Miyakogusa Predicted Gene

Lj0g3v0284979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284979.1 tr|B0BLI6|B0BLI6_LOTJA CM0216.400.nc protein
OS=Lotus japonicus GN=CM0216.400.nc PE=4
SV=1,58.97,0.00000000000001,Peptidase_C14,Peptidase C14, caspase
catalytic; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
,CUFF.19009.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 | chr1:2983398...    65   3e-11
AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 | chr1:2983668...    62   3e-10
AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 | chr1:2984284...    62   4e-10
AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 | chr1:5612304...    62   5e-10
AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5...    60   1e-09
AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893...    49   3e-06

>AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 |
           chr1:29833986-29835412 FORWARD LENGTH=403
          Length = 403

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 15/112 (13%)

Query: 2   RMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLVAYAKPGDILFIHLIAH 61
           RM K L+D  GF+E++IT++I+ + S T QPT  NIR  L +L+  AK GD+LF+H   H
Sbjct: 28  RMHKCLVDRFGFAEEDITVLIDTDESYT-QPTGKNIRQALSELIKPAKSGDVLFVHYSGH 86

Query: 62  GC-------------CEGTITSSDKQSIEDYFFRALIIIGVKNGCTMTFVSD 100
           G               +  I  SD   I D  FR L +  V  GC +T VSD
Sbjct: 87  GTRVPPETGEEDDTGFDECIVPSDLNPIPDDDFRDL-VEQVPEGCQITIVSD 137


>AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 |
           chr1:29836686-29837908 FORWARD LENGTH=368
          Length = 368

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 20/125 (16%)

Query: 2   RMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLVAYAKPGDILFIHLIAH 61
           RM+  L++  GFSE+NI ++I D  S +++PT  NIR  L  LV  AK GD+LF+H   H
Sbjct: 28  RMRISLVERYGFSEENIKMLI-DTDSSSIKPTGKNIRQALLDLVEPAKSGDVLFVHYSGH 86

Query: 62  GC-------------CEGTITSSDKQSIEDYFFRALIIIGVKNGCTMTFVSDC-----LI 103
           G               +  I  SD   I D  FR L+ + V   C +T +SD      LI
Sbjct: 87  GTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDLVDM-VPKDCPITIISDSCHSGGLI 145

Query: 104 EPAVE 108
           + A E
Sbjct: 146 DEAKE 150


>AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 |
           chr1:29842849-29844368 FORWARD LENGTH=418
          Length = 418

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 20/125 (16%)

Query: 2   RMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLVAYAKPGDILFIHLIAH 61
           RM K L++  GFSE+NIT++I+ + S T QPT  NIR  L  LV  A  GD+L +H   H
Sbjct: 28  RMYKCLVERYGFSEENITVLIDTDESST-QPTGKNIRRALADLVESADSGDVLVVHYSGH 86

Query: 62  GCCEGTITSSDKQS-------------IEDYFFRALIIIGVKNGCTMTFVSDC-----LI 103
           G      T  D  +             I D  FR L+   V  GC MT +SD      LI
Sbjct: 87  GTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDLVDK-VPPGCRMTIISDSCHSGGLI 145

Query: 104 EPAVE 108
           + A E
Sbjct: 146 DEAKE 150


>AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 |
           chr1:5612304-5613829 REVERSE LENGTH=381
          Length = 381

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 16/113 (14%)

Query: 2   RMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLVAYAKPGDILFIHLIAH 61
           RM+K LI+L GF+  +I +MI+ + SC +QPT  NI   L  L+A  + GD L  H   H
Sbjct: 28  RMQKCLIELYGFANKDIVIMIDTDKSC-IQPTGKNICDELDNLIASGQSGDFLVFHYSGH 86

Query: 62  GC--------------CEGTITSSDKQSIEDYFFRALIIIGVKNGCTMTFVSD 100
           G                +  IT  D   I+D  FR ++   VK GC +T +SD
Sbjct: 87  GTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFREMVSR-VKEGCQLTIISD 138


>AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5
          | chr1:29838722-29840137 FORWARD LENGTH=410
          Length = 410

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 2  RMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLVAYAKPGDILFIHLIAH 61
          R+ K L+D  GFSE NIT +I+ + S T +PT  NIR  L  LV  AKPGD+L +H   H
Sbjct: 28 RVHKSLVDRFGFSERNITELIDTDESST-KPTGKNIRRALLNLVESAKPGDVLVVHYSGH 86

Query: 62 G 62
          G
Sbjct: 87 G 87


>AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 |
           chr5:1153893-1154870 FORWARD LENGTH=325
          Length = 325

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 16/114 (14%)

Query: 1   MRMKKHLIDLGGFSEDNITLMIEDEPSCTLQPTEDNIRTMLYKLV--AYAKPGDILFIHL 58
           + MK+ ++   GF +D+I ++  DEP   ++PT  NI+  L ++V  A A  GDILF H 
Sbjct: 34  LAMKETILSRFGFKQDDIEVLT-DEPESKVKPTGANIKAALRRMVDKAQAGSGDILFFHY 92

Query: 59  IAHGCCEGTITSS------------DKQSIEDYFFRALIIIGVKNGCTMTFVSD 100
             HG    ++ S+            D   I D  FR L +  +  G + T +SD
Sbjct: 93  SGHGTRIPSVKSAHPFKQDEAIVPCDFNLITDVDFREL-VNQLPKGTSFTMISD 145