Miyakogusa Predicted Gene

Lj0g3v0284489.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284489.2 tr|G7KLG3|G7KLG3_MEDTR Defensin/CCP-like protein
OS=Medicago truncatula GN=MTR_6g052330 PE=4 SV=1,70.85,0,seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Herpes_UL52,DNA primase,CUFF.18970.2
         (616 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52800.3 | Symbols:  | DNA primases | chr5:21396053-21399419 ...   655   0.0  
AT5G52800.1 | Symbols:  | DNA primases | chr5:21396053-21398813 ...   580   e-165
AT5G52800.2 | Symbols:  | DNA primases | chr5:21396053-21398559 ...   526   e-149

>AT5G52800.3 | Symbols:  | DNA primases | chr5:21396053-21399419
           FORWARD LENGTH=614
          Length = 614

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/615 (55%), Positives = 423/615 (68%), Gaps = 27/615 (4%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEDKFSRHLIIRIPKASFKDNTHAGAFVSEICSRILTARGKDRS 294
           YAI G  DWIVELDSST+DKFSRH+I+ IPK +FKDN+H GAFV E+CSRI+ A+  D  
Sbjct: 242 YAIEGQEDWIVELDSSTKDKFSRHVIVIIPKVAFKDNSHVGAFVGELCSRIVNAKETDER 301

Query: 295 FEKLFVVKESSCNESASQLFVDTAVYTRNRCFRLHLSSKAGKRSVLLPTKRFKCKNLGEE 354
             KLFV KE+  N+SAS LFVDTAVY+RNRCFRL LSSKAGK SVLLPT RFKCK++GE 
Sbjct: 302 LRKLFVHKEA--NDSASLLFVDTAVYSRNRCFRLALSSKAGKTSVLLPTGRFKCKDMGER 359

Query: 355 DVFMASLICKIDAGCEKLLVCKTDLDCVKTLHFDTEVNGNLENSSQIPPEFTWNTCTSDV 414
           DVFM SLIC +++ CEKLLVCK + DC+KTL FDTEVN N     Q   +F  N  TSD+
Sbjct: 360 DVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDM 419

Query: 415 STTYLMGKSPFPFLDKFILSVASVGNIPGNIHSWYFFSEFGLIVYSMTKNRYCERIGRHH 474
           ST+Y  GKSPFP LD+FI S AS GN+PG I  WY+FSE GLIVYSM +NRYCERIGR H
Sbjct: 420 STSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVYSMLRNRYCERIGREH 479

Query: 475 KSNNVIYVVDLRRAVYYQKCHDPDCRGYRSPLREIPVHVFSNPSVDFGSSGMIGDKQPVD 534
           KSN+V+Y+VDLRR +YYQKC+DPDCR YRSP+R +P        V +      G  Q + 
Sbjct: 480 KSNHVMYIVDLRRGIYYQKCYDPDCRDYRSPIRPVPDSYLPEDMVYYQ-----GATQNLC 534

Query: 535 DEWRHQLDDNGKQSCLQYEGSIEDNSNDSWWLEAIQVAEDMEKENKQQITQLSSMEAIDD 594
           D    + + +  + C     +    S  SWWLEA++VA+D+  E+K +  +  + E  ++
Sbjct: 535 DNLYSEGECHVDKECDPDSAA----SRGSWWLEAVKVADDL--ESKPKTLEPLTWENYEE 588

Query: 595 GDEEWWQAAEITASQ 609
            D+ W  AAE +  Q
Sbjct: 589 DDDWWVAAAEESLKQ 603


>AT5G52800.1 | Symbols:  | DNA primases | chr5:21396053-21398813
           FORWARD LENGTH=506
          Length = 506

 Score =  580 bits (1495), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/484 (61%), Positives = 351/484 (72%), Gaps = 16/484 (3%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEDKFSRHLIIRIPKASFKDNTHAGAFVSEICSRILTARGKDRS 294
           YAI G  DWIVELDSST+DKFSRH+I+ IPK +FKDN+H GAFV E+CSRI+ A+  D  
Sbjct: 242 YAIEGQEDWIVELDSSTKDKFSRHVIVIIPKVAFKDNSHVGAFVGELCSRIVNAKETDER 301

Query: 295 FEKLFVVKESSCNESASQLFVDTAVYTRNRCFRLHLSSKAGKRSVLLPTKRFKCKNLGEE 354
             KLFV KE+  N+SAS LFVDTAVY+RNRCFRL LSSKAGK SVLLPT RFKCK++GE 
Sbjct: 302 LRKLFVHKEA--NDSASLLFVDTAVYSRNRCFRLALSSKAGKTSVLLPTGRFKCKDMGER 359

Query: 355 DVFMASLICKIDAGCEKLLVCKTDLDCVKTLHFDTEVNGNLENSSQIPPEFTWNTCTSDV 414
           DVFM SLIC +++ CEKLLVCK + DC+KTL FDTEVN N     Q   +F  N  TSD+
Sbjct: 360 DVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDM 419

Query: 415 STTYLMGKSPFPFLDKFILSVASVGNIPGNIHSWYFFSEFGLIVYSMTKNRYCERIGRHH 474
           ST+Y  GKSPFP LD+FI S AS GN+PG I  WY+FSE GLIVYSM +NRYCERIGR H
Sbjct: 420 STSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVYSMLRNRYCERIGREH 479

Query: 475 KSNN 478
           KSN+
Sbjct: 480 KSNH 483


>AT5G52800.2 | Symbols:  | DNA primases | chr5:21396053-21398559
           FORWARD LENGTH=450
          Length = 450

 Score =  526 bits (1354), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/451 (60%), Positives = 323/451 (71%), Gaps = 16/451 (3%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEDKFSRHLIIRIPKASFKDNTHAGAFVSEICSRILTARGKDRS 294
           YAI G  DWIVELDSST+DKFSRH+I+ IPK +FKDN+H GAFV E+CSRI+ A+  D  
Sbjct: 242 YAIEGQEDWIVELDSSTKDKFSRHVIVIIPKVAFKDNSHVGAFVGELCSRIVNAKETDER 301

Query: 295 FEKLFVVKESSCNESASQLFVDTAVYTRNRCFRLHLSSKAGKRSVLLPTKRFKCKNLGEE 354
             KLFV KE+  N+SAS LFVDTAVY+RNRCFRL LSSKAGK SVLLPT RFKCK++GE 
Sbjct: 302 LRKLFVHKEA--NDSASLLFVDTAVYSRNRCFRLALSSKAGKTSVLLPTGRFKCKDMGER 359

Query: 355 DVFMASLICKIDAGCEKLLVCKTDLDCVKTLHFDTEVNGNLENSSQIPPEFTWNTCTSDV 414
           DVFM SLIC +++ CEKLLVCK + DC+KTL FDTEVN N     Q   +F  N  TSD+
Sbjct: 360 DVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDM 419

Query: 415 STTYLMGKSPFPFLDKFILSVASVGNIPGNI 445
           ST+Y  GKSPFP LD+FI S AS GN+PG I
Sbjct: 420 STSYFGGKSPFPQLDQFIESTASTGNVPGCI 450