
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+ + G +E +++ S+ + Y+ L + K GNM + I EM+ GL
Sbjct: 756 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Query: 422 PNFSVFN 428
P S +N
Sbjct: 816 PKTSTYN 822
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN ++R + G + + EMK G PD TYN L+S K G + +
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYC 807
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ D +PK YN+LIS G+ AR+ L ++ +G+ P T+ +I +L
Sbjct: 808 EMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLC 867
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY---EMMDKGLKPNFS 425
+ + V K Y + A LL + +KG + Q I + G+K +
Sbjct: 868 THPD-----VEWNKKAMYLAEAK-GLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAE 921
Query: 426 VFNKVRKCLEKKN 438
F +++C +KKN
Sbjct: 922 RF--LKECYKKKN 932
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VLM + K GD A K + P++ TY LV LCK G + A ++ +
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P Y+ +I+ K G + A L K+ + + P T+ VI F+ GK E
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATL-HLKK-GNMLLAQKILYEMMDKGL 420
A E + + NY L A + HLK+ G + + ++ +M+ KG+
Sbjct: 452 MAIE--LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ +C+ G + A + EM + G PD +YN L+ CK G F A +++ +
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
E N LL + + + + G +P ++T +++I + GK
Sbjct: 224 -------ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY-EMMDKGLKPNFSVFNKV 430
E + Y ++ Y+ L L K N+ LY +M+ +G+ + V+ +
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVD-SLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 431 RKCLEKKNEI 440
L K ++
Sbjct: 336 MDGLFKAGDL 345
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 197 ASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR-----KVNH 251
+S +E +R+++ ++ GG + + +LI G D VIG +
Sbjct: 87 SSYLEDLRRVLPQID--GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPST 144
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ ++ +K E A +V+ M+ D+T YN ++ C +G+ A +V+ +E
Sbjct: 145 YHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIE 204
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D P +Y+ L+ C+ G+ + A L ++ G+ THA VI E G Y
Sbjct: 205 EDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYA 264
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
E+V+ A K + ++ LA +K+ A ++ EM+ +GL+
Sbjct: 265 LGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 145/349 (41%), Gaps = 14/349 (4%)
Query: 84 KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPE 143
++V ++ L E + + SL + + + ERV AL+FF+W
Sbjct: 145 REVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERV-ALKFFYW-ADRQWR 202
Query: 144 LCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECV 203
DP + + +L R ++ AF ++V + +A +
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV-SYSRAGQLRDA 261
Query: 204 RKIMDVLNEVGG-----LCQSSGIRLLIEMFTFTGSFDIVE--YVIGKDRRKVNHYNVLM 256
K++ ++ G +C ++ I + + + +E V+G V YN ++
Sbjct: 262 LKVLTLMQRAGVEPNLLICNTT-IDVFVRANRLEKALRFLERMQVVGIVPNVVT-YNCMI 319
Query: 257 RAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL 316
R C E A L+++M G PD +Y ++ LCK + E +++ + K+HGL
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 317 -PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
P + YN LI +L KH D A FL KG L ++A++ + + G+ EA +
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 376 YVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ SK + Y+ + + G + A+K+L M G KPN
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C+ G A ++ + + P+ TY++++ L + GK +EAC V+ +
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P N+L+ LC+ G+ ARKF+++ KG ++ VI + + + +
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A + ++ Y+ L KKG + A +++ +M+ KG+ P + V
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTV 670
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGF-DPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y+ ++ A+CK+G A L+ EM G PD+ TY +V+ C+ G+ +A ++L+ +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
P +Y L++ +C+ G+ AR+ ++ P +T++ ++ GK
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + V K + +LL + G A+K + E ++KG N F V
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEM-KRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
KV++Y + M +CK+ L+K+M K G PD TYN L+ L K+ EA
Sbjct: 347 KVSYYTI-MGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG-IEPCILTHAAVIKSYF 365
L+ ++ + Y+ ++ LCK G+ A+ ++++ KG P ++T+ AV+ +
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
LG+ ++A + + + + +Y+ L + G L A++++ + PN
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525
Query: 426 VFNKVRKCLEKKNEI 440
++ + L ++ ++
Sbjct: 526 TYSVIMHGLRREGKL 540
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 70/258 (27%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE--- 308
Y+V+M + ++G A +V+EM GF P NLL+ LC++G+ EA + +E
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 309 ------------TV--------EKDHGL------------PKEFNYNILISLLCKHGQFD 336
TV E D L F Y L+ L K G+
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE------------------------- 371
A + + K+ KGI+P +T+ VI Y ++GK +
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEK 706
Query: 372 -------EAHEYVVGSASKQSYSSNAN--YSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
E + ++G + + S+A Y+L+ +LKKG L A K+ M ++ L P
Sbjct: 707 LCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEG-YLKKGVPLSAYKVACRMFNRNLIP 765
Query: 423 NFSVFNKVRKCLEKKNEI 440
+ + K+ K L K ++
Sbjct: 766 DVKMCEKLSKRLVLKGKV 783
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
MKR G ++ ++ + G+ +A +VL +++ P N I + + +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
+ A +FL+++ + GI P ++T+ +I+ Y +L + EEA E + SK +Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 395 LATLHLKKGNMLLAQKILYEMM-DKGLKPNFSVFNKVRKCLEKKN 438
+ K+ ++ + ++ +M + GL P+ +N + L K +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ C E A L ++ GF P++ TY L+ CLCKN A ++ +
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN L++ LC+ G++ A L + + IEP ++T A+I ++ ++GK
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA E Y Y L G + A+++ Y M G PN ++ +
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 432 K--CLEKKNEIG 441
C K+ E G
Sbjct: 336 HGFCKSKRVEDG 347
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 216 LCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM 275
LC++ + +E+F G+ R V YN L+ +C+ G + A +L+++M
Sbjct: 198 LCKNRHLNHAVELFNQMGT--------NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 276 KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
+ +P++ T+ L+ K GK EA ++ + + P F Y LI+ LC +G
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
D AR+ + G P + + +I + + + E+ + + K ++ Y++L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ G +AQ++ +M + P+ +N
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+R +CK A L +M +G P++ TYN LV+ LC+ G++ +A +L +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + LI K G+ A++ + + + P + T+ ++I G +
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA + Y + Y+ L K + KI YEM KG+ N
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ CK E + EM + G + TY +L+ C G+ A +V +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN+L+ LC +G+ + A + + + ++ I+T+ +I+ +LGK E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+A + SK + Y+ + + ++G + A + +M + G PN SV+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 196 KASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGK--DRR---KVN 250
K+ VE KI +++ G + + +LI+ + G D+ + V + RR +
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YNVL+ +C G E+A + + M++ D ++ TY +++ +CK GK +A + ++
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
P Y +IS C+ G A K+ G P
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 78/179 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C G + A + M+R+G P+ Y L+ CK+ + + ++ +
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + Y +LI C G+ D+A++ ++++ + P I T+ ++ GK E
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A ++ + Y+++ K G + A + + KG+KPN + +
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ + K Y+ L ++M+ G P + T N+++ C+C + + A L + K
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P + L++ C + + A D+I G +P ++T+ +I+ + A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN------ 428
E + S + Y+ L T + G A +L +MM + ++PN F
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 429 -KVRKCLEKK 437
KV K +E K
Sbjct: 269 VKVGKLMEAK 278
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +M A+ K G ++ A + ++ K G + TT+ +LV LCK G+ E ++L+ +
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P F Y +I L G D + + D++ I+P ++ + ++ + G+ E
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+E + KQ Y +L + G + A + +++D G + ++N V
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVI 410
Query: 432 KCLEKKNEI 440
K L N++
Sbjct: 411 KGLCSVNQV 419
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 234 SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+ D+ + K V+ YN+LM A+ K GD +++ L EM++ GF+PD ++Y++ + C
Sbjct: 492 ALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICC 551
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
+ G AC E + + +P Y L LC+ G+ D
Sbjct: 552 FVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEID 594
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 11/190 (5%)
Query: 188 FLLVLNLDKASTVECVRKIMDVLNEVGGLCQSS--GIRLLIEMFTFTGSFDIVEYVIGKD 245
+LV L KA +E + +I+ + E LC+ +I+ G+ D V +
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRE--NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 246 RRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF 300
RR V Y L+ +CK G ER L EMK D Y +L+ +GK
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 384
Query: 301 AEACQVLETVEKDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAA 359
AC + E + D G + YN +I LC Q D A K + +EP T +
Sbjct: 385 RSACNLWEDL-VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSP 443
Query: 360 VIKSYFELGK 369
++ +Y + +
Sbjct: 444 IMVAYVVMNR 453
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ + G +R L EM R GF PD TYN+L+ L K K A L ++
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMK 316
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +Y LI L + G + + FLD++ G P ++ + +I Y G+ +
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E K + Y+ + G A +L EM +G PNF V++ +
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 432 KCLEKKNEI 440
L K ++
Sbjct: 437 SYLRKAGKL 445
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ ++ Y+ ++ K+M GF PD+ TYN+L+ + GK ++ + +
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D P + YNIL+ +L K + A L+ + GI+P +L + +I G E
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
++ Y+++ T ++ G + A+++ EM KG PN +N +
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 432 KCL 434
+ L
Sbjct: 402 RGL 404
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V HY L+ + + G+ E + + EM ++G PD+ Y ++++ +G+ +A ++
Sbjct: 324 VLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFR 383
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ LP F YN +I LC G+F A L ++ +G P + ++ ++ + G
Sbjct: 384 EMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Query: 369 KYEEAHEYVVGSASKQSY 386
K EA + + K Y
Sbjct: 444 KLSEARKVIREMVKKGHY 461
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R VN Y++LM+ + G+Y+ LV EM + GF T+NLL+ C C A+
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI-CSCGEAGLAKQAV 204
Query: 306 VLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
V K P + +YN +++ L Q+ L ++ G P +LT+ ++ +
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH-LKKGNMLLAQ-KILYEMMDKGLKP 422
+ LGK + + + ++ +S ++ Y+ LH L KGN LA L M + G+ P
Sbjct: 265 YRLGKMDR-FDRLFDEMARDGFSPDS-YTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 423 N 423
+
Sbjct: 323 S 323
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNVL+ A K GD E+A L+ EM+ G PD+ TYN L+S CK EA V + +E
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 312 KD-------------HGLPKE---------------------FNYNILISLLCKHGQFDL 337
+ HG +E Y LI C+ D
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
A + + + +G P ++T+ ++++ E G+ EA+ + + K+ N + L
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 398 LHLKKGNMLLAQKILYEMMDKGLK 421
+ K +M+ A K+ +M++ GLK
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLK 409
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 244 KDRRKVNH--YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
KD NH Y L+ C+ D + A L + M+ GF P + TYN ++ LC++G+
Sbjct: 300 KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
EA ++L + P N LI+ CK A K K+ G++ + ++ A+I
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+ ++ + E A E + K A YS L + K+L E +GL
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 422 PNFSVF 427
+ +++
Sbjct: 480 ADVALY 485
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
VL+ ++ K+ + + K+M + G ++ YN+LV K+G +A ++L +E+
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P F YN LIS+ CK A D++ G+ P I+T+ + I + G+ E
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A + +++ Y+ L + + ++ A ++ M +G P +N + +
Sbjct: 292 ATR-LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 433 CL 434
L
Sbjct: 351 KL 352
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN ++R C+ + E+A L EMK SG + T+ +L+ CK GK EA L+
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 309 TVEKDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ K GL + Y LI C G+ D + D++ +G PC +T+ +I+ + +L
Sbjct: 237 EM-KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
G+ +EA E + + Y+ L G A ++L M++K +PN +
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 428 N 428
N
Sbjct: 356 N 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 88/179 (49%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V ++N+L++ +C+ + +A L++EM+R+ PD+ +YN ++ C+ + +A ++
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ + ILI CK G+ D A FL ++ G+E ++ + ++I+ + + G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + + Y+ L K G + A +I M+++G++PN +
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+R C G+ +R L E+ G P TYN L+ CK G+ EA ++ E +
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + Y LI LC G+ A + L+ + K EP +T+ +I + G
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG--LKPNFSVFNK 429
+A E V +++ N Y++L KG++ A K+LY M+ P+ +N
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 430 VRKCLEKKNEI 440
+ L K+N +
Sbjct: 430 LIHGLCKENRL 440
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 215 GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKE 274
GLC+ + + ++++ +VE + DR N +L+ + K GD +A L K+
Sbjct: 433 GLCKENRLHQALDIYDL-----LVEKLGAGDRVTTN---ILLNSTLKAGDVNKAMELWKQ 484
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
+ S + TY ++ CK G A +L + P F+YN L+S LCK G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
D A + +++ P +++ +I + G + A +VG + YS
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
L LK G + A +M+D G +P+ + + V K
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDR-----RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
+I+ F TG ++ + ++ K R V YN L+ ++CK+G ++A L +EM+R
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
PD+ ++N+++ K G A +L + + P F Y+ LI+ K G D A
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ-SYSSNANYSLLATL 398
F DK+ G EP +V+K G+ ++ E V K +++ +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 399 HLKKGNMLLAQKILYEMMDK 418
NM LA+++L DK
Sbjct: 680 CNSSANMDLAKRLLRVTDDK 699
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 234 SFDIVEYVIGKDRRKVN-HYNVLMRAVCKKGDYERAGFLVKEM-KRSGF-DPDMTTYNLL 290
+ +IVE + + R N YN+L+ +C KGD + A L+ M K S + DPD+ +YN L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 291 VSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNIL------------------------- 325
+ LCK + +A + + + + G NIL
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 326 ----------ISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
I CK G ++A+ L K+ + ++P + + ++ S + G ++A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 376 YVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
++ +++++ LK G++ A+ +L M GL P+ ++K+
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 5/244 (2%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDR--- 246
L+ L K+ + V +I+ ++ C+ S LI+ + GS D V K
Sbjct: 87 LIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFD 146
Query: 247 --RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEAC 304
R + N L+ + G+ E+A K P+ ++N+L+ + AC
Sbjct: 147 CVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAAC 206
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
+V + + + P YN LI LC++ A+ L+ + K I P +T ++K
Sbjct: 207 KVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGL 266
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
G+Y EA + + + NY +L + K+G + A+ +L EM + +KP+
Sbjct: 267 CCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDV 326
Query: 425 SVFN 428
++N
Sbjct: 327 VIYN 330
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +LM+ +C KG+Y A L+ +M+ G P + Y +L+S L K G+ EA +L ++
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P YNIL++ LC + A + L ++ +KG +P T+ +I + + ++
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
+ + + + A + + +K GN+ A +L M K L
Sbjct: 379 SGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+Y +LM + K+G + A L+ EMK+ PD+ YN+LV+ LC + EA +VL +
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ P Y ++I C+ FD L+ + P T ++ + G
Sbjct: 353 QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
Query: 371 EEAHEYVVGSASKQ--SYSSNANYSLLATLHLKKGNM 405
+ A +V+ K+ S+ S A +LL+ L +K G +
Sbjct: 413 DHAC-FVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +C+ D +A L+++M + P+ T+ LL+ LC G++ EA +++ +E
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P NY IL+S L K G+ D A+ L ++ + I+P ++ + ++ +
Sbjct: 284 YRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 372 EAHEYVVGSASKQSYSSNANYSLL 395
EA+ + K + A Y ++
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMM 367
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ A+ K + A ++M+ G PD TYN+L+ +CK G EA ++++ +E
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P F Y ILI G+ D A K L+ + ++ + P T + F
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQ--KILYEMMDKGLKPNFSVFNK 429
+A E +VG K S Y A L+ N + + + L ++ ++G P+ S FN
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYD--AVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360
Query: 430 VRKCLEKKNEI 440
CL K +++
Sbjct: 361 AMSCLLKGHDL 371
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+R+ C GD +R+ L +MK +G PD+ YN + CK K +A ++L+T+
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
+ P F Y+ LI L + G+ AR+ I G P
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+++++ +C+ + + A KEM G +P+ TYN+L+ C G + ++ ++
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P + YN I CK + A + L + G++P T++ +IK+ E G+
Sbjct: 558 ENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRES 617
Query: 372 EAHE 375
EA E
Sbjct: 618 EARE 621
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 35/210 (16%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYN-------------------- 288
V YN ++ +CK E A + EM+ G P++ T+N
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 289 ---------------LLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHG 333
L+++CLC+ + +A + + + P E YNILI C G
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG 544
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYS 393
D + K K+ G+ P + + A I+S+ ++ K ++A E + N YS
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
L + G A+++ + G P+
Sbjct: 605 TLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ ++ + + G ++++ G+ PD +T+N +SCL K E C++ +
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGF- 381
Query: 312 KDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
G+ FN Y +L+ L +F ++L ++ + G+ + ++ AVI + +
Sbjct: 382 VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRI 441
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
E A ++ + + ++ + + +G++ +L +++ G KP+ F+ +
Sbjct: 442 ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 431 RKCLEKKNEI 440
CL + EI
Sbjct: 502 INCLCRAKEI 511
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
N Y VL++A+ + +K+M G + +YN ++ CLCK + A L T
Sbjct: 391 NGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFL-T 449
Query: 310 VEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+D G+ P +N +S G L+K+ + G +P ++T + +I
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ ++A + + Y++L G+ + K+ +M + GL P+ +N
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N M + K D + G P Y +LV L +F+E + L+ +
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D L ++YN +I LCK + + A FL ++ +GI P ++T + Y G +
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN-KV 430
+ H + +SL+ + + A EM++ G++PN +N +
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 431 RKC 433
R C
Sbjct: 538 RSC 540
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YN L+ + G + + ++ +M R G PD+ T++ L+ K G+ EA +
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ + P YN LI+ LC HG D A+K L+ + KG P +T+ +I Y
Sbjct: 276 QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + ++ + + + Y+ L + + G A+K+L M+ G+ P+
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 426 VFNKVRKCLEKKNEIG 441
FN + L +IG
Sbjct: 396 TFNILLDGLCDHGKIG 411
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L + C+ G + A ++ M G PDM T+N+L+ LC +GK +A LE ++
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K + YNI+I LCK + + A + LKG+ P ++T+ ++ +
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481
Query: 372 EAHE 375
EAHE
Sbjct: 482 EAHE 485
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ C+ A + +M + GF+P + T+ LV+ C +F EA +++ +
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN +I LC+ GQ + A L + GI P ++T+ ++I F G +
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ ++ + S + +S L ++ K+G +L A+K EM+ + + PN +N +
Sbjct: 237 VSAR-ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 81/189 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
++ L+ A+ K YE L + ++ G D+ ++ L+ C C+ + + A L +
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + L++ C +F A +D+I G EP ++ + +I S E G+
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + Y+ L T G ++ +IL +MM G+ P+ F+ +
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 432 KCLEKKNEI 440
K+ ++
Sbjct: 262 DVYGKEGQL 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 246 RRKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
+R VN YN L+ +C G + A ++ + GF P+ TYN L++ CK +
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
+ ++L + +D F YN L C+ G+F A K L ++ G+ P + T ++
Sbjct: 342 DGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Query: 362 KSYFELGKYEEA 373
+ GK +A
Sbjct: 402 DGLCDHGKIGKA 413
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+LM+A C D A L +M PD+ +Y +L+ C+ G+ A ++L+ +
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P +Y L++ LC+ Q A K L ++ LKG P ++ + +I + +
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A + + S ++ +Y L +G +K L EM+ KG P+FSV N
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 369
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ ++C+K A L+ MK G +PD+ YN ++ C+ + +A +VL+ +
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +Y LI LC G FD +K+L+++ KG P ++K + GK E
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 382
Query: 372 EAHEYV 377
EA + V
Sbjct: 383 EACDVV 388
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 205 KIMDVLNEVGGLCQSSGIRLLIEMFTF---------------TGSFDIVEYVIGKDRRKV 249
+ +++++V +SSG L E+FT+ + + ++E+ + +
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
N +L V +G ++A L K + G P+ +YNLL+ C N + A Q+
Sbjct: 158 NR--ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ + +P +Y ILI C+ GQ + A + LD + KG P L++ ++ S +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA++ + K +Y+ + ++ + A+K+L +M+ G PN
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ +C +G ++ ++EM GF P + N LV C GK EAC V+E V
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 392
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
K+ + ++I L+C + + + FL+
Sbjct: 393 KNGETLHSDTWEMVIPLICNEDESEKIKLFLE 424
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ I+ + + S +V + YN L+ A ++G+ + A LV
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTV--------TYNTLINAFLRRGEIKEARKLV 552
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM G D TYN L+ LC+ G+ +A + E + +D P + NILI+ LC+
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G + A +F ++ L+G P I+T ++I G+ E+ ++ +
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ L + K G + A +L E ++ G PN ++
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ K+G A ++ +M+ G P++ +Y +LV CK GK EA VL +
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P +N LIS CK + A + ++ KG +P + T ++I E+ + +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + S+ ++ Y+ L L++G + A+K++ EM+ +G + +N +
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 432 KCLEKKNEI 440
K L + E+
Sbjct: 572 KGLCRAGEV 580
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +L+ CK G + A ++ EM G P+ +N L+S CK + EA ++
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + P + +N LIS LC+ + A L + +G+ +T+ +I ++ G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ +EA + V + S Y+ L + G + A+ + +M+ G P+
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM +CK G + A L + + P++ +N L+ +G+ +A VL +
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+G+ P YN LI K G LA + L + KG +P + ++ ++ + +LGK
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+EA+ + ++ + ++ L + K+ + A +I EM KG KP+ FN +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 431 RKCLEKKNEI 440
L + +EI
Sbjct: 501 ISGLCEVDEI 510
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V +N L+ +C+ + + A +L+++M G + TYN L++ + G+ EA +++
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ E YN LI LC+ G+ D AR +K+ G P ++ +I G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EEA E+ + S ++ L + G + + ++ +G+ P+ FN
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 429 KVRKCLEK 436
+ L K
Sbjct: 674 TLMSWLCK 681
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ ++ K A L++EM G PD T+N ++ LCK + EA +++ +
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P + Y L++ LCK G+ D A+ +I +P I+ +I + G+ +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLD 370
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A + + + Y+ L + K+G + LA ++L++M +KG KPN
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+L+ +C+ G E A KEM G PD+ T+N L++ LC+ G+ + + ++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
+ P +N L+S LCK G A LD+ G P T + +++S
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+S + +E E V+ + +N L+ +C+ G E +
Sbjct: 606 INGLCRSGMVEEAVEFQK--------EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
++++ G PD T+N L+S LCK G +AC +L+ +D +P ++IL+ +
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Query: 333 GQFDLAR 339
D R
Sbjct: 718 ETLDRRR 724
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V + +L+ A+CK G++ A + M+ G P++ TYN L+ L + + +A ++
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+E P + Y + I K G A + +K+ KGI P I+ A + S + G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ EA + G + Y+++ + K G + A K+L EMM+ G +P+ V N
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 429 KVRKCLEKKNEI 440
+ L K + +
Sbjct: 543 SLINTLYKADRV 554
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 274 EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHG 333
EM++ G PD+ T+ +LV LCK G F EA L+ + LP YN LI L +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASK----QSYSSN 389
+ D A + + G++P T+ I Y + G A E +K + N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 390 ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
A+ LA K G A++I Y + D GL P+ +N + KC K EI
Sbjct: 473 ASLYSLA----KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N + ++ K G A + +K G PD TYN+++ C K G+ EA ++L + +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ P N LI+ L K + D A K ++ ++P ++T+ ++ + GK +E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A E G K + ++ L K + LA K+L++MMD G P+ +N +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 433 CLEKKNEI 440
L K ++
Sbjct: 652 GLVKNGQV 659
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R + Y+VL+ +C G + KE+K SG +PD+ YNL+++ L K+ + EA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 306 VLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
+ ++ G+ P + YN LI L G + A K ++I G+EP + T A+I+ Y
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 365 FELGKYEEAH 374
GK E A+
Sbjct: 1078 SLSGKPEHAY 1087
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y V + K GD A ++MK G P++ N + L K G+ EA Q+ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL- 494
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
KD GL P YN+++ K G+ D A K L ++ G EP ++ ++I + ++ +
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+EA + + + + Y+ L K G + A ++ M+ KG PN FN +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 431 RKCLEKKNEI 440
CL K +E+
Sbjct: 615 FDCLCKNDEV 624
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R + Y+ LM + K+ D + L+KEM+ G P++ T+ + + L + GK EA +
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+L+ ++ + P Y +LI LC + D A++ +K+ +P +T+ ++ +
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + ++ +++L K GN A L M D+G+ PN
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 426 VFNKV 430
+N +
Sbjct: 400 TYNTL 404
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y VL+ A+C + A + ++MK PD TY L+ N Q
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+EKD +P + IL+ LCK G F A LD + +GI P + T+ +I +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ ++A E S + Y + + K G+ + A + +M KG+ PN N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ K G+ + A L K M + G PD+ TY++LV CLC G+ E + ++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI-TLKGIEPCILTHAAVIKSYFELGKY 370
+ P YN++I+ L K + + A +++ T +GI P + T+ ++I + G
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 371 EEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
EEA + + + N ++ L + G A + M+ G PN + +
Sbjct: 1049 EEAGK-IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 430 V 430
+
Sbjct: 1108 L 1108
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 220 SGIRLLIEMFTFTGSFDIVEYVIGKD---RRKVNHYNVLMRAVCKKGDYERAGFLVKEMK 276
SG R L E FT KD + K+ YN+L+ + + E A + ++K
Sbjct: 766 SGARTLFEKFT-------------KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
+G PD+ TYN L+ K+GK E ++ + + +NI+IS L K G D
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 337 LARK-FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
A + D ++ + P T+ +I + G+ EA + G + A Y++L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
K G A + M+ +G++P+ ++ + CL
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 193 NLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFD-----IVEYVIGKDRR 247
+L KA ++I L ++G + S ++++ ++ G D + E +
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V N L+ + K + A + MK P + TYN L++ L KNGK EA ++
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
E + + P +N L LCK+ + LA K L K+ G P + T+ +I +
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 368 GKYEEA 373
G+ +EA
Sbjct: 657 GQVKEA 662
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ + K G A L + M G P+ YN+L++ K G+ AC + + +
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ P Y++L+ LC G+ D + ++ G+ P ++ + +I + + E
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLK---KGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA V+ + K S + +L L G + A KI E+ GL+PN FN
Sbjct: 1014 EA--LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 429 KV 430
+
Sbjct: 1072 AL 1073
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN L+ + K G + A L + M + G P+ T+N L CLCKN + A ++L
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ +P F YN +I L K+GQ A F ++ K + P +T ++ +
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAS 691
Query: 369 KYEEAHEYVV 378
E+A++ +
Sbjct: 692 LIEDAYKIIT 701
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
++ YN+L+ A+CK G + A L K +K S P++ TYN+L++ LCK+ + ++
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMR 212
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++K P Y ++ + K + + + K+ +G + AV+ + + G
Sbjct: 213 ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Query: 369 KYEEA----HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ EEA HE V Q S Y+ L L+ K GN+ +L E+ KGLKP+
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVS---YNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL- 307
V YN L+ K R L EM SG PDM +YN L+SC K G+ EA ++L
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH 142
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
E + +P YNIL+ LCK G D A + + + ++P ++T+ +I +
Sbjct: 143 EDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCK- 200
Query: 368 GKYEEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKG 419
+ + ++++ K Y+ NA Y+ + ++ K + ++ +M +G
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 215 GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKE 274
LC+S IE+F +++ + + ++ YN+L+ +CK ++++E
Sbjct: 163 ALCKSGHTDNAIELF---------KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 275 MKRSGFDPDMTTYNLL-----------------------------------VSCLCKNGK 299
+K+SG+ P+ TY + VS L K G+
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 300 FAEACQVLETVEKDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
EA + + + + ++ +YN L++L K G D L++I +KG++P TH
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 359 AVIKSYFELGKY--EEAHEYVVGSASKQ 384
++ +G E H +G Q
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQ 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N+ + ++CK + ERA L+ + R G PD+ TYN L+ + EA V + +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P YN LIS K+ + + D++ G+ P + ++ ++ YF+LG++ E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 373 A 373
A
Sbjct: 137 A 137
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ + + A + + M+ +G +PD+TTYN L+S KN Q+ + +
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFL-DKITLKGIEPCILTHAAVIKSYFELGKY 370
P ++YN L+S K G+ A K L + I L G+ P I T+ ++ + + G
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 371 EEAHE 375
+ A E
Sbjct: 171 DNAIE 175
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGF-DPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
++ A+ K G E A + E+ RSG D+ +YN L++ K+G +LE +E
Sbjct: 263 AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEM 322
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P ++ + I+++ L G A K L I G++P ++T +I + G +
Sbjct: 323 KGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDR 382
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
A + ++ Y+ + K G ++ A K+L +KG+K
Sbjct: 383 AMRLFASMEVRDEFT----YTSVVHNLCKDGRLVCASKLLLSCYNKGMK 427
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N ++ A + G+ ++A + ++MK SG P +T+N L+ K GK E+ ++L+ +
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+D L P + NIL+ C + + A + K+ G++P ++T + K+Y +G
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 371 EEAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
A + ++ N + + ++G M A + Y M + G+ PN VFN
Sbjct: 512 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 430 VRK 432
+ K
Sbjct: 572 LIK 574
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
LM + ++G + A + + G P + TY LV+ L + F ++ VEK+
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P +N +I+ + G D A K +K+ G +P T +IK Y ++GK EE+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 375 EYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKC 433
+ + N ++L + + A I+Y+M G+KP+ FN + K
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
++ LM A GD +R + +M G DPD+ +++L + G+ +A Q+L +
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI-TLKGIEPCILTHAAVIKSYFELGKY 370
K P Y +IS C G+ A + K+ + G+ P + T+ +I + E +
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLA 396
+A E + K + L+A
Sbjct: 724 WKAEELLKDMEGKNVVPTRKTMQLIA 749
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 159/421 (37%), Gaps = 55/421 (13%)
Query: 63 TRRYFSSY-PCSSFKGRPYASA--KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEI 119
T R+F+S P S P ++ +V ++R ++ E SLN + + ++ + +
Sbjct: 25 TIRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHP-ERSLNSLRLPVTSEFVFRV 83
Query: 120 FHILASERVSALQFFHWLKGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRV 179
+ +L+FF+W + S+P YE+M IL + +
Sbjct: 84 LRATSRSSNDSLRFFNWAR-SNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSL 142
Query: 180 HLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQ------SSGIRLLIEMFTFTG 233
+ F++ + V V +G CQ +S + L ++ F G
Sbjct: 143 DISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLG--CQQTVDVYNSLLHALCDVKMFHG 200
Query: 234 SFDIVEYVIGK----DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNL 289
++ ++ +I K D+R Y +L+ C G + A + EM R GF+P +L
Sbjct: 201 AYALIRRMIRKGLKPDKRT---YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ--------------- 334
L+ L G A +++ + K +P +NILI + K G+
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG 317
Query: 335 --------------------FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
D A + L+ G +P +A +IK G +++A
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAF 377
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ K + Y++L T+ + G + A L EM + GL P F+ V L
Sbjct: 378 SFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL 437
Query: 435 E 435
+
Sbjct: 438 K 438
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y L +++ YE ++K+MK D T ++ KNG +A ++ V
Sbjct: 113 EYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGV 172
Query: 311 EKDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K G + + YN L+ LC F A + ++ KG++P T+A ++ + GK
Sbjct: 173 PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK 232
Query: 370 YEEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+EA E+ + S++ ++ A LL L G + A++++ +M G P+ FN
Sbjct: 233 MKEAQEF-LDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFN 291
Query: 429 KVRKCLEKKNEI 440
+ + + K E+
Sbjct: 292 ILIEAISKSGEV 303
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V + L+ CK GD E A L KEM+R ++ TY L+ CK G+ A ++
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ +D P Y +I + G D A KFL K+ +G+ I + +I G
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K +EA E V ++ + + K G M A + ++++++G +P+ +
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 429 KVRKCLEKKNEI 440
+ + K ++
Sbjct: 378 TMIDGIAKNGQL 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH--YNVLMRAVCKKGDYERAGF 270
+ G C+ ++ EM++ +VE DR + N Y ++ ++GD + A
Sbjct: 240 IDGFCKKGEMQRAEEMYS-----RMVE-----DRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
+ +M G D+T Y +++S LC NGK EA +++E +EK +P + +++
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
K G+ A K+ +G EP ++ + +I + G+ EA Y +++
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-----IEKANDV 404
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
Y++L K+G+ + +++ ++ + GL P+
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 37/218 (16%)
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
+ +N ++ VCK G + A +V M R G +PD+ +YN L+ C+NG A VLE+
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 310 VEKDHGL-------------------------------------PKEFNYNILISLLCKH 332
+ HG P Y+ I CK
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ LA K + + P ++T +I Y + G E A + + Y
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ L KKG M A+++ M++ ++PN V+ +
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC + ++ E+ D+V ++ + +M A K G + A +
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMV--------IFTTMMNAYFKSGRMKAAVNMY 361
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
++ GF+PD+ + ++ + KNG+ EA V +EK + Y +LI LCK
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEK----ANDVMYTVLIDALCKE 416
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G F + KI+ G+ P + + I + G +A + + Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEIG 441
+ L KG M+ A+++ EM++ G+ P+ +VF+ + + EK+ +
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 220 SGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
S +++L E+F + G ++ V Y+ + CK G+ + A MKR
Sbjct: 140 SKMKMLDEVFVYMG------VMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
P++ T+ L+ CK G A + + + + Y LI CK G+ A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLH 399
+ ++ +EP L + +I +F+ G + A +++ ++ Y ++ +
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 400 LKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
G + A +I+ +M L P+ +F +
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VL+ A+CK+GD+ L ++ +G PD Y ++ LCK G +A ++ +
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ L Y LI L G AR+ D++ GI P
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP------------------- 506
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A + LL + K+GNM A +L +M +GL S + +
Sbjct: 507 ----------------DSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADCSK 550
Query: 432 KCLEKKN 438
+C + N
Sbjct: 551 QCGNEVN 557
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A+CK G RA L+ EMK +P+ T+N+L+S C K ++ +LE
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P ++ +LC G+ A + L+++ KG + ++ ++K Y LGK
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + + K + Y+LL + G + A +M ++ NF+ FN +
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 432 KCL 434
+ L
Sbjct: 396 RGL 398
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +LM+ + L++ MK SG P+ YN L+ LCKNGK A ++
Sbjct: 182 VYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMS 241
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P + +NILIS C + + L+K G P ++T V++ G
Sbjct: 242 EMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ EA E + SK + L + G M +AQ+ EM KG PN +N
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +++R CK+ E A +M SG PD Y L++ K ++L+
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P YN LI L+ + A + +K+ IEP I T ++KSYF
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
YE K + +Y++L + +G A + L EM+DKG+K +N
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 429 K 429
K
Sbjct: 548 K 548
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 138/369 (37%), Gaps = 43/369 (11%)
Query: 84 KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPE 143
K + E+ AL R ++E L+ + + LS LIVE+ R A +FF W
Sbjct: 136 KVIDELFALDR----NMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCW-AAERQG 190
Query: 144 LCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECV 203
D + +E MV +L E + G L T+E
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK---------GLL---------TMETF 232
Query: 204 RKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIG------------------KD 245
M ++ GI L++ + F + + ++ K+
Sbjct: 233 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 292
Query: 246 RRKVN--HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
R N Y VL+ C+ + A + +M G PD+ +N+++ L ++ K ++A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
++ ++ P +Y I+I CK + A ++ D + G++P + +I
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ K + +E + K Y+ L L + A +I +M+ ++P+
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 424 FSVFNKVRK 432
FN + K
Sbjct: 473 IHTFNMIMK 481
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 25/266 (9%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
+V NL +A + K++D + G CQ + + S+ Y+ +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDG--CQPN----TVTYNRLIHSYGRANYL----NEAM 419
Query: 250 NHYNVLMRAVCKKGD---------YERAGFL------VKEMKRSGFDPDMTTYNLLVSCL 294
N +N + A CK + +AGFL + M+ G PD TY+++++CL
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
K G A ++ + P YNI++ L K + A K + G EP
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+T++ V++ G EEA K Y LL L K GN+ A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 415 MMDKGLKPNFSVFNKVRKCLEKKNEI 440
M+ GL+PN N + + N+I
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 67/124 (54%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN++M K +Y+ A L ++M+ +GF+PD TY++++ L G EA V ++
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + +P E Y +L+ L K G + A ++ + G+ P + T +++ ++ + K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 372 EAHE 375
EA+E
Sbjct: 627 EAYE 630
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 264 DYERA-GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNY 322
DY A GF ++ GF D TY +V L + +F ++L+ + +D P Y
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 323 NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVV 378
N LI + + A +++ G +P +T+ +I + + G + A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 379 GSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
G S +++ YS++ K G++ A K+ EM+D+G PN +N
Sbjct: 463 GGLSPDTFT----YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 25/266 (9%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
+V NL +A + K++D + G CQ + + S+ Y+ +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDG--CQPN----TVTYNRLIHSYGRANYL----NEAM 419
Query: 250 NHYNVLMRAVCKKGD---------YERAGFL------VKEMKRSGFDPDMTTYNLLVSCL 294
N +N + A CK + +AGFL + M+ G PD TY+++++CL
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
K G A ++ + P YNI++ L K + A K + G EP
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+T++ V++ G EEA K Y LL L K GN+ A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 415 MMDKGLKPNFSVFNKVRKCLEKKNEI 440
M+ GL+PN N + + N+I
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 67/124 (54%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN++M K +Y+ A L ++M+ +GF+PD TY++++ L G EA V ++
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + +P E Y +L+ L K G + A ++ + G+ P + T +++ ++ + K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 372 EAHE 375
EA+E
Sbjct: 627 EAYE 630
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 264 DYERA-GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNY 322
DY A GF ++ GF D TY +V L + +F ++L+ + +D P Y
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 323 NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVV 378
N LI + + A +++ G +P +T+ +I + + G + A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 379 GSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
G S +++ YS++ K G++ A K+ EM+D+G PN +N
Sbjct: 463 GGLSPDTFT----YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 25/266 (9%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
+V NL +A + K++D + G CQ + + S+ Y+ +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDG--CQPN----TVTYNRLIHSYGRANYL----NEAM 419
Query: 250 NHYNVLMRAVCKKGD---------YERAGFL------VKEMKRSGFDPDMTTYNLLVSCL 294
N +N + A CK + +AGFL + M+ G PD TY+++++CL
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
K G A ++ + P YNI++ L K + A K + G EP
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+T++ V++ G EEA K Y LL L K GN+ A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 415 MMDKGLKPNFSVFNKVRKCLEKKNEI 440
M+ GL+PN N + + N+I
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 67/124 (54%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN++M K +Y+ A L ++M+ +GF+PD TY++++ L G EA V ++
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + +P E Y +L+ L K G + A ++ + G+ P + T +++ ++ + K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 372 EAHE 375
EA+E
Sbjct: 627 EAYE 630
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 264 DYERA-GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNY 322
DY A GF ++ GF D TY +V L + +F ++L+ + +D P Y
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 323 NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVV 378
N LI + + A +++ G +P +T+ +I + + G + A
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 379 GSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
G S +++ YS++ K G++ A K+ EM+D+G PN +N
Sbjct: 463 GGLSPDTFT----YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 16/238 (6%)
Query: 203 VRKIMDVLNEV---GGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR-----KVNHYNV 254
+ K+ D+L E+ G L + +L+E + +GS V + + N Y+V
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ + G Y+ L EMK S DPD TYN+L+ + G F E + + +++
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y +I K G + ARK L +T I P + VI+++ + YEEA
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA- 476
Query: 375 EYVVGSASKQSYSSNAN----YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+V + SN + +SLL + + G + ++ IL ++D G+ N FN
Sbjct: 477 --LVAFNTMHEVGSNPSIETFHSLLYSFA-RGGLVKESEAILSRLVDSGIPRNRDTFN 531
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A +G + A + + M G PD+TTY+ LV K + + C +L +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
LP +YN+L+ K G A ++ G P T++ ++ + + G+Y+
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ + + S + A Y++L + + G + ++M+++ ++P+ + +
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 252 YNVLMRAVCKKG-DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN ++ A + G D+E L EM+ G PD+ TYN L+S G EA V T+
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+P Y+ L+ K + + L ++ G P I ++ ++++Y + G
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 371 EEAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+EA V + NAN YS+L L + G +++ EM P+ + +N
Sbjct: 334 KEAMG-VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 242 IGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGF-DPDMTTYNLLVSCLCKNGKF 300
I K++ +N + ++ + +GD++R+ L K M+R + P+ Y +++S L + G
Sbjct: 98 IFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL 157
Query: 301 AEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
+ +V + + F+Y LI+ ++G+++ + + LD++ + I P ILT+ V
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 361 IKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
I + G E + + + Y+ L + +G A+ + M D G
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 420 LKPNFSVFN 428
+ P+ + ++
Sbjct: 278 IVPDLTTYS 286
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR-KVNHYNVLMRAVCKKGDYERAGFL 271
+GGLC+ + + + E +I K + V Y VL+ K G E A L
Sbjct: 334 IGGLCKEGKL---------NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 272 VKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCK 331
+ M GF PD+ TY+++V+ LCKNG+ EA T D Y+ LI L K
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 332 HGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA- 390
G+ D A + ++++ KG + A+I ++ + K +EA ++
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 504
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
Y++L + K+ A K+ M+DKG+ P + F
Sbjct: 505 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 40/256 (15%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRR-----KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
L+++ D + +V + ++ V+ N L+++ K G E ++ ++MK +G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
+P + TYN L++ L A +V E +E P YN +I CK GQ A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 340 KFLDKITLKGIEPCILTHAAVIKS-------------YFEL------------------- 367
+ L + +G E +T+ +I++ Y E+
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 368 ---GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
GK E + K S + A Y++L + K G++ A ++L+ M+D+G KP+
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 425 SVFNKVRKCLEKKNEI 440
++ V L K +
Sbjct: 398 VTYSVVVNGLCKNGRV 413
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Query: 235 FDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY------- 287
F+++E G+ + + YN +++ CK G ++A +++M+ G + D TY
Sbjct: 245 FEVMES--GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 288 ----------------------------NLLVSCLCKNGKFAEACQVLETVEKDHGLPKE 319
+L++ LCK GK E V E + + P
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 320 FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
Y +LI K G + A + L ++ +G +P ++T++ V+ + G+ EEA +Y
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 380 SASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
++ YS L K G + A+++ EM +KG + +N + K +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 440 I 440
+
Sbjct: 483 V 483
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFT-------FTGSFDIVEYVI 242
L+ L KA V+ ++ + ++E G S LI+ FT F +E
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
G D+ V Y +L+ + K+ E A L M G P + L + LC +GK A
Sbjct: 498 GCDQ-TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
AC++L+ + G+ + +I+ LCK G+ A K D IT +G E +I
Sbjct: 557 ACKILDELAP-MGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 363 SYFELGKYEEA 373
+ ++GK + A
Sbjct: 616 ALRKVGKADLA 626
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C K + A + EM + G PD TY++L+ L K EA Q + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ LP + Y+++I CK + + ++F D++ K ++P + + +I++Y G+
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQ----KILYEMMD-KGLKPN 423
A E K ++A Y+ L KG ++++ K+L+E M +GL+PN
Sbjct: 663 MALELREDMKHKGISPNSATYT-----SLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+V++ CK E EM P+ YN L+ C++G+ + A ++ E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ P Y LI + + + A+ +++ ++G+EP + + A+I Y +LG
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ + + SK + + Y+++ + + GN+ A ++L EM +KG+ P+
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 234 SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+FD+V + D V + + A CK G E A L +M+ +G P++ T+N ++
Sbjct: 248 AFDVVCKGVSPD---VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG 304
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
L G++ EA E + + P Y+IL+ L + + A L ++T KG P
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
++ + +I S+ E G +A E SK +++ Y+ L + K G A+++L
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424
Query: 414 EMMDKGLKPNFSVFNKV 430
EM+ G N F V
Sbjct: 425 EMLSIGFNVNQGSFTSV 441
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ +C+ G + A + KE+ G D +YN L+S C K EA L+ + K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P + Y+ILI L + + A +F D G+ P + T++ +I + + EE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
E+ SK + Y+ L + + G + +A ++ +M KG+ PN + + + K
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 187 GFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDR 246
G LL NL A+ V +R I + + + S + + M + + FD + R
Sbjct: 134 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFD------EEIR 187
Query: 247 RKVNHYNVLMRAVCKKGDYERAG-FLVKE----MKRSGFDPDMTTYNLLVSCLCKNGKFA 301
RK++ ++L+ C + ++R G +L + + G P TT N+L++ L + +F
Sbjct: 188 RKMS--DLLIEVYCTQ--FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ 243
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
+ C+ + V K P + + I+ CK G+ + A K K+ G+ P ++T VI
Sbjct: 244 KCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
G+Y+EA + + + YS+L + + A +L EM KG
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 422 PNFSVFNKV 430
PN V+N +
Sbjct: 363 PNVIVYNNL 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 222 IRLLIEMFTFTGSFDIVEYVIGKDRRKVNH-YNVLMRAVCKKGDYERAGFLVKEMKRSGF 280
I IE + + +I + ++ K + YN L++ CK G + A L+KEM GF
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 281 DPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARK 340
+ + ++ ++ LC + F A + + + + P LIS LCKHG+ A +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
+ KG T A++ E GK +EA + +Y+ L +
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 401 KKGNMLLAQKILYEMMDKGLKPN 423
K + A L EM+ +GLKP+
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPD 574
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+RA C+ G A L ++MK G P+ TY L+ + + EA + E +
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F+Y LI K GQ L ++ K + P +T+ +I Y G
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQK 410
EA + K + Y +LK+G +L A K
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C K + A + EM + G PD TY++L+ L K EA Q + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ LP + Y+++I CK + + ++F D++ K ++P + + +I++Y G+
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQ----KILYEMMD-KGLKPN 423
A E K ++A Y+ L KG ++++ K+L+E M +GL+PN
Sbjct: 663 MALELREDMKHKGISPNSATYT-----SLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+V++ CK E EM P+ YN L+ C++G+ + A ++ E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ P Y LI + + + A+ +++ ++G+EP + + A+I Y +LG
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ + + SK + + Y+++ + + GN+ A ++L EM +KG+ P+
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 234 SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+FD+V + D V + + A CK G E A L +M+ +G P++ T+N ++
Sbjct: 248 AFDVVCKGVSPD---VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG 304
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
L G++ EA E + + P Y+IL+ L + + A L ++T KG P
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
++ + +I S+ E G +A E SK +++ Y+ L + K G A+++L
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424
Query: 414 EMMDKGLKPNFSVFNKV 430
EM+ G N F V
Sbjct: 425 EMLSIGFNVNQGSFTSV 441
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ +C+ G + A + KE+ G D +YN L+S C K EA L+ + K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P + Y+ILI L + + A +F D G+ P + T++ +I + + EE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
E+ SK + Y+ L + + G + +A ++ +M KG+ PN + + + K
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 187 GFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDR 246
G LL NL A+ V +R I + + + S + + M + + FD + R
Sbjct: 134 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFD------EEIR 187
Query: 247 RKVNHYNVLMRAVCKKGDYERAG-FLVKE----MKRSGFDPDMTTYNLLVSCLCKNGKFA 301
RK++ ++L+ C + ++R G +L + + G P TT N+L++ L + +F
Sbjct: 188 RKMS--DLLIEVYCTQ--FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ 243
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
+ C+ + V K P + + I+ CK G+ + A K K+ G+ P ++T VI
Sbjct: 244 KCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI 302
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
G+Y+EA + + + YS+L + + A +L EM KG
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP 362
Query: 422 PNFSVFNKV 430
PN V+N +
Sbjct: 363 PNVIVYNNL 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 222 IRLLIEMFTFTGSFDIVEYVIGKDRRKVNH-YNVLMRAVCKKGDYERAGFLVKEMKRSGF 280
I IE + + +I + ++ K + YN L++ CK G + A L+KEM GF
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 281 DPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARK 340
+ + ++ ++ LC + F A + + + + P LIS LCKHG+ A +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
+ KG T A++ E GK +EA + +Y+ L +
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 401 KKGNMLLAQKILYEMMDKGLKPN 423
K + A L EM+ +GLKP+
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPD 574
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+RA C+ G A L ++MK G P+ TY L+ + + EA + E +
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F+Y LI K GQ L ++ K + P +T+ +I Y G
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQK 410
EA + K + Y +LK+G +L A K
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 140/356 (39%), Gaps = 9/356 (2%)
Query: 83 AKQVSEIVALIR---EGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKG 139
A +V +I ++R V LE +LN + L LI+ + +FF W
Sbjct: 64 AGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWAT- 122
Query: 140 SHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKAST 199
P ++ + A+ ++ E L +L+ A+
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANM 182
Query: 200 VECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRK----VNHYNVL 255
V+ +++D + + G L++ GS V R K + ++ L
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSL 242
Query: 256 MRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG 315
+ C++G A ++ +MK +G +PD+ + L+S GK A+A ++ + K
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 316 LPKEFNYNILISLLCK-HGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y +LI LC+ + D A + ++ G E I+T+ A+I + + G ++ +
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ K S Y + H KK +++ +M +G P+ ++N V
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK-FAEACQVLETVEKD 313
L+ G A L+ +M++ GF+P++ Y +L+ LC+ K EA +V +E+
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
Y LIS CK G D LD + KG+ P +T+ ++ ++ + ++EE
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
E + + + Y+++ L K G + A ++ EM GL P F
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 249 VNHYNVLMRAVCK-KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
VN Y VL++A+C+ + + A + EM+R G + D+ TY L+S CK G + VL
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ + K +P + Y ++ K QF+ + ++K+ +G P +L + VI+ +L
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425
Query: 368 GKYEEA 373
G+ +EA
Sbjct: 426 GEVKEA 431
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 213 VGGLCQSS-----GIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYER 267
+ LC++ +R+ +EM + DIV Y L+ CK G ++
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT------------ALISGFCKWGMIDK 360
Query: 268 AGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILIS 327
++ +M++ G P TY ++ K +F E +++E +++ P YN++I
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 328 LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYS 387
L CK G+ A + +++ G+ P + T +I + G EA + S+ +S
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 388 SNANYSLLATL 398
+ Y L +L
Sbjct: 481 A-PQYGTLKSL 490
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ ++CK A KE++R G P++ TY LV+ LC + ++++A ++L +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P Y+ L+ K+G+ A++ +++ I+P I+T++++I + +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA++ SK + +Y+ L K + K+ EM +GL N +N
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y L+ +C + A L+ +M + P++ TY+ L+ KNGK EA +
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ E + + P Y+ LI+ LC H + D A + D + KG ++++ +I +
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + E+ + + + S+ Y+ L + G++ AQ+ +M G+ P+
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 426 VFN 428
+N
Sbjct: 402 TYN 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R + +N+++ C A ++ +M + G++PD T LV+ C+ + ++A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+++ + + P YN +I LCK + + A F +I KGI P ++T+ A++
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
++ +A + K+ + YS L +K G +L A+++ EM+ + P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 426 VFNKV 430
++ +
Sbjct: 297 TYSSL 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 8/211 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC I +MF S + V+ YN L+ CK E L
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVV--------SYNTLINGFCKAKRVEDGMKLF 353
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+EM + G + TYN L+ + G +A + ++ P + YNIL+ LC +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ + A + + + ++ I+T+ VI+ + GK EEA + K Y
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ + + KG + + + +M +GL N
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 213 VGGLCQSS----GIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
V GLC SS RLL +M + +++ Y+ L+ A K G A
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVI------------TYSALLDAFVKNGKVLEA 279
Query: 269 GFLVKEMKRSGFDPDMTTY-----------------------------------NLLVSC 293
L +EM R DPD+ TY N L++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
CK + + ++ + + + YN LI + G D A++F ++ GI P
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
I T+ ++ + G+ E+A ++ Y+ + K G + A +
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 414 EMMDKGLKPNFSVFN 428
+ KGLKP+ +
Sbjct: 460 SLSLKGLKPDIVTYT 474
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN++M A + G +R L+ EM + GF PD+ TYN+L+ L K A +L +
Sbjct: 260 YNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMR 319
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P ++ LI L + G+ + + F+D+ G P ++ + +I Y G+ E
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELE 379
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E K + Y+ + G A +L EM +G PNF V++ +
Sbjct: 380 KAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Query: 432 KCLEKKNEI 440
L+ ++
Sbjct: 440 NNLKNAGKV 448
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Query: 217 CQSSGI-RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM 275
C +G+ R ++E F + +F+ Y + YN ++ ++ Y+ ++ ++M
Sbjct: 197 CGEAGLARDVVEQFIKSKTFNYRPYK--------HSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 276 KRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
GF PD+ TYN+++ + GK ++L+ + KD P + YNIL+ L +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLL 395
A L+ + G+EP ++ +I GK E ++ + Y+++
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 396 ATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
T ++ G + A+++ EM +KG PN +N +
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V H+ L+ + + G E + + E + G PD+ Y ++++ G+ +A ++ +
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + LP F YN +I C G+F A L ++ +G P + ++ ++ + G
Sbjct: 387 EMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Query: 369 KYEEAHEYVVGSASKQSY 386
K EAHE V K Y
Sbjct: 447 KVLEAHEVVKDMVEKGHY 464
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R N Y++LM+ + G+Y+ L+ EM + G+ T+NLL+ C C G+ A
Sbjct: 149 RHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTC--GEAGLARD 205
Query: 306 VLETVEKDHGL---PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
V+E K P + +YN ++ L Q+ L +++ G P +LT+ V+
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQ-KILYEMMDKGLK 421
+ F LGK + + ++ K +S + + HL GN LA +L M + G++
Sbjct: 266 ANFRLGKTDRLYR-LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 422 P 422
P
Sbjct: 325 P 325
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ S ++ ++M D+++ V G R V+ Y L++A+C+ G+ A L
Sbjct: 194 IHGLCKDSRVKEALKM-----KHDMLK-VYGV-RPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
E D Y+ L+S L K G+ E +LE + + P YN+LI+ C
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-N 391
+ A + LD++ KG++P ++++ ++ +F + K+EEA Y+ ++ S + +
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT-YLFEDMPRRGCSPDTLS 365
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
Y ++ + A IL EM+ KG KP
Sbjct: 366 YRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ + G ++ A L EM + P T+ L+ LCK+ + EA ++ +
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K +G+ P Y LI LC+ G+ A K D+ I+ ++ +I S + G+
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
E + + K Y++L + + A ++L EM++KGLKP+ +N +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKF 341
PD TYN+L+ ++G F +A ++ + + K P + LI LCK + A K
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 342 L-DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
D + + G+ P + +A++IK+ ++G+ A + + + A YS L + +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 401 KKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK--CLEKKNE 439
K G IL EM +KG KP+ +N + C+E +E
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +++R CK+ E A +M SG PD Y L++ K ++L+
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P YN LI L+ + + +K+ IEP I T ++KSYF
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
YE K + +Y++L + +G A + L EM+DKG+K +N
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Query: 429 K 429
K
Sbjct: 547 K 547
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 43/369 (11%)
Query: 84 KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPE 143
K + E+ AL R ++E L+ + + LS LIVE+ R A +FF W
Sbjct: 135 KVIDELFALDR----NMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCW-AAERQG 189
Query: 144 LCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECV 203
D + +E MV +L E + G L T+E
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK---------GLL---------TMETF 231
Query: 204 RKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIG------------------KD 245
M ++ GI L++ + F + + ++ K+
Sbjct: 232 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 291
Query: 246 RRKVN--HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
R N Y VL+ C+ + A + +M G PD+ +N+++ L ++ K ++A
Sbjct: 292 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
++ ++ P +Y I+I CK + A ++ D + G++P + +I
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ K + +E + K Y+ L L + +I +M+ ++P+
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 424 FSVFNKVRK 432
FN + K
Sbjct: 472 IHTFNMIMK 480
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y +++R CK+ E A +M SG PD Y L++ K ++L+
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+++ P YN LI L+ + + +K+ IEP I T ++KSYF
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
YE K + +Y++L + +G A + L EM+DKG+K +N
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 429 K 429
K
Sbjct: 548 K 548
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 136/369 (36%), Gaps = 43/369 (11%)
Query: 84 KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPE 143
K + E+ AL R ++E L+ + + LS LIVE+ R A +FF W
Sbjct: 136 KVIDELFALDR----NMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCW-AAERQG 190
Query: 144 LCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECV 203
+ +E MV +L E + G L T+E
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK---------GLL---------TMETF 232
Query: 204 RKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIG------------------KD 245
M ++ GI L++ + F + + ++ K+
Sbjct: 233 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 292
Query: 246 RRKVN--HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
R N Y VL+ C+ + A + +M G PD+ +N+++ L ++ K ++A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
++ ++ P +Y I+I CK + A ++ D + G++P + +I
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ K + +E + K Y+ L L + +I +M+ ++P+
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Query: 424 FSVFNKVRK 432
FN + K
Sbjct: 473 IHTFNMIMK 481
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L C ++ +++M+ GF+PD+ TYN LVS C+ G+ EA + + +
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P Y LI LCK G+ A + ++ +GI+P +++ +I +Y + G +
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 372 EA----HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
++ HE + S ++ ++ +++G +L A + E+
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTC----KVIVEGFVREGRLLSAVNFVVEL 402
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+++L++ K G E + +E+ SGF + T N L++ L K + QV +
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + +NIL ++ C F FL+K+ +G EP ++T+ ++ SY G+ +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA ++ Y+ L K G + A + + M+D+G+KP+ +N
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 231 FTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD-MTTYN 288
+G+++++ ++ K V Y +L+ C+ G+ + L+K+M GF+ + + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 289 LLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK 348
+++S LCK G+ EA + ++ D P Y+I+I LCK G+FD+A D++ K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 349 GIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLA 408
I P TH A++ + G EA + S Y+++ + K G + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 409 QKILYEMMDKGLKPNFSVFNKV 430
++ +++ G+ P+ + FN +
Sbjct: 488 LELFKVVIETGITPSVATFNSL 509
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+V++ +CK G + A L +MK G PD+ Y++++ LCK GKF A + + +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
LP + L+ LC+ G AR LD + G I+ + VI Y + G EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
A E S A ++ L + K N+ A+KIL + GL P+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 233 GSFDIVEYVIGK--DRRKVNH---YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY 287
G FD+ ++ + D+R + + + L+ +C+KG A L+ + SG D+ Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 288 NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITL 347
N+++ K+G EA ++ + V + P +N LI CK ARK LD I L
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 348 KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKG---- 403
G+ P ++++ ++ +Y G + E ++ +N YS++ L +G
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK-GLCRGWKHE 590
Query: 404 --NMLLAQKI-------LYEMMDKGLKPNFSVFNKV 430
N +L ++I L +M +G+ P+ +N +
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK--------- 299
V Y LM A G+ + L +EMK G P TY+++ LC+ K
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 300 ---FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
F + Q L +E + P + YN +I LC+ A FL+ + + ++ T
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+ +I S G +A ++ + S Y+ L H KG+ +A K+ ++++
Sbjct: 658 YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 417 DKGLKPNFSVFNKV 430
+G + ++ V
Sbjct: 718 HRGFNVSIRDYSAV 731
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 244 KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
KD+ + + Y+ ++ +C++ E A ++ + P + ++N ++S CK G A
Sbjct: 183 KDKNE-HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
TV K +P +++NILI+ LC G A + + G+EP +T+ + K
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ LG A E + K Y++L + GN+ + +L +M+ +G + N
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 196 KASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH---- 251
K + RKI+DV+ G L++ + G+ ++ + RR++
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL----RREMKAEGIP 570
Query: 252 -----YNVLMRAVCKKGDYERAGFLVKE------------MKRSGFDPDMTTYNLLVSCL 294
Y+V+ + +C+ +E +++E M+ G PD TYN ++ L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
C+ + A LE ++ + YNILI LC +G A F+ + + +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 355 LTHAAVIKSYFELGKYEEA 373
+ +IK++ G E A
Sbjct: 691 FAYTTLIKAHCVKGDPEMA 709
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ + K G E A +K M +G++PD TY L++ +C+ G+ A +LE +E
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P + YN L+ LCK D + + + G++ +A +++S + GK
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVA 422
Query: 372 EAHEYVVGSASKQSYSSNANYSLLAT 397
EA+E + +S S + YS L T
Sbjct: 423 EAYEVFDYAVDSKSLSDASAYSTLET 448
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFD--PDMTTYNLLVSCLCKNGKFAEACQVLET 309
YN L++ +CK D V EM R FD PD+ ++ +L+ +C + EA ++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ P F YN ++ C + A K+ +G+EP +T+ +I + G+
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EEA Y+ A Y+ L +KG L A +L EM +G PN +N
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYN 374
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +L+ VC + A +LV ++ +GF PD YN ++ C K +EA V + ++
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P + YN LI L K G+ + AR +L + G EP T+ +++ G+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLH-LKKGNMLLAQKILYEMM 416
A + ++ ++ Y+ L LH L K ++ LYEMM
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTL--LHGLCKARLMDKGMELYEMM 396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 254 VLMRAVCKKGDYERAGF--LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+L+ C+ D + ++ M +G +PD T ++ V LC+ G+ EA +++ +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK-GIEPCILTHAAVIKSYFELGKY 370
+ H P + YN L+ LCK + +F+D++ ++P +++ +I +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 371 EEAHEYVVGSASKQSYSSNA---NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA Y+V + + N + L KG+ A + +M ++G++P+ +
Sbjct: 247 REAM-YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE--AVGVYKKMKEEGVEPDQITY 303
Query: 428 N 428
N
Sbjct: 304 N 304
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+KG A L M +SG P++ T+N L+ C+ K EA +V ++
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI+ + G ++A +F + + GI+ ILT+ A+I + K
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A ++V + +++ +S L + N ++ M+ G PN FN
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N M ++ +G + A +EM+R P+ T N+++S C++GK + ++L+ +E+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ +YN LI+ C+ G A K + + G++P ++T +I + K +E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 373 AHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A + V G + + N Y+ L + ++G+ +A + +M+ G++ + +N
Sbjct: 327 ASK-VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ ++GD+E A ++M +G D+ TYN L+ LCK K +A Q ++ ++
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELD 405
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K++ +P ++ LI C D + + G P T ++ ++ ++
Sbjct: 406 KENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFD 465
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLK-KGNMLLAQKILYEMMDK 418
A + V+ ++S ++ LK +G L +K+L EM K
Sbjct: 466 GASQ-VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
+R + YN L+ +CK+ +A VKE+ + P+ +T++ L+ C +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
+ +++ + P E +N+L+S C++ FD A + L ++ + I
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C+KG A L M +SG P++ T+N L+ C+ K EA +V ++
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI+ + G ++A +F + + GI+ ILT+ A+I + K
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A ++V + +++ +S L + N ++ M+ G PN FN
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N M ++ +G + A +EM+R P+ T N+++S C++GK + ++L+ +E+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ +YN LI+ C+ G A K + + G++P ++T +I + K +E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 373 AHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A + V G + + N Y+ L + ++G+ +A + +M+ G++ + +N
Sbjct: 327 ASK-VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ ++GD+E A ++M +G D+ TYN L+ LCK K +A Q ++ ++
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELD 405
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K++ +P ++ LI C D + + G P T ++ ++ ++
Sbjct: 406 KENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFD 465
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLK-KGNMLLAQKILYEMMDK 418
A + V+ ++S ++ LK +G L +K+L EM K
Sbjct: 466 GASQ-VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
+R + YN L+ +CK+ +A VKE+ + P+ +T++ L+ C +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
+ +++ + P E +N+L+S C++ FD A + L ++ + I
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN + A+ K L ++MK+ G PD+ TYN+L++ + G+ EA + E +E
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +YN LI+ L K+G D A ++ KG+ P ++T++ +++ + + + E
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN---FSVFN 428
A+ K + Y++L K G A + +M +GL P+ ++V
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 429 KVRKCLEKKNEI 440
+++ K+ I
Sbjct: 625 RLQSVSHGKSRI 636
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
+ Y ++ ++C G A ++ ++ G D YN + S L K + + + E
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
++KD P F YNILI+ + G+ D A +++ +P I+++ ++I + G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
+EAH K YS L K + +A + EM+ KG +PN +N
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 430 VRKCLEK 436
+ CLEK
Sbjct: 588 LLDCLEK 594
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 203 VRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH--YNVLMRAVC 260
VR I+D + + S + +LI F T + ++ K K+N Y L++A
Sbjct: 155 VRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYL 214
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
+ DY +A + E++R G D+ YN+L+ L K+ K ACQV E ++K H E+
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEY 271
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
Y I+I + + G+ D A +++ +G+ ++ + +++ + ++A +
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 381 ASKQSYSSNANYSLLATLHLKKGNML 406
+ YSLL L + +G ++
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLV 357
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
RR Y +++R + + G + A L EM G ++ YN L+ L K +A Q
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQ---FDLARKFLDKITLKGIEPCILTHAAVIK 362
V + + P E+ Y++L++LL GQ D + + +GI ++ +++
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVR 380
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+ +LG EAH S +Y S+L +L G + A ++L ++ +KG+
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL-CGAGKTIEAIEMLSKIHEKGVV 439
Query: 422 PNFSVFNKVRKCLEKKNEI 440
+ ++N V L K +I
Sbjct: 440 TDTMMYNTVFSALGKLKQI 458
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VL++A+C +G ++A L EM G P++ TY +L+ LC++GK EA V +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
KD P YN LI+ CK G+ A + L + + +P + T +++ +GK
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A + +Y++L ++G+M A K+L M ++P+ F +
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ +C+ G E A L +M G P TY +L+ LC G +A + + +
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y +LI LC+ G+ + A K+ I P ++T+ A+I Y + G+
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A E + + + ++ L + G A +L M+D GL P+ +N
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYN 445
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 244 KDR--RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
KDR V YN L+ CK G A L+ M++ P++ T+N L+ LC+ GK
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 302 EACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
+A +L+ + D+GL P +YN+LI LC+ G + A K L + IEP LT A+
Sbjct: 424 KAVHLLKRM-LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 361 IKSYFELGKYEEAHEYV 377
I ++ + GK + A ++
Sbjct: 483 INAFCKQGKADVASAFL 499
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V +N LM +C+ G +A L+K M +G PD+ +YN+L+ LC+ G A ++L
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ P + +I+ CK G+ D+A FL + KGI +T +I ++G
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 369 KYEEA 373
K +A
Sbjct: 526 KTRDA 530
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKF 341
P+ +Y++L+ LC+ G+ EA + + + + P Y +LI LC G D A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
D++ +G +P + T+ +I GK EEA+ + + S Y+ L + K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 402 KGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
G ++ A ++L M + KPN FN++ + L
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
NV++ + K + ++ ++ + G P + TY LV L ++G + ++LE ++
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
LP + Y I+I+ LC+ G+ + A K L + G+ P +T+ ++K Y GK +
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 373 AHEYV 377
A E V
Sbjct: 670 ALETV 674
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 8/220 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ GLC+ + ++ + FDI + + ++ A CK+G + A +
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCL--------TFTAIINAFCKQGKADVASAFL 499
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
M R G D T L+ +CK GK +A +LET+ K L + N+++ +L K
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ L KI G+ P ++T+ ++ G + + + Y
Sbjct: 560 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+++ + G + A+K+L M D G+ PN + + K
Sbjct: 620 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ I L + + + + + V +N ++ ++CK E A L
Sbjct: 230 VNGLCKRGDIDLALNLLN--------KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM+ G P++ TYN L++CLC G++++A ++L + + P +N LI K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K +++ + I+P +T+ +I + + +EA + SK + Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ L K + ++ EM +GL N + +
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+GD + A L+ +M+ + ++ +N ++ LCK A + +E
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN LI+ LC +G++ A + L + K I P ++T A+I ++F+ GK
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + Y+LL + A+++ M+ K PN +N +
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ LC+ + + +++FT + I R V YN L+ +C G + A L+
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGI--------RPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
M +P++ T+N L+ K GK EA ++ E + + P YN+LI+ C H
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+ D A++ + K P I T+ +I + + + E+ E + + + Y
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 393 SLLATLHLKKGNMLLAQKILYEMM 416
+ + + G+ AQ + +M+
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+ A K+G A L +EM + DPD TYNLL++ C + + EA Q+ + +
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
LP YN LI+ CK + + + +++ +G+ +T+ +I+ +F+ G +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A S + + YS+L G + A I + ++ N ++N +
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 432 KCLEKKNEIG 441
+ + K ++G
Sbjct: 511 EGMCKAGKVG 520
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P Y +++ LCK G DLA L+K+ I+ ++ +I S + E A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ +K + Y+ L G A ++L M++K + PN FN +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N L+ AV K +E L ++M+ G D+ TY++ ++C C+ + + A VL +
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + L++ C + A +D++ G +P T +I F K
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA V + Y + K+G++ LA +L +M +K N +FN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 105/259 (40%), Gaps = 19/259 (7%)
Query: 176 HRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSF 235
H R+ + F F++ + +C+ I + G C+ + +E+F
Sbjct: 376 HNRLDEAKQMFKFMV--------SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 236 DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
+V + Y +++ + GD + A + K+M + D+ TY++L+ LC
Sbjct: 428 GLVGNTV--------TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
GK A + + ++K F YN +I +CK G+ A +++K P ++
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVV 536
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
T+ +I +EA + + ++ Y+ L +L+ + + +++ EM
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 416 MDKGLKPNFSVFNKVRKCL 434
G + S + V L
Sbjct: 597 RSSGFVGDASTISLVTNML 615
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 231 FTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD-MTTYN 288
+G+++++ ++ K V Y +L+ C+ G+ + L+K+M GF+ + + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 289 LLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK 348
+++S LCK G+ EA + ++ D P Y+I+I LCK G+FD+A D++ K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 349 GIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLA 408
I P TH A++ + G EA + S Y+++ + K G + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 409 QKILYEMMDKGLKPNFSVFNKV 430
++ +++ G+ P+ + FN +
Sbjct: 488 LELFKVVIETGITPSVATFNSL 509
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+V++ +CK G + A L +MK G PD+ Y++++ LCK GKF A + + +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
LP + L+ LC+ G AR LD + G I+ + VI Y + G EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
A E S A ++ L + K N+ A+KIL + GL P+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 233 GSFDIVEYVIGK--DRRKVNH---YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY 287
G FD+ ++ + D+R + + + L+ +C+KG A L+ + SG D+ Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 288 NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITL 347
N+++ K+G EA ++ + V + P +N LI CK ARK LD I L
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 348 KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKG---- 403
G+ P ++++ ++ +Y G + E ++ +N YS++ L +G
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK-GLCRGWKHE 590
Query: 404 --NMLLAQKI-------LYEMMDKGLKPNFSVFNKV 430
N +L ++I L +M +G+ P+ +N +
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGK--------- 299
V Y LM A G+ + L +EMK G P TY+++ LC+ K
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 300 ---FAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT 356
F + Q L +E + P + YN +I LC+ A FL+ + + ++ T
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+ +I S G +A ++ + S Y+ L H KG+ +A K+ ++++
Sbjct: 658 YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 417 DKGLKPNFSVFNKV 430
+G + ++ V
Sbjct: 718 HRGFNVSIRDYSAV 731
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 244 KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
KD+ + + Y+ ++ +C++ E A ++ + P + ++N ++S CK G A
Sbjct: 183 KDKNE-HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
TV K +P +++NILI+ LC G A + + G+EP +T+ + K
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ LG A E + K Y++L + GN+ + +L +M+ +G + N
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 196 KASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH---- 251
K + RKI+DV+ G L++ + G+ ++ + RR++
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL----RREMKAEGIP 570
Query: 252 -----YNVLMRAVCKKGDYERAGFLVKE------------MKRSGFDPDMTTYNLLVSCL 294
Y+V+ + +C+ +E +++E M+ G PD TYN ++ L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
C+ + A LE ++ + YNILI LC +G A F+ + + +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 355 LTHAAVIKSYFELGKYEEA 373
+ +IK++ G E A
Sbjct: 691 FAYTTLIKAHCVKGDPEMA 709
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 145/387 (37%), Gaps = 36/387 (9%)
Query: 64 RRYFSSYPCSSFKGR-----PYASAKQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVE 118
+R FS C+S G P SA I++ D +F L+ + L+
Sbjct: 2 KRLFSKSLCTSAAGANLKPPPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNS 61
Query: 119 IFHILASERVSALQFFHWLKGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRR 178
+ L + ALQFFH+L H E D + + +++ R
Sbjct: 62 VLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLR 121
Query: 179 VHLGRNAFGFL---------------LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIR 223
+ F + L LN+ + C + + + LC+S +
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHG---CFQDLASFNTILDVLCKSKRVE 178
Query: 224 LLIEMF-TFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDP 282
E+F G F + YNV++ C +A ++KEM G +P
Sbjct: 179 KAYELFRALRGRFSVDTVT----------YNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 283 DMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFL 342
++TTYN ++ + G+ A + ++K Y ++ G+ AR
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 343 DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLK 401
D++ +G+ P + T+ A+I+ + E A + ++ Y N Y++L
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENA-VVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 402 KGNMLLAQKILYEMMDKGLKPNFSVFN 428
G ++++ M ++G +PNF +N
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYN 374
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN +++ +CKK + E A + +EM R G++P++TTYN+L+ L G+F+ ++++
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+E + P YN++I + + + A +K+ P + T+ +I F
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Query: 369 KYEE 372
+ E+
Sbjct: 420 RSED 423
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 36/224 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ +CK G + A L EM PD YN+ + CK GK + A +VL+ +E
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 312 KD-------------------------HGLPKEF----------NYNILISLLCKHGQFD 336
K HGL E YN I LC+ + +
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A LD++ K I P + + +I+++ ++ ++ A E V +A YSL+
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE-VFETAVSICGQKEGLYSLMF 705
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
L G +L A ++L ++D+G + ++ + + L KK+E+
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 20/238 (8%)
Query: 193 NLDKASTVECVRK---IMDVL---NEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDR 246
N D VE +R+ + D++ + + LC+ + +F+ ++ EY +G R
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS---DMELDEY-LGLPR 288
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
YN++++ CK G E A L + ++ + + +YN+ + L ++GKF EA V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 307 LETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
L+ + D G+ P ++YNIL+ LCK G A+ + + G+ P +T+ ++ Y
Sbjct: 349 LKQM-TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 366 ELGKYEEA----HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
+GK + A E + + +Y+ N LL +L K G + A+++L +M +KG
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNI---LLHSL-WKMGRISEAEELLRKMNEKG 461
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 28/261 (10%)
Query: 196 KASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRK-----VN 250
K +E + + + + E L + ++ G F E V+ + K +
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN+LM +CK G A +V MKR+G PD TY L+ C GK A +L+ +
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+++ LP + NIL+ L K G+ A + L K+ KG +T ++ G+
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 371 EEAHEYVV-----GSASKQSYSSN------------------ANYSLLATLHLKKGNMLL 407
++A E V GSA+ + ++ YS L K G
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 408 AQKILYEMMDKGLKPNFSVFN 428
A+ + EMM + L+P+ +N
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYN 563
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 39/216 (18%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+RA+C + A L EM G P+ T+ +LV CK G + ++L +E
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI----------------- 354
LP + YN ++S C+ G+ D + K ++K+ +G+ P I
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 355 ----------------------LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
+T+ ++K + ++G E+A +S +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ ++ G + A+ +L +M DKG+ P+ +N
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 235 FDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL 294
F +V +++ V YN+L+ + K+ E +L K+M G P T+NLL+ L
Sbjct: 98 FQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRAL 157
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
C + A ++ + + + P EF + IL+ CK G D + L+ + G+ P
Sbjct: 158 CDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK 217
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+ + ++ S+ G+ +++ + V + ++ + K+G +L A +I +
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSD 277
Query: 415 M-MDKGL---KPNFSVFNKVRK 432
M +D+ L +PN +N + K
Sbjct: 278 MELDEYLGLPRPNSITYNLMLK 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFD-----------------------PDMTTYNL 289
N+++ +C G+ ++A +VK M+ G PD+ TY+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
L++ LCK G+FAEA + + + P YNI I CK G+ A + L + KG
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 350 IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLL-A 408
+ T+ ++I + E H ++ ++ S N A +L +G + A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHG-LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648
Query: 409 QKILYEMMDKGLKPNFSVF 427
+L EMM K + PN F
Sbjct: 649 TNLLDEMMQKNIAPNVFSF 667
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
+ + YN L+ + K L+ EMK G P++ TYN + LC+ K +A +
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARK-FLDKITLKGIEPCILTHAAVIKSYF 365
L+ + + + P F++ LI CK FD+A++ F +++ G + + ++ +
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELL 709
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
G+ +A E + + Y L KK + +A IL++M+D+G
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL----PKEFNYNILISLLCKHGQFDL 337
P + YNLL+ K + + + + KD L P+ + +N+LI LC D
Sbjct: 110 PSVYLYNLLLESCIKERRV----EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
AR+ D++ KG +P T +++ Y + G ++ E + S + Y+ + +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 398 LHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
++G ++K++ +M ++GL P+ FN L K+ ++
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
+++ +C++G+ E++ L+KE G P+ TYN +++ K F+ VL+ ++KD
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
+ + Y +L+ L K+G+ A K D++ +GIE + + ++I G + A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
K S+ Y L K G M A+ ++ EM KG+ VFN
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ VCK G+ A L+ EM+ G + +N L+ C+ G EA + + +E
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ F N + S + ++D A+++L ++ G++ +++ +I Y + G E
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA V +SK + Y+++ + K+G + A+K+ M G+ P+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ CK+G+ E A L EM G P+ TYN+++ CK GK EA ++ +E
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + Y LI C D A + ++ LKG++ +T+ +I + GK +
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 372 EA 373
EA
Sbjct: 592 EA 593
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ A K+ D+ ++K MK+ G + TY LL+ KNGK ++A ++ + +
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM- 320
Query: 312 KDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
++ G+ + + Y LIS C+ G A D++T KG+ P T+ A+I ++G+
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMD-KGLKPNFSVFNK 429
A + SK + ++ L + +KG M+ ++Y++M+ KG + + N
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG-MVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 430 VRKCLEK 436
+ C +
Sbjct: 440 IASCFNR 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 35/212 (16%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +LM K G A L EM+ G + D+ Y L+S C+ G A + + +
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 312 KDHGLPKEFNY-----------------------------------NILISLLCKHGQFD 336
+ P + Y N LI C+ G D
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A D + KG + + T + + L +Y+EA +++ S +Y+ L
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLI 476
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ K+GN+ A+++ EM KG++PN +N
Sbjct: 477 DVYCKEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 39/218 (17%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL----------------- 294
+N L+ C+KG + A + M++ GF D+ T N + SC
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 295 ------------------CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
CK G EA ++ + P YN++I CK G+
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
ARK + G++P T+ ++I +EA K ++ Y+++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ K G A + EM KG +++ NKV L
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKG----YTIDNKVYTAL 615
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 320 FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
++ I++ LC+ G+ + ++K + + ++KGI+P T+ +I +Y + + E V+
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF-SGVEGVLK 283
Query: 380 SASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
K N Y+LL L +K G M A+K+ EM ++G++ + V+
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+S+ + L +EM S ++ + + Y L+ CKK D + A L
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMEL--------KLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
E+ G P+++ YN L+S GK A + + + D F Y +I L K
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G +LA ++ GI P + H ++ + G++ +A + + K + Y
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
S + H ++GN+ A ++ EM++KG+ + +VFN
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +M A C+ + + A + EM G +P+ TY++L+ KN A V+ +
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDK-ITLKGIEPCILTHAAVIKSYFELGKY 370
+ E YN +I+ LCK GQ A++ L I K ++ ++I + ++G
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ A E + + ++ L K M LA ++ +EM LK + + +
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 431 RKCLEKKNEI 440
KKN++
Sbjct: 667 IDGFCKKNDM 676
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
Query: 260 CKKGDYERAGFLVKEMKRSGFDPDMTTYN--LLVSCLCKNGKFAEACQVLETVEKDHGL- 316
CK+G + A +K M++ G +P++ YN +L C KN A + E +EK GL
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI-FSEMLEK--GLE 516
Query: 317 PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEY 376
P F Y+ILI K+ A ++++ E + + +I ++G+ +A E
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 377 VVGSASKQSYS-SNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLE 435
+ ++ YS S +Y+ + +K G+ A + EM + G PN F +
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 436 KKNEI 440
K N +
Sbjct: 637 KSNRM 641
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 36/261 (13%)
Query: 199 TVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH--YNVLM 256
V+ R++M E GL S ++ + + D++ + GK + Y ++
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 257 RAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL 316
A K+G+ E A ++ EM G + LV+ CK + +A + +E++
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 317 PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP-CILTHA---------------AV 360
P + +++++ CK+ + + A +F ++ I P +L H +
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 361 IKSYFE------------------LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKK 402
FE GK + A ++ K + Y+ + H +
Sbjct: 438 FNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM 497
Query: 403 GNMLLAQKILYEMMDKGLKPN 423
NM LA+ I EM++KGL+PN
Sbjct: 498 KNMDLARSIFSEMLEKGLEPN 518
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 67/179 (37%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ L+ CK + A + EMK D+ Y L+ CK A + +
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P YN LIS G+ D A K+ GI + T+ +I + G
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 747
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A + + +L KKG L A K+L EM K + PN +++ V
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%)
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L+ M + G PD+ TY +V+ LCK G A +L +E Y+ +I LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
K+ D A ++ KG+ P ++T++++I G++ +A + ++ +
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+S L +KKG ++ A+K+ EM+ + + PN ++ +
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
V GLC+ L + + + I V+ Y+ ++ ++CK + A L
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVV--------IYSTVIDSLCKYRHEDDALNLF 276
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
EM+ G P++ TY+ L+SCLC G++++A ++L + + P ++ LI K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G+ A K +++ + I+P I T++++I + L + EA + + K + Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ L K + ++ EM +GL N
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N L+ C A LV +M G+ PD T+ L+ L + K +EA +++ + +
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P Y +++ LCK G DLA L+K+ IE ++ ++ VI S + ++
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A +K + YS L + G A ++L +M+++ + PN F+ +
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 433 CLEKKNEI 440
KK ++
Sbjct: 332 AFVKKGKL 339
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 247 RKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
RK+N ++ L+ A KKG +A L +EM + DP++ TY+ L++ C + E
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A Q+LE + + LP YN LI+ CK + D + +++ +G+ +T+ +I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+F+ + A S + + Y++L K G + A + + ++P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 423 NFSVFN 428
+ +N
Sbjct: 497 DIYTYN 502
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ +CK+GD + A L+ +M+ + + ++ Y+ ++ LCK +A + +E
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y+ LIS LC +G++ A + L + + I P ++T +A+I ++ + GK
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+A E + K+S N YS L + A+++L M+ K PN +N +
Sbjct: 341 KA-EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 201 ECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVC 260
+C+ ++ + G C++ + +E+F +V + Y L+
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV--------TYTTLIHGFF 439
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
+ D + A + K+M G P++ TYN+L+ LCKNGK A+A V E +++ P +
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 321 NYNILISLLCKHGQFDLA 338
YNI+I +CK G++ +
Sbjct: 500 TYNIMIEGMCKAGKWKMG 517
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ L+ +C G + A L+ +M +P++ T++ L+ K GK +A +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ E + K P F Y+ LI+ C + A++ L+ + K P ++T+ +I +
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ + ++ E + + + Y+ L + + AQ + +M+ G+ PN
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 426 VFN 428
+N
Sbjct: 465 TYN 467
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 16/280 (5%)
Query: 166 AMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLL 225
A P+ F RR G+ ++ + VL S +E + D + G + QS +
Sbjct: 24 ATFPLSFSFCRRRAFSGKTSYDYREVLR-TGLSDIE----LDDAIGLFGVMAQSRPFPSI 78
Query: 226 IE---MFTFTGSFDIVEYVIGKDRR----KVNH----YNVLMRAVCKKGDYERAGFLVKE 274
IE + + + + VI + ++H YN+L+ C+ A L+ +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
M + G++PD+ T N L++ C + ++A +++ + + P + LI L H +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSL 394
A +D++ +G +P ++T+ AV+ + G + A + + + ++ YS
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 395 LATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ K + A + EM +KG++PN ++ + CL
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 237 IVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
++E +I KD V YN L+ CK ++ L +EM + G + TY L+
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
+ A V + + P YNIL+ LCK+G+ A + + +EP I
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQ 384
T+ +I+ + GK++ Y V SA K+
Sbjct: 500 TYNIMIEGMCKAGKWKMGGIYFVASALKE 528
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y + A CK+GD+ R +++EM+ +G +P++ TY +++ L K+ + AEA V E ++
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D +P Y+ LI +L K G+F A + + +T +G+ +L + +I + + E
Sbjct: 371 EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE 430
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATL 398
A + ++ S + N A L
Sbjct: 431 MALRLLKRMEDEEGESCSPNVETYAPL 457
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+ CK ++ A ++ MK + F PD+ TY V CK G F ++LE +
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P Y I++ L K Q A +K+ G P ++++I + G+++
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFK 395
Query: 372 EAHEYVVGSASKQSYSSNA---NYSLLATLHLKKGNMLLAQKILYEMMD---KGLKPNFS 425
+A E + + Q + N + A LH + M L ++L M D + PN
Sbjct: 396 DAAE-IFEDMTNQGVRRDVLVYNTMISAALHHSRDEMAL--RLLKRMEDEEGESCSPNVE 452
Query: 426 VF 427
+
Sbjct: 453 TY 454
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFD---PDMTTYNLLVSCLCKNGKFAEACQVLET 309
N LM A+ K+ E A + ++ FD PD T+N+L+ CK KF +A +++
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKL----FDTIKPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
++ P Y + CK G F + L+++ G P ++T+ V+ S LGK
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS---LGK 355
Query: 370 YEEAHEY--VVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
++ E V + +A YS L + K G A +I +M ++G++ + V
Sbjct: 356 SKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV 415
Query: 427 FN 428
+N
Sbjct: 416 YN 417
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRS-GFDPDMTTYNLLVSCLCKNGKFAEACQV----LET 309
+MR + K G Y +A EM++S G D N L+ L K A +V +T
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT 268
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
++ P +NILI CK +FD AR +D + + P ++T+ + +++Y + G
Sbjct: 269 IK-----PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 370 YEEAHE 375
+ +E
Sbjct: 324 FRRVNE 329
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 33/335 (9%)
Query: 98 NDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPELCCDPQIXXXXXXX 157
+D+E +L+ +V L+ ++ +I L E +A +FF W G +P
Sbjct: 110 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTW-AGHQEHYSHEP--------- 159
Query: 158 XXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLC 217
Y M+ IL+ ++ R L + + + V ++DVL E+
Sbjct: 160 ----IAYNEMIDILSSTKYKNKQF-RIVIDMLDYMKRNNKTVV-----LVDVLLEI---- 205
Query: 218 QSSGIRLLIEMF-TFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMK 276
+R E + T F + + K + ++N +N+L+ A+CK G + L++ M
Sbjct: 206 ----LRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM- 260
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
R PD T+N+L C+ +A ++LE + + P+ F Y I C+ G D
Sbjct: 261 RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 337 LARKFLDKITLKG---IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYS 393
A D + KG P T A +I + + K EE E + S + Y
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 394 LLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + A K L EM +KG P+ +N
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYN 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +++ A+ K E L+ M +G PD++TY ++ +C K EA + L+ +
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN + +LC++ + D A K ++ P + T+ +I +FE+ +
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A + Y + A +L E+++KGLK + VF+
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFD 520
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 244 KDRR---KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF 300
KDR V Y+ L+ +CK G A + EM +P++ T++ L+ K GK
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 301 AEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
++ V + + + P F Y+ LI LC H + D A K LD + KG P ++T++ +
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 361 IKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
+F+ + ++ + + + ++ + + L + + G + LA + M GL
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 421 KPNFSVFNKVRKCLEKKNEI 440
PN +N V L E+
Sbjct: 255 IPNIRSYNIVLAGLFANGEV 274
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 274 EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYN-ILISLLCKH 332
+M + G +PD+ T + LV+ C + +A V +EK G+ ++ + ILI LCK+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK-MGIKRDVVVDTILIDTLCKN 61
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
A + L ++ +GI P ++T++++I + G+ +A + SK+ + +
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
S L + K+G + + M+ + PN
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 152
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 193 NLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVN-- 250
N D+ + +E V + EV G+ + I L ++ + + +++ +I + R V+
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN ++ K+G+ + A +EM +G P++ TY L++ LCKN + +A ++ + +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 311 EKDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K+ G+ + Y LI CK + A ++ +G+ P + ++I + LG
Sbjct: 646 -KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNK 429
A + Y+ L LK GN++LA ++ EM GL P+ ++
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 430 VRKCLEKKNE 439
+ L KK +
Sbjct: 765 IVNGLSKKGQ 774
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ A K+G+ + A L EM G ++ L++ CKN A + + +E
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K+ P +++LI K+G+ + A +F K+ + G+ P + +I+ + + K+E
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 372 EA-----HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
EA + G A+ + N S L K+G A ++L +M +G+ PN
Sbjct: 427 EALKLFDESFETGLAN--VFVCNTILSWLC----KQGKTDEATELLSKMESRGIGPNVVS 480
Query: 427 FNKV 430
+N V
Sbjct: 481 YNNV 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ CK+ + E A L E+ G +P YN L+S G A + + +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 312 KDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
KD GL + Y LI L K G LA + ++ G+ P + + ++ + G++
Sbjct: 717 KD-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 371 EEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + + K + + N Y+ + H ++GN+ A ++ EM+DKG+ P+ + F+
Sbjct: 776 VKVVK-MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM +CK ++A + EMK G D+ Y L+ CK A + +
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P + YN LIS G A K+ G+ + T+ +I + G
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A E + Y+++ KKG + K+ EM + PN ++N V
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N ++ +CK+G + A L+ +M+ G P++ +YN ++ C+ A V + +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P + Y+ILI ++ A + ++ +T IE + + +I ++G+ +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 373 AHEYVVGSASKQSY-SSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A E + ++ S +Y+ + K+G M A EM G+ PN + +
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 432 KCLEKKNEI 440
L K N +
Sbjct: 627 NGLCKNNRM 635
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
H + +++ K +E A L E +G ++ N ++S LCK GK EA ++L +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
E P +YN ++ C+ DLAR I KG++P T++ +I F
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
+ A E V S + Y + K G A+++L M+++
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 13/219 (5%)
Query: 219 SSGIRLLIEMFTFTGSFDIVEYVIGKD-RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKR 277
SS I L +T +F++ ++ K+ + + Y +L++ + K G E A L+ M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 278 SGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDL 337
G PD YN ++ LC G E + + + P + ILI +C++G
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVVGSAS----KQSYSSN 389
A + +I G P + T A+I + G+ +EA H+ VG + + S+S N
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 390 ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ + ++ G++L A + L D G P+ +N
Sbjct: 487 RSFDTM----VESGSILKAYRDLAHFADTGSSPDIVSYN 521
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +++A+C +G E L EM + PD T+ +L+ +C+NG EA ++ +E
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI--LTHAA--VIKSYFEL 367
K P +N LI LCK G+ AR L K+ + L+H+ + E
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
G +A+ + A S +Y++L + G++ A K+L + KGL P+ +
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 428 NKV 430
N +
Sbjct: 556 NTL 558
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 16/232 (6%)
Query: 213 VGGLCQSSGI----RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+ GLCQ +L EM T D V + N L+ CK G A
Sbjct: 240 ISGLCQRGSADDARKLFYEMQTSGNYPDSVAH------------NALLDGFCKLGRMVEA 287
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
L++ ++ GF + Y+ L+ L + ++ +A ++ + K + P Y ILI
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
L K G+ + A K L + KGI P + AVIK+ G EE + + +S+
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 389 NANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
+++L + G + A++I E+ G P+ + FN + L K E+
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +LM + KKG A + +M G P+ TY +L+S LC+ G +A ++ ++
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N L+ CK G+ A + L G + ++++I F +Y
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A E K Y++L K G + A K+L M KG+ P+ +N V
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 432 KCL 434
K L
Sbjct: 381 KAL 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +L+ ++C+ G A + E+++SG P + T+N L+ LCK+G+ EA +L +E
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 312 --------------------------------------KDHGL-PKEFNYNILISLLCKH 332
D G P +YN+LI+ C+
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G D A K L+ + LKG+ P +T+ +I +G+ EEA + A S A Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY--AKDDFRHSPAVY 588
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEK 436
L T +K +L+A + + + K + N++ +C ++
Sbjct: 589 RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE 632
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDM 284
++E F F+ +V+G + Y+ L+ + + Y +A L M + PD+
Sbjct: 284 MVEAFELLRLFEKDGFVLG-----LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 285 TTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDK 344
Y +L+ L K GK +A ++L ++ P + YN +I LC G + R +
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 345 ITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGN 404
++ P TH +I S G EA E S A ++ L K G
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 405 MLLAQKILYEM 415
+ A+ +L++M
Sbjct: 459 LKEARLLLHKM 469
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ A ++ + E+ + ++M++ GF D TYN ++ K G+ A Q+ + ++
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
G P Y +LI L K + A + ++ GI+P + T++A+I Y + GK
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EEA + + N YS++ + L+ A + +M+ G P+++++ +
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 431 RKCLEKKN 438
L K+N
Sbjct: 550 ILGLMKEN 557
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 203 VRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKK 262
R + +L +G Q S L +E+FT E +G DR +V YN +M +
Sbjct: 191 ARMVAAILGVLGRWNQES---LAVEIFTR------AEPTVG-DRVQV--YNAMMGVYSRS 238
Query: 263 GDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE--ACQVLETVEKDHGLPKEF 320
G + +A LV M++ G PD+ ++N L++ K+G A ++L+ V P
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
YN L+S + D A K + + +P + T+ A+I Y G EA +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 381 ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K + Y+ L ++ N +++ +M G + +N +
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV- 310
YN L+ C+ E L+++M+ G DP + TY L+S K +A Q+ E +
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K L + F Y+ ++ + G A K L + GIEP + T ++ SY G
Sbjct: 1025 SKGLKLDRSF-YHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+EA + + + + YS + +L+ + + L EM +GL+P+ ++
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWT 1141
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 206 IMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVC 260
+++ L ++G S I L+++ F G+ V+ + + + Y +++ +C
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
K A +V EM+ + F ++ +N ++ + + QV + +++ P E
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
YN LI + C+ + + + ++ G++P + T+ ++I ++ + E+A +
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 381 ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
SK + Y + + G+ A+K+L M + G++P + +
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYER--AGFLVKEMKR 277
++ +++ +G F + ++ R++ + +N L+ A K G A L+ ++
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 278 SGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDL 337
SG PD TYN L+S ++ A +V E +E P + YN +IS+ + G
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-NYSLLA 396
A + ++ LKG P +T+ +++ ++ E+ E V K + + Y+ +
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE-VYQQMQKMGFGKDEMTYNTII 409
Query: 397 TLHLKKGNMLLAQKILYEMMD-KGLKPNFSVFNKVRKCLEKKN 438
++ K+G + LA ++ +M G P+ + + L K N
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDM 284
L E+F G D+ Y YN +M + KKG ++ A ++ +M + D+
Sbjct: 616 LFEIFNGMGVTDLTSYT----------YNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 285 TTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDK 344
TYN+++ L K G+ A VL+ + K G YN LI+ L K + D A + D
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 345 ITLKGIEPCILTHAAVIKSYFELGKYEEAHEYV 377
+ GI P ++++ +I+ + GK +EA++Y+
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ +C G + A + E+K SG +PD +TY +L+ CK+ + +A ++ ++
Sbjct: 292 YNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P YN L+ K + A + +K+ +G+ T+ +I F G+ E
Sbjct: 352 YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAE 411
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
K + +S++ ++G + A K++ EM +G
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 237 IVEYVIGKDRRKVN--HYNVLMRAVCKKGDYERAGFLVKEMKR------SGFDPDMTTYN 288
+ E + G R K + YN+ + GD + A L KEMK S F PD+ TYN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 289 LLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK 348
L+ LC GK +A V + ++ P Y ILI CK + D A + ++
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Query: 349 GIEPCILTHAAVIKSYFELGKYEEA 373
G P + + ++ + K EA
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEA 378
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 206 IMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDY 265
I+D L E G L ++ G+ + + + + + YN L++ CK GD
Sbjct: 326 IIDGLGEAGRLSEALGM--------------MERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 266 ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV-LETVEKDHGLPKEFNYNI 324
A ++K M G DP TTYN K+ K E + + +E H P Y++
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS-PDRLTYHL 430
Query: 325 LISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ 384
++ +LC+ G+ LA + ++ +GI+P +LT +I L EEA E
Sbjct: 431 ILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEF------- 483
Query: 385 SYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
NA +++G ++ Q I ++M+D GL+
Sbjct: 484 ---DNA---------VRRG--IIPQYITFKMIDNGLR 506
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ C+ + A +++EMK + + + +N ++ L + G+ +EA ++E
Sbjct: 288 YGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN L+ CK G A K L + +G++P T+ K + + K E
Sbjct: 348 VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTE 407
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
E Y L+ + + G + LA ++ EM ++G+ P+
Sbjct: 408 EGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDL 460
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 235 FDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL 294
F ++E DR Y+++++ +C+ G A + KEMK G DPD+ T +L+ L
Sbjct: 414 FKLIEAGHSPDRLT---YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKF 341
C+ EA + + + +P+ + ++ + L G D+A++
Sbjct: 471 CRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 25/256 (9%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV 249
+V NL +A + K++D + G + LI S+ Y+ + +
Sbjct: 365 MVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIH------SYGRANYL----KEAM 414
Query: 250 NHYNVLMRAVCKKGD---------YERAGFL------VKEMKRSGFDPDMTTYNLLVSCL 294
N +N + A C+ + +AGFL + M+ +G PD TY+++++CL
Sbjct: 415 NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
K G A ++ + P +NI+I+L K ++ A K + G +P
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+T++ V++ G EEA K Y LL L K GN+ A +
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Query: 415 MMDKGLKPNFSVFNKV 430
M+ GL+PN N +
Sbjct: 595 MLQAGLRPNVPTCNSL 610
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+++ K +YE A L ++M+ +GF PD TY++++ L G EA V ++
Sbjct: 502 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 561
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + +P E Y +L+ L K G D A ++ + G+ P + T +++ ++ + +
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Query: 372 EAHEYVVGSASKQSYSSNANYSLL 395
EA+ + + + S Y+LL
Sbjct: 622 EAYNLLQSMLALGLHPSLQTYTLL 645
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%)
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L+ EM R G P+ TYN L+ + EA V +++ P Y LI +
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 331 KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA 390
K G D+A ++ G+ P T++ +I + G AH + +
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 391 NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
++++ LH K N A K+ +M + G +P+ ++ V + L
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%)
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
GF ++ GF D TY +V L + +F E ++L+ + +D P YN LI
Sbjct: 344 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS 403
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
+ A +++ G EP +T+ +I + + G + A +
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 389 NANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
YS++ K G++ A ++ EM+ +G PN FN
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVL-ETVEKDHGLPKEFNYNILISLLCKHGQFDLARK 340
P+ YN+ ++ LCK GK +A ++ + + D +P E+ Y ILI G + A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
D++ LKGI P I+T+ A+IK +LG + A + K + Y+ L +
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 401 KKGNMLLAQKILYEMMDKGL 420
K GN+ A ++ +M++KGL
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN+L++ + G + L K M + G + D + + L+ L K G F EA ++ E
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
V L N++IS LCK + + A++ LD + + +P + T+ A+ Y+++G
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+EA K + + Y+ L + K ++ ++ E+ +GL P + +
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 8/248 (3%)
Query: 200 VECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYV--IGKDRRKV---NHYNV 254
VE + +++ +++E G LI+ + G + E+V + K+++ V + Y V
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
LM C+ G A + M G + T N L++ CK+G+ EA Q+ +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P YN L+ C+ G D A K D++ K + P ++T+ ++K Y +G + +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ + + S L K G+ A K+ ++ +GL + N + L
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 435 ---EKKNE 439
EK NE
Sbjct: 517 CKMEKVNE 524
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSG-FDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YNV + +CK G E A L ++ S F PD TY +L+ G +A + + +
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+P YN LI LCK G D A++ L K+ KGI P +T+ +I + G
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 371 EEA 373
EA
Sbjct: 842 AEA 844
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 224 LLIEMFTFTGSF-DIVEYVIGKDRRKVNHYNV----LMRAVCKKGDYERAGFLVKEMKRS 278
+L++ ++ G+F D++ +R VN + L+ A+ K GD+ A L + +
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G D T N+++S LCK K EA ++L+ V P Y L K G A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+ + KGI P I + +I F+ + + V+ ++ + A Y L T
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
G + A +EM++KG+ N ++ +K+ L + ++I
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKI 662
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +L+ GD +A L EM G P++ TYN L+ LCK G A ++L +
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
+ P YN LI L K G A + +K+ KG+
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ GD E +++ M G ++ TY L+ CK G EA V E ++
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + + Y +L+ C+ GQ A + D + G+ ++I Y + G+
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA + + Y+ L + + G + A K+ +M K + P +N
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF--AEACQV 306
+ +NVL++A CKK E A +VK+M+ G PD TYN + +C + G+ AE+ V
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ V K+ P I++ C+ G+ +F+ ++ +E ++ ++I + E
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN--- 423
+ + E + + YS + G M A ++ EM+ G+KP+
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 424 FSVFNK--VRKCLEKKNE 439
+S+ K VR KK E
Sbjct: 368 YSILAKGYVRAKEPKKAE 385
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ +M A G E+A + KEM ++G PD Y++L + + +A ++LET+
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL---G 368
+ P + +IS C +G D A + +K+ G+ P I T ++ Y E+
Sbjct: 393 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLA 396
K EE + + G K N+ + LLA
Sbjct: 452 KAEEVLQMMRGCGVK---PENSTFLLLA 476
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N ++ A + G+ E A + +MK G +P +TYN L+ GK + ++L+ +
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 312 KDHGL---PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ + P +N+L+ CK + + A + + K+ G+ P +T+ + Y + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 369 KYEEAHEYVVGS-ASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
+ A VV K+ N ++ + ++G + + + M + ++ N V
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 427 FN 428
FN
Sbjct: 298 FN 299
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 224 LLIEMFTFTGSFDIVEYVIGKDRRKVNH-----YNVLMRAVCKKGDYERAGFLVKEMKRS 278
++I G D V+Y++ + + + H + ++ + G ERA + +K
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G DP + YN ++ L + V +++D P F YN+L+ LCK+ + D A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
+K L +++ KG P +++ VI S E+G +E E S NA + L
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV-YNALINGLCKE 259
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
H KG A +++ EM++KG+ PN ++ + L +I
Sbjct: 260 HDYKG----AFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 45/242 (18%)
Query: 240 YVIGKDRRK------VNHYNVLMRAVCKKGDYERAGFLVKEMKRSG-------------- 279
Y++ +D ++ V YNVL++A+CK + A L+ EM G
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 280 ----------------FDPDMTTYNLLVSCLCKNGKFAEACQVL-ETVEKDHGLPKEFNY 322
F+P ++ YN L++ LCK + A +++ E VEK P +Y
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS-PNVISY 284
Query: 323 NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA----HEYVV 378
+ LI++LC GQ +LA FL ++ +G P I T ++++K F G +A ++ +
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 379 GSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKN 438
G + + + Y+ L GN++ A + M + G PN + + K+
Sbjct: 345 GFGLQPNVVA---YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 439 EI 440
+
Sbjct: 402 SL 403
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ Y L+ K+G + A ++ +M SG P++ Y +V LC++ KF EA ++E
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK-GIEPCILTHAAVIKSYFEL 367
+ K++ P +N I LC G+ D A K ++ + P I+T+ ++ +
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ EEA+ + S++ Y+ L G +A +++ +MM G P+
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 428 NKV 430
N +
Sbjct: 567 NMI 569
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ YN L+ +CK+ DY+ A L++EM G P++ +Y+ L++ LC +G+ A L
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 309 TVEKDHGLPKEFNYNILI-SLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ K P + + L+ + FD + I G++P ++ + +++ +
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 368 GKYEEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G +A V + S N Y L K+G++ A I +M+ G PN V
Sbjct: 366 GNIVKAVS-VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 427 FNKVRKCL 434
+ + + L
Sbjct: 425 YTNMVEAL 432
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L++ C G+ +A + M+ G P++ TY L++ K G A + +
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P Y ++ LC+H +F A ++ ++ + P + T A IK + G+ +
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 372 EAHE 375
A +
Sbjct: 475 WAEK 478
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C G A LV +M G PD T N+++ CK GK A Q+L+ V
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 312 --KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ P +Y +I LC+ + L+++ GI P I T + +I + L
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI-LDD 649
Query: 370 YEEAHE 375
AH+
Sbjct: 650 IVRAHD 655
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 146/376 (38%), Gaps = 25/376 (6%)
Query: 78 RPYASAKQVSEIVALIREG---------VNDLEFSLNRVNVSLSMALIVEIFHILASERV 128
+PY +A V++IV +++ ++ L+F N V+++ S+ ++ E+
Sbjct: 135 KPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEV--------D 186
Query: 129 SALQFFHWLKGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGF 188
+AL F W K P + + + + E G +F
Sbjct: 187 AALSLFRWAK-KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA 245
Query: 189 L--LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTG----SFDIVEYVI 242
++ L KA +E E G + L+ +F G +F+I E +
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 243 GKDRR-KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFA 301
D + Y +++ ++ K G + A L ++MK P + ++ LV + K G+
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 302 EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
+ +V ++ P + LI K G+ D A + D++ G P + +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 362 KSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
+S+ + GK E A + + YS L +H G + A KI M + GL+
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 422 PNFSVFNKVRKCLEKK 437
P S + + L K
Sbjct: 486 PGLSSYISLLTLLANK 501
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R + L+ + K G + A L EMK+SGF P+ Y +++ K+GK A
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
V + +EK LP Y+ L+ + GQ D A K + +T G+ P + ++ +++ +
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL-TLL 498
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ + ++ YS + S + +++K ++ LA K L M G+K N
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTN 556
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%)
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
+ F+PD+ Y LV C+ G+ +EA +V + ++ P + Y+I+I LC+ GQ
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A + G P +T +++ + + G+ E+ + Y+ L
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEIG 441
H + N+ A K+L M+ K + N S FN + + +EKK ++
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 87/177 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+R C+ G+ A + KEMK +G +P++ TY++++ LC+ G+ + A V +
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N L+ + K G+ + + +++ G EP +T+ +I+++ E
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A + + K+ + + ++ + KK ++ A ++ +MM+ +PN +N
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYN 434
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 227 EMFTFTG---SFDIVEYVIG--KDRR---KVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
EM +G FD+ ++I K R + + +L+R + G A M+
Sbjct: 156 EMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDY 215
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G PD +++++S L + + +EA +++ KD P Y L+ C+ G+ A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
K ++ L GIEP + T++ VI + G+ AH+ + ++ L +
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
H+K G ++ +M G +P+ +N
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++++ A+C+ G RA + +M SG P+ T+N L+ K G+ + QV ++
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 352
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P YN LI C+ + A K L+ + K E T + + +
Sbjct: 353 KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
AH + + Y++L + + + + K+ EM DK ++PN + +
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTY 468
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 34/351 (9%)
Query: 84 KQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPE 143
+++ +++L+R LEF LN +NV L + +V +F + ++F W + E
Sbjct: 128 EKLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLKWAT-QNEE 186
Query: 144 LCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFL-LVLNLDKASTVEC 202
+ + +V I + + RR+ +A+G LV + + + C
Sbjct: 187 ITVTTSLVESL------------LVAIAS--DTRRM----DAYGLWDLVKEIGEKES--C 226
Query: 203 VRKIMDVLNEVGGLCQSSG-IRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCK 261
+++LNE+ L G + ++F+ T F Y + + A+CK
Sbjct: 227 GVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTP--------NAKTYYLTLEALCK 278
Query: 262 KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE-KDHGLPKEF 320
+ + A + ++M +SG + +++ CK GK EA V E + K+ LP F
Sbjct: 279 RSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF 338
Query: 321 NYNILISLLCKH-GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVG 379
LI+ LCK+ G A++ L ++ + I + VI S + ++A ++
Sbjct: 339 -VATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLD 397
Query: 380 SASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
SK NA ++L+ K G++ A+++L M +GLKP+ + +
Sbjct: 398 MISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+++ A K GD + A ++K M+ G PD+ TY +++S K G EA ++L +
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
K H Y+ LI CK ++D A K L+++ G++P + +I+S+
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 12/230 (5%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRK-VNHYNVLMRAVCKKGDYERAGFL 271
+ LC++ G T T + +++ + G+ RR+ + ++ ++ ++C+ + + A L
Sbjct: 343 ITALCKNDG--------TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKAL 394
Query: 272 VKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCK 331
+ +M G P +NL+V K G EA +VL+ +E P + Y ++IS K
Sbjct: 395 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK 454
Query: 332 HGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN 391
G D A++ L + K + +T+ A+I+ Y ++ +Y+EA + ++ + NA+
Sbjct: 455 GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALK-LLNEMDRFGVQPNAD 513
Query: 392 Y--SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
L+ + LK + A+ + EM KGL N +R E ++E
Sbjct: 514 EYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESE 563
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N L+R +C++ A + +K F PD+ T+N+L+S K +E +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLS----GWKSSEEAEAFFEEM 237
Query: 312 KDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K GL P YN LI + CK + + A K +DK+ + P ++T+ VI +G+
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
++A E + Y A Y+ + A K++ EM+ KGL PN + +N
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 431 RKCLEKKNEIG 441
+ L N++G
Sbjct: 358 FRVLSLANDLG 368
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V YN +R C A LV EM + G P+ TTYNL L + ++
Sbjct: 316 VAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYV 375
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + LP + LI + +H + D+A + + + +KG L ++ +L
Sbjct: 376 RMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLA 435
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATL 398
K EEA + ++ K SN ++ + L
Sbjct: 436 KVEEAEKCLLEMVEKGHRPSNVSFKRIKLL 465
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +++A+C+KG + + +E++++GF+PD+ ++N L+ + F E ++ + ++
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +YN + L ++ +F A +D + +GI P + T+ A+I +Y E
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL--KPNF 424
E + K Y +L L KKG++ A ++ E + L +PN
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEM-KRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V +N L+ A + A KE+ ++ G PD+ TYN ++ LC+ G +
Sbjct: 155 RTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILS 214
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ E +EK+ P ++N L+ + F + D + K + P I ++ + ++
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
K+ +A + ++ Y+ L T + N+ K EM +KGL P+
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ YN +R + + + A L+ MK G PD+ TYN L++ + E +
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE-- 366
+++ P Y +LI LLCK G D A +++ + I+ +L+ + K E
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV----EVSEEAIKHKLLSRPNMYKPVVERL 378
Query: 367 --LGKYEEAHEYVVGSASKQSY 386
GK +EA + +V + QSY
Sbjct: 379 MGAGKIDEATQ-LVKNGKLQSY 399
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 213 VGGLCQSSGIR---LLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAG 269
+G LC+ IR +L+E + +GS V YN ++R + G+ E+A
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGS-----------PPDVITYNTVIRCMFDYGNAEQAI 229
Query: 270 FLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLL 329
K+ ++G P M TY +LV +C+ A A +VLE + + P YN L++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 330 CKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN 389
C+ G + + I G+E +T+ ++ S ++E E ++ + SY
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE-ILNIMYQTSYCPT 348
Query: 390 A-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
Y++L K + A Y+M+++ P+ +N V + K+ +
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N ++ +C G A LV+ M R P + + LV L + + +A +L +
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
G+P YN++I LCK G A L+ ++L G P ++T+ VI+ F+ G E+
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A + Y++L L + A ++L +M +G P+ +N +
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+R + + ++A +++ M SG PD TYN+++ LCK G A +LE +
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P YN +I + +G + A +F G P ++T+ +++ A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
E + A + Y Y+ L + ++GN+ ++ ++ GL+ N +N +
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ +CK RA +M PD+ TYN ++ + K G +A ++L ++
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P YN +I L K G A + ++ GI P +T ++I + E
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + + ++++ + + Y L+ KK + +A +++ M+ G KP+ +++ +
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Query: 432 KCLEK 436
K +E+
Sbjct: 532 KGVEE 536
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 65/126 (51%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ +CKKG A L+++M SG PD+ TYN ++ C+ G +A + +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ P Y +L+ L+C++ A + L+ + ++G P I+T+ +++ G E
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 372 EAHEYV 377
E +
Sbjct: 297 EVASVI 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ C++G+ E +++ + G + + TYN L+ LC + + E ++L +
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YNILI+ LCK A F ++ + P I+T+ V+ + + G +
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+A E + + Y+ + KKG M A ++ ++M+D G+ P+
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y VL+ VC+ RA ++++M G PD+ TYN LV+ C+ G E V++ +
Sbjct: 247 YTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI- 305
Query: 312 KDHGLP-KEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
HGL YN L+ LC H +D + L+ + P ++T+ +I +
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A ++ ++ Y+ + K+G + A ++L + + P +N V
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 431 RKCLEKK 437
L KK
Sbjct: 426 IDGLAKK 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL-ETV 310
YN ++ + KKG ++A L +M +G PD T L+ C+ EA QVL ET
Sbjct: 422 YNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETS 481
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ +G+ + Y ++I LCK + ++A + ++ + G +P + A++K E+G
Sbjct: 482 NRGNGI-RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMG 540
Query: 371 EEA 373
EA
Sbjct: 541 SEA 543
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V Y+ ++ ++ K+G A +M SG PD Y ++++ +NG+ EA +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
++E V K P F Y +LIS K G + ++LDK+ G+ P ++ + A+I +
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFL 698
Query: 366 ELGKYE 371
+ G ++
Sbjct: 699 KKGDFK 704
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +++ + ++ E LV ++ F PD+ TY ++V+ LCK A +++ +E
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y+ +I L K G+ A + K+ GI+P + + +I +Y G+ +
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA+E V S+ Y++L + +K G M + L +M++ GL PN ++ +
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ Y +++ +CKK D + A ++ M+ G P + Y+ ++ L K G+ EA +
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + P E Y I+I+ ++G+ D A + ++++ + P T+ +I + ++G
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGN 404
E+ +Y+ + Y+ L LKKG+
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV-L 307
VN Y L CK+G A L M+ G+ D Y L+ CK+ A ++ L
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
VE+ L +N LI K G D R ++ KG++ + T+ +I SY +
Sbjct: 297 RMVERSFELDPCI-FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 368 GKYEEAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G + A V + + S N + Y+ L KKG M A +L M+D G+ P+
Sbjct: 356 GNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHIT 415
Query: 427 FNKVRKCLEKKNEI 440
+ + K L K +E+
Sbjct: 416 YFVLLKMLPKCHEL 429
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 238 VEYVIGKDRRKVNHYN-----VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVS 292
VE ++G+ RK + V+ A+C + +Y A +++M G P +YN ++
Sbjct: 461 VESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK 520
Query: 293 CLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
CL + + ++ +++ +P Y I+++ LCK D A +D + G+ P
Sbjct: 521 CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 353 CILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKIL 412
+ ++++I S + G+ EA E Y ++ + + G + A +++
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 413 YEMMDKGLKPN 423
E++ L+P+
Sbjct: 641 EEVVKHFLRPS 651
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 292 SCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIE 351
S L G + A +V+ V+K +P + +N +I+ C G+ D A L+ + +GI
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSI-IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIV 826
Query: 352 PCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKI 411
P ++T+ ++KS+ E G E A + G+ + YS L L A +
Sbjct: 827 PNLVTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALAL 883
Query: 412 LYEMMDKGLKPNFSVFNKVRKCL 434
+ EM G+ PN + K+ +CL
Sbjct: 884 MLEMQKSGINPNKDSYEKLLQCL 906
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 224 LLIEMFTFTGSFDIVEYVIG-----KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
+LI + G+F+ E V+ V Y LM + + G A + + M+ S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETV--EKDHGL-PKEFNYNILISLLCKHGQF 335
G +P TY +++ + KF EA +V ET+ EK L P + Y+++I + K G +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIK---SYFELGK-YEEAHEYVVGSASKQSYSSNAN 391
+ ARK + KG+ +T+ +++ SY E+ K Y++ + +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI-------QPDVVS 316
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
Y+LL + + A + EM+D G++P +N
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 189 LLVLNLDKASTVECVRKIMDVLNEVG-GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR 247
+++ KA E RK+ + VG G+ QS+ + +F S+ V + + +R
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSM--VGKGVPQSTVT--YNSLMSFETSYKEVSKIYDQMQR 307
Query: 248 K-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
V Y +L++A + E A + +EM +G P YN+L+ +G +
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A V +++ +D P ++Y ++S + A KF +I + G EP I+T+ +IK
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 363 SYFELGKYEEAHE 375
Y + E+ E
Sbjct: 428 GYAKANDVEKMME 440
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH--YNVLMRAVCKKGDYERAGF 270
V GLC + + L EM V I R K++ YN L+ CK G E+A
Sbjct: 191 VVGLCHARKVDLAYEM---------VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
L M + G +PD+ TYN+L++ N A V+ + + ++YN L+ C
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC 301
Query: 331 KHGQFDLARKFLDKITLKGIEP---C-ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSY 386
+ D F+ +K +EP C +++++ +I+++ +A+ K
Sbjct: 302 RVSHPDKCYNFM----VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Query: 387 SSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ Y+ L L++GN +A+K+L +M + GL P+
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+ L+ C+ + +A L +EM++ G ++ TY L+ + G + A ++L+
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+ + P Y ++ LCK G D A + + I P +++ ++I G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ EA + K+ + + ++ + A K+ +MMDKG + V +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 429 KVRK 432
+ K
Sbjct: 505 TLIK 508
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN + + ++ +E A + +MK GF TY+ +S LCK KF +L +E
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P + +N+ + LLC+ + A + + +G EP ++++ +I F GK
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 372 EAHE 375
+A E
Sbjct: 167 DAVE 170
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ + +CK ++ L+ +M+ GF PD+ +N+ + LC+ K A Q +
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +Y ILI+ L + G+ A + + + G+ P AA++ K +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 372 EAHEYVVGS-ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A+E V S + S Y+ L + K G + A+ + M G +P+ +N
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 252 YNVLMRAVCKKGDYERA-GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN L++ C+ ++ F+VKEM+ GF D+ +Y+ L+ C+ +A ++ E +
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ + Y LI + G +A+K LD++T G+ P + + ++ + G
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
++A+ + +Y+ L + + G + A K+ +M K P+
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++++ A K+GD A + EM + GF + Y + V C+ G EA ++L +E
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P + +N LI + G + ++ + + +G+ P ++KS ++
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
A+E + S K YS L ++ ++ A K+ YEM + + P F VF
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVF 482
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 265 YERAGFLV-KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYN 323
Y GF V K + GF + T N L+ K+ ++ E P E
Sbjct: 179 YLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIR 238
Query: 324 ILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASK 383
I+I +LCK G+ LD+I K P ++ + +++ E + EE+ + K
Sbjct: 239 IMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 384 QSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN---FSVFNKVRKCLEKKN 438
YS++ K+G+++ A+K+ EM+ +G N ++VF VR C EK +
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF--VRVCCEKGD 354
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 224 LLIEMFTFTGSFDIVEYVIG-----KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS 278
+LI + G+F+ E V+ V Y LM + + G A + + M+ S
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETV--EKDHGL-PKEFNYNILISLLCKHGQF 335
G +P TY +++ + KF EA +V ET+ EK L P + Y+++I + K G +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIK---SYFELGK-YEEAHEYVVGSASKQSYSSNAN 391
+ ARK + KG+ +T+ +++ SY E+ K Y++ + +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI-------QPDVVS 323
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
Y+LL + + A + EM+D G++P +N
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 189 LLVLNLDKASTVECVRKIMDVLNEVG-GLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRR 247
+++ KA E RK+ + VG G+ QS+ + +F S+ V + + +R
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSM--VGKGVPQSTVT--YNSLMSFETSYKEVSKIYDQMQR 314
Query: 248 K-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
V Y +L++A + E A + +EM +G P YN+L+ +G +
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A V +++ +D P ++Y ++S + A KF +I + G EP I+T+ +IK
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 363 SYFELGKYEEAHE 375
Y + E+ E
Sbjct: 435 GYAKANDVEKMME 447
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 106/261 (40%), Gaps = 72/261 (27%)
Query: 242 IGKDRRK--VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYN----------- 288
+GK+R K V +N+L+ C+ ++ A L +EMK G +P++ ++N
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 289 ------------------------LLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNI 324
+LV LC+ G+ +AC ++ + LP EF+Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 325 LISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEY-------- 376
L+ LC + A + ++++ KG PC + +++ + G+ E+A +
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 377 ----------VVGSASKQSYSSNAN-----------------YSLLATLHLKKGNMLLAQ 409
++ +S++AN Y +L + K+G +
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 410 KILYEMMDKGLKPNFSVFNKV 430
++ EM+DK + P+ +N++
Sbjct: 459 VLVNEMLDKDMLPDIFTYNRL 479
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 258 AVCKKGDYERAGFLVKEMKR-SGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL 316
A C+ + A MKR P++ YN +V+ K+G +A + + + K+
Sbjct: 166 AYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK 225
Query: 317 PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEY 376
P +NILI+ C+ +FDLA ++ KG EP +++ +I+ + GK EE +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
Query: 377 VVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
S A +L ++G + A ++ ++++K + P+
Sbjct: 286 AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 234 SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+FD ++ +I + V YN ++ K GD ++A + M + PD+ T+N+L++
Sbjct: 179 AFDTMKRLI-DGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 237
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
C++ KF A + +++ P ++N LI G+ + K ++ G
Sbjct: 238 YCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFS 297
Query: 354 ILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY 413
T ++ G+ ++A V+ +K+ S +Y L + + A +++
Sbjct: 298 EATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMME 357
Query: 414 EMMDKGLKPNF 424
E+ KG P F
Sbjct: 358 ELWKKGQTPCF 368
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
+ HY+ L+ + KGDY++A L+ EMK G P+ L+ K G F + ++L
Sbjct: 272 IYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLS 331
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+E E Y +L+ L K G+ + AR D + KG+ ++ +I +
Sbjct: 332 ELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSK 391
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATL---HLKKGNMLLAQKILYEMMDKGLKPNFS 425
+++EA E S ++ + +L T+ + + G M +++ +M ++ + P+++
Sbjct: 392 RFKEAKEL---SRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYN 448
Query: 426 VFN 428
F+
Sbjct: 449 TFH 451
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 242 IGKDRRKVNHY--NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYN-LLVSCL-CKN 297
I + K+N Y N ++ + K G + L +MKR G PD+ TYN LL C+ KN
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 298 GKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTH 357
G + +A +++ + + Y ++++ +G+ + A F+ ++ ++G P I +
Sbjct: 217 G-YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 358 AAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMD 417
++++ SY G Y++A E + S + + L +++K G ++++L E+
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 418 KGLKPN 423
G N
Sbjct: 336 AGYAEN 341
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 252 YNVLMRAVCK-KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN L+ K K Y +A L+ E+ +G D Y +++ NG+ EA ++ +
Sbjct: 204 YNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQM 263
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+ + P ++Y+ L++ G + A + + ++ G+ P + ++K Y + G +
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ + E + S + Y +L K G + A+ I +M KG++ +
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 234 SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+FD++ V+ +Y +++ C D ++ L K+MKR PD+ TY +L+
Sbjct: 691 AFDVIPDVV--------YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-- 740
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPC 353
KN + ++ + P F Y +LI CK G A++ D++ G++P
Sbjct: 741 --KNKPERNLSREMKAFDVK---PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 354 ILTHAAVIKSYFELGKYEEAH---EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQK 410
+ A+I ++G +EA + ++ S K Y+ L + G +L A K
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV---VPYTALIAGCCRNGFVLKAVK 852
Query: 411 ILYEMMDKGLKPNFSVFNKV 430
++ EM++KG+KP + + V
Sbjct: 853 LVKEMLEKGIKPTKASLSAV 872
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 193 NLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNH- 251
N++ V+ K++ + + SS ++ +M F+ ++D+ K+ R+ N
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF-----KEFRETNIS 393
Query: 252 -----YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
YNV A+ K G E A L +EM G PD+ Y L+ C GK ++A +
Sbjct: 394 LDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL 453
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ ++ P YN+L L +G A + L + +G++P +TH VI+ +
Sbjct: 454 MIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLID 513
Query: 367 LGKYEEAHEYVVGSASKQSYSSNAN------------------------------YSLLA 396
G+ ++A + S +S ++A+ ++L
Sbjct: 514 AGELDKAEAF-YESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFT 572
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+L +K + AQ +L M G++P S++ K+
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLV-------------------- 291
Y ++R +C + E A +V +M++ G DPD+ Y+ ++
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 292 ---------------SCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
C C+ G F+EA + + + + YN+ L K G+ +
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLA 396
A + ++T KGI P ++ + +I GK +A + ++ Y++LA
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
G A + L M ++G+KP + N V + L E+
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 252 YNVLMRAVCKKGDY-ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y L ++C + DY +A L+ M + G +P+ + Y L+ C+ +A + E +
Sbjct: 567 YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
+P F Y I+I+ C+ + A + + + ++P ++T++ ++ S EL
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMK 686
Query: 371 EEAHEYVV 378
E + V
Sbjct: 687 REMEAFDV 694
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L++ + + GD + A + KEM G PD+ TYN+L+ LCKNGK +A V VE
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKAL-VAGKVE 77
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+++ SL +LKG++P ++T+ +I + + G E
Sbjct: 78 D--------GWDLFCSL-----------------SLKGVKPNVVTYTTMISGFCKKGFKE 112
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
EA+ + Y+ L HL+ G+ + +++ EM
Sbjct: 113 EAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+LM+A C D A L +M PD+ +Y +L+ C+ G+ A ++L+ +
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P LI LC G FD +K+L+++ KG P ++K + GK E
Sbjct: 253 NKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 308
Query: 372 EAHEYV 377
EA + V
Sbjct: 309 EACDVV 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 40/179 (22%)
Query: 251 HYNVLMRA-VCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
H N ++ V +G ++A L K + G P+ +YNLL+ C N + A Q+
Sbjct: 156 HLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ + +P +Y ILI C+ GQ + A + LD + KG P +I + G
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVP----DRTLIGGLCDQGM 271
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
++E +Y L EM+ KG P+FSV N
Sbjct: 272 FDEGKKY-----------------------------------LEEMISKGFSPHFSVSN 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
L+ +C +G ++ ++EM GF P + N LV C GK EAC V+E V K+
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLD 343
+ ++I L+C + + + FL+
Sbjct: 321 GETLHSDTWEMVIPLICNEDESEKIKLFLE 350
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN +++ C+ G + +V EM+R G P+ +++ L++S K E +VL +
Sbjct: 190 YNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM- 248
Query: 312 KDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
KD G+ + YNI I LCK + A+ LD + G++P +T++ +I + +
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EEA + ++ + Y L K G+ A + E M+K P+FS+ +
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSL 368
Query: 431 RKCLEKKNEI 440
L K +++
Sbjct: 369 VNGLAKDSKV 378
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 219 SSGIRLLIEMFTFTGSFDIVEYVIG--KDRR---KVNHYNVLMRAVCKKGDYERAGFLVK 273
SS L+I F D V V+ KDR V+ YN+ ++++CK+ + A L+
Sbjct: 222 SSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLD 281
Query: 274 EMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHG 333
M +G P+ TY+ L+ C F EA ++ + + P Y LI LCK G
Sbjct: 282 GMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGG 341
Query: 334 QFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYV 377
F+ A + K P +++ + K EEA E +
Sbjct: 342 DFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEM-KRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V N L+ A DY+ A + EM K G +PD+ TYN ++ C++G + +
Sbjct: 149 RTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYS 208
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
++ +E+ P ++ ++IS + D K L + +G+ + T+ I+S
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ K +EA + G S + YS L + + A+K+ M+++G KP+
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGF--DPDMTTYNLLVSCLCKNG-------- 298
V YN ++ A+C+ G++++A FL+ +M+ GF PD TY +L+S C+ G
Sbjct: 200 VYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKA 259
Query: 299 ---KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
+ EA ++ + +P YN LI CK + A + + + KG P +
Sbjct: 260 IRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQV 319
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYS--SNANYSLLATLHLKKGNMLLAQKILY 413
T+ + I+ Y + E A E ++ + K + ++ Y+ L ++ A+ ++
Sbjct: 320 TYNSFIRYYSVTNEIEGAIE-MMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVV 378
Query: 414 EMMDKGLKP 422
EM++ GL P
Sbjct: 379 EMVEAGLVP 387
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 256 MRAVCKKGDYER---AGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
M+ C+K R A + +EM GF PD+ TYN L+ CK + A ++ E ++
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIE-PCILTHAAVIKSYFELGKYE 371
+P + YN I + + A + + + G P T+ +I + E +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA + VV Y L+ +G + L++ M +G++ +S K++
Sbjct: 372 EARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRVMKIK 431
Query: 432 KCLEKKNEI 440
+ +K +
Sbjct: 432 PTMARKEVV 440
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
VN +N+++ + CK+ A + M + G P++ ++N+++ CK G A Q+L
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 309 TVEKDHG---LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+ G P YN +I+ CK G+ DLA + + G++ T+ A++ +Y
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLK 421
G +EA SK + Y+ + +G++ A +L +M K ++
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ 393
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V+ N M + + +R + KEM G+ ++ T+NL++ CK K EA V
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG---IEPCILTHAAVIKSYF 365
+ K P ++N++I CK G A + L K+ + + P +T+ +VI +
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+ G+ + A E + G K N Y L + + G+ A ++ EM KGL N
Sbjct: 303 KAGRLDLA-ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNT 361
Query: 425 SVFNKV 430
++N +
Sbjct: 362 VIYNSI 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ + K+G A +V M+ D+ TYN L++ K G EA +L ++
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 312 KDHGLPKE--FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K G +NI+I+ LCK G ++ A++ L + +G+ P +T+ +I S+ +
Sbjct: 560 KQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRS 619
Query: 370 YE---EAHEYVV 378
E E H+Y++
Sbjct: 620 QEKVVELHDYLI 631
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 7/223 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIG---KDRRKVNH--YNVLMRAVCKKGDYERAGFLVKEMKRSG 279
+I F G D+ E + G K N Y L+ A + G + A L EM G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
+ YN +V L G A VL + + F I++ LC++G A
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-NYSLLATL 398
+F +I+ K + I+ H ++ + K A + ++GS Q S +A ++ L
Sbjct: 417 EFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQ-ILGSMLVQGLSLDAISFGTLIDG 475
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEIG 441
+LK+G + A +I M+ N ++N + L K+ G
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAG 518
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMT--TYNLLVSCLCKNGKFAEACQVLET 309
YN L+ K G+ E A ++ +M++ + ++ T+N++++ LCK G + +A +VL+
Sbjct: 535 YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKF 594
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
+ + +P Y LI+ KH + + D + L+G+ P
Sbjct: 595 MVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 13/212 (6%)
Query: 213 VGGLCQSSGIR----LLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+ G C++ +R LL +M +G+F V YN ++ CK G + A
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVT---------YNSVINGFCKAGRLDLA 310
Query: 269 GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISL 328
+ +M +SG D + TY LV + G EA ++ + + + YN ++
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 329 LCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSS 388
L G + A L + K ++ T A V++ G +EA E+ + K+
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
Query: 389 NANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
++ L ++ + A +IL M+ +GL
Sbjct: 431 IVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
GK + YN ++ C + A + + +K + F P+ T +L+ LCKN
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++ + + P Y L+ K + + K +++ KGI P I++++ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ G+ +EA + + Y++L + K G ++ A + M+ G+KP
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 423 N 423
+
Sbjct: 810 D 810
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 10/229 (4%)
Query: 213 VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ G C+ + +++F G + I + V + +MR +G E A FL
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGI--------KPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
M + G +PD Y L+ CK+ K Q+ + ++++ N++I LL K
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNA-N 391
+ + A KF + + +EP I+T+ +I Y L + +EA E + + N
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVT 673
Query: 392 YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEKKNEI 440
++L + K +M A ++ M +KG KPN + + K +I
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVS---------------------- 292
L+ CK+G+ +RA L K M++ G +PD+ Y+ L+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 293 -------------CLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
K+G A A V + + P Y ILI LC+ G+ A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN-YSLLATL 398
+I +G+EP I+T++++I + + G + K Y + Y +L
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA-LYEDMIKMGYPPDVVIYGVLVDG 470
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K+G ML A + +M+ + ++ N VFN +
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 249 VNHYNVLMRAVCKKGD-YERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V Y +L++ +C+ G YE G + +KR G +P + TY+ L+ CK G +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
E + K P Y +L+ L K G A +F K+ + I ++ ++I + L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+++EA + A ++ + + + +G + A + + M GL+P+
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM K D E + L +EM+ G P + +Y++++ LCK G+ EA +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
LP Y ILI CK G+ A + + G++P L A+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
NV++ + K E A + +PD+ TYN ++ C + EA ++ E ++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P ILI +LCK+ D A + + KG +P +T+ ++ + + E
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + K S +YS++ K+G + A I ++ +D L P+ +
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
G + V+ + ++ A+ KG+ +A + + GF + + N ++ L + +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++L V P + LI+ CK G+ D A + +GIEP ++ ++ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
YF+ G H+ + K +S +++K G++ A + M+ +G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 423 NFSVFNKVRKCLEKKNEI 440
N + + K L + I
Sbjct: 390 NVVTYTILIKGLCQDGRI 407
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%)
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
K GD A + K M G P++ TY +L+ LC++G+ EA + + K P
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
Y+ LI CK G + + G P ++ + ++ + G A + V
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 381 ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ + ++ L + A K+ M G+KP+ + F V +
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
GK + YN ++ C + A + + +K + F P+ T +L+ LCKN
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++ + + P Y L+ K + + K +++ KGI P I++++ +I
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ G+ +EA + + Y++L + K G ++ A + M+ G+KP
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 423 N 423
+
Sbjct: 781 D 781
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVS---------------------- 292
L+ CK+G+ +RA L K M++ G +PD+ Y+ L+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 293 -------------CLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLAR 339
K+G A A V + + P Y ILI LC+ G+ A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 340 KFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN-YSLLATL 398
+I +G+EP I+T++++I + + G + K Y + Y +L
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA-LYEDMIKMGYPPDVVIYGVLVDG 470
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
K+G ML A + +M+ + ++ N VFN +
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y LM K D E + L +EM+ G P + +Y++++ LCK G+ EA +
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
LP Y ILI CK G+ A + + G++P L A+
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
NV++ + K E A + +PD+ TYN ++ C + EA ++ E ++
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P ILI +LCK+ D A + + KG +P +T+ ++ + + E
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + K S +YS++ K+G + A I ++ +D L P+ +
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
G + V+ + ++ A+ KG+ +A + + GF + + N ++ L + +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A ++L V P + LI+ CK G+ D A + +GIEP ++ ++ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
YF+ G H+ + K +S +++K G++ A + M+ +G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 423 NFSVFNKVRKCLEKKNEI 440
N + + K L + I
Sbjct: 390 NVVTYTILIKGLCQDGRI 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%)
Query: 261 KKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEF 320
K GD A + K M G P++ TY +L+ LC++G+ EA + + K P
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 321 NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGS 380
Y+ LI CK G + + G P ++ + ++ + G A + V
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 381 ASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
+ + ++ L + A K+ M G+KP+ + F V +
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 249 VNHYNVLMRAVCKKGD-YERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V Y +L++ +C+ G YE G + +KR G +P + TY+ L+ CK G +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
E + K P Y +L+ L K G A +F K+ + I ++ ++I + L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 368 GKYEEA 373
+++EA
Sbjct: 510 NRFDEA 515
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLC 330
++ EMK G+ PD T N LVS LC K EA +V+E + +P +Y +I+ LC
Sbjct: 158 IINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLC 217
Query: 331 -KHGQFDLARKFLDKITLKGIEP--CILTH-AAVIKSYFELGKYEEAHEYVVGSASKQSY 386
D+ + + ++ GI P +LT AA +++ E+ K E E+V +
Sbjct: 218 LARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEF 277
Query: 387 SSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
S Y ++ L+ +LA K++ M D+G P V KV
Sbjct: 278 ES---YEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKV 318
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ A C G+ +RA VKEM++ P T+ ++ K+G + +V + +
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P +N LI+ L + Q + A + LD++TL G+ T+ +++ Y +G
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+A EY ++ Y L K G M A + EM + + N V+N
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L++A CK G + A + KEM + YN+L+ + G EA +++ ++
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
K+ P Y IS K G + A + ++++ G++P I T+ +IK +
Sbjct: 757 KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +M+ GD +A ++ G D D+ TY L+ CK+G+ A V + +
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ F YNILI + G A + ++ +G++P I T+ + I + + G
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILY---EMMDKGLKPNFSVFN 428
A + + ++ N TL L +K L EM G+KP+ +V++
Sbjct: 782 RATQTI---EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ +M D ++ + K +K GF P + TY L++ K GK ++A +V V
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVM 510
Query: 312 KDHGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K+ G+ Y+++I+ K + A + + +G++P ++ + +I ++ +G
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ A + V + + + + + K G+M + ++ M G P FN +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 431 RKCLEKKNEI 440
L +K ++
Sbjct: 631 INGLVEKRQM 640
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV A+ K G E A L++EMK G PD+ Y L+ C GK +A +++ +
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN+L+S L ++G + + +++ +G +P +T++ +I+ K +
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 372 EAHEY 376
EA ++
Sbjct: 511 EAEDF 515
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 17/192 (8%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L ++C +G E+A ++K+M +P + ++ CK EA + +T+
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P F Y I+I C+ + A + + +GI+P ++T+ ++ Y +L
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP-- 676
Query: 372 EAHEY--VVGSASKQSYS------SNAN-------YSLLATLHLKKGNMLLAQKILYEMM 416
E HE V G K+ S S A Y++L K N+ A ++ M+
Sbjct: 677 EHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMI 736
Query: 417 DKGLKPNFSVFN 428
D GL+P+ +
Sbjct: 737 DSGLEPDMVAYT 748
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCK-NGKFAEACQVLETV 310
Y +++ C+ + ++A L ++MK+ G PD+ TY +L+ K + + E C V V
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 311 EKDHG--LPKEFN----------YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
K + +EF+ Y +LI CK + A + D++ G+EP ++ +
Sbjct: 689 GKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
+I SYF G + A V + K + S + + + + LK
Sbjct: 749 TLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 791
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 25/279 (8%)
Query: 188 FLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTF---TGSFDIVEYVIGK 244
F+ + DK T+ V KIM G ++ GI + F T S +++ + K
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 245 DRR-----------------KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY 287
++R + +N+ + CK E A + ++EMK GF P + +Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 288 NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITL 347
++ C C+ +F + ++L +E + P Y ++S L +F+ A + ++
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKR 322
Query: 348 KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNML 406
G +P L + +I + G+ EEA + S N + Y+ + ++
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 407 LAQKILYEMMDKGL-KPNFSVFNK-VRKCLEKKN--EIG 441
A ++L EM L P+ + +R C ++ + E+G
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVG 421
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 236 DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
+ VE + G +N +MR G++E A + + G + + + NLL+ LC
Sbjct: 142 EFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
K + +A VL + K H P +NI I CK + + A + ++ G PC++
Sbjct: 202 KEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYE 414
++ +I+ Y + ++ + +E + + S ++ Y +++++L+ +K A ++
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK-EFEEALRVATR 319
Query: 415 MMDKGLKPNFSVFN 428
M G KP+ +N
Sbjct: 320 MKRSGCKPDSLFYN 333
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 25/279 (8%)
Query: 188 FLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTF---TGSFDIVEYVIGK 244
F+ + DK T+ V KIM G ++ GI + F T S +++ + K
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 245 DRR-----------------KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY 287
++R + +N+ + CK E A + ++EMK GF P + +Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 288 NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITL 347
++ C C+ +F + ++L +E + P Y ++S L +F+ A + ++
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKR 322
Query: 348 KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNML 406
G +P L + +I + G+ EEA + S N + Y+ + ++
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 407 LAQKILYEMMDKGL-KPNFSVFNK-VRKCLEKKN--EIG 441
A ++L EM L P+ + +R C ++ + E+G
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVG 421
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 236 DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
+ VE + G +N +MR G++E A + + G + + + NLL+ LC
Sbjct: 142 EFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
K + +A VL + K H P +NI I CK + + A + ++ G PC++
Sbjct: 202 KEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYE 414
++ +I+ Y + ++ + +E + + S ++ Y +++++L+ +K A ++
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK-EFEEALRVATR 319
Query: 415 MMDKGLKPNFSVFN 428
M G KP+ +N
Sbjct: 320 MKRSGCKPDSLFYN 333
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 43/251 (17%)
Query: 219 SSGIRLLIEMFTFTG-SFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKR 277
S+G ++ E+F S D + +IGK + +N +M + ++G+ E + +EM+
Sbjct: 214 SNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEE 273
Query: 278 S-GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFD 336
G P++ +YN+L+ C G +EA +V E ++ + YN +I LC + +
Sbjct: 274 EVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVV 333
Query: 337 LARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE------------------------- 371
A++ + LKGIE LT+ ++ Y + G +
Sbjct: 334 KAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Query: 372 -------------EAHEYVVGSASKQS--YSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
EA + +V A +++ Y S Y LL + G M A I EM+
Sbjct: 394 EGLCDDRDGQRVVEAAD-IVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Query: 417 DKGLKPNFSVF 427
KG KP+ +
Sbjct: 453 GKGFKPSQETY 463
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKN---GKFAEACQVL- 307
Y L+ CK GD + + +EMKR GF+ D T LV LC + + EA ++
Sbjct: 354 YEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVK 413
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ V + P Y +L+ LC+ G+ D A ++ KG +P T+ A I Y +
Sbjct: 414 DAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIV 473
Query: 368 GKYE 371
G E
Sbjct: 474 GDEE 477
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
++ N+LM+ +C+ + A + +EM G PD +Y +L+ C GK EA +L
Sbjct: 151 RITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
Query: 308 ETV-----EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIE-PCILTHAAVI 361
++ +K G Y IL+ LC G+ D A + L KI KG++ P H
Sbjct: 211 YSMFWRISQKGSG-EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH---- 265
Query: 362 KSYFELGKYEEAHEYV--VGSASKQSYSSNA-----NYSLLATLHLKKGNMLLAQKILYE 414
+ E G +E + E + V ++ A +YS +AT ++G ++ +++L
Sbjct: 266 --HIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 415 MMDKGLKPNFSVFNKVRKCL 434
M KG +P ++ K L
Sbjct: 324 MRSKGFEPTPFIYGAKVKAL 343
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLV-KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y ++A+C+ G + A ++ KEM + P + YN+L+ LC +GK EA L+ +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 311 EKDHG-LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K + E Y L+ LC+ GQF A + ++++ +K P + T+ +IK ++ +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLA 396
EA ++ S+ ++ + LA
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALA 482
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 249 VNHYNVLMRAVCKKG-DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V YNVL++ +C G E G+L K K+ + TY LV LC++G+F EA QV+
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
E + P Y+++I LC + A +L+++ + + P
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 223 RLLIEMFTFTGSFDIVEYVIGKDRRK--------VNHYNVLMRAVCKKGDYERAGFLVKE 274
R+L++ G D ++GK RK +H +G ER L+ E
Sbjct: 230 RILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG-IERVKRLLTE 288
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
G P + +Y+ + + L + GK E +VL + P F Y + LC+ G+
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 335 FDLARKFLDKITLKG-IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANY 392
A ++K ++G P + + +IK + GK EA Y+ + + S +N Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
L + G L A +++ EM+ K P ++ + K L
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
++ N+LM+ +C+ + A + +EM G PD +Y +L+ C GK EA +L
Sbjct: 151 RITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
Query: 308 ETV-----EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIE-PCILTHAAVI 361
++ +K G Y IL+ LC G+ D A + L KI KG++ P H
Sbjct: 211 YSMFWRISQKGSG-EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH---- 265
Query: 362 KSYFELGKYEEAHEYV--VGSASKQSYSSNA-----NYSLLATLHLKKGNMLLAQKILYE 414
+ E G +E + E + V ++ A +YS +AT ++G ++ +++L
Sbjct: 266 --HIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 415 MMDKGLKPNFSVFNKVRKCL 434
M KG +P ++ K L
Sbjct: 324 MRSKGFEPTPFIYGAKVKAL 343
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLV-KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
Y ++A+C+ G + A ++ KEM + P + YN+L+ LC +GK EA L+ +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 311 EKDHG-LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
K + E Y L+ LC+ GQF A + ++++ +K P + T+ +IK ++ +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLA 396
EA ++ S+ ++ + LA
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALA 482
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 249 VNHYNVLMRAVCKKG-DYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V YNVL++ +C G E G+L K K+ + TY LV LC++G+F EA QV+
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
E + P Y+++I LC + A +L+++ + + P
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 223 RLLIEMFTFTGSFDIVEYVIGKDRRK--------VNHYNVLMRAVCKKGDYERAGFLVKE 274
R+L++ G D ++GK RK +H +G ER L+ E
Sbjct: 230 RILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG-IERVKRLLTE 288
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
G P + +Y+ + + L + GK E +VL + P F Y + LC+ G+
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 335 FDLARKFLDKITLKG-IEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSN-ANY 392
A ++K ++G P + + +IK + GK EA Y+ + + S +N Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
L + G L A +++ EM+ K P ++ + K L
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++R KGD A L+KEM G PD+ TY +++ C GK +A ++ + +
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG----IEPCILTHAAVIKSYFEL 367
K + Y+ ++ +CK G + A + L ++ + I P +T+ VI+++ E
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 368 GKYEEA 373
+ EEA
Sbjct: 288 RRVEEA 293
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ A K DY +K M+ GF + YN L+ K+ + + +L+ ++
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P + YNI+I++ + G D L ++ G+ P + ++ +IK+Y G E
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
EA V + Y+ L T + L A K M G+
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 260 CKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE-TVEKDHGLPK 318
CK G + A L + GF P +YN L+ LC N +A VL+ +++ H L
Sbjct: 403 CKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG 462
Query: 319 EFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA---HE 375
+ ++ L + LC G+ D+AR+ + + + P + +I + ++GK E+A +E
Sbjct: 463 K-TFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINE 521
Query: 376 YVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
S S+ + + ++ L +G+ +A K++ M +KG P S++ V +C+
Sbjct: 522 LFNKSGVDTSFKMFTSL-IYGSITLMRGD--IAAKLIIRMQEKGYTPTRSLYRNVIQCV 577
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
KV YN+ + G + A + M R G P + + L++ KN K A+A
Sbjct: 602 KVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFF 661
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ ++ G K+ Y ++I LCK + D A FL+++ +G++P I + I+
Sbjct: 662 HDL-REQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNE 720
Query: 368 GKYEEA 373
KY+EA
Sbjct: 721 EKYDEA 726
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
R + YN L + + ++G Y A +M G +P TYNL++ + + A +
Sbjct: 218 RTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF 277
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
E ++ P + +N +I+ C+ + D A K ++ I P ++++ +IK Y
Sbjct: 278 FEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP-NFS 425
+ + ++ S + YS L G M+ A+ IL MM K + P + S
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 426 VFNKV 430
+F K+
Sbjct: 398 IFLKL 402
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+ +++ C+ G + A ++EM++SG PD+ TY L+S L K+ + + +
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +N+ I L + A L + +EP +T+ VIK +F L ++
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LARFP 298
Query: 372 EAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ E V + + Y N Y + K GN LA + + M K PN +
Sbjct: 299 DMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEML 358
Query: 431 RKCLEKKNEI 440
K L KK ++
Sbjct: 359 LKGLVKKGQL 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 11/191 (5%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAG-FLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEAC 304
+R V +N ++ + D FL + G D D ++N+ + C+ G A
Sbjct: 138 KRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAY 197
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
+ +EK P Y LIS L KH + + + + LKG +P + T I+
Sbjct: 198 MAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFL 257
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNML-----LAQKILYEMMDKG 419
+ +A++ ++ Q + Y+++ KG L +A+++ M KG
Sbjct: 258 VNRRRAWDANDLLLLMPKLQVEPDSITYNMVI-----KGFFLARFPDMAERVYTAMHGKG 312
Query: 420 LKPNFSVFNKV 430
KPN ++ +
Sbjct: 313 YKPNLKIYQTM 323
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 164 YEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIR 223
+E + IL E N + ++ + F ++ + E +K+ D + E +
Sbjct: 87 FEWVEEILEEQN-KYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFN 145
Query: 224 LLIEMFTFTGSFDIVEYVIGKDRRK------VNHYNVLMRAVCKKGDYERAGFLVKEMKR 277
L+ + FD+VE + + K V YN L++ +C KG + A L+ E++
Sbjct: 146 ALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIEN 205
Query: 278 SGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDL 337
G PD T+N+L+ GKF E Q+ + + + +YN + L + +
Sbjct: 206 KGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEE 265
Query: 338 ARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
DK+ ++P + T A+IK + GK +EA
Sbjct: 266 MVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 200 VECVRKIMDVLNEVGGLCQSSGIRL---LIEMFTFTGSFDIVEYVIGKDR-RKVNHYNVL 255
VE + I V+ ++G SS +R+ ++ ++ G D + R R V +N +
Sbjct: 197 VEAGKVIHSVVIKLG---MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV 253
Query: 256 MRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG 315
+ A C+ G +E A LVKEM++ G P + T+N+L+ + GK A +++ +E
Sbjct: 254 LLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI 313
Query: 316 LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT------------------- 356
F + +IS L +G A K+ L G+ P +T
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 357 -HAAVIK---------------SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
H+ +K Y + GK E+A + +K Y+ N+ + T +
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNS----MITGYC 429
Query: 401 KKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
+ G A ++ M D L+PN +N +
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTM 459
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEM-KRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V N L+ A DY+ A + EM K G +PD+ TYN ++ LC++G + +
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYS 203
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
++ +E+ P ++ ++I K +FD RK + + G+ + T+ +I+
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ K EA + G S + ++ YSLL + N+ A + M+ G KP+
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 426 VFNKVRKCL 434
+ + CL
Sbjct: 324 CYFTLIHCL 332
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++R +C+ G + +V EM+R P ++ L++ K KF E +V+ ++
Sbjct: 185 YNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMD 244
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ YNI+I LCK + A+ +D + + P +T++ +I + +
Sbjct: 245 EFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLD 304
Query: 372 EAH---EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
EA E +V + K S ++L+ L K G+ A + E M+K P+FSV
Sbjct: 305 EAMNLFEVMVCNGYKPD--SECYFTLIHCL-CKGGDFETALILCRESMEKNWVPSFSVMK 361
Query: 429 KVRKCLEKKNEI 440
+ L ++++
Sbjct: 362 WLVNGLASRSKV 373
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+VL+ + E A EM+RSG D+ +N L+ CK + +VL+ ++
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P + NI++ L + G+ D A K+ +K EP T+ VIK + E + E
Sbjct: 370 SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEME 428
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
A + K + S +S+L ++ A +L EM++ G++P+ F ++R
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLR 488
Query: 432 KCLEKK 437
+ L K+
Sbjct: 489 QLLIKE 494
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 235 FDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCL 294
+D++ + K V + ++MR + + A + M++ P++ +N L+S L
Sbjct: 154 WDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL 213
Query: 295 CKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCI 354
CK+ +A +V E + +D P Y+IL+ K AR+ ++ G P I
Sbjct: 214 CKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 272
Query: 355 LTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYE 414
+T++ ++ + G+ +EA V + YS+L + + + A E
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE 332
Query: 415 MMDKGLKPNFSVFN 428
M G+K + +VFN
Sbjct: 333 MERSGMKADVAVFN 346
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 165/421 (39%), Gaps = 76/421 (18%)
Query: 68 SSYPCSSF-KGRPYASAKQVSEIVALIREGVND---------LEFSLNRVNVSLSMALIV 117
S + C SF R Y+S++QV + VA + + ++ L+ +L++ + +S ++
Sbjct: 46 SRFCCKSFLSARLYSSSEQVRD-VADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVE 104
Query: 118 EIFHILASERVSALQFFHWL-KGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNH 176
++ + + + +FF W K H E + Y+ M ++N
Sbjct: 105 DVLNRFRNAGLLTYRFFQWSEKQRHYEHSV--RAYHMMIESTAKIRQYKLMWDLINAMRK 162
Query: 177 RRVHLGRNAFGFLLVL-NLDKASTVECVRKIMDVLNE-------------VGGLCQSSGI 222
+++ N F +V+ +A V+ +V+ + + LC+S +
Sbjct: 163 KKML---NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNV 219
Query: 223 RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDP 282
R E+F E + + Y++L+ K+ + +A + +EM +G P
Sbjct: 220 RKAQEVF---------ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHP 270
Query: 283 DMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNY-------------------- 322
D+ TY+++V LCK G+ EA ++ +++ P F Y
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 323 ---------------NILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
N LI CK + + L ++ KG+ P + +++ E
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
G+ +EA + V K Y+++ + +K M A K+ M KG+ P+ F
Sbjct: 391 GEKDEAFD-VFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 428 N 428
+
Sbjct: 450 S 450
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 222 IRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFD 281
+R LIE +FD+ +I + Y ++++ C+K + E A + K M++ G
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKF 341
P M T+++L++ LC+ +AC +LE + + P + L LL K + D+ +
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFL 503
Query: 342 LDKITLKGIEP 352
+K+ + EP
Sbjct: 504 NEKMNVLVNEP 514
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIGK-DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
LI+M+ GS + D R V ++ L+ + G E A L KEMK +G +P+
Sbjct: 514 LIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPN 573
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFL 342
T+ +++ G E ++ T++ +HG+ P + + + ++ LL + G+ + A +F+
Sbjct: 574 HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFI 633
Query: 343 DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKK 402
D++ L EP ++ ++ + G A + ++S A + LL ++H
Sbjct: 634 DEMKL---EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA-HVLLCSMHASS 689
Query: 403 GN 404
GN
Sbjct: 690 GN 691
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +++ +C A + K +K G+ PD Y ++ C+ G A ++ +
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P EF YN++I K G+ L F +++ G +L+ +IK + GK +
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 372 EAHEYVVGSASKQSYSSNA-NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA E + + S+ + NA Y+ L K+ + K+ E+ GLKP+ + +
Sbjct: 406 EAFE-IFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 431 RKCLEKKNEIG 441
+ L+ + +
Sbjct: 465 VRNLKMSDSVA 475
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+RA+C GD L+K+ + G DP Y L+S C+ G +A +VL T+ +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 315 GLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH 374
P + Y +I LC + + A + KG P + + +I+ + E G A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 375 EYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKG 419
+ K + Y+++ H K+G + L + EM+ G
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N ++ K +R L KEM S FD + L+ LC G +E ++L+ K
Sbjct: 184 NSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLK 241
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P ++ Y LIS C+ G + + L + P + + +IK K E
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLE 301
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A+ K Y+ + +KG + A+K+ +EM+ KG++PN +N
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYN 357
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 207 MDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYE 266
MD++ + G ++ ++L EM + D+V YN ++RA+ E
Sbjct: 231 MDIMCKSGKPWKA--VKLYKEMKSRRMKLDVV------------AYNTVIRAIGASQGVE 276
Query: 267 RAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILI 326
+ +EM+ G +P++ T+N ++ LC++G+ +A ++L+ + K P Y L
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF 336
Query: 327 SLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSY 386
S L K + ++ G+ P + T+ +++ FE + + YV + +
Sbjct: 337 SRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRK-FERWGFLQPVLYVWKTMKESGD 392
Query: 387 SSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ + A Y+ + ++KG + +A++ EM+++GL P
Sbjct: 393 TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+++R K G + + K+M G D+ +Y++ + +CK+GK +A ++ + ++
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
YN +I + + + ++ +G EP + TH +IK E G+
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+A+ + + + Y L + L+K + +L+ + M+ G++P +
Sbjct: 312 DAYRMLDEMPKRGCQPDSITYMCLFS-RLEKPSEILS--LFGRMIRSGVRPKMDTY 364
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET-V 310
Y +++ C GD A L M GFD D+ ++ L K +F EA +V V
Sbjct: 218 YRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMV 277
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K G Y ++I LCK+G+ D+ARK D++ +G+ LT A++I +
Sbjct: 278 SKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRV 337
Query: 371 EEAHEYVVG 379
EA+ V G
Sbjct: 338 VEAYGLVEG 346
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN L+ ++ + G E L EM PD+ T+N LV+ CK G EA Q + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P F Y I+ C+ + D A K ++T G +++ +I FE K +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
EA +V + Y++L G A + +M + G+KP+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAE 302
G R +V+ Y L+ + + + A L+ +MK P++ TY +L+ LC +G+ +E
Sbjct: 220 GCHRNEVS-YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
Query: 303 ACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
A + + + + P + Y +LI C D A L+ + G+ P ++T+ A+IK
Sbjct: 279 AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 363 SYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
+ + +A + + Y+ L GN+ A ++L M + GL P
Sbjct: 339 GFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Query: 423 N 423
N
Sbjct: 398 N 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 236 DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
+++E ++ D + +N L+ CK G A V + ++G DPD TY ++ C
Sbjct: 145 EMLEDLVSPD---IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 296 KNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL 355
+ + A +V + + ++ E +Y LI L + + D A L K+ P +
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 356 THAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
T+ +I + G+ EA + + Y++L + A +L M
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 416 MDKGLKPNFSVFNKVRKCLEKKN 438
++ GL PN +N + K KKN
Sbjct: 322 LENGLMPNVITYNALIKGFCKKN 344
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y + C++ + + A + KEM ++G + +Y L+ L + K EA +L ++
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMK 252
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D+ P Y +LI LC GQ A +++ GI+P + +I+S+ +
Sbjct: 253 DDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + Y+ L KK N+ A +L +M+++ L P+ +N +
Sbjct: 313 EASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTL 370
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +L+ VC + A +LV ++ +GF PD YN ++ C K +EA V + ++
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
++ P + YN LI L K G+ + AR +L + G EP T+ +++
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
++ +R++C+ G + A L+KE+ PD TYN L+ LCK + ++ +
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 313 DHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D + P ++ ILI +C A + K+ G +P + ++K + L K
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA + Y+ L K G + A+ L M+D G +P+ + +
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFD--PDMTTYNLLVSCLCKNGKFAEACQVLET 309
YN L++ +CK D V EM R FD PD+ ++ +L+ +C + EA ++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
+ P F YN ++ C + A K+ +G+EP +T+ +I + G+
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 370 YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKG 403
EEA Y+ A Y+ L +KG
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 254 VLMRAVCKKGDYERAGF--LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+L+ C+ D + ++ M +G +PD T ++ V LC+ G+ EA +++ +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLK-GIEPCILTHAAVIKSYFELGKY 370
+ H P + YN L+ LCK + +F+D++ ++P +++ +I +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 371 EEAHEYVVGSASKQSYSSNA---NYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
EA Y+V + + N + L KG+ A + +M ++G++P+ +
Sbjct: 247 REAM-YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE--AVGVYKKMKEEGVEPDQITY 303
Query: 428 NKVRKCLEKKNEI 440
N + L K +
Sbjct: 304 NTLIFGLSKAGRV 316
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ +CK+G E + L+ EMK +G +P T N + CL + F A +L+ +
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P + L+ LC++G+ A K+LD + +G ++ A I + +
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
E + Y +L K + A + EM+ KGLKP + +N +
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 432 KCLEKKNEI 440
K+ EI
Sbjct: 657 DGWCKEGEI 665
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+VL++A+CK A L EM G P + TYN ++ CK G+ + +
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D P Y LI LC G+ A +++ K P +T A+I+ + G
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
EA Y K+ +A Y L + L N+ I EM+ KG P
Sbjct: 737 EALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++++ V DY +A L E+ G PD+ TYN+ ++ LCK A +++ ++
Sbjct: 289 YTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMN 348
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P YNILI L K G A+ ++ G+ T +I +Y E+ +
Sbjct: 349 KLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVV 408
Query: 372 EAH 374
AH
Sbjct: 409 CAH 411
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 179 VHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGI-RLLIEMFTFTGS--F 235
V L + FG +L+ L + V+C +++ +++ + RLL + S F
Sbjct: 175 VRLEESTFG-ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 236 DIVEYVIGKDRRK------VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNL 289
D++ Y+ +D RK + Y V+MR + + G + ++ +MK +PD+ Y +
Sbjct: 234 DVIGYL--EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTI 291
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
++ + + + +A ++ + + P + YN+ I+ LCK + A K + + G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 350 IEPCILTHAAVIKSYFELGKYEEA 373
EP ++T+ +IK+ + G A
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRA 375
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKF--AEACQV 306
+ +NVL++A CKK E A +VK+M+ G PD TYN + +C + G+ AE+ V
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+ V K+ P I++ C+ G+ +F+ ++ +E ++ ++I + E
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 367 ---------------LGKYEEAHEYVVGSASKQSY----------SSNANYSLLATLHLK 401
L + E E V K + YS +
Sbjct: 308 VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSS 367
Query: 402 KGNMLLAQKILYEMMDKGLKPN---FSVFNK--VRKCLEKKNE 439
G M A ++ EM+ G+KP+ +S+ K VR KK E
Sbjct: 368 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ +M A G E+A + KEM ++G PD Y++L + + +A ++LET+
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL---G 368
+ P + +IS C +G D A + +K+ G+ P I T ++ Y E+
Sbjct: 418 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 476
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLA 396
K EE + + G K N+ + LLA
Sbjct: 477 KAEEVLQMMRGCGVK---PENSTFLLLA 501
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N ++ A + G+ E A + +MK G +P +TYN L+ GK + ++L+ +
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 312 KDHGL---PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
++ + P +N+L+ CK + + A + + K+ G+ P +T+ + Y + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 369 KYEEAHEYVVGS-ASKQSYSSNANY-SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
+ A VV K+ N ++ + ++G + + + M + ++ N V
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 427 FN 428
FN
Sbjct: 298 FN 299
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V HY L+ G+ ++A + +EM G P++ TYN ++ LC G+F EAC +L+
Sbjct: 724 VLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 783
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
+E P Y+ L+ L K G+ ARK + ++ KG
Sbjct: 784 EMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 275 MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ 334
MK G DP + Y L+ +G+ +A ++ + LP F YN +I LC G+
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 335 FDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSY 386
F A L ++ +G P + ++ ++ + GK EA + + K Y
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%)
Query: 251 HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
H+N ++ A K + A + K M +G P + +Y L+S L K + EA +V +
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
K P + Y + S+L +F+L L ++ KGIEP ++T AVI G
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A+E+ S+ + Y +L LA ++ + ++GLK + ++ V
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAV 639
Query: 431 RKCLE 435
K E
Sbjct: 640 VKSAE 644
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V Y+ ++ K G + L MK+ +PD YN +V L K +EA +++
Sbjct: 302 VVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMK 361
Query: 309 TVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIK 362
T+E++ G+ P YN LI LCK + + A++ D++ KG+ P I T+ A ++
Sbjct: 362 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS-GFDPDMTTYNLLVSCLCKNGKFAEACQ 305
RKV YN ++ A+ K A L+K M+ G +P++ TYN L+ LCK K EA Q
Sbjct: 337 RKV--YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQ--FDLARKFLDKITLKGIEPCILTHAAVIKS 363
V + + + P Y+ + +L + G+ F+L L K+ G EP + T+ +I+
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRIL-RTGEEVFEL----LAKMRKMGCEPTVETYIMLIRK 449
Query: 364 YFELGK-------YEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
++E E VG ++Y ++ G + A EM
Sbjct: 450 LCRWRDFDNVLLLWDEMKEKTVG-------PDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 417 DKGLKPNFSVFNKVRKCLEKKN 438
DKG++PN +V + ++ K
Sbjct: 503 DKGMRPNENVEDMIQSWFSGKQ 524
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 252 YNVLMRAVCKK-GDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
+N+++ C G A + EM G D+ +Y+ ++SC K G + ++ + +
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI-TLKGIEPCILTHAAVIKSYFELGK 369
+K+ P YN ++ L K AR + + KGIEP ++T+ ++IK + K
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 370 YEEAHE 375
EEA +
Sbjct: 389 TEEAKQ 394
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/342 (17%), Positives = 137/342 (40%), Gaps = 16/342 (4%)
Query: 103 SLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPELCCDPQIXXXXXXXXXXXX 162
+L + V + L+VE+ + + L+FF W+ G + +
Sbjct: 634 ALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWV-GKRNGYKHNSEAYNMSIKVAGCGK 692
Query: 163 XYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGI 222
++ M + E + + ++ + ++++ + + + ++G + SS
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWA-IMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 223 RLLIEMF---------TFTGSF-DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLV 272
+ LI + T +F +++ DR V Y + +C+ G+ + A +
Sbjct: 752 KCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY---LGCLCEVGNTKDAKSCL 808
Query: 273 KEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKH 332
+ + GF P Y++ + LC+ GK EA L + E + L ++ Y ++ L +
Sbjct: 809 DSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQR 867
Query: 333 GQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY 392
G A ++ + G +P + + ++I +F+ + E+ E + S Y
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 393 SLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCL 434
+ + ++ G + A M ++G P+F ++K CL
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++ +RA+C+ G E A + + D TY +V L + G +A + +++
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P Y LI K Q + + K+ + EP ++T+ A+I Y LGK E
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
EA + + YS + A K+L EM+DKG+ P+ F V
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
+V YN ++ + + + LV EM+++G D D+ T+ +L+S K K + V
Sbjct: 188 RVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVF 247
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
E + K YNI+I LC G+ DLA +F ++ KGI
Sbjct: 248 EKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 108/272 (39%), Gaps = 7/272 (2%)
Query: 173 EFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFT 232
E + + G + LL + K+ V+ V+ I D + + + + L++ F +
Sbjct: 284 EMMEKGITFGLRTYKMLLDC-IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
Query: 233 GSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTY 287
G +I + + K ++ +L++ +C+ A +V MKR D D Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVY 401
Query: 288 NLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITL 347
+++S + ++A + E ++K P+ Y ++ L K QF+ +++
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 348 KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLL 407
GIEP + AV+ + + EA + K + +YS+ +
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 408 AQKILYEMMDKGLKPNFSVFNKVRKCLEKKNE 439
KI +M + +F+ V +EK E
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ K G E+A L +EMKR+G P + TY L+ L K G+ EA + +
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY- 370
+D P N L+++L K G+ + ++ + P ++++ VIK+ FE +
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
E + + S YS+L + K + A +L EM +KG P
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKN-GKFAEACQVLETVE 311
N LM + K G E + EM P + +YN ++ L ++ +E + ++
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D P EF Y+ILI CK + + A L+++ KG PC + ++I + + +YE
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
A+E S+ Y+++ K G + A + EM ++G P+ +N
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 190 LVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRK- 248
L+ L KA E ++ L E G S ++I+ F G + + + +
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 249 ----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEAC 304
V YN LM + K G A L+++M+ +G D+ ++N++++ + G A
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI 569
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
++ ET++ P YN L+ G F+ A + + ++ KG E +T+++++ +
Sbjct: 570 EMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y V+++ K G A L EMK G PD+ YN L+S + K G EA +L +E
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 312 KDHGLPKEFN-YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
++G + N +NI+++ + G A + + I GI+P +T+ ++ + G +
Sbjct: 542 -ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 371 EEA 373
EEA
Sbjct: 601 EEA 603
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 81/183 (44%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y++L+ CK E+A L++EM GF P Y L++ L K ++ A ++ + ++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ G Y ++I K G+ A +++ +G P + + A++ + G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
EA+ + + +++++ + G A ++ + G+KP+ +N +
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 432 KCL 434
C
Sbjct: 592 GCF 594
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFD--PDMTTYNLLVSCLCKNGKFAEACQVLET 309
YN ++ + ++G +E+ + EM G D PD TY+ L+S K G+ A ++ +
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEG-DCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGK 369
++ + P E Y L+ + K G+ + A +++ G P + T+ +IK + G+
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 370 YEEAHEY 376
+EA+ +
Sbjct: 319 VDEAYGF 325
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ-VLETV 310
Y+ L+ + KKG A +L EMK SG PD + YN L++ A+A + V +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 311 EKDHGL----PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+K G+ P YNIL+ + G+ D + + + P + T V+ +Y +
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G +E + S + +++L + KK ++ +M KP
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 427 FNKV 430
FN +
Sbjct: 316 FNSM 319
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+RA + G ++ L K++ S PD+ T+N ++ KNG E VL +
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +N+LI K +F+ + + +P + T ++I +Y + +
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 372 EAHEYVVGSASKQSY-SSNANYSLLATLHLKKGNMLLAQKILYEM 415
+A E+V + +Y S Y + ++ G++ A++I E+
Sbjct: 331 KA-EWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ-VLETV 310
Y+ L+ + KKG A +L EMK SG PD + YN L++ A+A + V +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 311 EKDHGL----PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+K G+ P YNIL+ + G+ D + + + P + T V+ +Y +
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 367 LGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSV 426
G +E + S + +++L + KK ++ +M KP
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 427 FNKV 430
FN +
Sbjct: 316 FNSM 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+RA + G ++ L K++ S PD+ T+N ++ KNG E VL +
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P +N+LI K +F+ + + +P + T ++I +Y + +
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 372 EAHEYVVGSASKQSY-SSNANYSLLATLHLKKGNMLLAQKILYEM 415
+A E+V + +Y S Y + ++ G++ A++I E+
Sbjct: 331 KA-EWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 10/212 (4%)
Query: 223 RLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRS---G 279
+LL +G ++ V D R Y LM+ K G +++ M+R
Sbjct: 391 KLLPNSVDPSGEPPLLPKVFAPDSR---IYTTLMKGYMKNGRVADTARMLEAMRRQDDRN 447
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLP-KEFNYNILISLLCKHGQFDLA 338
PD TY +VS G A QVL + + G+P YN+L+ CK Q D A
Sbjct: 448 SHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR-MGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 339 RKFLDKITLK-GIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLAT 397
L ++T GIEP ++++ +I + A + ++ + +Y+ L
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 398 LHLKKGNMLLAQKILYEMM-DKGLKPNFSVFN 428
G LA ++ EMM D +K + +N
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRVKVDLIAWN 598
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y ++ A G +RA ++ EM R G + TYN+L+ CK + A +L +
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 312 KDHGL-PKEFNYNILIS--LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
+D G+ P +YNI+I +L LA F +++ +GI P +++ ++K++ G
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALA--FFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 369 KYEEAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + A+ + + +++L + + G + AQ+++ M + G PN + +
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 428 NKVRKCLEKKNEIG 441
+ + + + G
Sbjct: 633 GSLANGVSQARKPG 646
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV++R V + ++ A L EM++ PD TY+ L++ K G F A L+ +E
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D Y+ LI L + + A ++ GI P ++ + ++I Y + +
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 277
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEM 415
EA + + +YS L +++++ L A + EM
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 247 RKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQV 306
R + +N L+ K G A L EM +SG D T+N ++ +G +EA +
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 307 LETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
L+ +E+ P YNIL+SL G + A ++ KI G+ P +TH AV+
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 246 RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQ 305
R V YNV+++A K +E+A L K MK G PD TYN L L EA +
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 306 VLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYF 365
+L + P Y +I+ + G A + + G++P + + ++I +
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATL---HLKKGNMLLAQKILYEMMDKGLKP 422
E G EEA +Y + + +N+ +L +L + K G + A+++ +M D P
Sbjct: 632 ESGMVEEAIQYF---RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 423 NFSVFNKV 430
+ + N +
Sbjct: 689 DVAASNSM 696
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+L+ GD E A +++++ G PD T+ ++ LC+ AE V+ ++
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCIL---THAAVIKSYFELG 368
++ E + +++ + G A+ ++ L C+L T AAVI Y E G
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD----CVLSSTTLAAVIDVYAEKG 493
Query: 369 KYEEAHEYVVGSASKQSYSSNANYSLLATLHLKK-GNMLLAQKILY---EMMDKGLKPNF 424
+ EA G K++ S N L + +K G L +K L M ++G P+
Sbjct: 494 LWVEAETVFYG---KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 425 SVFNKVRKCL 434
+N + + L
Sbjct: 551 CTYNSLFQML 560
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%)
Query: 248 KVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
++ Y++++ +CK G + ++EMK+ G PD++ YN L+ CK A ++
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ + + YN+LI L + G+ + + + DK+ +GIEP + ++I+ +
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 368 GKYEEAHE 375
K E A E
Sbjct: 516 TKIEAAME 523
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 265 YERAGFLVKE---MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFN 321
++++ L+K + G+ ++ +Y+L++S LCK G+ E+ L+ ++K+ P
Sbjct: 375 HDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSL 434
Query: 322 YNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
YN LI CK A+K D++ ++G + + T+ +I+ E G+ EE+
Sbjct: 435 YNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEES 486
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ ++ + + + + K MK G D+ TYN+++ C + AC ++ +
Sbjct: 556 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 615
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D PK + L+ +L F+ A LD+ L+ I +L++ +++ FE G
Sbjct: 616 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMI- 674
Query: 372 EAHEYVV 378
+ EY+V
Sbjct: 675 DVIEYIV 681
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ ++ + + + + K MK G D+ TYN+++ C + AC ++ +
Sbjct: 528 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 587
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+D PK + L+ +L F+ A LD+ L+ I +L++ +++ FE G
Sbjct: 588 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMI- 646
Query: 372 EAHEYVV 378
+ EY+V
Sbjct: 647 DVIEYIV 653
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 225 LIEMFTFTGSFDIVEYVIGK-DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
L++M+ +GS + + +R V +N L+ A + G + A + +EM+R G P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
++ +++ +G E E ++KD +P+ ++Y ++ LL + G + A +F++
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 344 KITLKGIEPCILTHAAVIKS-----YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
++ IEP A++ + ELG Y H + + + +L +
Sbjct: 423 EMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP------DDPGPHVILYNI 473
Query: 399 HLKKGNMLLAQKILYEMMDKGLK 421
+ G A ++ +M + G+K
Sbjct: 474 YASGGRWNDAARVRKKMKESGVK 496
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+L+ A + G A + + MK G D+ TYN L+ K + + ++++ +
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P YNILI + G D A + + ++ +G P L VI + + G ++E
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A A + S L + K M A + +++D GLKP+ ++N +
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 77/188 (40%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ + +C GD RA + +E+ G PD Y ++ C G+ +A Q +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P ILI + G A + +G++ ++T+ ++ Y + +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+ E + S A Y++L + +G + A +I+ E++ +G P+ F V
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 432 KCLEKKNE 439
K+ +
Sbjct: 556 GGFSKRGD 563
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 215 GLCQSSGIRLLIEMFTFTG---SFDIVEYVIGKDRR-KVNHYNVLMRAVCKKGDYERAGF 270
G+C I LL E+ G + + VE+++ + R ++ +R C G +++
Sbjct: 237 GVC----ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWE 292
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL----------------------- 307
L+ MK G PD+ + + + LCK G EA VL
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 308 ------ETVEKDHGL---PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
E ++ H P F Y+ +S +C G A +I G+ P + +
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
+I Y LG+ ++A +Y + S ++L + G++ A+ + M +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 419 GLKPNFSVFNKVRKCLEKKNEI 440
GLK + +N + K +++
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQL 494
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM K + L+ EM+ +G PD+ TYN+L+ + G EA +++ +
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P + +I K G F A + ++P ++T +A++ Y + + E
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A Y+ L + G++ A +++ M+ +G+ PN S + +
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 432 KCLEKK 437
LE K
Sbjct: 661 LGLEGK 666
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
+L+ A + G A + + MK G D+ TYN L+ K + + ++++ +
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 313 DHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
P YNILI + G D A + + ++ +G P L VI + + G ++E
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKV 430
A A + S L + K M A + +++D GLKP+ ++N +
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 77/188 (40%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ + +C GD RA + +E+ G PD Y ++ C G+ +A Q +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K P ILI + G A + +G++ ++T+ ++ Y + +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+ E + S A Y++L + +G + A +I+ E++ +G P+ F V
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 432 KCLEKKNE 439
K+ +
Sbjct: 556 GGFSKRGD 563
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 215 GLCQSSGIRLLIEMFTFTG---SFDIVEYVIGKDRR-KVNHYNVLMRAVCKKGDYERAGF 270
G+C I LL E+ G + + VE+++ + R ++ +R C G +++
Sbjct: 237 GVC----ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWE 292
Query: 271 LVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL----------------------- 307
L+ MK G PD+ + + + LCK G EA VL
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 308 ------ETVEKDHGL---PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHA 358
E ++ H P F Y+ +S +C G A +I G+ P + +
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 359 AVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDK 418
+I Y LG+ ++A +Y + S ++L + G++ A+ + M +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 419 GLKPNFSVFNKVRKCLEKKNEI 440
GLK + +N + K +++
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQL 494
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM K + L+ EM+ +G PD+ TYN+L+ + G EA +++ +
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ +P + +I K G F A + ++P ++T +A++ Y + + E
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+A Y+ L + G++ A +++ M+ +G+ PN S + +
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 432 KCLEKK 437
LE K
Sbjct: 661 LGLEGK 666
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRKVNH--------YNVLMRAVCKKGDYERAGFLVKEMK 276
L+ ++ +G FD ++ +R K +H Y++L+++ + +++ L+ +M+
Sbjct: 191 LVSAYSRSGRFDAAFTLL--ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 277 RSGFDPDMTTYNLLVSCLCKNGKFAE-ACQVLETVEKDHGLPKEFNYNILISLLCKHGQF 335
R G P+ TYN L+ K F E +++ + +D P + N + +GQ
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 336 DLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
++ +K GIEP I T ++ SY + G Y++
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 254 VLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKD 313
++M CK+ E+A L +EM G + Y LVS ++G+F A +LE ++
Sbjct: 157 IVMLGKCKQP--EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSS 214
Query: 314 HG-LPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
H P Y+ILI + FD + L + +GI P +T+ +I +Y + + E
Sbjct: 215 HNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGN--MLLAQKILYEMMDKGLKPNFSVFN 428
++ + ++ +++ +TL GN + + + + G++PN FN
Sbjct: 275 MESTLIQMLGEDDCKPDS-WTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 331
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+NV++ C G +E A + ++M PD ++N L++ LC N AEA ++ +E
Sbjct: 353 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEME 412
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ + P E+ Y +L+ K G+ D + + + P + + + + GK +
Sbjct: 413 EKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMD 417
+A + SK A Y + + G + KI+ EM+D
Sbjct: 473 DAKSFFDMMVSKLKMDDEA-YKFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 239 EYVIGKD---RRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDP-----DMTTYNLL 290
E +G++ R YN ++ A+ + G ++ A L +K+ P ++ T+N++
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM 356
Query: 291 VSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
V+ C GKF EA +V + P ++N L++ LC + A K ++ K +
Sbjct: 357 VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Query: 351 EPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQK 410
+P T+ ++ + F+ GK +E Y + A Y+ L +K G + A K
Sbjct: 417 KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-K 475
Query: 411 ILYEMMDKGLKPNFSVFNKVRKCL 434
++MM LK + + + + L
Sbjct: 476 SFFDMMVSKLKMDDEAYKFIMRAL 499
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 117/288 (40%), Gaps = 12/288 (4%)
Query: 95 EGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHWLKGSHPELCCDPQIXXXX 154
+G + ++ SL+ + + LS+ ++ ++ + + + FF W P + D
Sbjct: 99 KGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAV-REPGVTKDVGSYSVI 157
Query: 155 XXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNE-- 212
+ M+ +L V G N L + +D V VR+ +++ E
Sbjct: 158 LRALGRRKLFSFMMDVLKGM----VCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 213 -VGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVN----HYNVLMRAVCKKGDYER 267
G C + L+ + V + + YN+++ K G+ E
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 268 AGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILIS 327
++KEM SGF PD +Y+ L+ L + G+ ++ ++ + ++ +P YN +I
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 328 LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHE 375
FD + ++ ++ + EP + T++ ++ + K +A E
Sbjct: 334 NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 222 IRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFD 281
+R IE+F + SF + + +N L+R +C++ + A V K+
Sbjct: 202 VRRAIELFEESESFGV--------KCSTESFNALLRCLCERS-HVSAAKSVFNAKKGNIP 252
Query: 282 PDMTTYNLLVSCLCKNGKFAEACQVL-ETVEKDHGLPKEFNYNILISLLCKHGQFDLARK 340
D +YN+++S K G+ E +VL E VE G P +Y+ LI L + G+ + + +
Sbjct: 253 FDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFG-PDCLSYSHLIEGLGRTGRINDSVE 311
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
D I KG P + A+I ++ ++E+ Y ++ + YS L + +
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 401 KKGNMLLAQKILYEMMDKGLKP 422
K + A +I EM+ +G+ P
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLP 393
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 245 DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEAC 304
++R V YNV+++A E+A L + M G PD TYN LV L +
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSY 364
LE + + + Y +IS K GQ ++A + ++ IEP ++ + +I ++
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 365 FELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+ G ++A YV ++ Y+ L L+ K G + A+ I +++
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 104/291 (35%), Gaps = 46/291 (15%)
Query: 176 HRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTFTGSF 235
H + R ++G + L+ ++E V + E L +L E + +
Sbjct: 114 HTKCSTKRLSYGGCIPAILEALDSIEDVEDALSPWAER--LSNKERTIILKEQIHWERAV 171
Query: 236 DIVEYVIGKDRRKVN--HYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSC 293
+I E+ K ++N HYN+++R + K + L EM R G P +TY L+
Sbjct: 172 EIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDV 231
Query: 294 LCKNGKFAEACQVLETVEKDHGLPKE---------------------------------- 319
K G A L + K P E
Sbjct: 232 YSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKAD 291
Query: 320 -------FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
+ YN +I K GQ A + ++ +GI P +T +I Y G+ E
Sbjct: 292 SHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGE 351
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
++ + Y++L +LH K ++ A EM D GLKP+
Sbjct: 352 VTS-LMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 9/205 (4%)
Query: 236 DIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLC 295
++VEY I D V Y VL+ A G+ ++A V+ MK +G + YN L+
Sbjct: 600 EMVEYNIEPD---VVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYT 656
Query: 296 KNGKFAEA----CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIE 351
K G EA ++L++ K P + N +I+L + A D + +G E
Sbjct: 657 KVGYLDEAEAIYRKLLQSCNKTQ-YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-E 714
Query: 352 PCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKI 411
T A ++ Y + G++EEA + + + +Y+ + L G A +
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 412 LYEMMDKGLKPNFSVFNKVRKCLEK 436
EM+ G++P+ S F + L K
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMK 799
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ K G + A K M G P T+N ++ NG+ E +++T+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM- 359
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K H P YNILISL K+ + A + ++ G++P +++ ++ ++ E
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 372 EAH 374
EA
Sbjct: 420 EAE 422
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YNV M+++ ++ + EM + G + D TY+ +++C + + +A + E +
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
K +P E Y+ ++ + K G+ + ++ G +P + + + K + E G Y
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDY- 307
Query: 372 EAHEYVVGSASKQSYSSN-ANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+ YV+ N Y+ L + G LA+ + EM++ GL PN
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN 360
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ + R++ G ++ A + K M+ +G++PD TY+ LV LCK + EA VL+ +E
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P + ILI CK+ + D A + KG + +I + K+E
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 372 EAHEY---VVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
A + +V +A+ + + S + L +KK L L +MM K P ++
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALD---LLQMMKKQNYPAYA 546
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 317 PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEY 376
P YN +I CK + D A++ LD + KG P ++T + +I Y + + + E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 377 VVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRKCLEK 436
+ ++ Y+ L + G++ AQ +L EM+ G+ P++ F+ + L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 437 KNEI 440
K E+
Sbjct: 128 KKEL 131
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
++ Y+ L+ K+ E ++K+M ++G PD+ T LV K+G F A + E
Sbjct: 384 ISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFE 443
Query: 309 TVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ K +GL P E Y +I G+ L + + ++ K ++ + A++++Y ++
Sbjct: 444 NL-KSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQM 502
Query: 368 GKYEEAHEYVVGSASKQSYSSNA-----NYSLLATLHLKKGNMLLAQKILYEMMDKGLKP 422
G A G +S Y+S+ YSL + K G + A+ EM G KP
Sbjct: 503 GDANGA----AGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKP 558
Query: 423 N 423
+
Sbjct: 559 D 559
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 250 NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET 309
+ Y+ ++ K G+ + L EMK+ G P + YN LV L + F EA ++++
Sbjct: 295 DSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKK 354
Query: 310 VEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILT-HAAVIKSYFE-- 366
+ ++ P YN +I LC+ G+ D+AR L + + + P + T HA + FE
Sbjct: 355 LNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKT 414
Query: 367 -----------LGKYEEAHEYVVGSASKQSYSSN--------------ANYSL-LATLH- 399
LG EE ++G K N AN +L LAT+
Sbjct: 415 LEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQG 474
Query: 400 -LKKGNMLLAQKILYEMMDKGLKPN 423
L G + A++I EM KG N
Sbjct: 475 LLSCGWLEKAREIYSEMKSKGFVGN 499
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 249 VNHYNVLMRAVCK-KGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL 307
V +NV++ C D A + +EM P+ +Y+ ++SC K G ++ ++
Sbjct: 258 VEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLY 317
Query: 308 ETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
+ ++K P YN L+ +L + FD A K + K+ +G++P +T+ ++I+ E
Sbjct: 318 DEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEA 377
Query: 368 GKYEEAHEYVVGSASKQ-SYSSNANYSLLATLHLKKGNMLLAQ 409
GK + A + S+ S + + ++ L ++ +K +L Q
Sbjct: 378 GKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQ 420
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 244 KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
K R+V YNV M+ K D E++ L EM G PD T+ ++SC +N
Sbjct: 170 KPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQN------ 223
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKS 363
G+PK A ++ +K++ G EP +T AA+I +
Sbjct: 224 -----------GVPKR------------------AVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 364 YFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
Y G + A + +++ +S L ++ GN I EM G+KPN
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPN 314
Query: 424 FSVFNKV 430
++N++
Sbjct: 315 LVIYNRL 321
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ ++ + + + + K MK G D+ TYN+++ C + AC ++ +
Sbjct: 560 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 619
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFE 366
+D PK + L+ +L F+ A LD+ L+ I +L++ +++ FE
Sbjct: 620 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFE 674
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 35/190 (18%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++ +CK G ++ AG + + SG PD+ TYN+++ + A ++ +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFL--------------------DKITL---- 347
+ +P YN +I LCK + ARK D + L
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 348 --KGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANY-----SLLATLHL 400
+GI ++T+ +I + ++G + A + S YSS+ + L + L
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
Query: 401 KKGNMLLAQK 410
+K +L QK
Sbjct: 193 RKAVAMLLQK 202
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++R + ++A L EM++ PD TY+ L++ + G++ A +++ +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI+ G + A + K+T G+ P ++TH V+ +Y +Y
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 372 EAHEY 376
+A Y
Sbjct: 266 KALSY 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN + + + E+A L + M++ D T+ +L+S C+ K+ EA L+ +E
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 312 KDHGLPKEFNYNILISLLC---KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
D +P + S+LC K GQ A +++ + G EP ++ + +++ +Y
Sbjct: 558 -DLSIP--LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 614
Query: 369 KYEEAHE 375
K+ +A E
Sbjct: 615 KWGKACE 621
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM--KRSGFDPDMTTYNLLVSCLCKNGKF 300
K R +N+++ + K G +A L M KR+ PD+ T+ ++ G+
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 301 AEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
V E + + P +YN L+ HG A L I GI P ++++ +
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 361 IKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
+ SY + +A E + ++ + Y+ L + G + A +I +M G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 421 KPN-FSVFNKVRKCLEKKNEI 440
KPN SV + C K ++
Sbjct: 457 KPNVVSVCTLLAACSRSKKKV 477
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN+++R + ++A L EM++ PD TY+ L++ + G++ A +++ +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P YN LI+ G + A + K+T G+ P ++TH V+ +Y +Y
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 372 EAHEY 376
+A Y
Sbjct: 134 KALSY 138
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN + + + E+A L + M++ D T+ +L+S C+ K+ EA L+ +E
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 312 KDHGLPKEFNYNILISLLC---KHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
D +P + S+LC K GQ A +++ + G EP ++ + +++ +Y
Sbjct: 426 -DLSIP--LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 482
Query: 369 KYEEAHE 375
K+ +A E
Sbjct: 483 KWGKACE 489
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 243 GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEM--KRSGFDPDMTTYNLLVSCLCKNGKF 300
K R +N+++ + K G +A L M KR+ PD+ T+ ++ G+
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 301 AEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAV 360
V E + + P +YN L+ HG A L I GI P ++++ +
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 361 IKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGL 420
+ SY + +A E + ++ + Y+ L + G + A +I +M G+
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 421 KPN-FSVFNKVRKCLEKKNEI 440
KPN SV + C K ++
Sbjct: 325 KPNVVSVCTLLAACSRSKKKV 345
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLET-VEKD 313
++ A + G E A L E G DP T ++LV+ L GK EA + T +EK+
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 314 HGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEA 373
L YN LI + + G+ A + +++ G+ I T+ +I Y + ++A
Sbjct: 770 IELDT-VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 374 HEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
E + Y Y+ + + K G M A + EM KG+KP +N + K
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN ++ ++ KK + + L EM G P+ TY L+VS K G EA + ++
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P+E Y+ +ISL K G ++ A + + +GI P T A ++ Y++ Y
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 372 EA 373
+A
Sbjct: 381 KA 382
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y +++ + K+G E A EMK GF P+ TY+ ++S K G + +A + E +
Sbjct: 296 YTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+P + ++SL K + A + I + +I+ Y +LG +
Sbjct: 356 SQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFH 415
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMM 416
+A + + Y ++ +HL GN++ A ++ EMM
Sbjct: 416 DAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVI-EMM 459
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 116/266 (43%), Gaps = 9/266 (3%)
Query: 170 ILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEVGGLCQSSGI-RLLIEM 228
I + + + V ++ FG L+ D+ E + ++ E G+ ++ + L++
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL--VIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 229 FTFTGSFDIVEYVIGKDRRK-----VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
+ + + VE + + R K YN+LM A ++ + L++EM+ G +P+
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFL 342
+ +Y L+S + K ++ K GL P +Y LI G + A
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 343 DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKK 402
+++ +GI+P + T+ +V+ ++ G + E ++ + Y+ L K+
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 403 GNMLLAQKILYEMMDKGLKPNFSVFN 428
G + A+ ++ E GL+P+ +N
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYN 594
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 283 DMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQ-FDLARKF 341
D+ YN +S L + ++ +A +V E ++K + P ILI+ L K G+ +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
+K++ KG++ ++KS+ + G EEA K S+ Y+ L + K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 402 KGNMLLAQKILYEMMDKGLKPNFSVFN 428
++ + + EM DKGLKP+ + +N
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYN 418
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 255 LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDH 314
L+++ C +G E A + EM++ G + YN L+ K+ E + L T +D
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE-VEGLFTEMRDK 408
Query: 315 GL-PKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE- 372
GL P YNIL+ + Q D+ L ++ G+EP + ++ +I +Y K +
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 468
Query: 373 AHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVRK 432
A + + S+ +Y+ L + G A EM +G+KP+ + V
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 433 CLEKKNEIG 441
+ + G
Sbjct: 529 AFRRSGDTG 537
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 9/210 (4%)
Query: 228 MFTFTGSFDIVEYVI--------GKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
+FT G + +Y++ ++ R V YN + + Y+ A + + M +
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKIN 303
Query: 280 FDPDMTTYNLLVSCLCKNGKFA-EACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
PD T +L++ L K G+ A E ++ E + + + + L+ C G + A
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
++ KGI + + ++ +Y + EE K S A Y++L
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ ++ + + +L EM D GL+PN +
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 81/186 (43%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ A G +E+A +EM + G P + TY ++ ++G + ++ + +
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
++ YN L+ K G + AR + + + G++P ++T+ ++ +Y G+
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFNKVR 431
+ + + A+ + YS + ++ + A M+ G P+ + K+R
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLR 667
Query: 432 KCLEKK 437
LE K
Sbjct: 668 AILEDK 673
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 225 LIEMFTFTGSFDIVEYVIGK-DRRKVNHYNVLMRAVCKKG-DYERAGFLVKEMKRSGFDP 282
L+EM+ TGS D+ V K D + + +N ++ + + E + + P
Sbjct: 376 LMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKP 435
Query: 283 D-MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARK 340
D +T +LV+C C G E Q+ ++EK HG+ P +Y +I LLC+ G + A+
Sbjct: 436 DRVTLMGILVAC-CYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHL 400
DKI EP ++ + +LG A E V + + S+ Y +L ++
Sbjct: 495 IADKIPF---EPSSHIWEPILCASLDLGDTRLA-ETVAKTMLESEPKSSFPYLVLIKIYE 550
Query: 401 KKGNMLLAQKILYEMMDKGLK 421
+ K+ Y M + LK
Sbjct: 551 MTWRWENSVKLRYAMNEHKLK 571
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Query: 77 GRPYASAKQVSEIVALIREGVNDLEFSLNRVNVSLSMALIVEIFHILASERVSALQFFHW 136
G P A ++ +S+ F+L+ +++ + LI++ ++ +AL F W
Sbjct: 85 GNPDAESQTISQ------------RFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEW 132
Query: 137 LKGSHPELCCDPQIXXXXXXXXXXXXXYEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDK 196
L S+ + ++ M+ I++++ A G L +D+
Sbjct: 133 L-DSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGI-------AGGKTLESAIDR 184
Query: 197 ASTVECVRKIMDVL----NEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIGKDRRKV--- 249
+++ D N+ G + L+++ G I E ++ ++
Sbjct: 185 LVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPD 244
Query: 250 -NHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
N ++L+ C + A L EM R GF+ YN+++ C+CK + + ++
Sbjct: 245 ENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQP 304
Query: 309 TVEKD------HGLPKEF-NYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVI 361
VEK G+P+ +N+LI+ LCK + + A ++ G +P T+ +I
Sbjct: 305 EVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLI 364
Query: 362 KSYFELGKYEEAHEYV 377
+S ++ + E E +
Sbjct: 365 RSLYQAARIGEGDEMI 380
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 81/177 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM + + G A + M+ G +PD +YN++V + G ++A V E ++
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P ++ +L+S K + +++ G+EP +++ Y LG++
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + + + + + Y++L ++ K G + +++ E+ +K +P+ +
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ A ++G E+A + ++++ G +PD+ YN L+ + G A ++ ++
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +YNI++ + G A +++ GI P + +H ++ +Y +
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHL--KKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ E +V S+ + + L + L+L + G +KIL EM + + S +N
Sbjct: 444 KC-EAIVKEMSENGVEPD-TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+ A +K Y+ A L ++ S + P TY LL+ C G A VL ++
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 312 KDHGLPKEFN---YNILI-SLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
H PK YN I L+ + G + A ++ +P T+ +I Y +
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
K + + S Q + Y+ L ++G A++I ++ + GL+P+ V+
Sbjct: 300 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 359
Query: 428 N 428
N
Sbjct: 360 N 360
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 70/149 (46%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
G PD+TT+N+L+ K G + + C V++ +EK YNI+I K G+ +
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATL 398
K+ +G++P +T+ +++ +Y + G + + + ++ +
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINA 435
Query: 399 HLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
+ + G++ +++ +M ++ KP+ F
Sbjct: 436 YGQAGDLATMKELYIQMEERKCKPDKITF 464
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 260 CKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK-DHGLPK 318
CK+ D +A L + M G P + Y L+S K+ +A LE ++ P
Sbjct: 157 CKQPD--QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPD 214
Query: 319 EFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEE 372
F + +LIS CK G+FDL + + +++ G+ +T+ +I Y + G +EE
Sbjct: 215 VFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 16/220 (7%)
Query: 219 SSGIRLLIEMFT-----------FTGSFDIVEYV--IGKDRRKVNHYNVLMRAVCKKGDY 265
S G++ I+++T +F +EY+ + + V + VL+ CK G +
Sbjct: 172 SEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 231
Query: 266 ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL-ETVEKDHGLPKEFNYNI 324
+ +V EM G TYN ++ K G F E VL + +E LP N
Sbjct: 232 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 291
Query: 325 LISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQ 384
+I + + L G++P I T +I S+ + G Y++ V+ K+
Sbjct: 292 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCS-VMDFMEKR 350
Query: 385 SYS-SNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN 423
+S + Y+++ K G + + +M +G+KPN
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 225 LIEMFTFTGSFDI-VEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
LI+M+ G+ +I +E G RR + +N ++ + G A L EMK SG PD
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 284 MTTYNLLVSCLCKN-GKFAEACQVLETVEKDHGLPKEFNY-NILISLLCKHGQFDLARKF 341
T+ + V C CK+ G + ++ D + E + ++ LL + G A +F
Sbjct: 290 KVTF-VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEF 348
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
++K+ +K T K Y ++ E A E ++ K + AN+ +L+ ++
Sbjct: 349 INKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI----KLEPRNPANFVMLSNIYGD 404
Query: 402 KGNMLLAQKILYEMMDKGLKPNFSV 426
G A ++ M D G K V
Sbjct: 405 AGRFDDAARLKVAMRDTGFKKEAGV 429
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 81/177 (45%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
YN LM + + G A + M+ G +PD +YN++V + G ++A V E ++
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+ P ++ +L+S K + +++ G+EP +++ Y LG++
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ + + + + + Y++L ++ K G + +++ E+ +K +P+ +
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L+ A ++G E+A + ++++ G +PD+ YN L+ + G A ++ ++
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
P +YNI++ + G A +++ GI P + +H ++ +Y +
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHL--KKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ E +V S+ + + L + L+L + G +KIL EM + + S +N
Sbjct: 422 KC-EAIVKEMSENGVEPD-TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+N+L+ A +K Y+ A L ++ S + P TY LL+ C G A VL ++
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 312 KDHGLPKEFN---YNILI-SLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFEL 367
H PK YN I L+ + G + A ++ +P T+ +I Y +
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 368 GKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
K + + S Q + Y+ L ++G A++I ++ + GL+P+ V+
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337
Query: 428 N 428
N
Sbjct: 338 N 338
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 253 NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEK 312
N ++ A + ++ ++KEMK PD+ TYN ++ L + G E VL T+++
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 313 DHGLPKE-FNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
D + YN +++ + K +FD+ +++ GIEP +L++ AVI S G +
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 372 EA 373
E+
Sbjct: 301 ES 302
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 135/328 (41%), Gaps = 28/328 (8%)
Query: 67 FSSYPCSSFKGRPYASAKQVSEIVA--LIREG-VNDLEFSLNRVNVSLSMALIVEIFHIL 123
++S FK P Q EI+A LIREG V ++E L + + IF L
Sbjct: 135 WASVQYQGFKHLP-----QACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDL 189
Query: 124 ASERVS------ALQFFHWL--KGSHPELCCDPQIXXXXXXXXXXXXXYEA---MVPILN 172
+ V A+ F W+ KG P C + Y V
Sbjct: 190 IGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRA 249
Query: 173 EFNHRRVHLGRNAFGFLL-VLNLDKASTVECVRKIMDVLNEVGGLCQSSGIRLLIEMFTF 231
E NH + ++ G ++ +L LD+ V+ R + L +G + SS + +
Sbjct: 250 ELNHMNI----DSIGKVIELLCLDQ--KVQEARVLARKLVALGCILNSSIYSKITIGYNE 303
Query: 232 TGSFDIVEYVIGKDRRKVNHY--NVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNL 289
F+ + IG+ + + + + N ++ ++C++ ERA ++E++ GF D T+ +
Sbjct: 304 KQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGI 363
Query: 290 LVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG 349
L+ C G A L + P ++YN ++S L + G + LD++ G
Sbjct: 364 LIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENG 423
Query: 350 IEPCILTHAAVIKSYFELGKYEEAHEYV 377
+ + T ++ Y + ++EEA V
Sbjct: 424 MMLSLSTFKIMVTGYCKARQFEEAKRIV 451
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 54/94 (57%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
+ +L+ C +GD +RA + E+ G+ PD+ +YN ++S L + G + +L+ ++
Sbjct: 361 FGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMK 420
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKI 345
++ + + I+++ CK QF+ A++ ++K+
Sbjct: 421 ENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM 454
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
V N+L+ + GD EM + GF P+ TY + + CK F EA ++ E
Sbjct: 210 VKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFD---LARKFLDKITLKGIEPCILTHAAVIKSYF 365
+++ L + IL +L+ G AR+ D+I+ +G+ P
Sbjct: 270 DMDR---LDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTP------------- 313
Query: 366 ELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFS 425
+ G Y +L+++L +K G++ A K++ EM +KG++P+
Sbjct: 314 DCGAYN---------------------ALMSSL-MKCGDVSGAIKVMKEMEEKGIEPDSV 351
Query: 426 VFNKVRKCLEKKNEIG 441
F+ + + K E G
Sbjct: 352 TFHSMFIGMMKSKEFG 367
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 239 EYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNG 298
+ + K R V Y ++ A+ KKG +A L + M + +PD+ N ++ LC
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 299 KFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKG--IEPCILT 356
+ EA +V + + P YN L+ LCK + + + ++++ LKG P +T
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 357 HAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN-YSLLATLHLKKGNMLLAQKILYEM 415
+ ++K + + + V+ +K ++ Y+L+ L+++ ++I EM
Sbjct: 392 FSYLLK----YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 416 MDKGLKPNFSVFNKVRKCLEKKNEIG 441
GL P+ + L K +IG
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIG 473
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 164 YEAMVPILNEFNHRRVHLGRNAFGFLLVLNLDKASTVECVRKIMDVLNEV---GGLCQSS 220
+E +L+E R LG +AF F +L+ + V +RK + ++V G C
Sbjct: 455 FEQAFKLLSEITER--ELGVSAFTFASLLS--GVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 221 GIRLLIEMFTFTGSFDIVEYVIG-KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSG 279
LI M++ GS D V + R V + ++ K G R +M G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 280 FDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLA 338
P+ TY ++S G +E + ++ +DH + PK +Y ++ LLC+ G A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 339 RKFLDKITLKGIEPCILT--HAAVIKSYFELGK 369
+F++ + + T A + S ELGK
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 225 LIEMFTFTGSFDIVEYVIGK-DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
LI++++ G V + +R V+ YN ++R + G + L K + G PD
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 284 MTTYNLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKFL 342
T+ + +S +G E Q+ +++ +G+ PK +Y L+ LL + G+ + A + +
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 343 DKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLKK 402
K+ +K + +++ + + E A ++++G + ++ NY LL+ ++
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG----LEFENSGNYVLLSNIYAGV 432
Query: 403 GNMLLAQKILYEMMDKGLK--PNFSVFN 428
+K M D + P S N
Sbjct: 433 NRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 196 KASTVECVRKIMDVL-----NEVGGLCQSSGIRLLIEMFTFTGSF-DIVEYVIGKDRRKV 249
K VE RK+M L NE +++ L++ G F DI E I ++
Sbjct: 244 KMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFE--IAENMSLC 301
Query: 250 NHYNV------LMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
NV ++ ++C+ A +V MK G P T+YN ++ LCK+G A
Sbjct: 302 ESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRA 361
Query: 304 CQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLD 343
Q+LE + P E+ Y +L+ LCK AR L+
Sbjct: 362 YQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 65/166 (39%), Gaps = 38/166 (22%)
Query: 244 KDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEA 303
K RR YN ++ +CK G RA L++E F P TY LL+ LCK +A
Sbjct: 339 KPRR--TSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 304 CQVLETVEKDHGL-----------------------------------PKEFNYNILISL 328
VLE + + G P E+ N +I+
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 329 LCKHGQFDLARKFLDK-ITLKGIEPCILTHAAVIKSYFELGKYEEA 373
LCK G+ D A K LD +T K P +T V+ G+ EEA
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEA 502
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 19/231 (8%)
Query: 213 VGGLCQ----SSGIRLLIEMFTFTGSFDIVEYVIGKDRRKVNHYNVLMRAVCKKGDYERA 268
+ GLC+ +++L +M T G F + V N +M + +G E A
Sbjct: 454 INGLCKMGRVDDAMKVLDDMMT--GKFCAPDAVT---------LNTVMCGLLAQGRAEEA 502
Query: 269 -GFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILIS 327
L + M + P + YN ++ L K K EA V +EK Y I+I
Sbjct: 503 LDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIID 562
Query: 328 LLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYS 387
LC + D+A+KF D + +AA +K + G +A ++ A +
Sbjct: 563 GLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIP 622
Query: 388 SNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPN---FSVFNKVRKCLE 435
+ Y+ + + G A +IL EM G P+ + + +K+ ++
Sbjct: 623 NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMD 673
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 225 LIEMFTFTGSFDIVEYVIGK-DRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
L+E + GS V+ V + R V ++ L+ A GD E A +EM+ + PD
Sbjct: 223 LVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD 282
Query: 284 MTTY-NLLVSCLCKNGKFAEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKF 341
+ N+L +C G EA + ++ D+GL + +Y+ L+ +L + G+F+ A K
Sbjct: 283 DIAFLNVLKAC-SHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
+ + K P T A++ + G+ E A E + ANY LL +++
Sbjct: 342 IQAMPEK---PTAKTWGALLGACRNYGEIELA-EIAARELLMVEPENPANYVLLGKIYMS 397
Query: 402 KGNMLLAQKILYEMMDKGLK 421
G A+++ +M + G+K
Sbjct: 398 VGRQEEAERLRLKMKESGVK 417
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKE-------MKRSGFDPDMTTYNLLVSCLCKNGKFAEAC 304
+N L+ +C++ LV E M+ P +YN+L+SCL + + E+C
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305
Query: 305 QVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEP 352
Q+LE +++ P +Y ++ +L G+F + +D++ +G P
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVL-ETV 310
YN+L+ + + + ++++MKRSG DPD +Y +V L G+F + Q++ E +
Sbjct: 288 YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
E+ ++F Y+ LI +LC + + A + +K+ + + +I + G +
Sbjct: 348 ERGFRPERKFYYD-LIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNF 406
Query: 371 EEAHE 375
E+ E
Sbjct: 407 EKGRE 411
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y L++ G + A ++ +++ G PD+ NL++ + G+F EA +V ++E
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE 344
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLA 338
K +P ++ + ++S LC G+FDL
Sbjct: 345 KRKLVPDQYTFASILSSLCLSGKFDLV 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 249 VNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLE 308
VN +++L+ + G+ ++A L +M + G P++ TY L+ G EA VL
Sbjct: 247 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Query: 309 TVEKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELG 368
V+ + P N++I + G+F+ ARK + + + P T A+++ S G
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 369 KYE 371
K++
Sbjct: 367 KFD 369
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y+ L+ +C +G A L+ EMK GF P+ +YN LV+ +G+ +A + L +
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGI 350
++ + +Y L+ C+ G++D A + L+ + K +
Sbjct: 387 ENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 279 GFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLA 338
GF D TY ++ + G+ V +++ L Y LI + G D A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 339 RKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNAN-YSLLAT 397
+ +++ G EP ++++ A +K F G+ EEA E V + S N + Y++L
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATE-VYKEMLRSRVSPNCHTYTVLME 235
Query: 398 LHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
+ G A I ++M + G++P+ + N
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACN 266
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 211 NEVGGLCQSSGIRLLIEMFTFTGSFDIVEYVIG--KDRRKVNH---YNVLMRAVCKKGDY 265
N L + L ++ + F +E +I K+ K+ + L+R+ + +
Sbjct: 59 NSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMF 118
Query: 266 ERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHG--LPKEFNYN 323
+ A + +EM + G + ++N L++ + F Q+ + + + P + +Y
Sbjct: 119 DHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYG 178
Query: 324 ILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASK 383
+LI C G+ + A + + + +KG+E I+ ++ S ++ G +EA + +K
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 384 QSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNFSVFN 428
N Y+ + ++ K + ++++ EM GLKP+ +N
Sbjct: 239 GCDLDNTVYN-VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYN 282
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKEMKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETVE 311
Y + + + K GD++ A + K+MK PD ++ L+ EA +L+ +
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 312 KDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKYE 371
+Y+ L+ C + A + +KI + P I T A+I + E +
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 372 EAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+A EY+ + + YS+L +K + ++ K+L + G+ PN
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 225 LIEMFTFTGSFDI-VEYVIGKDRRKVNHYNVLMRAVCKKGDYERAGFLVKEMKRSGFDPD 283
L++M+ G + +E R + L+ + G RA L EM+ G D
Sbjct: 320 LVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLD 379
Query: 284 MTTYNLLVSCLCKNGKF-AEACQVLETVEKDHGL-PKEFNYNILISLLCKHGQFDLARKF 341
T+ + V C +G F AE ++ ++ + H + PK + + LI LLC+ G D A +
Sbjct: 380 AITF-VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEEL 438
Query: 342 LDKITLKGIEPCILTHAAVIKSYFELGKYEEAHEYVVGSASKQSYSSNANYSLLATLHLK 401
+DK+ + E + + +++ + G + A E V K S ++ ++LLA+++
Sbjct: 439 IDKMRGESDETLVPVYCSLLSAARNYGNVKIA-ERVAEKLEKVEVSDSSAHTLLASVYAS 497
Query: 402 KGNMLLAQKILYEMMDKGLK 421
+ +M D G++
Sbjct: 498 ANRWEDVTNVRRKMKDLGIR 517
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 252 YNVLMRAVCKKGDYERAGFLVKE-MKRSGFDPDMTTYNLLVSCLCKNGKFAEACQVLETV 310
YN ++ A C +G+ + A + + + + F P TY L L + G+ +A +L +
Sbjct: 219 YNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREM 278
Query: 311 EKDHGLPKEFNYNILISLLCKHGQFDLARKFLDKITLKGIEPCILTHAAVIKSYFELGKY 370
YN LI G FD A +F D++ K + +A ++ +FE G
Sbjct: 279 LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGND 338
Query: 371 EEAHEYVVGSASKQSYSSNANYSLLATLHLKKGNMLLAQKILYEMMDKGLKPNF 424
+EA E K+ ++L + LK G A + EM+D PN
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNI 392
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 225 LIEMFTFTGSFDIVEYVIGKDRRKVN----HYNVLMRAVCKKGDYERAGFLVKEMKRSGF 280
++ M+ G F+ V +I + + + + YN+ + A D E A + + K
Sbjct: 203 MLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKL 262
Query: 281 DPDMTTYNLLVSCLCKNGKFAEACQVLETVEKDHGLPKEFNYNILISLLCKHGQFDLARK 340
+PD TY++L + K +A L+ +EK Y LISL G D
Sbjct: 263 NPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNL 322
Query: 341 FLDKITLKGIEPCILTHAAVIKSYFELGKYEEAH----EYVVGSASKQSYSSNANYSLLA 396
K+ + + ++I + +LG++E+A E+ S + + N L+
Sbjct: 323 TWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPN----LIL 378
Query: 397 TLHLKKGNMLLAQKILYEMMDKGLKPNFSVF 427
++ + +LL +K +++KG+ P++S +
Sbjct: 379 AEYMNRDEVLLGEKFYERIVEKGINPSYSTW 409