Miyakogusa Predicted Gene

Lj0g3v0284489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284489.1 Non Chatacterized Hit- tr|G3UTQ3|G3UTQ3_MELGA
Uncharacterized protein OS=Meleagris gallopavo
GN=CCDC,44.8,9e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.18970.1
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52800.2 | Symbols:  | DNA primases | chr5:21396053-21398559 ...   277   5e-75
AT5G52800.1 | Symbols:  | DNA primases | chr5:21396053-21398813 ...   276   7e-75
AT5G52800.3 | Symbols:  | DNA primases | chr5:21396053-21399419 ...   275   2e-74

>AT5G52800.2 | Symbols:  | DNA primases | chr5:21396053-21398559
           FORWARD LENGTH=450
          Length = 450

 Score =  277 bits (709), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/259 (55%), Positives = 176/259 (67%), Gaps = 14/259 (5%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEE 253
           YAI G  DWIVELDSST++
Sbjct: 242 YAIEGQEDWIVELDSSTKD 260


>AT5G52800.1 | Symbols:  | DNA primases | chr5:21396053-21398813
           FORWARD LENGTH=506
          Length = 506

 Score =  276 bits (707), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 145/259 (55%), Positives = 176/259 (67%), Gaps = 14/259 (5%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEE 253
           YAI G  DWIVELDSST++
Sbjct: 242 YAIEGQEDWIVELDSSTKD 260


>AT5G52800.3 | Symbols:  | DNA primases | chr5:21396053-21399419
           FORWARD LENGTH=614
          Length = 614

 Score =  275 bits (703), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/259 (55%), Positives = 176/259 (67%), Gaps = 14/259 (5%)

Query: 1   MDDVDRLFACFKCGLTPPXXXXXXXXXXXXXXXQ------GSSKHELSLESPDSGSVGRE 54
           MDDVDRLF CFKCG++PP                         K +LS  S  SG  G  
Sbjct: 10  MDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKRGE- 68

Query: 55  RKTSLVSSNTTNAESSVEKFKSAVTKTKRGKHISPVVFYGSPQGVPPKKPTRFLWRLLRE 114
            +  +  S + ++ S     K +V     G+  SP+VFYGSP GVPPKKP   L RLLRE
Sbjct: 69  -RNQIDGSVSVDSVSGSRDVKKSV-----GRQFSPIVFYGSPNGVPPKKPLSLL-RLLRE 121

Query: 115 IRLDLSQPNKLNLRKEVWTTFPRQDEAMKFAKGQEDVHVFSYQDHFTGKRRFLVSTYTEF 174
           IR+DLS+  K   RK VW TFPRQ+EA+KF K  ++V +FSYQDHF+G+RRFLVS+Y EF
Sbjct: 122 IRIDLSEERKAISRKGVWATFPRQEEAIKFEKRHDNVRIFSYQDHFSGQRRFLVSSYEEF 181

Query: 175 WRRYKSMDSKFRHHYEVIQEGLPCHLYFDLEFNKRVNIGRNGDEMVDLLISVVLEALHEK 234
           W+RY SMD + RHHYEVIQEGLPCH+YFDLEFN++ N G+N DEMVD+LISV+LEAL EK
Sbjct: 182 WKRYLSMDPRHRHHYEVIQEGLPCHMYFDLEFNQKENEGKNVDEMVDILISVILEALREK 241

Query: 235 YAIHGDHDWIVELDSSTEE 253
           YAI G  DWIVELDSST++
Sbjct: 242 YAIEGQEDWIVELDSSTKD 260