Miyakogusa Predicted Gene

Lj0g3v0284689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284689.1 Non Chatacterized Hit- tr|Q84N00|Q84N00_MEDTR
Putative class 5 chitinase OS=Medicago truncatula GN=c,33.68,1e-18,no
description,Glycoside hydrolase, catalytic domain; no
description,Chitinase II; (Trans)glycosidas,CUFF.18975.1
         (208 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19810.1 | Symbols:  | Glycosyl hydrolase family protein with...   176   9e-45
AT4G19820.1 | Symbols:  | Glycosyl hydrolase family protein with...   160   5e-40
AT4G19730.1 | Symbols:  | Glycosyl hydrolase superfamily protein...   155   2e-38
AT4G19720.1 | Symbols:  | Glycosyl hydrolase family protein with...   147   4e-36
AT4G19800.1 | Symbols:  | Glycosyl hydrolase family protein with...   145   1e-35
AT4G19760.1 | Symbols:  | Glycosyl hydrolase family protein with...   144   4e-35
AT4G19750.1 | Symbols:  | Glycosyl hydrolase family protein with...   140   5e-34
AT4G19770.1 | Symbols:  | Glycosyl hydrolase family protein with...    77   7e-15
AT4G19740.1 | Symbols:  | Glycosyl hydrolase superfamily protein...    67   9e-12

>AT4G19810.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10764151-10765753
           REVERSE LENGTH=379
          Length = 379

 Score =  176 bits (446), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 87/182 (47%), Positives = 121/182 (66%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           VKA Y++  SE   +DI ++LFTHL C+FA +N  T  V ++S+ + KFSTFT TV+ +N
Sbjct: 28  VKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRN 87

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSD 146
           PSV TLLSI GG  +   + SM +  + RKSFIDSSIR AR   F G+DL   +P   ++
Sbjct: 88  PSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATE 147

Query: 147 LINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLA 206
           + NFGTLL+EWR A+ +EA +S KP L+L  A +Y     S+ YP  ++  +LDWV+ +A
Sbjct: 148 MTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMA 207

Query: 207 YD 208
           YD
Sbjct: 208 YD 209


>AT4G19820.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10767436-10768614
           REVERSE LENGTH=366
          Length = 366

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 118/182 (64%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           VKA Y+++ SE   + I ++LFTHL C+FA IN  TY V ++S  + KFSTFT TV+ +N
Sbjct: 26  VKATYWFAESESPLAQIDSSLFTHLFCAFADINTLTYQVIVSSRNKPKFSTFTQTVRRRN 85

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSD 146
           P+V TLLSI G       F SM +  + RK FI SSI+ AR   F G+DL   +P   ++
Sbjct: 86  PTVKTLLSIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYPSITTE 145

Query: 147 LINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLA 206
           + NFG LL+EWR+A+ +EAR+S KP L+L  A +Y     S+ +P  ++  +LDWV+ +A
Sbjct: 146 MDNFGKLLREWRLAVEAEARSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVA 205

Query: 207 YD 208
           YD
Sbjct: 206 YD 207


>AT4G19730.1 | Symbols:  | Glycosyl hydrolase superfamily protein |
           chr4:10733864-10734975 REVERSE LENGTH=332
          Length = 332

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 115/187 (61%), Gaps = 5/187 (2%)

Query: 27  VKAGYYYSGSEI-----SASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNT 81
           VKA Y++   E      SA  I + LFTHL C+FA ++  ++ VF++ + E  FSTFT T
Sbjct: 14  VKASYWFPDGETQDPITSAETIPSALFTHLFCAFADLDANSHKVFVSQAHEFIFSTFTET 73

Query: 82  VKLQNPSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWP 141
           VK++NP V TLLSI G   N + F SM +    RK+FIDS I  AR   F G+DL   +P
Sbjct: 74  VKIRNPQVKTLLSIGGKNANNSAFASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYP 133

Query: 142 KQGSDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDW 201
               ++ +FG L+ E R A+ +E+R SSKP L+L  A YY    ++ +YP + M+ +LDW
Sbjct: 134 YSDHEMTDFGNLVGELRAAVEAESRRSSKPTLLLTAAVYYSSVYKTFTYPVQVMRESLDW 193

Query: 202 VHFLAYD 208
           V+ +AYD
Sbjct: 194 VNIIAYD 200


>AT4G19720.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10730363-10731695
           REVERSE LENGTH=363
          Length = 363

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 117/193 (60%), Gaps = 11/193 (5%)

Query: 27  VKAGYYY--------SGSEI---SASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKF 75
           VKA Y++        +GS +   SA  I +TLFTHL C+FA ++P T +V ++ + E +F
Sbjct: 6   VKASYWFPDGASSPTTGSVVPQSSAVLIDSTLFTHLFCAFADLDPQTNSVVVSGAHEQEF 65

Query: 76  STFTNTVKLQNPSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGID 135
           S FT  VK +NP V TLLSI G   + + F SM +  + RKSFI S+I +AR   F G+D
Sbjct: 66  SNFTKIVKKKNPHVQTLLSIGGRNADKSAFASMASNPTSRKSFIWSAISSARYYRFDGLD 125

Query: 136 LCGAWPKQGSDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESM 195
           L   +PK   ++ NFG LL++WR AI  +A  + +  L+L  A YY    +S+SYP   +
Sbjct: 126 LVWKYPKDDVEMRNFGQLLEQWREAIEDDAERTERMPLLLTAAVYYSPVYDSVSYPIREI 185

Query: 196 QVNLDWVHFLAYD 208
           +  LDWV+ +AYD
Sbjct: 186 KKKLDWVNLIAYD 198


>AT4G19800.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10760830-10762104
           REVERSE LENGTH=398
          Length = 398

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 109/182 (59%)

Query: 27  VKAGYYYSGSEISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQN 86
           VKA Y++  ++  A+DI ++LFTHL C+FA +   +Y + I +  +  F  FT TV+ +N
Sbjct: 7   VKASYWFPATDFPATDIDSSLFTHLFCTFADLEAESYEITIATWNQAPFHAFTETVQQRN 66

Query: 87  PSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSD 146
           P V TLLSI GG  +   F SM +    R SFI S+I  AR   F G+DL   +P+   +
Sbjct: 67  PHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEE 126

Query: 147 LINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLA 206
           + +FG LL+EWR A+ +E+ +S    L+L  A YY    + + YP  ++  +LDW++ +A
Sbjct: 127 MYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDWINLMA 186

Query: 207 YD 208
           YD
Sbjct: 187 YD 188


>AT4G19760.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10750381-10752028
           FORWARD LENGTH=369
          Length = 369

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 108/166 (65%)

Query: 43  IKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTNTVKLQNPSVSTLLSIWGGGENT 102
           I +TLFTHL C+FA ++ +T+ V I+++  ++FS+FT TVK +N  V TLLSI G   + 
Sbjct: 40  IDSTLFTHLFCAFADVDSSTHEVTISAANSYQFSSFTETVKEKNTDVQTLLSIGGKDADK 99

Query: 103 AIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSDLINFGTLLKEWRIAIA 162
           A+  SM + S  RK+FIDSSI  AR  +F G+DL   +P    ++ NFG LL+EWR A+ 
Sbjct: 100 AVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMTNFGKLLEEWRAAVV 159

Query: 163 SEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLAYD 208
            E+  +++  L+L  A YY    + + YP +++  NLD+V+ +AYD
Sbjct: 160 EESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYD 205


>AT4G19750.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10745682-10747127
           REVERSE LENGTH=362
          Length = 362

 Score =  140 bits (354), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 2/188 (1%)

Query: 23  TPSWVKAGYYYSGSE--ISASDIKATLFTHLLCSFAFINPTTYNVFINSSEEHKFSTFTN 80
           T S VKA Y+    E    A +I +T FTHL C+FA ++ +T+ V I+++   + S+FT+
Sbjct: 10  TNSIVKASYWVVKPENDFPAGNIDSTRFTHLFCAFADVDSSTHEVTISAANSCQVSSFTH 69

Query: 81  TVKLQNPSVSTLLSIWGGGENTAIFTSMLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAW 140
           TVK +N  V TLLSI G   + A+  SM + S  RK+FIDSSI  AR  +F G+DL   +
Sbjct: 70  TVKDKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEY 129

Query: 141 PKQGSDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESMSYPFESMQVNLD 200
           P    ++ NFG L+KEWR A+  E+  +++  L+L  A YY        YP +++  NLD
Sbjct: 130 PSNDVEMANFGKLVKEWRAAVVEESDRTNQLPLLLTAAVYYSPDYYGEEYPVQAIADNLD 189

Query: 201 WVHFLAYD 208
           +V+ +AYD
Sbjct: 190 FVNIMAYD 197


>AT4G19770.1 | Symbols:  | Glycosyl hydrolase family protein with
           chitinase insertion domain | chr4:10753310-10754181
           REVERSE LENGTH=261
          Length = 261

 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 57/101 (56%)

Query: 108 MLNQSSFRKSFIDSSIRTARGLEFRGIDLCGAWPKQGSDLINFGTLLKEWRIAIASEARN 167
           M + S  RKSFI S+I  AR   F G+DL   +P+  +++ +F  LLKEWR A+  EA +
Sbjct: 1   MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNAAEMSDFAELLKEWRYAVQGEAYS 60

Query: 168 SSKPELVLVMAGYYLKGSESMSYPFESMQVNLDWVHFLAYD 208
           S  P L+L    YY      + YP + +   LDWV+  AYD
Sbjct: 61  SELPVLILTATVYYSSNYNGVVYPVKFISELLDWVNIKAYD 101


>AT4G19740.1 | Symbols:  | Glycosyl hydrolase superfamily protein |
           chr4:10739567-10740302 REVERSE LENGTH=211
          Length = 211

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%)

Query: 129 LEFRGIDLCGAWPKQGSDLINFGTLLKEWRIAIASEARNSSKPELVLVMAGYYLKGSESM 188
           L F G+DL   +P    ++ NFG LL+EWR A+  E++ +    L+L  A YY     S+
Sbjct: 22  LGFYGLDLAWEYPNNDVEMNNFGKLLQEWRSAVEVESQRTGIRPLLLTAAVYYTSDYNSV 81

Query: 189 SYPFESMQVNLDWVHFLAYD 208
           SYP +++  +LDWV+ +AY+
Sbjct: 82  SYPVQAINRSLDWVNLIAYE 101