Miyakogusa Predicted Gene

Lj0g3v0285299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0285299.1 tr|F6F0M0|F6F0M0_SPHCR Glycosyl transferase
family 2 OS=Sphingobium chlorophenolicum L-1
GN=Sphch_26,31.48,0.0000000000002,Nucleotide-diphospho-sugar
transferases,NULL; Glyco_transf_92,Domain of unknown function DUF23;
seg,,CUFF.19044.1
         (504 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27200.1 | Symbols:  | Domain of unknown function (DUF23) | c...   377   e-104
AT3G27330.1 | Symbols:  | zinc finger (C3HC4-type RING finger) f...   277   2e-74
AT5G40720.1 | Symbols:  | Domain of unknown function (DUF23) | c...   272   4e-73
AT4G37420.1 | Symbols:  | Domain of unknown function (DUF23) | c...   176   4e-44
AT5G44670.1 | Symbols:  | Domain of unknown function (DUF23) | c...    55   1e-07

>AT1G27200.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr1:9449812-9451539 REVERSE LENGTH=575
          Length = 575

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/392 (49%), Positives = 257/392 (65%), Gaps = 36/392 (9%)

Query: 118 FTLQHRILFPDHYLIFLANQQKNQPHELDCVYYTLLPNGSATGSHEXXXXXXXXXXXXST 177
            +++ R+ FPDH L+ L++        L CVY  +        S              S+
Sbjct: 84  LSVEDRVQFPDHLLLILSHGIGKGEKNLVCVYRGVKEETLVLPS-------------ISS 130

Query: 178 DRYDESRSAA-------GGSVVVDLRRRGEVGRRSLGFLTNRTAQSWDRVAYEARLDGDT 230
           D +DE RS           S  VDL+ RG++ ++ +    +R   +W++V YEA +DGDT
Sbjct: 131 DEFDEFRSIVRCPNAPLNYSSSVDLQFRGDLVKKKMK-KQSRRVHNWEKVGYEAVIDGDT 189

Query: 231 VVVFVKGLNLRPHKISDPTHFRCHFGVRNFHKDGSFLLSTRAVSVAQEVVRCLLPESIRS 290
           VVVFVKGL  RPHK SDP++++C F + N  +       T+A++ AQEVVRC LPES++ 
Sbjct: 190 VVVFVKGLTRRPHKESDPSYYKCQFEIENSEEKEV----TQAIAAAQEVVRCGLPESLKL 245

Query: 291 NPGKARGIRVTVSHLSGNVRHPVRALVPSVARIAGSDGVQRRRKD---KYELCVCTMVWN 347
           NP      RV+V H+  + R      +PSVARI GSD ++++ K    K+ELCVCTM+WN
Sbjct: 246 NPEMM--FRVSVIHI--DPRGRTTPALPSVARIYGSDSIEKKEKKSGVKHELCVCTMLWN 301

Query: 348 QASALREWIMYHAWLGVERWFIYDNNSDDDVEKVIQDLDLQGYNVSRQAWPWIKTQEAGF 407
           QA  LREWIMYH+WLGVERWFIYDNNSDD +++ I+ L  + YNVSR  WPWIKTQEAGF
Sbjct: 302 QAPFLREWIMYHSWLGVERWFIYDNNSDDGIQEEIELLSSENYNVSRHVWPWIKTQEAGF 361

Query: 408 SHCALRAREECKWVGFFDVDEFFYFPREFHRQIRQGVPGENSLRSVVANYSNSKSIAEIR 467
           SHCA+RA+EEC WVGFFDVDEF+YFP   HR   QG+P +N+L+S+V+NY++   + EIR
Sbjct: 362 SHCAVRAKEECNWVGFFDVDEFYYFPT--HRS--QGLPSKNALKSLVSNYTSWDLVGEIR 417

Query: 468 TACHSFGPSGLNSAPKQGVTTGYTCRLQSPER 499
           T CHS+GPSGL S P QGVT GYTCR  +PER
Sbjct: 418 TDCHSYGPSGLTSVPSQGVTVGYTCRQANPER 449


>AT3G27330.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
           family protein | chr3:10116950-10120516 REVERSE
           LENGTH=913
          Length = 913

 Score =  277 bits (708), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/290 (47%), Positives = 189/290 (65%), Gaps = 34/290 (11%)

Query: 217 WDRVAYEARLDGD-TVVVFVKGLNLRPHKISDPTHFRCHFGVRNFHKDGSFLLSTRAVSV 275
           +D + Y+A +D D + VVFVKGLNLRP +++D + + C +G  +F K    L+ +  ++ 
Sbjct: 166 YDWLVYDAVIDYDNSTVVFVKGLNLRPGRVADVSRYECVYGW-DFAKHNR-LIRSDVITA 223

Query: 276 AQEVVRCLLPESIRSNPGKARG-IRVTVSHLSG-----NVRHPVRALVPSVARIAGSDGV 329
           AQE+VRC  P ++   P  ARG ++V+V    G     ++  PVR + P           
Sbjct: 224 AQEIVRCRTPLAVLDGPKAARGPVKVSVRIKGGTGMLPSIAQPVRIINPP---------- 273

Query: 330 QRRRKDKYELCVCTMVWNQASALREWIMYHAWLGVERWFIYDNNSDDDVEKVIQDLDLQG 389
              RK  +++CVCTM  N A+ LREW+MYHA +GV+RWFIYDNNSDDD+   I++L+ +G
Sbjct: 274 ---RKKPFQMCVCTMTRNAAAVLREWVMYHAGIGVQRWFIYDNNSDDDIIAEIENLERRG 330

Query: 390 YNVSRQAWPWIKTQEAGFSHCALRAREECKWVGFFDVDEFFYFPREFHRQIRQGVPGENS 449
           YN+SR  WPWIKTQEAGFS+CA+RA+ +C W+ F DVDEFFY            +P   +
Sbjct: 331 YNISRHFWPWIKTQEAGFSNCAIRAKSDCDWIAFIDVDEFFY------------IPSGET 378

Query: 450 LRSVVANYSNSKSIAEIRTACHSFGPSGLNSAPKQGVTTGYTCRLQSPER 499
           L SV+ NY+ + SI EIRT CHSFGPSGL S P+ GVT+GYTCR+  PER
Sbjct: 379 LTSVIRNYTTTDSIGEIRTPCHSFGPSGLRSRPRSGVTSGYTCRVVLPER 428


>AT5G40720.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr5:16298063-16299893 FORWARD LENGTH=583
          Length = 583

 Score =  272 bits (696), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 224/392 (57%), Gaps = 40/392 (10%)

Query: 118 FTLQHRILFPDHYLIFLANQQKNQ---PHELDCVYYTLLPNGSATGSHEXXXXXXXXXXX 174
            T+   + FPD  LIFL     ++     +L CV+  +  N S+    E           
Sbjct: 68  ITIHEAVEFPDQTLIFLKYPPSSRFFTKEDLFCVFSDV--NDSSKLFKELPFAV------ 119

Query: 175 XSTDRYDES--RSAA---GGSVVVDLRR-RGEVGRRSLGFLTNRTAQSWDRVAYEARLDG 228
             TD Y     R +A   G +V + + R R +     +G LT+R    WD + Y+A +D 
Sbjct: 120 -ETDDYGRQIVRCSAVPRGNTVSLAVSRWRVDDYNLQVG-LTHR----WDWLVYDAVIDD 173

Query: 229 D-TVVVFVKGLNLRPHKISDPTHFRCHFGVRNFHKDGSFLLSTRAVSVAQEVVRCLLPES 287
           D + VVFVKGLNLRP K++D + + C +G  +F K    LL  +A+S AQE+VRC  P +
Sbjct: 174 DNSTVVFVKGLNLRPGKVADASRYECVYG-WDFTKP-KLLLRAQAISAAQEIVRCKTPLT 231

Query: 288 IRSNPGKARGIRVTVSHLSGNVRHPVRALVPSVARIAGSDGVQRRRKDKYELCVCTMVWN 347
           +   P +A+   V VS     VR     ++PSVA      G  +  K  +E CVCTM  N
Sbjct: 232 VLDGPRRAQSQPVKVS-----VRIKGSGMLPSVAHPIKRPGRIKVSK-TFETCVCTMTRN 285

Query: 348 QASALREWIMYHAWLGVERWFIYDNNSDDDVEKVIQDLDLQGYNVSRQAWPWIKTQEAGF 407
            A+ LREW+MYHA +GV+RWFIYDNNSDDD+   I++L+ +GYN+SR  WPWIKTQEAGF
Sbjct: 286 AANVLREWVMYHAGIGVQRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGF 345

Query: 408 SHCALRAREECKWVGFFDVDEFFYFPREFHRQIRQGVPGENSLRSVVANYSNSKSIAEIR 467
           ++CA+RA+ +C WV F DVDEFFY P         G    N +R+     S+S  I EIR
Sbjct: 346 ANCAIRAKSDCDWVAFIDVDEFFYIP--------SGQTLTNVIRNHTTTPSSSGEIGEIR 397

Query: 468 TACHSFGPSGLNSAPKQGVTTGYTCRLQSPER 499
           T CHSFGPSGL   P+ GVT  YTCR+  PER
Sbjct: 398 TPCHSFGPSGLRDPPRSGVTAAYTCRMALPER 429


>AT4G37420.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr4:17593123-17594889 FORWARD LENGTH=588
          Length = 588

 Score =  176 bits (446), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/283 (36%), Positives = 143/283 (50%), Gaps = 19/283 (6%)

Query: 217 WDRVAYEARLDGDTVVVFVKGLNLRPHKISDPTHFRCHFGVRNFHKDGSFLLSTRAVSVA 276
           W+ V +EA      VV+ VKG N        P  FRC FG     ++    + T   S  
Sbjct: 201 WNFVVFEAISTETDVVLLVKGPNRGLGSNKPPESFRCVFG-----EESDTAIRTAVTSSV 255

Query: 277 QEVVRCLLPESIRSNPGKARGIRVTVSHLSGNVRHPVRALVPSVARIAGSDGVQRRRKDK 336
           QEV RC LP      P K     V                VPSVA  +    +   R +K
Sbjct: 256 QEVFRCSLPNITIDTPVKIYLEAVATGKEETKT-------VPSVAYYSPKRTLVEPR-EK 307

Query: 337 YELCVCTMVWNQASALREWIMYHAWLGVERWFIYDNNSDDDVEKVIQDLDLQGYNVSRQA 396
             LC  TMV+N A  LREW+MYHA +G++R+ IYDN SDD++  V++ L+ + Y+V +  
Sbjct: 308 SLLCATTMVYNVAKYLREWVMYHAAIGIQRFIIYDNGSDDELNDVVKGLNSEKYDVIKVL 367

Query: 397 WPWIKTQEAGFSHCALRAREECKWVGFFDVDEFFYFPREFHRQIRQGVPGENSLRSVVAN 456
           W W KTQEAGFSH A+   + C W+ + DVDEF + P       +Q  P +  +RS++  
Sbjct: 368 WIWPKTQEAGFSHAAVYGNDTCTWMMYLDVDEFLFSP----AWDKQSQPSDQMIRSLLP- 422

Query: 457 YSNSKSIAEIRTACHSFGPSGLNSAPKQGVTTGYTCRLQSPER 499
            S+   I ++    H FGPS     P+ GVT GYTCR +  +R
Sbjct: 423 -SDQSMIGQVSFKSHEFGPSNQTKHPRGGVTQGYTCRREEDQR 464


>AT5G44670.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr5:18019209-18021266 REVERSE LENGTH=519
          Length = 519

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 91/224 (40%), Gaps = 27/224 (12%)

Query: 235 VKGLNLRP-HKISDPTHFRCHFGVRN-----FHKDGSFLLSTRAVS--VAQEVVRCLLPE 286
           V GL+ +P H  S PT +RC +   N        DG+ +L+           VV C  P 
Sbjct: 143 VIGLSSKPLHVYSHPT-YRCEWIPLNQSDNRILTDGTKILTDWGYGRVYTTVVVNCTFPS 201

Query: 287 SIRSNPGKARG---IRVTVSHLSGNVRH--PVRALVPSVARIAGSD-GVQRRRKDKYELC 340
           +   NP    G   +  T      N+    PV    P+    A  +  ++RR K  Y  C
Sbjct: 202 NTVINPKNTGGTLLLHATTGDTDRNITDSIPVLTETPNTVDFALYESNLRRREKYDYLYC 261

Query: 341 VCTMVWNQASA-LREWIMYHAWLGVERWFIYDNNSDDDVEKVIQDLDLQGYNVSRQAWPW 399
             ++  N +   +REWI YH     ER     +++    E+V + L      + R     
Sbjct: 262 GSSLYGNLSPQRIREWIAYHVRFFGERSHFVLHDAGGITEEVFEVLK-PWIELGRVTVHD 320

Query: 400 IKTQE--AGFSH--------CALRAREECKWVGFFDVDEFFYFP 433
           I+ QE   G+ H        C  R R   KW+ FFDVDEF Y P
Sbjct: 321 IREQERFDGYYHNQFMVVNDCLHRYRFMAKWMFFFDVDEFIYVP 364