Miyakogusa Predicted Gene

Lj0g3v0283799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283799.1 Non Chatacterized Hit- tr|I1MJX4|I1MJX4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.36,0,SIGMA54_INTERACT_1,Sigma-54 interaction domain,
ATP-binding site 1; ATPases associated with a variet,CUFF.18944.1
         (2871 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67120.1 | Symbols:  | ATPases;nucleotide binding;ATP binding...  2885   0.0  

>AT1G67120.1 | Symbols:  | ATPases;nucleotide binding;ATP
            binding;nucleoside-triphosphatases;transcription factor
            binding | chr1:25069727-25095526 REVERSE LENGTH=5393
          Length = 5393

 Score = 2885 bits (7478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1547/2955 (52%), Positives = 2003/2955 (67%), Gaps = 168/2955 (5%)

Query: 1    MAIDGSFSIESSLRRFLDRCPELQ--PKFGSLAEKGS-LVTEEEVVDSLVRVFLHPRYTI 57
            MAIDGSF+++ +L  F  RCP++   P F S+  KG  +V  EEV+ +L   FLHP +T+
Sbjct: 1    MAIDGSFNLKLALETFSVRCPKVAAFPCFTSILSKGGEVVDNEEVIHALGDAFLHPEFTV 60

Query: 58   PLIGCFRPIARNFVDKAVALLRLVKNLRSDTEGTAMEIDGEGDSVLGDVEDVVESY-SEG 116
            PL+ CF PI RN VD+ V LLRLV +L+S  + +  ++    D+ + +   V++ Y   G
Sbjct: 61   PLVHCFLPIIRNVVDRVVGLLRLVDDLKSSIDYSD-DVSSVLDNAMTEGISVIDFYVRRG 119

Query: 117  RGLVLHEFACLAFCRALDMFPFLLSSVLNYFNFAPAPFERFSMKQATVEIHE------LN 170
            + L LHE ACLAF RAL     LL S+LNYF  AP P+ER  +K    E         L 
Sbjct: 120  QRLELHECACLAFSRALHFNTSLLGSILNYFEKAPPPYERILVKDIVSESRMEATDAYLL 179

Query: 171  VAQISYRLLLMEPEIFSKLWDWSCFLDLVKE----PQKP--------DLLWSGVQILGVV 218
              ++SYR L++ PE+FSKLWDWSC+LD +K     P++         D +W G+QIL VV
Sbjct: 180  CLRVSYRFLVIRPEVFSKLWDWSCYLDSMKRLSECPRQQRHFLEKYRDAVWCGIQILSVV 239

Query: 219  LKLGFRATESLNIVADKAFECQLRWEEFCRDTALEKAAWFVDSADHMSGSTDRSMDFNQA 278
            L+   R         ++A  C LRWEEFC+D  +EKA  ++    + +  +       Q 
Sbjct: 240  LRCSDRLAGCFGFEEEEALSCLLRWEEFCQDIEIEKAGLYIQLPTYTALKS-----LQQF 294

Query: 279  NCLKSFRSNHQAISSPNLHELQPPLRSQRRYTRDGMSLSSTFILTSAVKQSYQRVLLASS 338
            N L    +  Q   S  L   +P ++ +R  T D  S S  F + S VK+S++ V LA S
Sbjct: 295  NTLVPGINKRQ---SAGLEADEPQMKIRRLDTWDVNSFSEPFEIHSRVKKSFEMVSLAVS 351

Query: 339  QKWPVLLYGPSGSGKSALIAKLAEESGNKVLSIQMDDQIDGRTLVGGYVCTDRPGEFRWQ 398
            QK PVLLYGPSGSGKSALI KLA+ESGN V+ I MDDQ+DG+TLVG YVCTD+PGEFRWQ
Sbjct: 352  QKRPVLLYGPSGSGKSALIRKLADESGNHVVFIHMDDQLDGKTLVGTYVCTDQPGEFRWQ 411

Query: 399  PGSLTQAVLNGFWIVFEDINKAPSDVHSILLPLLEGAGSFMTGHGEVIKVAENFRLFSTI 458
            PGSLTQA++NGFW+V EDI+KAPSDV  +L  LL G+ SF+T  GE I++AE F+LFSTI
Sbjct: 412  PGSLTQAIMNGFWVVLEDIDKAPSDVPLVLSSLLGGSCSFLTSQGEEIRIAETFQLFSTI 471

Query: 459  AVSKFDSSEI-SGQYSLSVLWRKVMIQPPGNDDLHEIVKVNYPDLEPLAGKLIETFETVN 517
            +  +   S I     SLS LWR++++ PP  + L  I+   YP+L P+A KLIETFET+N
Sbjct: 472  STPECSVSHIRDAGNSLSPLWRRIVVYPPDRESLQSILGARYPNLGPVAEKLIETFETIN 531

Query: 518  SISMPQIAGHL----------GRFSLRDLLKWCKRIAGLGFSFDGSLPEEKCNSVCKEAI 567
            S   PQ +              RFSLRDLLKWC+R+ GL  S+DG       ++V +EA 
Sbjct: 532  SALRPQFSSSTTENSATFSSPSRFSLRDLLKWCERVHGLP-SYDG-------HAVYQEAA 583

Query: 568  DVFATFSTSLKNRLLIMKEIKKLWKIRDSAVEALYPPDKPIIQDFVTELRIGRVSLQYTK 627
            D+F+  + S+KNR+ + + +  +W +     +     DKP IQ+F   L+IGRVSL    
Sbjct: 584  DIFSASNMSVKNRVAVSEIVASIWNVAVPESQ-----DKPPIQEFSGILKIGRVSL---- 634

Query: 628  KPLPEGKKH----FVEIRRS------LYGSVKYNEPVLLVGETGTGKTTLVQNLASRLGQ 677
             PL E   H    FVE R S      +  SV+YNEPVLLVGETGTGKTTLVQNLA  +GQ
Sbjct: 635  -PLGETASHDRSRFVETRTSTRLLEKIARSVEYNEPVLLVGETGTGKTTLVQNLAHWIGQ 693

Query: 678  RLTVLNMSQQSDVADILGGFKPVDAQFVYFPLYKEFEDLFSRTFSMKGNVDFLRHLQEFL 737
            +LTVLN+SQQSD+ D+LGGFKP+D + +   +Y EF +L +R   +K +   ++ LQ+  
Sbjct: 694  KLTVLNLSQQSDIVDLLGGFKPIDPKLMCTMVYNEFNEL-ARDLKIKDDSKIMKWLQDNF 752

Query: 738  SRKNWEMLLKGFR---KGVEKAVEL--------IRTGPSKKRKRPLKEEKIQAWERFSMK 786
              K W   L G     KG+E  +           R+   +KRK+P  EE+++       K
Sbjct: 753  RAKKWHTFLTGLLDIIKGIEGRITERMEGKIGEARSRSGRKRKKP--EEELKNCACLRTK 810

Query: 787  LESIYQSNPSSGMMFSFVEGSFVTALRNGEWILLDEVNLAPPETLQRIVGVLEGENGALC 846
            +  I Q   S GM+F+FVEG+FVTALR G W+LLDEVNLAPPE L R++GVLEG  G+LC
Sbjct: 811  VNKIRQQIHSGGMVFTFVEGAFVTALREGHWVLLDEVNLAPPEILGRLIGVLEGVRGSLC 870

Query: 847  LAERGDIDYIHRHPNFRIFACMNPATDAGKRDLPFSLRSRFTEYFXXXXXXXXXXSLFIS 906
            LAERGD+  I RH NFR+FACMNPATDAGKRDLPFS RSRFTEY            +F+ 
Sbjct: 871  LAERGDVMGIPRHLNFRLFACMNPATDAGKRDLPFSFRSRFTEYAVDDDICDDDLEIFVR 930

Query: 907  RFIKEDHKNNDVVLDRWRVNKIVCFYKESKKESEERLQDGANQKPQYSLRSLYRALEYTR 966
            RF+     ++ +V +      IV FYKE+K+ SEE LQDGANQKPQYSLRSLYRALEY  
Sbjct: 931  RFLGGRGSDSKLVAN------IVWFYKEAKRLSEESLQDGANQKPQYSLRSLYRALEYAI 984

Query: 967  KAKKKFGFEKALYDGFSMFFLTMLDGPSAKIMRQKILSLLLGGKLPSHVDFVSYLDTF-- 1024
            KA+   GF+KALYDGFSMFFL++LD  SAKI+ + I+  + G  + S      YL     
Sbjct: 985  KAEAIGGFQKALYDGFSMFFLSLLDASSAKIV-EPIIKRISGENIRSQ-PLQRYLGELKG 1042

Query: 1025 NSDGYSGRYVQTKSIQEHLGNLARAVLIKRYPVLLQGPTSSGKTSLVKYLAATTGHEFIR 1084
            +SD + G YV+TKS+ +HL +LA A+ IKRYPVLLQGPTSSGKTSLVKYLAA +G++F+R
Sbjct: 1043 SSDKFVGSYVKTKSVIDHLNHLAHAIFIKRYPVLLQGPTSSGKTSLVKYLAAISGNKFVR 1102

Query: 1085 INNHEHTDLQEYLGSYITDASGKLVFNEGALVKAVRNGYWIVLDELNLAPSDVLEALNRL 1144
            INNHE TD+QEYLGSY+TD+SGKLVF+EGALVKAVR G+WIVLDELNLAPSDVLEALNRL
Sbjct: 1103 INNHEQTDIQEYLGSYMTDSSGKLVFHEGALVKAVRGGHWIVLDELNLAPSDVLEALNRL 1162

Query: 1145 LDDNRELFVPELQLTIQAHPDFMLFATQNPPTHYGGRKMLSRAFRNRFVEIHVEEIPDDE 1204
            LDDNRELFVPEL  TI AHP+FMLFATQNPPT YGGRK+LSRAFRNRFVEIHV+EIP+DE
Sbjct: 1163 LDDNRELFVPELSETISAHPNFMLFATQNPPTLYGGRKILSRAFRNRFVEIHVDEIPEDE 1222

Query: 1205 LSQILCEKCEIPPSYAKIMVEVMTELHLQRQSSRVFAGKHGFITPRDLFRWANRFKMF-G 1263
            LS+IL  KC I  S+A  MVEVM +L   RQSS+ FAGKHG+ITPRDLFRWA RF+ + G
Sbjct: 1223 LSEILTTKCSIANSHASKMVEVMKDLQRNRQSSKAFAGKHGYITPRDLFRWAYRFRTYDG 1282

Query: 1264 KTKEDLAEDGYYLLAERLRDENEKSVVHKALCKPRRVENEKSDVHKAQSKHCQEELNIKN 1323
             + E+LA +GYY+LAERLRD+ EK VV + L +  RV   K D++  +        +I+N
Sbjct: 1283 TSHEELAREGYYILAERLRDDTEKVVVQEVLERHFRVSLAKDDLYNMELPRLD---SIQN 1339

Query: 1324 LYNQHSCLIGESSKGLERVILTKSMQRLYFLLERCFQLREPVLLVGETGGGKTTVCQLLS 1383
                             +   T+SM+RL+FL++R ++LREPVLLVG+TGGGKTT+CQ+LS
Sbjct: 1340 ----------------RKFTWTQSMRRLFFLIDRSYKLREPVLLVGDTGGGKTTICQILS 1383

Query: 1384 AHLKLKLHILNCHQYTETSDFIGGFRPIRERSRLISEFKDILEQLKKLKAFTYYPENLLV 1443
               K +LHILNCHQYTETSDF+GGF P+R+RS+LI+E+++ ++QL+  +A T + +++++
Sbjct: 1384 DVKKKRLHILNCHQYTETSDFLGGFFPVRDRSKLITEYENQVKQLELSQALTPFGQDIVI 1443

Query: 1444 SSDIDQASSTIKSLSDMICKYKEGKVCIADVNSEDLYDFEQLKLKLEVLHQKWQSIFVWQ 1503
              DI +A  +IKS+   + KYK G V       +D+   E+++  + +L+QKW++IFVWQ
Sbjct: 1444 CGDISRAEVSIKSVEVALEKYKNGSVIGVAATPQDVDFLEKIRNNMVMLYQKWRAIFVWQ 1503

Query: 1504 DGPLVRAMRDGDLFLVDEISLADDSVLERLNSVLEPERMLSLAEKGGPALEKVEAHSNFF 1563
            DGPLV AMR G++ LVDEISLADDSVLER+NSVLE +R LSLAEKGGP LE+V AH +FF
Sbjct: 1504 DGPLVEAMRAGNIVLVDEISLADDSVLERMNSVLETDRKLSLAEKGGPVLEEVVAHEDFF 1563

Query: 1564 VLATMNPGGDYGKKELSPALRNRFTEIWVPPVNDLDELQEIALKRISNLGPAYQQRLSLI 1623
            VLATMNPGGDYGKKELSPALRNRFTEIWVPP+ D +EL+ IA   +S+L      + S +
Sbjct: 1564 VLATMNPGGDYGKKELSPALRNRFTEIWVPPITDTEELRSIAFSGLSSL------KESNV 1617

Query: 1624 VNTMVSFWEWFNKLHPGRMLTVRDLISWVAFFDVTVERLGPEYALLHGAFLVLLDGLSLG 1683
            V+ +++FWEWFN+LH GR LTVRDL+SWVAF ++  E LGP YA+LHGAFLVLLDGLSLG
Sbjct: 1618 VDPIINFWEWFNRLHTGRTLTVRDLLSWVAFVNMATESLGPAYAILHGAFLVLLDGLSLG 1677

Query: 1684 TGMSKIDAAELRERCLSFLLQKLSVDESNLLYSKLSQMENYGWGEFGRTEXXXXXXXXXX 1743
            TG S  D  +LRE+C +FLLQ+L +  S+ L  +LS+ME YGWG+               
Sbjct: 1678 TGFSGRDGQDLREKCFAFLLQQLELFASDTLPLELSRMELYGWGD--SKAICEKSKSVRH 1735

Query: 1744 XXLFGIHPFYIKKGFGSCENGGFEFKAPTTHRNALRVLRAMQLPKPVLLEGSPGVGKTSL 1803
              +FGI PF+I KG  + E GGFEF APTTHRN LRVLRAMQL KP+LLEGSPGVGKTSL
Sbjct: 1736 EGMFGIDPFFISKGDENPEIGGFEFLAPTTHRNVLRVLRAMQLSKPILLEGSPGVGKTSL 1795

Query: 1804 ITAMGKASGHRVVRINLSEQTDMMDLLGSDLPVESDEGVMFSWSDGILLQALKEGCWVLL 1863
            I A+GK SGH+VVRINLSEQTDMMDLLGSDLPVESDE + F+WSDGILLQALKEG WVLL
Sbjct: 1796 ILALGKYSGHKVVRINLSEQTDMMDLLGSDLPVESDEDMKFAWSDGILLQALKEGSWVLL 1855

Query: 1864 DELNLAPQSVLEGLNAILDHRAEVFIPELGKTYNCPPSFRVFACQNPSLQGGGRKGLPRS 1923
            DELNLAPQSVLEGLNAILDHRA+VFIPELG T+ CPP+FRVFACQNPS QGGGRKGLP+S
Sbjct: 1856 DELNLAPQSVLEGLNAILDHRAQVFIPELGCTFECPPTFRVFACQNPSTQGGGRKGLPKS 1915

Query: 1924 FLNRFTKVYMDELVDEDYLSICXXXXXXXXXXXXXXXXXXNKRMHEETMLNSKFAREGFP 1983
            FLNRFTKVY+DELV++DYL IC                  N+++H+ TML  KF  +G P
Sbjct: 1916 FLNRFTKVYVDELVEDDYLFICRSLYPSVPSPLLSKLIALNRQLHDGTMLYRKFGHDGSP 1975

Query: 1984 WEFNLRDVFRSCEIIEGAPKYLGEHSFLNIVYIQRMRTEADRKEVLRIFKEVFEVTPFIN 2043
            WEFNLRDV RSC+ ++ A   L   SFLN++YIQRMRT  DRKEVLRI+K +F+ TP IN
Sbjct: 1976 WEFNLRDVIRSCQFMQEAIHDLEVESFLNVLYIQRMRTATDRKEVLRIYKAIFDKTPSIN 2035

Query: 2044 PYPRVHLNSDNLVVGSVTIKRSHAQPHIASESHLLILPEIRQSLEAAAQCVERQWLCILI 2103
            PYPRV LN   LVVG+  IKR+  Q +IASE  L +LPEIRQ+LEA A CV+ +WLCIL+
Sbjct: 2036 PYPRVQLNPAYLVVGTAAIKRNLNQSNIASE-QLKLLPEIRQNLEAVAHCVQNKWLCILV 2094

Query: 2104 GPSSSGKTSLIRLLANLTGNVVNEINLSSATDISELLGSFEQYDALRTFRTVVAQVERYV 2163
            GPSSSGKTS+IR+LA LTG  +NE+NLSSATD S+LLG FEQY+A R FR V+ +VE  V
Sbjct: 2095 GPSSSGKTSVIRILAQLTGYPLNELNLSSATDSSDLLGCFEQYNAFRNFRLVMTRVEHLV 2154

Query: 2164 NEYCSLQLEASKEVIFRERD-LHNKWIVFLSGVKFDSLAASASDYFETWQKIICSLSLLA 2222
            +EY SL L++S+E +F  R  L ++W+ +L+  K DS       +F    +   +LS L 
Sbjct: 2155 DEYNSLLLQSSQEALFSNRSGLVSRWLSYLN--KIDSSLVENPLFFLNDSE---TLSTLE 2209

Query: 2223 EIIKQLKLIVEKNSLPLSYSTGELDLALQTIQKLEADDQIRLVSTKFEWVTGLLIKAIEQ 2282
            E+++ L+ ++++  LP+S+S   L+   +TI +L+  ++ +  STKFEWVTG+LIKAIE+
Sbjct: 2210 EVVEDLEQVLKEGVLPVSWSKKYLEQISKTILQLQTHEKKQ--STKFEWVTGMLIKAIEK 2267

Query: 2283 GEWIVLDNANLCNPTVLDRINSLVEPCGSITVNERGIIDGNPLVIHPHPNFRMFLTVNPH 2342
            GEW+VL NANLCNPTVLDRINSLVEPCGSIT+NE GI++G P+ + PHPNFR+FL+VNP 
Sbjct: 2268 GEWVVLKNANLCNPTVLDRINSLVEPCGSITINECGIVNGEPVTVVPHPNFRLFLSVNPK 2327

Query: 2343 YGEVSRAMRNRGVEIFMMQPYWALDDGSGYNYENTEFKDVKRFLIVSGIPIAQLIESMAK 2402
            +GEVSRAMRNRGVE+FMM P+W L++  G N E    + V+RFL +SGIP  +L+ SMAK
Sbjct: 2328 FGEVSRAMRNRGVEVFMMGPHWQLNE-DGSNCEELVLRGVERFLALSGIPGYKLVTSMAK 2386

Query: 2403 AHIYAKNKGSELNIHITYLELSHWGHLFLQILMNGCHPIWSLQLSWEHIYLSSLGV-EGV 2461
            AH++A   G    + ITYLEL  W HLF  +LMNG   +WSLQLSWEHIYLSSLGV +G 
Sbjct: 2387 AHVHAWLNGQSFGVRITYLELEQWVHLFQLLLMNGNQLLWSLQLSWEHIYLSSLGVTDGK 2446

Query: 2462 KVINYAKTTYLAGY-----DSLVSXXXXXXXXXXXXXXXXDYIYCSKEASIKQNCMYLEF 2516
            +V+++ + TYL+       DS +                 D  + S+E +++QNCMYLEF
Sbjct: 2447 EVVDFVRETYLSDVELSELDSFMGGDLYLPGGWPKPFNLRDLTWYSRETTVRQNCMYLEF 2506

Query: 2517 LGTQIASHQYQIARRRNATSCLQTAGDHLSSYLMDTRTLLEIIFPKFSTETISDSERECE 2576
            LG Q ASHQ +I+    +      AG+    Y +D+ TL +++FPK    + S +     
Sbjct: 2507 LGAQYASHQPKISDNVKSRDRELAAGEPRIIYSIDSWTLKKVLFPKALIGS-SCAPDAAN 2565

Query: 2577 FDSDLTNKMLLFAAYWTIEQVTESDWELYRLRFNWFSSQLQPFCQFFNNFLKLMDQLIKH 2636
            F++DL +KMLLFAA WTIEQ TE D +LY   F+WF S+LQ  C F   FL  +    +H
Sbjct: 2566 FENDLASKMLLFAANWTIEQATEEDIQLYLAWFSWFGSRLQQHCPFLLCFLNTLKVEFEH 2625

Query: 2637 PIWEYISSRGK-------LDFDLQLMPLLSLDIVDLKASNGK----IKYLCNAICCFDPL 2685
            PIW +IS   K       LD D   +P+LS  ++D+ ASN +     K L  ++     L
Sbjct: 2626 PIWNHISRCRKNLKFLCRLDPDAVPIPMLSSKLIDVAASNDQSKPYSKSLFESLNSVGVL 2685

Query: 2686 RLTYQQWMTE-NLHSFDDKTFSPVLKSLHILEDEFLNKLVSSTHMLIEDQTFDYKIQLYS 2744
            R +YQQW+ E N +  D  TF+  L SL +LE + L ++V +        +F   IQLY+
Sbjct: 2686 RRSYQQWLVESNDNHTDVSTFTRFLDSLRVLEKKILCEIVGAP-------SFSVLIQLYT 2738

Query: 2745 DLIQDHVLFWQHFISRRSDHMIISWHSLVKVAGKFIHICPEAVNDFLMASENLKRF---- 2800
            ++I +H  FW   +S   ++++ S+ SL+K   K     P  V   L  S+N+       
Sbjct: 2739 EVIDNHSFFWSGLVSSSDEYLLFSFWSLIKSIKKMHSFFPGEVQVVLEESKNINNIVLHG 2798

Query: 2801 -SEESLLWIHGGHPFLPSNSDVHDKHHQLLKFVESLWPRNRASSNQGIVSSHLGASFDH- 2858
              E+S+LW +GGHP LP ++++  K  + L+   ++WP    S   G  + HL  +    
Sbjct: 2799 HPEKSMLWAYGGHPSLPVSAELFHKQQEFLQLCSTVWPLKSESDEHG--NDHLTKAIPFS 2856

Query: 2859 --DLRFVAMQGILLA 2871
              +L  +A++G+ ++
Sbjct: 2857 GPELCLLALEGLCIS 2871