Miyakogusa Predicted Gene

Lj0g3v0283999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283999.1 Non Chatacterized Hit- tr|K3YQF5|K3YQF5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016498,28.05,3e-18,seg,NULL,CUFF.18928.1
         (619 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G36990.1 | Symbols:  | unknown protein; LOCATED IN: chloropla...   290   1e-78
AT4G08510.1 | Symbols:  | unknown protein; LOCATED IN: chloropla...   219   4e-57

>AT1G36990.1 | Symbols:  | unknown protein; LOCATED IN: chloroplast;
           EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast
           hits to 1779 proteins in 339 species: Archae - 2;
           Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants -
           111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI
           BLink). | chr1:14027594-14029711 REVERSE LENGTH=581
          Length = 581

 Score =  290 bits (743), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 215/512 (41%), Positives = 291/512 (56%), Gaps = 41/512 (8%)

Query: 81  AKHAYSSFN--RSHXXXXXXXXXXXTNFIDHWDRDGSDPLANLFSGRMERDTLRRSHSMV 138
           AKHAYSSFN  RS             +++D WD D S PL  + +GR + D LRRSHSMV
Sbjct: 81  AKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPLRTILTGR-DPDPLRRSHSMV 139

Query: 139 SRKQGEVLPRRVAADTKXXXXXXXXXXXAIRSGGSVGSSIQKAVFDKDFPSLGAEEKQGI 198
           +RKQGE L R +                 + SG S+G+S Q+  FDKDFPSLGAEEKQ  
Sbjct: 140 TRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSFQRTGFDKDFPSLGAEEKQNG 199

Query: 199 AEIRRVSSPVLGTTASQSLPVSSSALIGGEGWTSALAEVPSIIGSSSAGTLSAQQXXXXX 258
            ++ RVSSP + +   Q+LPV +SALIGGEGWTSALAEVP++I  +  G+L++ +     
Sbjct: 200 QDVVRVSSPGISSVV-QNLPVGNSALIGGEGWTSALAEVPNVIEKACTGSLTSPKANAVS 258

Query: 259 XXXXXXXXXXXXNMAEALAQTPSRARTAPQVSVQTQRLEELAIKQSRQLIPVTPSMPKAS 318
                       NMAEAL Q P+R  T PQ SV+TQRLE+LAIKQSRQLIPV PS PK  
Sbjct: 259 AGTLTGPSGL--NMAEALVQAPARTHTPPQGSVKTQRLEDLAIKQSRQLIPVVPSAPKGL 316

Query: 319 VLNSSEKLKPKTAVRNADMNVV-SKSVPQQPSGLHIAGQSVRSVNAKVDTPKTSGKFTDL 377
            LNSS+K K K  VR  +  +  S++  QQP+ L  + QS  S   K +      K   L
Sbjct: 317 SLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSFQSNPSGQIKPEK-----KLLVL 371

Query: 378 KTVVWENGASPISKDVSSP---TNSKSGNQHAV--TSAAASTPVRNPNNLKSSTERKPAS 432
           K    ENG S + K+  SP   TN+++ +   +  T +  S PVR+ N+ K   E K AS
Sbjct: 372 KP-ARENGVSAV-KESGSPSANTNTRAASSQLMSNTQSTQSAPVRSTNSPK---ELKGAS 426

Query: 433 S-DLKLGSPLDKKHSSSQVQSRNDFFNLIKKKTLMNSSAVLPESGPTVSSPSLEKSGEVN 491
           +  +  G  ++KK S++Q QSR+ F++ +K+K   ++S     + P  SS S   S EV 
Sbjct: 427 AFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTSIT---TDPVSSSTSASSSVEVK 483

Query: 492 M----EIVSPSASLESLGNGAELTSNGNAHEALCRTSDNEGKDSVLSATIYPDEEEAAFL 547
           +    ++++   S     +G E+T   ++ +    TS  E  D+       PDEEEA FL
Sbjct: 484 LNSSKDLIASDPSSSQATSGVEVT---DSVQVASHTSGFEATDT-------PDEEEAQFL 533

Query: 548 RSLGWEENSDEDEGLTEEEINAFYQECKNLDP 579
           RSLGW EN+ E E LTEEEI++F ++ K L P
Sbjct: 534 RSLGWVENNGE-EYLTEEEIDSFLEQYKELRP 564


>AT4G08510.1 | Symbols:  | unknown protein; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321
           proteins in 121 species: Archae - 0; Bacteria - 120;
           Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0;
           Other Eukaryotes - 579 (source: NCBI BLink). |
           chr4:5411023-5413016 FORWARD LENGTH=551
          Length = 551

 Score =  219 bits (558), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/506 (35%), Positives = 248/506 (49%), Gaps = 35/506 (6%)

Query: 82  KHAYSSFN--RSHXXXXXXXXXXXTNFIDHWDRDGSDPLANLFSGRMERDTLRRSHSMVS 139
           KHAYSSFN  RS+            +++D WD D S P      GR E + LRRSHSM +
Sbjct: 72  KHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFGTFLIGRGE-EPLRRSHSMTT 130

Query: 140 RKQGEVLPRRVAADTKXXXXXXXXXXXAIRSGGSVGSSIQKAVFDKDFPSLGAEEKQGIA 199
           RKQG  L +      K            I  G S   S ++  F+KDFP L  EE+ G  
Sbjct: 131 RKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSKRMGFNKDFPLLRGEERNGGP 190

Query: 200 EIRRVSSPVLGTTASQSLPVSSSALIGGEGWTSALAEVPSIIGSSSAGTLSAQQXXXXXX 259
           ++ R+SSP    TA QSL V++ ALI GEGWTSALAEVP++I  S        +      
Sbjct: 191 DVVRISSPGRSPTA-QSLSVANPALIIGEGWTSALAEVPNVIEKSGGA-----ESHANVG 244

Query: 260 XXXXXXXXXXXNMAEALAQTPSRARTAPQVSVQTQRLEELAIKQSRQLIPVTPSMPKASV 319
                      NMAEAL Q P R  T PQ     Q LE+ AI+QSRQLIPV PS PK SV
Sbjct: 245 NSATLSGPACRNMAEALVQAPGRTGTPPQA----QTLEDRAIRQSRQLIPVVPSAPKGSV 300

Query: 320 LNSSEKLKPKTAVRNADMNVVSKSVPQQPSGLHIAGQSVRSVNAKVDTPKTSGKFTDLKT 379
            NSS+K K K   R+ +  + S    QQ S + +   +++S       P T+ K   LK 
Sbjct: 301 HNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLG--NMQSNPGSQIKPDTTKKLVILKP 358

Query: 380 VVWENGASPISKDVSSPTNSKSGNQHAVT--SAAASTPVRNPNNLKSSTERKPASSDLKL 437
              ENG         SP NS+       T  S   +  VR+ N  +   + + AS ++  
Sbjct: 359 AR-ENGVVA----GGSPPNSRVAASQPTTAPSTQFTASVRSTNGPR---DLRGASVNMLA 410

Query: 438 GSPLDKKHSSSQVQSRNDFFNLIKKKTLMNSSAVLPESGPTVSSPSLEKSGEVNMEIVSP 497
           G   +KK S +Q QSR+ F++ +K+KT  N S    ++   + S S+E+    + E+V+ 
Sbjct: 411 GKAAEKKLSLAQTQSRHAFYSALKQKTCTNISTDPSKTSSCILS-SVEEQANSSKELVAS 469

Query: 498 SASLESLGNGAELTSNGNAHEALCRTSDNEGKDSVLSATIYPDEEEAAFLRSLGWEENSD 557
             S        E+       E++ + S+   + S   + + PD +EAAFL+SLGW+EN  
Sbjct: 470 DPSSPQAAERDEIM------ESVEKVSNVAERISRFESAVRPDPKEAAFLKSLGWDENDS 523

Query: 558 EDEGLTEEEINAFYQECKNLDPSTFK 583
           ++   T EE+  +   CK   PS  +
Sbjct: 524 DEYTHTMEEMREW---CKKFKPSLLQ 546