Miyakogusa Predicted Gene
- Lj0g3v0283589.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0283589.2 Non Chatacterized Hit- tr|B8A196|B8A196_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,27.76,3e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; SUBFAMI,CUFF.18901.2
(596 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 476 e-134
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 209 5e-54
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 208 9e-54
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 5e-52
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 9e-51
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 192 7e-49
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 8e-49
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 7e-46
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 2e-45
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 3e-45
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 7e-45
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 7e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 178 1e-44
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 3e-44
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 6e-44
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 2e-43
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 8e-41
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 162 5e-40
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 162 6e-40
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 162 8e-40
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 1e-38
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 157 2e-38
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 7e-36
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 4e-35
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 139 7e-33
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 8e-33
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 136 4e-32
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 129 5e-30
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 129 7e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 8e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 125 1e-28
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 122 6e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 119 6e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 117 2e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 106 5e-23
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 6e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 100 3e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 4e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 91 3e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 91 3e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 84 2e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 84 3e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 84 4e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 83 7e-16
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 81 2e-15
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 80 3e-15
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 80 3e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 80 4e-15
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 80 5e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 9e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 75 1e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 74 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 74 4e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 73 5e-13
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 69 1e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 69 1e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 7e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 64 3e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 63 7e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 62 9e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 60 6e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 59 1e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 58 2e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 58 2e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 57 3e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 57 5e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 56 6e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 56 8e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/593 (43%), Positives = 373/593 (62%), Gaps = 24/593 (4%)
Query: 6 SLYVTCGE--THLFPSHNVFQRFLNSAIQSIQQCVAQIFGSEHDIIEHASFCGRICWEED 63
+L ++CGE + F + + L+ ++ + +A IF + D +
Sbjct: 2 ALLISCGEVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDF--------------E 47
Query: 64 MGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRE 123
M LS S G + L ++ S ++ A+FN LD +LK SL+RL +RE
Sbjct: 48 MRLSCIERPPSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRE 107
Query: 124 NISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIV 183
++ K + + + H++ +R LCL+GKL+AA+ L++ M+ G +P + THNH++
Sbjct: 108 SVCQTK----SFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLL 163
Query: 184 NGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGI 243
NGLCK G +EKA D LVREM E GP PN V+YNTLIKG C+VN+VDKALYL+++M GI
Sbjct: 164 NGLCKAGYIEKA-DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGI 222
Query: 244 QPNRVTCNILVHALCENGHL-KEAKKMLEEILNDDK-DIP-DLVTSTVFMDHYFKNREFI 300
+PNRVTCNI+VHALC+ G + KK+LEEIL+ + + P D+V T+ MD FKN +
Sbjct: 223 RPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVV 282
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
QA +W EM Q ++ D V YNV+I GLC + M AYG+ C+M+K+GV PD FTYN LI
Sbjct: 283 QALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 342
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
AL KEGK EAC + G M G+ PD+ISYKV+I+GLC D+ RA E L ML + ++
Sbjct: 343 SALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLL 402
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P+ ++WN++ID YGR D S+A+ +LML +GV PNV+T NALI +VK G + A+ +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
K EM + + PD TYNLL+GAAC L A QL EM+++G +PD+I+YTELVR C
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
+G K+AE ++I +G+ DHVP IL Y +L+ P +A+ +++ WL ++
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATR 575
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 222/425 (52%), Gaps = 8/425 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL- 209
L L K A+ L MV KG PD+ T+ +VNGLCK G + A + L + +E G L
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK--MEQGKLE 253
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P ++ YNT+I G C +D AL L+ M GI+PN VT + L+ LC G +A ++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L +++ + K PD+ T + +D + K + ++A L++EM + S++ +V Y+ LING C
Sbjct: 314 LSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ ++ A M+ K PD TYN LI K + E + MS+ G+V + +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRD 447
+Y ++I+GL D A+E+ M+++ + P + +N ++D G CK+ + A++ +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKNGKLEKAMVVFE 490
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ + + P ++TYN +I K+G + + L + KG+ PDVV YN +I C
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
S + A L +EM + G P+ Y L+R G+ + + E ++ G D +
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610
Query: 568 ILFNM 572
++ NM
Sbjct: 611 LVTNM 615
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 217/453 (47%), Gaps = 2/453 (0%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
+++ ++ + C +L A+ + M++ G+ P++ T + ++NG C + +A
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV-A 172
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
LV +M G PN VT+NTLI G N +A+ L M G QP+ VT ++V+ LC
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+ G A +L + + K P ++ +D K + A +L+ EM + +V
Sbjct: 233 KRGDTDLAFNLLNK-MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V Y+ LI+ LC + A +M+++ + PD FT++ LI A KEGK EA +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M K I P ++Y +I G C + AK++ M++ P + +N +I + + K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
V + M + G+ N TYN LI ++G+ A + +EM++ G+ P+++TYN
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
L+ C + A+ + + + P + +Y ++ C G ++ + + + G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 559 LMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ D V + + +C+ +A LF++ E
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 208/438 (47%), Gaps = 37/438 (8%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K + I L M G + +T++ ++N C+ + A L + M++ G PN+VT
Sbjct: 96 KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK-MMKLGYEPNIVTL 154
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
++L+ GYC + +A+ L M TG QPN VT N L+H L + EA +++ ++
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PDLVT V ++ K + AF+L N+M Q +E V+ YN +I+GLCK + M+
Sbjct: 215 KGCQ-PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KG+ P+ TY+ LI L G+ +A +L M + I PD ++ +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ +V A++L D M+K +
Sbjct: 334 DAFVKEGKLVEAEKLY-----------------------------------DEMVKRSID 358
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
P++ TY++LI + A + E M++K FPDVVTYN LI C + + +++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
REM Q+G + ++Y L++ G+ A+E + +++ G+ + + L + CK
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 576 LEEPVKAFNLFQDWLESK 593
+ KA +F+ SK
Sbjct: 479 NGKLEKAMVVFEYLQRSK 496
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 76/405 (18%)
Query: 184 NGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGI 243
NGL ++ L + L EM++ P P+++ ++ L+ +N D + L M + GI
Sbjct: 55 NGLSELKLDDAVA--LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
N T +IL++ C L A
Sbjct: 113 PHNHYTYSILINCFCRRSQLP------------------------------------LAL 136
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
++ +M + E ++V + L+NG C ++ ++ A +M G P+ T+N LI L
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ K EA ++ M G PD ++Y V++ GLC D +L + +LN + K
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT----DLAFNLLNKMEQGK- 251
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+ P V YN +I K ++ A +L +E
Sbjct: 252 ------------------------------LEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M TKG+ P+VVTY+ LI CN A +L +M+++ PD+ +++ L+ G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNMYC---KLEEPVKAFNL 585
EAE+ Y +++K + V L N +C +L+E + F
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 1/268 (0%)
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
NGL + +L + A EM+K P ++ L+ A+ K K + M +GI
Sbjct: 55 NGLSELKLDD-AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
+ +Y ++I C + A +L M+ P + + +++ Y K +S A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
D M G PN T+N LI A +L + M+ KG PD+VTY +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
D A L +M Q P ++ Y ++ C + +A + ++ G+ + V
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 566 VQILFNMYCKLEEPVKAFNLFQDWLESK 593
L + C A L D +E K
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERK 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C GK+E L + KG PDV +N +++G C+ G E+A D L +EM E G LP
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFKEMKEDGTLP 569
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
N YNTLI+ + + L M G + T ++ + L +G L ++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 231/474 (48%), Gaps = 28/474 (5%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQR--- 165
+++ S RL ++ + +S+V + H +L L+A IR +R
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLA----------QAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 166 -------IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTL 218
M++ P+VFT+N ++ G C G ++ A L +M G LPN+VTYNTL
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL-TLFDKMETKGCLPNVVTYNTL 246
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
I GYC + +D L SMA G++PN ++ N++++ LC G +KE +L E +N
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE-MNRRG 305
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
D VT + Y K F QA + EM ++ + V+ Y LI+ +CK MN A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
+ +M +G+ P+ TY L+ ++G EA +L M+ G P ++Y +I G
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
C + A +L M + P + ++ ++ + R DV A+ + M++ G+ P+
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
TY++LI + A L EEML GL PD TY LI A C + ALQL E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 519 MVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM-NDHVPVQILFN 571
MV+KG PD+++Y+ L I G K++ R AK L L + VP + ++
Sbjct: 546 MVEKGVLPDVVTYSVL-----INGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 210/413 (50%), Gaps = 7/413 (1%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS---VDKALYLYSSM 238
+V ++ L++KA +V G +P +++YN ++ T+ S + A ++ M
Sbjct: 140 VVKSYSRLSLIDKALS-IVHLAQAHGFMPGVLSYNAVLDA--TIRSKRNISFAENVFKEM 196
Query: 239 ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNRE 298
++ + PN T NIL+ C G++ A + ++ + +P++VT +D Y K R+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK-METKGCLPNVVTYNTLIDGYCKLRK 255
Query: 299 FIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
F L M +E ++++YNV+INGLC+ M EM ++G D TYN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
LI KEG +A + M + G+ P I+Y +I +C ++ RA E L M
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ P + ++D + + ++ A M G P+V TYNALI H +G + A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
++ E+M KGL PDVV+Y+ ++ C D AL+++REMV+KG +PD I+Y+ L++
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 539 CIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
C + TKEA + Y ++L+ GL D L N YC + KA L + +E
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 220/456 (48%), Gaps = 52/456 (11%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C K++ +L R M KG P++ ++N ++NGLC+ G M++ +++ EM G +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV-SFVLTEMNRRGYSLD 309
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
VTYNTLIKGYC + +AL +++ M G+ P+ +T L+H++C+ G++ A + L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ + P+ T T +D + + +A+ + EM N VV YN LING C
Sbjct: 370 Q-MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
M A +M +KG+ PD +Y+ ++ + EA + M + GI PD I+Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I+G C R R KE C DLY + ML+
Sbjct: 489 SSLIQGFCEQR---RTKE--AC-----------------DLY-------------EEMLR 513
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P+ FTY ALI A+ G++ +A L EM+ KG+ PDVVTY++LI
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 512 ALQLRREMVQKGHRPDLISY---------------TELVRESCIRGNTKEAEERYAKILK 556
A +L ++ + P ++Y L++ C++G EA++ + +L
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
D I+ + +C+ + KA+ L+++ ++S
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 19/237 (8%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C ++ A+R++R MV+KG PD T++ ++ G C+ ++A D L EML G P
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD-LYEEMLRVGLPP 518
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ TY LI YC ++KAL L++ M + G+ P+ VT ++L++ L + +EAK++L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSL----------------WNEMRQNSM 314
++ ++ +P VT +++ N EF SL + M +
Sbjct: 579 LKLFYEE-SVPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ D AYN++I+G C+ + AY EM+K G L T L+ AL KEGK E
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
E++YT A + C+EG LE A++L MV+KG LPDV T++ ++NGL K +A
Sbjct: 520 EFTYT---ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L++ E +P+ VTY+TLI+ + + S+ L+
Sbjct: 577 LLLKLFYE-ESVPSDVTYHTLIENCSNIE--------FKSVVS------------LIKGF 615
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C G + EA ++ E +L + PD + + + + + +A++L+ EM ++ +
Sbjct: 616 CMKGMMTEADQVFESMLGKNHK-PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
V L+ L K +N +L+ L +A +L+ +EG +L
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 378 VMSKMGIVPDEIS 390
M+K G +P+ IS
Sbjct: 735 EMAKDGFLPNGIS 747
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS------------- 471
V++L++ Y R + A+ L G P V +YNA++ A ++S
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 472 -----------------------GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
GNI A +L ++M TKG P+VVTYN LI C LR
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
D +L R M KG P+LISY ++ C G KE ++ + G D V
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 569 LFNMYCK 575
L YCK
Sbjct: 316 LIKGYCK 322
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 210/413 (50%), Gaps = 4/413 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +GK+ A+RL M KG P ++T +++GL + GL+ A L EM E+ PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK-LFNEMAEWNVKPN 541
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
VTYN +I+GYC + KA M + GI P+ + L+H LC G EAK ++
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ + ++ + + T + + + + +A S+ EM Q +++D+V Y VLI+G K+
Sbjct: 602 GLHKGNCELNE-ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ L +G EM +G+ PD Y +I A K G +EA I +M G VP+E++Y
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK-DVSNAILTRDLML 450
+I GLC + A+ L M VP + + +D+ + + D+ A+ + +L
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
K G+ N TYN LI + G I A L M+ G+ PD +TY +I C
Sbjct: 781 K-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
A++L M +KG RPD ++Y L+ C+ G +A E ++L+ GL+ ++
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 231/525 (44%), Gaps = 46/525 (8%)
Query: 103 VFNAL-DNMLKG-SLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAA 160
V+NAL D++ KG +++ + + KIGLR YS + + C GKL+ A
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMG--KIGLRPNDVTYSIL-----IDMFCRRGKLDTA 421
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+ MV G V+ +N ++NG CK G + A ++ EM+ P +VTY +L+
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA-EMINKKLEPTVVTYTSLMG 480
Query: 221 GYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI 280
GYC+ ++KAL LY M GI P+ T L+ L G +++A K+ E+ +
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK- 539
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P+ VT V ++ Y + + +AF EM + + D +Y LI+GLC + A +
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+ K + Y L+ +EGK EA + M + G+ D + Y V+I G
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+D LL M + + P +++ +ID + D A DLM+ G PN T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 461 YNALILAHVKSGNIYRAYSLKEEM-----------------------------------L 485
Y A+I K+G + A L +M +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
KGL + TYN+LI C + A +L M+ G PD I+YT ++ E C R + K
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
+A E + + + G+ D V L + C E KA L + L
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 211/481 (43%), Gaps = 41/481 (8%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKV-- 189
+ C+ + + + LC + K+ A+ +++ + K PDV T+ +V GLCKV
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 190 ---------------------------------GLMEKAHDWLVREMLEFGPLPNLVTYN 216
G +E+A + LV+ +++FG PNL YN
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN-LVKRVVDFGVSPNLFVYN 371
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
LI C +A L+ M G++PN VT +IL+ C G L A L E+++
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ +++ H K + A EM +E VV Y L+ G C +N
Sbjct: 432 GLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A EM KG+ P +T+ L+ L++ G R+A + M++ + P+ ++Y VMI
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC--KDVSNAILTRDLMLKFGV 454
G C + D+ +A E L M +VP + +I +G C S A + D + K
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI--HGLCLTGQASEAKVFVDGLHKGNC 608
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
N Y L+ + G + A S+ +EM+ +G+ D+V Y +LI + +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
L +EM +G +PD + YT ++ G+ KEA + ++ G + + V + N C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 575 K 575
K
Sbjct: 729 K 729
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 1/383 (0%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
LP + T + L+ G A+ L++ M GI+P+ ++ +LCE L AK+
Sbjct: 189 LPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKE 248
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
M+ + D+ ++V V +D K ++ +A + ++ ++ DVV Y L+ GL
Sbjct: 249 MIAHMEATGCDV-NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
CK Q + EML P + L+ L K GK EA ++ + G+ P+
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
Y +I LC R A+ L M + P + ++++ID++ R + A+
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
M+ G+ +V+ YN+LI H K G+I A EM+ K L P VVTY L+G C+
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
+ AL+L EM KG P + ++T L+ G ++A + + ++ + + + V +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 569 LFNMYCKLEEPVKAFNLFQDWLE 591
+ YC+ + KAF ++ E
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTE 570
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 131 GLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG 190
GL CE + + + C EGKLE A+ + + MVQ+G D+ + +++G K
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK-H 660
Query: 191 LMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC 250
K L++EM + G P+ V Y ++I +A ++ M + G PN VT
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ-AFSLWNEM 309
+++ LC+ G + EA+ + + + +P+ VT F+D K +Q A L N +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSK-MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
+ + + YN+LI G C+ + A M+ GV PD TY +I L +
Sbjct: 780 LKGLL-ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
++A + M++ GI PD ++Y +I G C ++ +A EL ML ++P
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 136/309 (44%), Gaps = 5/309 (1%)
Query: 288 VFMDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ + HY ++R + ++ M + S+ +V + L++GL K + LA +M+
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
G+ PD + Y +I +L + A ++ M G + + Y V+I GLC + +
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNAL 464
A + + + P + + ++ YG CK + + D ML P+ ++L
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLV--YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
+ K G I A +L + ++ G+ P++ YN LI + C R A L M + G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
RP+ ++Y+ L+ C RG A +++ +GL P L N +CK + A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 585 LFQDWLESK 593
+ + K
Sbjct: 459 FMAEMINKK 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 107 LDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRI 166
LD + KG ++ K + + +++K GL Y+ +R C +G++E A L
Sbjct: 759 LDILTKGEVDMQKAVELHNAILK-GLLANTATYNML-----IRGFCRQGRIEEASELITR 812
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M+ G PD T+ ++N LC+ ++KA + L M E G P+ V YNTLI G C
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIE-LWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 227 SVDKALYLYSSMADTGIQPNRVT 249
+ KA L + M G+ PN T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 226/440 (51%), Gaps = 7/440 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE-F 206
+R + G+LE + MV G +PD+ ++ G C++G KA L E+LE
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL--EILEGS 166
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G +P+++TYN +I GYC ++ AL + M+ + P+ VT N ++ +LC++G LK+A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQA 223
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L+ +L D PD++T T+ ++ ++ A L +EMR DVV YNVL+N
Sbjct: 224 MEVLDRMLQRDC-YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G+CK ++ A + +M G P+ T+NI++ ++ G+ +A +L M + G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
+++ ++I LC + RA ++L M + P + +N ++ + + K + AI
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ M+ G +P++ TYN ++ A K G + A + ++ +KG P ++TYN +I
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
A++L EM K +PD I+Y+ LV G EA + + + + G+ + V
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 567 QILFNMYCKLEEPVKAFNLF 586
+ CK + +A +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFL 542
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 190/376 (50%), Gaps = 2/376 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R LC GKL+ A+ + M+Q+ PDV T+ ++ C+ + A L+ EM + G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK-LLDEMRDRG 269
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P++VTYN L+ G C +D+A+ + M +G QPN +T NI++ ++C G +A+
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
K+L ++L P +VT + ++ + +A + +M Q+ + + ++YN L++G
Sbjct: 330 KLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
CK + M+ A Y M+ +G PD TYN ++ AL K+GK +A IL +S G P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
I+Y +I GL +A +LL M + P I ++ ++ R V AI
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ G+ PN T+N+++L KS RA M+ +G P+ +Y +LI
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 508 SHDFALQLRREMVQKG 523
AL+L E+ KG
Sbjct: 569 MAKEALELLNELCNKG 584
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 182/399 (45%), Gaps = 45/399 (11%)
Query: 173 LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
L DV ++NH+ + + G +E+ +L M+ G +P+++ TLI+G+C + KA
Sbjct: 100 LEDVESNNHLRQ-MVRTGELEEGFKFL-ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
+ + +G P+ +T N+++ C+ G + A +L+ + PD+VT +
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRS 213
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ + QA + + M Q DV+ Y +LI C++ + A EM +G PD
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
TYN+L+ + KEG+ EA L M G P+ I++ +++R +C + A++LL
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
ML+ G P+V T+N LI + G
Sbjct: 334 -----------------------------------DMLRKGFSPSVVTFNILINFLCRKG 358
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
+ RA + E+M G P+ ++YN L+ C + D A++ MV +G PD+++Y
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
++ C G ++A E ++ G PV I +N
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGC----SPVLITYN 453
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 2/287 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + H +R +C G+ A +L M++KGF P V T N ++N LC+ GL+ +A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
D L +M + G PN ++YN L+ G+C +D+A+ M G P+ VT N ++
Sbjct: 364 IDIL-EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
ALC++G +++A ++L + L+ P L+T +D K + +A L +EMR ++
Sbjct: 423 ALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
D + Y+ L+ GL + ++ A + E + G+ P+A T+N ++ L K +T A
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
L M G P+E SY ++I GL ++ A ELL + N ++ K
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 2/300 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
+R C + V +C EG+L+ AI+ M G P+V THN I+ +C G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
A L +ML G P++VT+N LI C + +A+ + M G QPN ++ N
Sbjct: 325 WMDAEKLLA-DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L+H C+ + A + LE +++ PD+VT + K+ + A + N++
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGC-YPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
++ YN +I+GL K A EM K + PD TY+ L+G L +EGK E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A +MGI P+ +++ ++ GLC R RA + L M+N P + ++I+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 3/304 (0%)
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
V S + + E + F M + D++ LI G C+ A
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
+ G +PD TYN++I K G+ A L V+ +M + PD ++Y ++R LC
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+ +A E+L ML P I + ++I+ R V +A+ D M G P+V TYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
L+ K G + A +M + G P+V+T+N+++ + C+ A +L +M++KG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAF 583
P ++++ L+ C +G A + K+ + G + + L + +CK ++ +A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 584 NLFQ 587
+
Sbjct: 400 EYLE 403
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
+ + G+ E L M G VPD I +IRG C +A ++L + + VP
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
I +N++I Y + +++NA+ D M V P+V TYN ++ + SG + +A + +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
ML + +PDV+TY +LI A C A++L EM +G PD+++Y LV C G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
EA + + SG + + I+ C + A L D L
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 198/385 (51%), Gaps = 2/385 (0%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
DV++ ++ G C+ G +EK+ D L+ E+ EFG PN+V Y TLI G C ++KA L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLI-ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ M G+ N T +L++ L +NG K+ +M E+ + +D P+L T M+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK-MQEDGVFPNLYTYNCVMNQLC 279
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K+ AF +++EMR+ + ++V YN LI GLC+ +N A +M G+ P+
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
TYN LI GK +A + + G+ P ++Y +++ G C D A +++ M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ P + + ++ID + R ++ AI R M + G+ P+V TY+ LI G +
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A L + M+ K P+ V YN +I C S AL+L +EM +K P++ SY +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 535 VRESCIRGNTKEAEERYAKILKSGL 559
+ C +KEAE K++ SG+
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGI 544
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 205/429 (47%), Gaps = 3/429 (0%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
MV GF+P N+++ + VG W + + ++ ++ LIKG C
Sbjct: 120 MVDNGFVPGSNCFNYLLTFV--VGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAG 177
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++K+ L + + G PN V L+ C+ G +++AK + E + + + T
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE-MGKLGLVANERTY 236
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV ++ FKN Q F ++ +M+++ + ++ YN ++N LCK+ A+ EM +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+GV + TYN LIG L +E K EA ++ M GI P+ I+Y +I G C + +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A L + + + P + +N+++ + R D S A M + G+ P+ TY LI
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+S N+ +A L+ M GL PDV TY++LI C + A +L + MV+K P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ + Y ++ C G++ A + ++ + L + + + + CK + +A L
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 587 QDWLESKRD 595
+ ++S D
Sbjct: 537 EKMIDSGID 545
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 6/350 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G++E A L M + G + + T+ ++NGL K G+ ++ + + +M E G PN
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE-MYEKMQEDGVFPN 267
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
L TYN ++ C A ++ M + G+ N VT N L+ LC L EA K+++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ +D + P+L+T +D + + +A SL +++ + +V YN+L++G C+
Sbjct: 328 QMKSDGIN-PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A EM ++G+ P TY ILI + +A + M ++G+VPD +Y
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN--AILTRDLM 449
V+I G C + A L M+ P +++N +I G CK+ S+ A+ M
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI--LGYCKEGSSYRALKLLKEM 504
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ + PNV +Y +I K A L E+M+ G+ P +L+
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 150/280 (53%), Gaps = 4/280 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC +G+ + A ++ M ++G ++ T+N ++ GLC+ + +A+ +V +M G P
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK-VVDQMKSDGINP 336
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
NL+TYNTLI G+C V + KAL L + G+ P+ VT NILV C G A KM+
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 271 EEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+E+ +++ I P VT T+ +D + ++ +A L M + + DV Y+VLI+G C
Sbjct: 397 KEM--EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
MN A M++K P+ YN +I KEG + A +L M + + P+
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
SY+ MI LC +R A+ L+ M+++ + P + +LI
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 9/347 (2%)
Query: 112 KGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKG 171
KG +E+ K + + K+GL A E +YT + L G + + M + G
Sbjct: 211 KGEIEKAKDLF--FEMGKLGL--VANERTYT---VLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 172 FLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKA 231
P+++T+N ++N LCK G + A + EM E G N+VTYNTLI G C +++A
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQ-VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 232 LYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMD 291
+ M GI PN +T N L+ C G L +A + + L P LVT + +
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD-LKSRGLSPSLVTYNILVS 381
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
+ + + A + EM + ++ V Y +LI+ ++ M A M + G++P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
D TY++LI +G+ EA + M + P+E+ Y MI G C + RA +LL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
M + P + +I++ + + A + M+ G+ P+
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 34/305 (11%)
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLP----------------------------- 351
Y V+IN ++Q +NL+ Y EM+ G +P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 352 -----DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
D +++ ILI + G+ ++ +L +++ G P+ + Y +I G C +I +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
AK+L + M +V + ++I+ + + M + GV PN++TYN ++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
K G A+ + +EM +G+ ++VTYN LIG C + A ++ +M G P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+LI+Y L+ C G +A + GL V IL + +C+ + A +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 587 QDWLE 591
++ E
Sbjct: 397 KEMEE 401
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 103 VFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIR 162
F DNM K RL S+ ++GL YS H C++G++ A R
Sbjct: 417 TFARSDNMEKAIQLRL-------SMEELGLVPDVHTYSVLIHG-----FCIKGQMNEASR 464
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
L + MV+K P+ +N ++ G CK G +A L++EM E PN+ +Y +I+
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK-LLKEMEEKELAPNVASYRYMIEVL 523
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
C +A L M D+GI P+ +++ A
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 224/425 (52%), Gaps = 8/425 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL- 209
L L K A+ L MV +G PD+FT+ +VNGLCK G ++ A L + +E G +
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK--MEKGKIE 252
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
++V Y T+I C +V+ AL L++ M + GI+PN VT N L+ LC G +A ++
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L +++ + K P++VT + +D + K + ++A L++EM + S++ D+ Y+ LING C
Sbjct: 313 LSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ ++ A M+ K P+ TYN LI K + E + MS+ G+V + +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRD 447
+Y +I+GL D A+++ M+++ + P I +++++D G CK + A++ +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD--GLCKYGKLEKALVVFE 489
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ K + P+++TYN +I K+G + + L + KG+ P+V+ Y +I C
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ A L REM + G P+ +Y L+R G+ + E ++ G + D +
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 568 ILFNM 572
++ NM
Sbjct: 610 MVINM 614
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 220/467 (47%), Gaps = 4/467 (0%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRL--LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVN 184
++ +G R SY ++ + + C +L A+ + M++ G+ PD+ T + ++N
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 158
Query: 185 GLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ 244
G C + +A LV +M PN VT+NTLI G N +A+ L M G Q
Sbjct: 159 GYCHGKRISEAV-ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 217
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
P+ T +V+ LC+ G + A +L++ + K D+V T +D + A +
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
L+ EM + +VV YN LI LC + A +M+++ + P+ T++ LI A
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
KEGK EA + M K I PD +Y +I G C + AK + M++ P +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
+N +I + + K V + M + G+ N TYN LI ++G+ A + ++M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
++ G+ PD++TY++L+ C + AL + + + PD+ +Y ++ C G
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
++ + + + G+ + + + + +C+ +A LF++ E
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 226/479 (47%), Gaps = 5/479 (1%)
Query: 116 ERLKMMRENISLVKI-GLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP 174
+R +R+ L + G+ A Y Y E + R + L+ KL+ A+ L MVQ LP
Sbjct: 21 KRFAQLRKASPLFSLRGVYFSAASYDYREKLS--RNVLLDLKLDDAVDLFGEMVQSRPLP 78
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
+ N +++ + K+ + L M +L +YN LI +C + + AL +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
M G +P+ VT + L++ C + EA +++++ + P+ VT + F
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ-PNTVTFNTLIHGLF 196
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
+ + +A +L + M + D+ Y ++NGLCK ++LA +M K + D
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
Y +I AL +A + M GI P+ ++Y +IR LC A LL M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ + P + ++ +ID + + + A D M+K + P++FTY++LI +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A + E M++K FP+VVTYN LI C + + ++L REM Q+G + ++Y L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
++ G+ A++ + K++ G+ D + IL + CK + KA +F+ +SK
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 37/289 (12%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + EGKL A +L M+++ PD+FT++ ++NG C +++A + M+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-HMFELMI 387
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
PN+VTYNTLIKG+C V++ + L+ M+ G+ N VT N L+ L + G
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
A+K+ +++++D PD++T ++ +D K + +A ++ ++++ ME D+ YN++
Sbjct: 448 MAQKIFKKMVSDGVP-PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 325 INGLCKNQLMNLAYGYAC-----------------------------------EMLKKGV 349
I G+CK + + C EM + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
LP++ TYN LI A ++G + ++ M G V D + ++I L
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 116 ERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPD 175
E +++ RE + + GL G Y+ ++ L G + A ++ + MV G PD
Sbjct: 413 EGMELFRE---MSQRGLVGNTVTYN-----TLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 176 VFTHNHIVNGLCKVGLMEKA---HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
+ T++ +++GLCK G +EKA ++L + +E P++ TYN +I+G C V+
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKME----PDIYTYNIMIEGMCKAGKVEDGW 520
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
L+ S++ G++PN + ++ C G +EA + E + +D +P+ T +
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE-MKEDGTLPNSGTYNTLIRA 579
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ + + L EMR D +++IN L +L
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRL 620
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C GK+E L + KG P+V + +++G C+ GL E+A D L REM E G LP
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA-DALFREMKEDGTLP 568
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
N TYNTLI+ + L M G + T +++++ L +G L+++
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 225/425 (52%), Gaps = 8/425 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL- 209
L L K A+ L MVQ+G PD+ T+ +VNGLCK G ++ A L + +E G +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK--MEKGKIE 255
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
++V YNT+I G C +D AL L++ M + GI+P+ T + L+ LC G +A ++
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L +++ + K P++VT + +D + K + ++A L++EM + S++ D+ Y+ LING C
Sbjct: 316 LSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ ++ A M+ K P+ TY+ LI K + E + MS+ G+V + +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRD 447
+Y +I G RD A+ + M++ + P + +N+++D G CK+ ++ A++ +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD--GLCKNGKLAKAMVVFE 492
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ + + P+++TYN +I K+G + + L + KG+ P+V+ YN +I C
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
S + A L ++M + G P+ +Y L+R G+ + + E ++ G D +
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612
Query: 568 ILFNM 572
++ NM
Sbjct: 613 LVTNM 617
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 2/431 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K E I L M G D++T++ +N C+ + A L + M++ G P++VT
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK-MMKLGYEPDIVTL 156
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
++L+ GYC + A+ L M + G +P+ T L+H L + EA ++++++
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PDLVT ++ K + A SL +M + +E DVV YN +I+GLCK + M+
Sbjct: 217 RGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KG+ PD FTY+ LI L G+ +A +L M + I P+ +++ +I
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ +V A++L M+ + P ++ +I+ + + A +LM+
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
PNV TY+ LI K+ + L EM +GL + VTY LI R D A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
++MV G P++++Y L+ C G +A + + +S + D I+ CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 576 LEEPVKAFNLF 586
+ + LF
Sbjct: 516 AGKVEDGWELF 526
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 239/554 (43%), Gaps = 39/554 (7%)
Query: 40 QIFGSEHDIIEHASFCGRICWEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKG 99
Q G+ + + CG CWE +S +Y R + D + D+ K
Sbjct: 19 QGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS 77
Query: 100 QHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEA 159
+ N L ++ ++ ISL + ++ + ++ + C +L
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGE-QMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
A+ + M++ G+ PD+ T + ++NG C + A LV +M+E G P+ T+ TLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV-ALVDQMVEMGYKPDTFTFTTLI 195
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
G N +A+ L M G QP+ VT +V+ LC+ G + A +L++ + K
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK-MEKGKI 254
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
D+V +D K + A +L+ EM + DV Y+ LI+ LC + A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
+M+++ + P+ T++ LI A KEGK EA + M K I PD +Y +I G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK---------------------- 437
+ AK + M++ P + ++ +I + + K
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 438 -------------DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
D NA + M+ GVHPN+ TYN L+ K+G + +A + E +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
+ PD+ TYN++I C + +L + KG P++I+Y ++ C +G+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 545 KEAEERYAKILKSG 558
+EA+ K+ + G
Sbjct: 555 EEADSLLKKMKEDG 568
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 207/432 (47%), Gaps = 2/432 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K++ A+ L MV+ P + N +++ + K+ E L +M G +L TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYTY 121
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+ I +C + + AL + + M G +P+ VT + L++ C + + +A ++++++
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PD T T + F + + +A +L ++M Q + D+V Y ++NGLCK ++
Sbjct: 182 MGYK-PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
LA +M K + D YN +I L K +A + M GI PD +Y +I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
LC A LL M+ + P + ++ +ID + + + A D M+K +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
P++FTY++LI + A + E M++K FP+VVTY+ LI C + + ++L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
REM Q+G + ++YT L+ + A+ + +++ G+ + + IL + CK
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 576 LEEPVKAFNLFQ 587
+ KA +F+
Sbjct: 481 NGKLAKAMVVFE 492
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 142/267 (53%), Gaps = 2/267 (0%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + EGKL A +L M+++ PD+FT++ ++NG C +++A + M+
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-HMFELMI 390
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
PN+VTY+TLIKG+C V++ + L+ M+ G+ N VT L+H +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
A+ + +++++ P+++T + +D KN + +A ++ +++++ME D+ YN++
Sbjct: 451 NAQMVFKQMVSVGVH-PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I G+CK + + C + KGV P+ YN +I ++G EA +L M + G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELL 411
+P+ +Y +IR D D + EL+
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELI 596
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 1/361 (0%)
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
VD A+ L+ M + P+ V N L+ A+ + E L E + DL T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-ELVISLGEQMQTLGISHDLYTYS 122
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
+F++ + + + A ++ +M + E D+V + L+NG C ++ ++ A +M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G PD FT+ LI L+ K EA ++ M + G PD ++Y ++ GLC DI A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
LL M + +++N IID + K + +A+ M G+ P+VFTY++LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
G A L +M+ + + P+VVT++ LI A A +L EM+++ PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
+ +Y+ L+ C+ EA+ + ++ + V L +CK + + LF+
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 588 D 588
+
Sbjct: 423 E 423
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 133/295 (45%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A L+ +M ++ +V +N L++ + K L +M G+ D +TY+I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + A +L M K+G PD ++ ++ G C + I A L+ M+
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + +I S A+ D M++ G P++ TY ++ K G+I A SL
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
++M + DVV YN +I C + D AL L EM KG RPD+ +Y+ L+ C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
G +A + +++ + + V L + + K + V+A L+ + ++ D
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C GK+E L + KG P+V +N +++G C+ G E+A D L+++M E GPLP
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA-DSLLKKMKEDGPLP 571
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
N TYNTLI+ + + L M G + T ++ + L +G L ++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 217/440 (49%), Gaps = 41/440 (9%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G+ PD T + +VNG C G + +A LV M+E P+LVT +TLI G C V +
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVF 289
AL L M + G QP+ VT +++ LC++G+ A + ++ ++++I +V ++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM--EERNIKASVVQYSIV 251
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+D K+ F A SL+NEM ++ DVV Y+ LI GLC + + EM+ + +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
+PD T++ LI KEGK EA + M GI PD I+Y +I G C + + A +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAH 468
+ M++ P + ++++I+ Y + K V + + L R++ K G+ PN TYN L+L
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGF 430
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVT--------------------------------- 495
+SG + A L +EM+++G+ P VVT
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 496 --YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
YN++I CN D A L + KG +PD+++Y ++ C +G+ EA+ + K
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 554 ILKSGLMNDHVPVQILFNMY 573
+ + G D IL +
Sbjct: 551 MKEDGCTPDDFTYNILIRAH 570
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 202/423 (47%), Gaps = 37/423 (8%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G D++T ++N C+ + A L R + G P+ +T++TL+ G+C V +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW-KLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A+ L M + +P+ VT + L++ LC G + EA +++ ++ PD VT +
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ-PDEVTYGPVL 217
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ K+ A L+ +M + +++ VV Y+++I+ LCK+ + A EM KG+
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
D TY+ LIG L +GK + +L M I+PD +++ +I + ++ AKEL
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
N ++TR G+ P+ TYN+LI K
Sbjct: 338 Y-----------------------------NEMITR------GIAPDTITYNSLIDGFCK 362
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
++ A + + M++KG PD+VTY++LI + C + D ++L RE+ KG P+ I+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
Y LV C G A+E + +++ G+ V IL + C E KA +F+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 591 ESK 593
+S+
Sbjct: 483 KSR 485
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 2/267 (0%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + + EGKL A L M+ +G PD T+N +++G CK + +A+ + M+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ-MFDLMV 377
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
G P++VTY+ LI YC VD + L+ ++ G+ PN +T N LV C++G L
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
AK++ +E+++ P +VT + +D N E +A ++ +M+++ M + + YN++
Sbjct: 438 AAKELFQEMVSRGVP-PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I+G+C ++ A+ C + KGV PD TYN++IG L K+G EA + M + G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELL 411
PD+ +Y ++IR ++ + EL+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELI 583
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 194/429 (45%), Gaps = 76/429 (17%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LCL+G++ A+ L MV+ GF PD T+ ++N LCK G A D L R+M E
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD-LFRKMEERNIKA 243
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V Y+ +I C S D AL L++ M GI+ + VT + L+ LC +G + KML
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E++ + IPD+VT + +D + K + ++A L+NEM + D + YN LI+G CK
Sbjct: 304 REMIGRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 331 -------NQLMNLAYGYACE----------------------------MLKKGVLPDAFT 355
NQ+ +L CE + KG++P+ T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL----- 410
YN L+ + GK A + M G+ P ++Y +++ GLC + ++ +A E+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 411 -----------------------------LWCMLNNLMV-PKPIVWNLIIDLYGRCK--D 438
L+C L++ V P + +N++I G CK
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG--GLCKKGS 540
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+S A + M + G P+ FTYN LI AH+ + + L EEM G D T +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 499 LIGAACNLR 507
+I + R
Sbjct: 601 VIDMLSDRR 609
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%)
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
I ++SYK +R D + A +L M+ + +P PI +N + R K
Sbjct: 31 ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY---- 86
Query: 444 LTRDLMLKF-------GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
DL+L F G+ +++T +I + + + A+S+ G PD +T+
Sbjct: 87 ---DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF 143
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
+ L+ C A+ L MV+ RPDL++ + L+ C++G EA ++++
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
G D V + N CK A +LF+ E
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 227/448 (50%), Gaps = 11/448 (2%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
+V++G R ++ H L L K A+ L MVQ+G P++ T+ +VNGL
Sbjct: 106 MVEMGYRPDTITFTTLIHG-----LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
CK G ++ A + L+ +M ++V +NT+I C VD AL L+ M GI+PN
Sbjct: 161 CKRGDIDLAFN-LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
VT + L+ LC G +A ++L +++ + K P+LVT +D + K +F++A L
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
++M + S++ D+ YN LING C + ++ A M+ K PD TYN LI K
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
+ + + MS G+V D ++Y +I+GL D D A+++ M+++ + P + +
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 427 NLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
++++D G C + + A+ D M K + +++ Y +I K+G + + L +
Sbjct: 399 SILLD--GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
KG+ P+VVTYN +I C+ R A L ++M + G PD +Y L+R G+
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNM 572
+ E ++ + D + ++ NM
Sbjct: 517 AASAELIREMRSCRFVGDASTIGLVANM 544
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 207/444 (46%), Gaps = 2/444 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ C ++ A+ L M++ G+ P + T + ++NG C + A LV +M+E G
Sbjct: 52 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMG 110
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ +T+ TLI G N +A+ L M G QPN VT ++V+ LC+ G + A
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+L + + K D+V +D K R A +L+ EM + +VV Y+ LI+
Sbjct: 171 NLLNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LC + A +M++K + P+ T+N LI A KEGK EA + M K I PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+Y +I G C + +AK++ M++ P +N +I + + K V +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M G+ + TY LI G+ A + ++M++ G+ PD++TY++L+ CN
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ AL++ M + + D+ YT ++ C G + + + + G+ + V
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 568 ILFNMYCKLEEPVKAFNLFQDWLE 591
+ + C +A+ L + E
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKE 493
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%)
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+ +N L++ + K + +L +M + G+ + +TYNILI + + A +LG
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M K+G P ++ ++ G C + I A L+ M+ P I + +I
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
S A+ D M++ G PN+ TY ++ K G+I A++L +M + DVV +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
+I + C R D AL L +EM KG RP++++Y+ L+ C G +A + + +++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 558 GLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+ + V L + + K + V+A L D ++ D
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 4/312 (1%)
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+ +P + + K ++F SL +M++ + ++ YN+LIN C+ ++LA
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+M+K G P T + L+ + +A ++ M +MG PD I++ +I G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVH 455
L A L+ M+ P + + ++++ G CK D+ A + M +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+V +N +I + K ++ A +L +EM TKG+ P+VVTY+ LI C+ A QL
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
+M++K P+L+++ L+ G EAE+ + ++K + D L N +C
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 576 LEEPVKAFNLFQ 587
+ KA +F+
Sbjct: 303 HDRLDKAKQMFE 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%)
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
M+ + +P +N ++ + K I + M + G+ N++TYN LI +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
I A +L +M+ G P +VT + L+ C+ + A+ L +MV+ G+RPD I++T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
L+ + EA ++++ G + V ++ N CK + AFNL +K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 231/449 (51%), Gaps = 10/449 (2%)
Query: 130 IGLRGYACEYSYTEHAAT----VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNG 185
+ L G E Y + T + L + A+ L MV KG PD+ T+ +VNG
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 186 LCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQP 245
LCK G ++ A L+++M + P +V YNT+I C +V+ AL L++ M + GI+P
Sbjct: 231 LCKRGDIDLALS-LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 246 NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSL 305
N VT N L+ LC G +A ++L +++ + K P++VT + +D + K + ++A L
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 306 WNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK 365
++EM + S++ D+ Y+ LING C + ++ A M+ K P+ TYN LI K
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 366 EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIV 425
+ E + MS+ G+V + ++Y +I G R+ A+ + M+++ ++P +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 426 WNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+++++D G C + V A++ + + + + P+++TYN +I K+G + + L
Sbjct: 469 YSILLD--GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
+ KG+ P+VVTY ++ C + A L REM ++G PD +Y L+R G+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNM 572
+ E ++ + D + ++ NM
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVTNM 615
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/581 (24%), Positives = 255/581 (43%), Gaps = 23/581 (3%)
Query: 15 HLFPSHNVFQRFLNSAIQSIQQCVAQIFGSEHDIIEHASFCGRICWEEDMGLSSTNYLMS 74
LF + RF++ ++ +C G+ H SF W D +Y
Sbjct: 3 RLFAISSTGNRFVHRSLLGKGKC-----GTAPPSFSHCSF-----WVRDFSGVRYDYRKI 52
Query: 75 AIGRNCQLNSKDCSSY--DMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIG- 131
+I R L D + DM F+ L L + M + ++ +G
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKL-------LSAIAKMNKFDLVISLGE 105
Query: 132 -LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG 190
++ ++ ++ + C +L A+ + M++ G+ PD+ T N ++NG C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 191 LMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC 250
+ A LV +M+E G P+ T+NTLI G N +A+ L M G QP+ VT
Sbjct: 166 RISDAVS-LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
I+V+ LC+ G + A +L++ + K P +V +D + A +L+ EM
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKK-MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
+ +VV YN LI LC + A +M+++ + P+ T++ LI A KEGK
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
EA + M K I PD +Y +I G C + AK + M++ P + +N +I
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
+ + K V + M + G+ N TY LI ++ A + ++M++ G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
PD++TY++L+ CN + AL + + + PD+ +Y ++ C G ++ +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ + G+ + V + + +C+ +A LF++ E
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A +L+ +M ++ +V ++ L++ + K +L +M G+ + +TY+ILI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + A +L M K+G PD ++ ++ G C I A L+ M+
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P +N +I R S A+ D M+ G P++ TY ++ K G+I A SL
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
++M + P VV YN +I A CN ++ + AL L EM KG RP++++Y L+R C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
G +A + +++ + + V L + + K + V+A L+ + ++ D
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 227/448 (50%), Gaps = 11/448 (2%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
+V++G R ++ H L L K A+ L MVQ+G P++ T+ +VNGL
Sbjct: 181 MVEMGYRPDTITFTTLIHG-----LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
CK G + A + L+ +M ++V +NT+I C VD AL L+ M GI+PN
Sbjct: 236 CKRGDTDLALN-LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
VT + L+ LC G +A ++L +++ + K P+LVT +D + K +F++A L+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
++M + S++ D+ YN L+NG C + ++ A M+ K PD TYN LI K
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
+ + + MS G+V D ++Y +I+GL D D A+++ M+++ + P + +
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 427 NLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
++++D G C + + A+ D M K + +++ Y +I K+G + + L +
Sbjct: 474 SILLD--GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
KG+ P+VVTYN +I C+ R A L ++M + G P+ +Y L+R G+
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNM 572
+ E ++ + D + ++ NM
Sbjct: 592 AASAELIREMRSCRFVGDASTIGLVANM 619
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 207/444 (46%), Gaps = 2/444 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ C ++ A+ L M++ G+ P + T + ++NG C + A LV +M+E G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMG 185
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ +T+ TLI G N +A+ L M G QPN VT ++V+ LC+ G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+L + + K D+V +D K R A +L+ EM + +VV Y+ LI+
Sbjct: 246 NLLNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LC + A +M++K + P+ T+N LI A KEGK EA + M K I PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+Y ++ G C + +AK++ M++ P + +N +I + + K V +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M G+ + TY LI G+ A + ++M++ G+ PD++TY++L+ CN
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ AL++ M + + D+ YT ++ C G + + + + G+ + V
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 568 ILFNMYCKLEEPVKAFNLFQDWLE 591
+ + C +A+ L + E
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKE 568
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A L+ M ++ +V +N L++ + K + ++ +M + ++ +TYNILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + A +LG M K+G P ++ ++ G C + I A L+ M+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P I + +I S A+ D M++ G PN+ TY ++ K G+ A +L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+M + DVV +N +I + C R D AL L +EM KG RP++++Y+ L+ C
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
G +A + + +++ + + V L + + K + V+A L+ D ++ D
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 227/438 (51%), Gaps = 6/438 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
KL A +++ G+ PD N ++NGLC + +A + LV M+E G P L+T
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE-LVDRMVEMGHKPTLITL 196
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
NTL+ G C V A+ L M +TG QPN VT +++ +C++G A ++L ++
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-- 254
Query: 276 DDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
++++I D V ++ +D K+ AF+L+NEM + D++ YN LI G C
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ +M+K+ + P+ T+++LI + KEGK REA +L M + GI P+ I+Y +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFG 453
I G C + + A +++ M++ P + +N++I+ Y + + + + L R++ L+ G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-G 433
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
V N TYN L+ +SG + A L +EM+++ + PD+V+Y +L+ C+ + AL
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
++ ++ + D+ Y ++ C +A + + + G+ D I+ +
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 574 CKLEEPVKAFNLFQDWLE 591
C+ + KA LF+ E
Sbjct: 554 CRKDSLSKADILFRKMTE 571
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 217/429 (50%), Gaps = 2/429 (0%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
E + L + M KG ++T + ++N C+ + A + + +++ G P+ V +NT
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK-IMKLGYEPDTVIFNT 163
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
L+ G C V +AL L M + G +P +T N LV+ LC NG + +A +++ ++
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P+ VT ++ K+ + A L +M + ++++D V Y+++I+GLCK+ ++ A
Sbjct: 224 FQ-PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+ EM KG D TYN LIG G+ + +L M K I P+ +++ V+I
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+ + A +LL M+ + P I +N +ID + + + AI DLM+ G P+
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ T+N LI + K+ I L EM +G+ + VTYN L+ C + A +L +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
EMV + RPD++SY L+ C G ++A E + KI KS + D I+ + C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 578 EPVKAFNLF 586
+ A++LF
Sbjct: 523 KVDDAWDLF 531
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 211/446 (47%), Gaps = 6/446 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LCL GK+ A+ L MV+ GF P+ T+ ++N +CK G A + L+R+M E
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME-LLRKMEERNIKL 261
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ V Y+ +I G C S+D A L++ M G + + +T N L+ C G + K+L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+++ K P++VT +V +D + K + +A L EM Q + + + YN LI+G CK
Sbjct: 322 RDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ A M+ KG PD T+NILI K + + + MS G++ + ++
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +++G C + AK+L M++ + P + + +++D ++ A+ +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
K + ++ Y +I + + A+ L + KG+ D YN++I C S
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A L R+M ++GH PD ++Y L+R + A E ++ SG D V+++
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 571 NMYCKLEEPVKAFNLFQDWLESKRDS 596
NM E F D L + R S
Sbjct: 621 NMLSSGELDKS----FLDMLSTTRAS 642
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+ +P ++ K +++ +L +M + + +++IN C+ + ++ A
Sbjct: 83 RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+ +++K G PD +N L+ L E + EA ++ M +MG P I+ ++ G
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
LC + + A L+ M+ P + + ++++ + + A+ M + + +
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
Y+ +I K G++ A++L EM KG D++TYN LIG CN D +L R
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK-- 575
+M+++ P++++++ L+ G +EA++ ++++ G+ + + L + +CK
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 576 -LEEPVKAFNL 585
LEE ++ +L
Sbjct: 383 RLEEAIQMVDL 393
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 214/440 (48%), Gaps = 4/440 (0%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+G +E A L M KGF P V+T+N ++NGLCK G E+A + EML G P+
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA-EMLRSGLSPDST 341
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY +L+ C V + ++S M + P+ V + ++ +G+L +A +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ IPD V T+ + Y + A +L NEM Q +DVV YN +++GLCK ++
Sbjct: 402 -KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A EM ++ + PD++T ILI K G + A + M + I D ++Y
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ G DI AKE+ M++ ++P PI ++++++ ++ A D M+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR--SHDF 511
+ P V N++I + +SGN S E+M+++G PD ++YN LI S F
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
L + E Q G PD+ +Y ++ C + KEAE K+++ G+ D + N
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 572 MYCKLEEPVKAFNLFQDWLE 591
+ + +AF + + L+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQ 720
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 216/439 (49%), Gaps = 2/439 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G +E A + + + + G +V+T N +VN LCK G MEK +L ++ E G P++VT
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL-SQVQEKGVYPDIVT 272
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNTLI Y + +++A L ++M G P T N +++ LC++G + AK++ E+L
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
PD T + K + ++ ++++MR + D+V ++ +++ ++ +
Sbjct: 333 RSGLS-PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A Y + + G++PD Y ILI ++G A + M + G D ++Y +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
+ GLC + + A +L M + P ++ID + + ++ NA+ M + +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
+V TYN L+ K G+I A + +M++K + P ++Y++L+ A C+ A +
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ EM+ K +P ++ +++ C GN + E K++ G + D + L +
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 575 KLEEPVKAFNLFQDWLESK 593
+ E KAF L + E +
Sbjct: 632 REENMSKAFGLVKKMEEEQ 650
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 187/378 (49%), Gaps = 4/378 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G + ++ M + +PD+ + +++ + G ++KA + + E G +P+
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF-NSVKEAGLIPD 409
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
V Y LI+GYC + A+ L + M G + VT N ++H LC+ L EA K+
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E + + PD T T+ +D + K A L+ +M++ + +DVV YN L++G K
Sbjct: 470 E-MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
++ A +M+ K +LP +Y+IL+ AL +G EA + M I P +
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA--ILTRDLM 449
MI+G C + + L M++ VP I +N +I + R +++S A ++ +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
+ G+ P+VFTYN+++ + + A + +M+ +G+ PD TY +I + +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 510 DFALQLRREMVQKGHRPD 527
A ++ EM+Q+G PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 208/463 (44%), Gaps = 19/463 (4%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + +L G+L A M+++ + + N + + G + D L+R +
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 205 EF----------------GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRV 248
+ G ++ N LI + V+ A +Y ++ +G+ N
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWN 307
T NI+V+ALC++G +++ L ++ +K + PD+VT + Y +AF L N
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQV--QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
M V YN +INGLCK+ A EML+ G+ PD+ TY L+ K+G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
E + M +VPD + + M+ ++ +A + ++P +++
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
++I Y R +S A+ R+ ML+ G +V TYN ++ K + A L EM +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 488 GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
LFPD T +LI C L + A++L ++M +K R D+++Y L+ G+ A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 548 EERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
+E +A ++ ++ + IL N C +AF ++ + +
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 203/451 (45%), Gaps = 22/451 (4%)
Query: 164 QRIMVQKGFLPDVFTHNHI-----VNGLCKVGLMEKAHDWLVREMLEFGPL--------- 209
QR + Q GF F H + ++ L + G + A L+R + G
Sbjct: 96 QRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLD 155
Query: 210 -------PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
N ++ LI+ Y + +A ++ + G + CN L+ +L G
Sbjct: 156 STFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW 215
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
++ A + +EI I ++ T + ++ K+ + + + +++++ + D+V YN
Sbjct: 216 VELAWGVYQEISRSGVGI-NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
LI+ LM A+ M KG P +TYN +I L K GK A + M +
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G+ PD +Y+ ++ C D+V +++ M + +VP + ++ ++ L+ R ++ A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
++ + + + G+ P+ Y LI + + G I A +L+ EML +G DVVTYN ++
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
C + A +L EM ++ PD + T L+ C GN + A E + K+ + + D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 563 HVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
V L + + K+ + A ++ D + +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C + + LC L A +L M ++ PD +T +++G CK+G ++ A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ L ++M E ++VTYNTL+ G+ V +D A +++ M I P ++ +ILV+
Sbjct: 500 ME-LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 256 ALCENGHLKEAKKMLEEILNDDKD----------------------------------IP 281
ALC GHL EA ++ +E+++ + +P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMR--QNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
D ++ + + + +AF L +M Q + DV YN +++G C+ M A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
+M+++GV PD TY +I + EA I M + G PD+
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 218/424 (51%), Gaps = 9/424 (2%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
L L K A+ L MVQ+G PD+ T+ +VNGLCK G ++ A + L+ +M
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN-LLNKMEAARIKA 256
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+V +NT+I C V+ A+ L++ M GI+PN VT N L++ LC G +A ++L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+L + K P++VT +D +FK + ++A L EM Q S++ D + YN+LING C
Sbjct: 317 SNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ ++ A M+ K LP+ TYN LI K + + + MS+ G+V + ++
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDL 448
Y +I+G D A+ + M++N VP I+ I+ L+G C + A++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSN-RVPTDIMTYSIL-LHGLCSYGKLDTALVIFKY 493
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+ K + N+F YN +I K+G + A+ L + K PDVVTYN +I C+ R
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRL 550
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
A L R+M + G P+ +Y L+R + + + E ++ SG + D + +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 569 LFNM 572
+ NM
Sbjct: 611 VTNM 614
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 4/515 (0%)
Query: 40 QIFGSEHDIIEHASFCGRICWEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKG 99
Q G+ + + CG CWE +S +Y R + D + D+ K
Sbjct: 19 QGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVD-DAVDLFGDMVKS 77
Query: 100 QHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEA 159
+ N L ++ ++ ISL + ++ + ++ + C +L
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGE-QMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
A+ + M++ G+ PD+ T + ++NG C + A LV +M+E G P+ T+ TLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV-ALVDQMVEMGYKPDTFTFTTLI 195
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
G N +A+ L M G QP+ VT +V+ LC+ G + A +L + + +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK-MEAARI 254
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
++V +D K R A L+ EM + +VV YN LIN LC + A
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
ML+K + P+ T+N LI A +KEGK EA + M + I PD I+Y ++I G C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
+ AK++ M++ +P +N +I+ + +CK V + + M + G+ N
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
TY +I ++G+ A + ++M++ + D++TY++L+ C+ D AL + + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
+ ++ Y ++ C G EA + + +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
A L+ +M ++ +V +N L++ + K L +M G+ D +TY+I I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ + A +L M K+G PD ++ ++ G C + I A L+ M+ P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ +I S A+ D M++ G P++ TY ++ K G+I A +L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+M + +VV +N +I + C R + A+ L EM KG RP++++Y L+ C
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
G +A + +L+ + + V L + + K + V+A L ++ ++ D
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 221/455 (48%), Gaps = 8/455 (1%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C + + + +R+ EG ++ ++ + R+M GF P V+T N I+ + K G E
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG--EDVS 216
Query: 197 DW-LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
W ++EML+ P++ T+N LI C S +K+ YL M +G P VT N ++H
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
C+ G K A ++L+ + + D D+ T + + ++ + + L +MR+ +
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVD-ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
+ V YN LING + +A EML G+ P+ T+N LI EG +EA +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
+M G+ P E+SY V++ GLC + + A+ M N + I + +ID G
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID--GL 453
Query: 436 CKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
CK+ + A++ + M K G+ P++ TY+ALI K G A + + GL P+
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
+ Y+ LI C + A+++ M+ +GH D ++ LV C G EAEE
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+ G++ + V L N Y E +KAF++F +
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 221/493 (44%), Gaps = 53/493 (10%)
Query: 102 AVFNALDNML--KGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEA 159
A FN L N+L +GS E+ + + K+ GYA + + + C +G+ +A
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQ-----KMEKSGYA--PTIVTYNTVLHWYCKKGRFKA 286
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
AI L M KG DV T+N +++ LC+ + K + L+R+M + PN VTYNTLI
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY-LLLRDMRKRMIHPNEVTYNTLI 345
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
G+ V A L + M G+ PN VT N L+ G+ KEA KM ++
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAKGL 404
Query: 280 IPDLVTSTVFMDHYFKNREFI-----------------------------------QAFS 304
P V+ V +D KN EF +A
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
L NEM ++ ++ D+V Y+ LING CK A C + + G+ P+ Y+ LI
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
+ G +EA I M G D ++ V++ LC + A+E + CM ++ ++P +
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
++ +I+ YG + A D M K G HP FTY +L+ K G++ A + +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
D V YN L+ A C + A+ L EMVQ+ PD +YT L+ C +G T
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Query: 545 -------KEAEER 550
KEAE R
Sbjct: 705 VIAILFAKEAEAR 717
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 195/473 (41%), Gaps = 38/473 (8%)
Query: 99 GQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLE 158
G H F ++LKG L + +RE +K L + + +C G L
Sbjct: 613 GHHPTFFTYGSLLKG-LCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 159 AAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTL 218
A+ L MVQ+ LPD +T+ +++GLC+ G A + LPN V Y
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
+ G +Y M + G P+ VT N ++ G +++ +L E+ N +
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM------------------------ 314
P+L T + + Y K ++ +F L+ + N +
Sbjct: 791 G-PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849
Query: 315 -----------EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
EVD +N+LI+ C N +N A+ M G+ D T + ++ L
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ + +E+ +L MSK GI P+ Y +I GLC DI A + M+ + + P
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+ + ++ +C A L MLK + P + ++ L+ K+GN+ A L+
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
M GL D+V+YN+LI C A +L EM G + +Y L+R
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1082
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G++ A L ++M G D T + +V+ L + +++ ++ EM + G P
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR-MVLHEMSKQGISPE 933
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
Y LI G C V + A + M I P V + +V AL + G EA +L
Sbjct: 934 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+L K +P + + T M KN I+A L M +++D+V+YNVLI GLC
Sbjct: 994 FMLKM-KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1052
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILI-GALWKEGKTREACYIL------GVMSKMGI 384
M LA+ EM G L +A TY LI G L +E A IL G ++ M +
Sbjct: 1053 GDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1112
Query: 385 VPDE 388
D
Sbjct: 1113 SQDS 1116
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 35/270 (12%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
L R ++ G LPD T + +V G+C+ ++E +++ + G + T+N LI
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK-ILKAFICRGVEVDRYTFNMLISKC 874
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE---------- 272
C ++ A L M GI ++ TC+ +V L N +E++ +L E
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 273 -----ILNDDKDIPDLVTSTVFMDHYFKNR---------EFIQAFS----------LWNE 308
++N + D+ T+ V + ++ ++A + L
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M + + + ++ L++ CKN + A M G+ D +YN+LI L +G
Sbjct: 995 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGL 398
A + M G + + +YK +IRGL
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGL 1084
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 218/439 (49%), Gaps = 10/439 (2%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
L+ + L+GY + ++ V C G+L+ +L +M +KG P+ + + I+ L
Sbjct: 269 LLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
C++ + +A + EM+ G LP+ V Y TLI G+C + A + M I P+
Sbjct: 327 CRICKLAEAEEAF-SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
+T ++ C+ G + EA K+ E+ + PD VT T ++ Y K AF +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
N M Q +VV Y LI+GLCK ++ A EM K G+ P+ FTYN ++ L K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
G EA ++G G+ D ++Y ++ C ++ +A+E+L ML + P + +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 427 NLIID---LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
N++++ L+G +D + + ML G+ PN T+N+L+ + N+ A ++ ++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M ++G+ PD TY L+ C R+ A L +EM KG + +Y+ L++ R
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 544 TKEAEERYAKILKSGLMND 562
EA E + ++ + GL D
Sbjct: 682 FLEAREVFDQMRREGLAAD 700
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 215/433 (49%), Gaps = 2/433 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K AI + R + G +V ++N +++ +C++G +++AH L+ L+ G P++++Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISY 284
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+T++ GYC +DK L M G++PN ++ LC L EA++ E++
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+PD V T +D + K + A + EM + DV+ Y +I+G C+ M
Sbjct: 345 QGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KG+ PD+ T+ LI K G ++A + M + G P+ ++Y +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
GLC + D+ A ELL M + P +N I++ + ++ A+ G++
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ TY L+ A+ KSG + +A + +EML KGL P +VT+N+L+ C + +L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
M+ KG P+ ++ LV++ CIR N K A Y + G+ D + L +CK
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 576 LEEPVKAFNLFQD 588
+A+ LFQ+
Sbjct: 644 ARNMKEAWFLFQE 656
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 212/449 (47%), Gaps = 4/449 (0%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
++ + + +C G+++ A L +M KG+ PDV +++ +VNG C+ G ++K W
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV--W 301
Query: 199 -LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L+ M G PN Y ++I C + + +A +S M GI P+ V L+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C+ G ++ A K E+ + D PD++T T + + + + ++A L++EM +E D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
V + LING CK M A+ M++ G P+ TY LI L KEG A +L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M K+G+ P+ +Y ++ GLC +I A +L+ + + + ++D Y +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
++ A ML G+ P + T+N L+ G + L ML KG+ P+ T+N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
L+ C + A + ++M +G PD +Y LV+ C N KEA + ++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 558 GLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
G +L + K ++ ++A +F
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 187/395 (47%), Gaps = 13/395 (3%)
Query: 186 LCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD-----KALYLYSSMAD 240
L GL+ +A + +ML +G + ++ + N Y T S D A+ ++ +
Sbjct: 185 LVDFGLLREARR-VFEKMLNYGLVLSVDSCNV----YLTRLSKDCYKTATAIIVFREFPE 239
Query: 241 TGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD-IPDLVTSTVFMDHYFKNREF 299
G+ N + NI++H +C+ G +KEA +L +L + K PD+++ + ++ Y + E
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
+ + L M++ ++ + Y +I LC+ + A EM+++G+LPD Y L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I K G R A M I PD ++Y +I G C D+V A +L M +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
P + + +I+ Y + + +A + M++ G PNV TY LI K G++ A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
L EM GL P++ TYN ++ C + + A++L E G D ++YT L+ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
G +A+E ++L GL V +L N +C
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 178/402 (44%), Gaps = 42/402 (10%)
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
V D +Y Y D G P ++ L + G L+EA+++ E++LN + +
Sbjct: 158 VQFFDLLVYTYK---DWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGL-VLSVD 211
Query: 285 TSTVFMDHYFKN-----------REFIQAFSLWNEMRQNS-------------------- 313
+ V++ K+ REF + WN N
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 314 MEV-----DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
ME+ DV++Y+ ++NG C+ ++ + M +KG+ P+++ Y +IG L + K
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
EA M + GI+PD + Y +I G C DI A + + M + + P + +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
II + + D+ A M G+ P+ T+ LI + K+G++ A+ + M+ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
P+VVTY LI C D A +L EM + G +P++ +Y +V C GN +EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
+ + +GL D V L + YCK E KA + ++ L
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C + + + LC EG L++A L M + G P++FT+N IVNGLCK G +E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
LV E G + VTY TL+ YC +DKA + M G+QP VT N+L++
Sbjct: 511 VK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 256 ALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
C +G L++ +K+L +L K I P+ T + Y A +++ +M +
Sbjct: 570 GFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
D Y L+ G CK + M A+ EM KG TY++LI K K EA
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 375 ILGVMSKMGIVPDE 388
+ M + G+ D+
Sbjct: 688 VFDQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 218/439 (49%), Gaps = 10/439 (2%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
L+ + L+GY + ++ V C G+L+ +L +M +KG P+ + + I+ L
Sbjct: 269 LLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
C++ + +A + EM+ G LP+ V Y TLI G+C + A + M I P+
Sbjct: 327 CRICKLAEAEEAF-SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
+T ++ C+ G + EA K+ E+ + PD VT T ++ Y K AF +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
N M Q +VV Y LI+GLCK ++ A EM K G+ P+ FTYN ++ L K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
G EA ++G G+ D ++Y ++ C ++ +A+E+L ML + P + +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 427 NLIID---LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
N++++ L+G +D + + ML G+ PN T+N+L+ + N+ A ++ ++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL---NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M ++G+ PD TY L+ C R+ A L +EM KG + +Y+ L++ R
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 544 TKEAEERYAKILKSGLMND 562
EA E + ++ + GL D
Sbjct: 682 FLEAREVFDQMRREGLAAD 700
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 215/433 (49%), Gaps = 2/433 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K AI + R + G +V ++N +++ +C++G +++AH L+ L+ G P++++Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISY 284
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+T++ GYC +DK L M G++PN ++ LC L EA++ E++
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+PD V T +D + K + A + EM + DV+ Y +I+G C+ M
Sbjct: 345 QGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KG+ PD+ T+ LI K G ++A + M + G P+ ++Y +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
GLC + D+ A ELL M + P +N I++ + ++ A+ G++
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ TY L+ A+ KSG + +A + +EML KGL P +VT+N+L+ C + +L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
M+ KG P+ ++ LV++ CIR N K A Y + G+ D + L +CK
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 576 LEEPVKAFNLFQD 588
+A+ LFQ+
Sbjct: 644 ARNMKEAWFLFQE 656
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 212/449 (47%), Gaps = 4/449 (0%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
++ + + +C G+++ A L +M KG+ PDV +++ +VNG C+ G ++K W
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV--W 301
Query: 199 -LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L+ M G PN Y ++I C + + +A +S M GI P+ V L+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C+ G ++ A K E+ + D PD++T T + + + + ++A L++EM +E D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
V + LING CK M A+ M++ G P+ TY LI L KEG A +L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M K+G+ P+ +Y ++ GLC +I A +L+ + + + ++D Y +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
++ A ML G+ P + T+N L+ G + L ML KG+ P+ T+N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
L+ C + A + ++M +G PD +Y LV+ C N KEA + ++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 558 GLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
G +L + K ++ ++A +F
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 187/395 (47%), Gaps = 13/395 (3%)
Query: 186 LCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD-----KALYLYSSMAD 240
L GL+ +A + +ML +G + ++ + N Y T S D A+ ++ +
Sbjct: 185 LVDFGLLREARR-VFEKMLNYGLVLSVDSCNV----YLTRLSKDCYKTATAIIVFREFPE 239
Query: 241 TGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD-IPDLVTSTVFMDHYFKNREF 299
G+ N + NI++H +C+ G +KEA +L +L + K PD+++ + ++ Y + E
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
+ + L M++ ++ + Y +I LC+ + A EM+++G+LPD Y L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I K G R A M I PD ++Y +I G C D+V A +L M +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
P + + +I+ Y + + +A + M++ G PNV TY LI K G++ A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
L EM GL P++ TYN ++ C + + A++L E G D ++YT L+ C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
G +A+E ++L GL V +L N +C
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 178/402 (44%), Gaps = 42/402 (10%)
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
V D +Y Y D G P ++ L + G L+EA+++ E++LN + +
Sbjct: 158 VQFFDLLVYTYK---DWGSDPR--VFDVFFQVLVDFGLLREARRVFEKMLNYGL-VLSVD 211
Query: 285 TSTVFMDHYFKN-----------REFIQAFSLWNEMRQNS-------------------- 313
+ V++ K+ REF + WN N
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 314 MEV-----DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
ME+ DV++Y+ ++NG C+ ++ + M +KG+ P+++ Y +IG L + K
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
EA M + GI+PD + Y +I G C DI A + + M + + P + +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
II + + D+ A M G+ P+ T+ LI + K+G++ A+ + M+ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
P+VVTY LI C D A +L EM + G +P++ +Y +V C GN +EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
+ + +GL D V L + YCK E KA + ++ L
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C + + + LC EG L++A L M + G P++FT+N IVNGLCK G +E+A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
LV E G + VTY TL+ YC +DKA + M G+QP VT N+L++
Sbjct: 511 VK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 256 ALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
C +G L++ +K+L +L K I P+ T + Y A +++ +M +
Sbjct: 570 GFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
D Y L+ G CK + M A+ EM KG TY++LI K K EA
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 375 ILGVMSKMGIVPDE 388
+ M + G+ D+
Sbjct: 688 VFDQMRREGLAADK 701
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 236/526 (44%), Gaps = 17/526 (3%)
Query: 49 IEHASFCGRICWEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALD 108
I HA W +S+ N L+ A+ R QL DM S F +
Sbjct: 175 ISHAKMS---VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 109 N--MLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIR-LQR 165
+ +G L+ +RE +V+ G C +S V C EG++E A+ +Q
Sbjct: 232 QGYIEEGDLDGALRIREQ--MVEFG-----CSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
+ Q GF PD +T N +VNGLCK G ++ A + ++ ML+ G P++ TYN++I G C +
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE-IMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
V +A+ + M PN VT N L+ LC+ ++EA + L +L +PD+ T
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDVCT 402
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ R A L+ EMR E D YN+LI+ LC ++ A +M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
G TYN LI K KTREA I M G+ + ++Y +I GLC R +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
A +L+ M+ P +N ++ + R D+ A M G P++ TY LI
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
K+G + A L + KG+ YN +I R A+ L REM+++
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 526 -PDLISYTELVRESCIRGNT-KEAEERYAKILKSGLMNDHVPVQIL 569
PD +SY + R C G +EA + ++L+ G + + + +L
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 194/405 (47%), Gaps = 1/405 (0%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G PDV T N ++ LC+ + A ++ +M +G +P+ T+ T+++GY +D
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
AL + M + G + V+ N++VH C+ G +++A ++E+ N D PD T +
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ K A + + M Q + DV YN +I+GLCK + A +M+ +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ TYN LI L KE + EA + V++ GI+PD ++ +I+GLC R+ A EL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M + P +N++ID + A+ M G +V TYN LI K
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+ A + +EM G+ + VTYN LI C R + A QL +M+ +G +PD +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
Y L+ C G+ K+A + + +G D V L + CK
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 37/410 (9%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL----------- 199
LC G ++ AI + +M+Q+G+ PDV+T+N +++GLCK+G +++A + L
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 200 ----------------VREMLEF-------GPLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
V E E G LP++ T+N+LI+G C + A+ L+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
M G +P+ T N+L+ +LC G L EA ML++ + ++T +D + K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDGFCKA 483
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
+ +A +++EM + + + V YN LI+GLCK++ + A +M+ +G PD +TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
N L+ + G ++A I+ M+ G PD ++Y +I GLC + A +LL +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGN-I 474
+ P +N +I R + + AI L R+++ + P+ +Y + G I
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
A E+L KG P+ + +L L + ++L ++QK
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKAR 713
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 176/393 (44%), Gaps = 40/393 (10%)
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
DW++ E FG P+ YN ++ NS+ ++ M+ GI+P+ T N+L+ A
Sbjct: 142 DWMIDE---FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
LC L+ A MLE++ + +PD T T M Y + + A + +M +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGL-VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYI 375
V+ NV+++G CK + A + EM + G PD +T+N L+ L K G + A I
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
+ VM + G PD +Y +I GLC ++ A E+L
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL------------------------ 353
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
+ ++TRD PN TYN LI K + A L + +KG+ PDV T
Sbjct: 354 -----DQMITRD------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKIL 555
+N LI C R+H A++L EM KG PD +Y L+ C +G EA ++
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 556 KSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
SG + L + +CK + +A +F +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 202/390 (51%), Gaps = 12/390 (3%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
YSY + LC + A+ + M++ G+ PDV T + ++NG C+ + A D
Sbjct: 105 YSYN---IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID- 160
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
LV +M E G P++V YNT+I G C + V+ A+ L+ M G++ + VT N LV LC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+G +A +++ +++ D +P+++T T +D + K +F +A L+ EM + ++ DV
Sbjct: 221 CSGRWSDAARLMRDMVMRDI-VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
YN LINGLC + ++ A M+ KG LPD TYN LI K + E +
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M++ G+V D I+Y +I+G A+E+ + M +P + I LYG C +
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF-----SRMDSRPNIRTYSILLYGLCMN 394
Query: 439 --VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
V A++ + M K + ++ TYN +I K GN+ A+ L + KGL PDVV+Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+I C R D + L R+M + G P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 195/421 (46%), Gaps = 40/421 (9%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G D++++N ++N LC+ A +V +M++FG P++VT ++LI G+C N V
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALS-VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A+ L S M + G +P+ V N ++ C+ G ++ND
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-----------LVND-------------- 192
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
A L++ M ++ + D V YN L+ GLC + + A +M+ + ++
Sbjct: 193 -----------AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ T+ +I KEGK EA + M++ + PD +Y +I GLC + AK++
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
L M+ +P + +N +I+ + + K V M + G+ + TYN +I + +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+G A + M ++ P++ TY++L+ C + AL L M + D+ +
Sbjct: 362 AGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
Y ++ C GN ++A + + + GL D V + + +C+ + K+ L++
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 591 E 591
E
Sbjct: 479 E 479
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+ +P +V + + K++ + SL++ M + D+ +YN++IN LC+ +A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+M+K G PD T + LI + + +A ++ M +MG PD + Y +I G
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID---LYGRCKDVSNAILTRDLMLKFGV 454
C + A EL M + + + +N ++ GR D A L RD++++ +
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA--ARLMRDMVMR-DI 240
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PNV T+ A+I VK G A L EEM + + PDV TYN LI C D A Q
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ MV KG PD+++Y L+ C E + + ++ + GL+ D + + Y
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 575 KLEEPVKAFNLFQ 587
+ P A +F
Sbjct: 361 QAGRPDAAQEIFS 373
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+ L+ +M Q+ +V ++ +++ + K++ +L M G+ D ++YNI+I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
L + + A ++G M K G PD ++ +I G C + A +L+ M
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 421 PKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
P +++N IID G CK V++A+ D M + GV + TYN+L+ SG A
Sbjct: 172 PDVVIYNTIID--GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
L +M+ + + P+V+T+ +I A++L EM ++ PD+ +Y L+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 539 CIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
C+ G EA++ ++ G + D V L N +CK + + LF++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 211/405 (52%), Gaps = 9/405 (2%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL-PNLVT 214
K A+ L MV KG PD+ T+ ++NGLCK G + A + L + +E G + ++V
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK--MEKGKIEADVVI 242
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y+T+I C VD AL L++ M + GI+P+ T + L+ LC G +A ++L ++L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ K P++VT +D + K + I+A L++EM Q S++ ++V YN LING C + +
Sbjct: 303 -ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A M+ K LPD TYN LI K K + + MS+ G+V + ++Y +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKF 452
I G D A+ + M+++ + P + +N ++D G CK+ + A++ + + K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD--GLCKNGKLEKAMVVFEYLQKS 479
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
+ P+++TYN + K+G + + L + KG+ PDV+ YN +I C + A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
L +M + G PD +Y L+R +R K A K ++S
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAH-LRDGDKAASAELIKEMRS 583
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 210/450 (46%), Gaps = 37/450 (8%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ LC +L A+ + M++ G+ P + T N ++NG C + +A LV +M+E G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV-ALVDQMVEMG 165
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ VT+ TL+ G N +A+ L M G QP+ VT +++ LC+ G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+L + + K D+V + +D K R A +L+ EM + DV Y+ LI+
Sbjct: 226 NLLNK-MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LC + A +ML++ + P+ T+N LI A KEGK EA + M + I P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTR 446
++Y +I G C + A+++ M++ +P + +N +I+ + + K V + + L R
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 447 DL----------------------------------MLKFGVHPNVFTYNALILAHVKSG 472
D+ M+ GVHPN+ TYN L+ K+G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
+ +A + E + + PD+ TYN++ C + L + KG +PD+I+Y
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMND 562
++ C +G +EA + K+ + G + D
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 210/431 (48%), Gaps = 2/431 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K + I M G +++T+N ++N LC+ + A ++ +M++ G P++VT
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL-AILGKMMKLGYGPSIVTL 138
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N+L+ G+C N + +A+ L M + G QP+ VT LVH L ++ EA ++E ++
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PDLVT ++ K E A +L N+M + +E DVV Y+ +I+ LCK + ++
Sbjct: 199 KGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KG+ PD FTY+ LI L G+ +A +L M + I P+ +++ +I
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ ++ A++L M+ + P + +N +I+ + + A LM+
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
P+V TYN LI K+ + L +M +GL + VTY LI D A +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
++MV G P++++Y L+ C G ++A + + KS + D I+ CK
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 576 LEEPVKAFNLF 586
+ ++LF
Sbjct: 498 AGKVEDGWDLF 508
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 8/441 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV---REMLEFGPLPNL 212
KL+ A+ L MV+ P + + +++ + K+ K D ++ +M G NL
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM----KKFDLVISFGEKMEILGVSHNL 100
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
TYN +I C + + AL + M G P+ VT N L++ C + EA ++++
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
++ PD VT T + F++ + +A +L M + D+V Y +INGLCK
Sbjct: 161 MVEMGYQ-PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+LA +M K + D Y+ +I +L K +A + M GI PD +Y
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I LC A LL ML + P + +N +ID + + + A D M++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
+ PN+ TYN+LI + A + M++K PDVVTYN LI C +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
++L R+M ++G + ++YT L+ + A+ + +++ G+ + + L +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 573 YCKLEEPVKAFNLFQDWLESK 593
CK + KA +F+ +SK
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSK 480
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 2/356 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ + LC ++ A+ L M KG PDVFT++ +++ LC G A L+ +M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS-RLLSDM 301
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
LE PN+VT+N+LI + + +A L+ M I PN VT N L++ C + L
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA+++ +++ D +PD+VT ++ + K ++ + L+ +M + + + V Y
Sbjct: 362 DEAQQIFTLMVSKDC-LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI+G + + A +M+ GV P+ TYN L+ L K GK +A + + K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
+ PD +Y +M G+C + +L + + P I +N +I + + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
M + G P+ TYN LI AH++ G+ + L +EM + D TY L+
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 139/279 (49%), Gaps = 2/279 (0%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
EGKL A +L M+Q+ P++ T+N ++NG C +++A M+ LP++V
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL-MVSKDCLPDVV 381
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TYNTLI G+C V + L+ M+ G+ N VT L+H + A+ + +++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++D P+++T +D KN + +A ++ ++++ ME D+ YN++ G+CK
Sbjct: 442 VSDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ + C + KGV PD YN +I K+G EA + M + G +PD +Y
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
+IR D D + EL+ M + + L+ D+
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 138/295 (46%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+A L+ EM ++ +V ++ L++ + K + +L + +M GV + +TYNI+I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
L + + A ILG M K+G P ++ ++ G C I A L+ M+
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + + ++ + S A+ + M+ G P++ TY A+I K G A +L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+M + DVV Y+ +I + C R D AL L EM KG RPD+ +Y+ L+ C
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
G +A + +L+ + + V L + + K + ++A LF + ++ D
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKA---HDWLVREMLEFGPLPNLVTYNTLIKGYC 223
MV G P++ T+N +++GLCK G +EKA ++L + +E P++ TYN + +G C
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME----PDIYTYNIMSEGMC 496
Query: 224 TVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
V+ L+ S++ G++P+ + N ++ C+ G LKE L + +D +PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG-LKEEAYTLFIKMKEDGPLPDS 555
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
T + + ++ + + L EMR D Y ++ + L +L
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 214/445 (48%), Gaps = 7/445 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C L++A ++ M KG + + H+++GLC +++A D V+ M + P
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK-MKDDECFPT 322
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ TY LIK C +AL L M +TGI+PN T +L+ +LC ++A+++L
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++L + +P+++T ++ Y K A + M + + YN LI G CK+
Sbjct: 383 QML-EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A G +ML++ VLPD TYN LI + G A +L +M+ G+VPD+ +Y
Sbjct: 442 NVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
MI LC + + A +L + + P +++ +ID Y + V A L + ML
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
PN T+NALI G + A L+E+M+ GL P V T +LI D
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A ++M+ G +PD +YT ++ C G +AE+ AK+ ++G+ D L
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 572 MYCKLEEPVKAFNLFQDWLESKRDS 596
Y L + AF D L+ RD+
Sbjct: 681 GYGDLGQTNFAF----DVLKRMRDT 701
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 213/426 (50%), Gaps = 3/426 (0%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ P+++T+N +VNG CK+G +E+A+ + V +++E G P+ TY +LI GYC
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY-VSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+D A +++ M G + N V L+H LC + EA + + + DD+ P + T
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK-MKDDECFPTVRTY 326
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV + + +A +L EM + ++ ++ Y VLI+ LC A +ML+
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG++P+ TYN LI K G +A ++ +M + P+ +Y +I+G C ++ +
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHK 445
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A +L ML ++P + +N +ID R + +A LM G+ P+ +TY ++I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ KS + A L + + KG+ P+VV Y LI C D A + +M+ K P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ +++ L+ C G KEA K++K GL IL + K + A++ F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 587 QDWLES 592
Q L S
Sbjct: 626 QQMLSS 631
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 230/481 (47%), Gaps = 9/481 (1%)
Query: 80 CQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEY 139
C+L + + ++ +S E G F +++ G +R + ++ L+G C
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG--CRR 286
Query: 140 SYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL 199
+ + + LC+ +++ A+ L M P V T+ ++ LC +A + L
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN-L 345
Query: 200 VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
V+EM E G PN+ TY LI C+ +KA L M + G+ PN +T N L++ C+
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 260 NGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVV 319
G +++A ++ E++ K P+ T + Y K+ +A + N+M + + DVV
Sbjct: 406 RGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVV 463
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
YN LI+G C++ + AY M +G++PD +TY +I +L K + EAC + +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD- 438
+ G+ P+ + Y +I G C + A +L ML+ +P + +N +I +G C D
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI--HGLCADG 581
Query: 439 -VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
+ A L + M+K G+ P V T LI +K G+ AYS ++ML+ G PD TY
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
I C A + +M + G PDL +Y+ L++ G T A + ++ +
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 558 G 558
G
Sbjct: 702 G 702
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 182/361 (50%), Gaps = 2/361 (0%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNTL+ VD+ +Y M + + PN T N +V+ C+ G+++EA + + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D PD T T + Y + ++ AF ++NEM + VAY LI+GLC + +
Sbjct: 246 EAGLD-PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A +M P TY +LI +L + EA ++ M + GI P+ +Y V+
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I LC +A+ELL ML ++P I +N +I+ Y + + +A+ +LM +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PN TYN LI + KS N+++A + +ML + + PDVVTYN LI C + D A +
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
L M +G PD +YT ++ C +EA + + + + G+ + V L + YC
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 575 K 575
K
Sbjct: 544 K 544
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 230/520 (44%), Gaps = 96/520 (18%)
Query: 144 HAATVRL--LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR 201
H TV + LC + K E A L M++KG +P+V T+N ++NG CK G++E A D V
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD--VV 416
Query: 202 EMLEFGPL-PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
E++E L PN TYN LIKGYC N V KA+ + + M + + P+ VT N L+ C +
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
G+ A ++L ++ND +PD T T +D K++ +A L++ + Q + +VV
Sbjct: 476 GNFDSAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
Y LI+G CK ++ A+ +ML K LP++ T+N LI L +GK +EA + M
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 381 KMGIV-----------------------------------PDEISYKVMIRGLCFDRDIV 405
K+G+ PD +Y I+ C + ++
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 406 RAKELLWCMLNNLMVPKPIVW-------------NLIIDLYGRCKDVSN--------AIL 444
A++++ M N + P + N D+ R +D +++
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 445 TRDLMLKFG--------------------------------VHPNVFTYNALILAHVKSG 472
L +K+G V PN +Y LIL + G
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 473 NIYRAYSLKEEML-TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
N+ A + + M +G+ P + +N L+ C L+ H+ A ++ +M+ GH P L S
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
L+ +G + + +L+ G D + +I+ +
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 235/517 (45%), Gaps = 61/517 (11%)
Query: 130 IGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKV 189
+ ++ C + + ++ LC + A+ L + M + G P++ T+ +++ LC
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 190 GLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYC-------------------------T 224
EKA + L+ +MLE G +PN++TYN LI GYC T
Sbjct: 372 CKFEKARE-LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 225 VN---------SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N +V KA+ + + M + + P+ VT N L+ C +G+ A ++L ++N
Sbjct: 431 YNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMN 489
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
D +PD T T +D K++ +A L++ + Q + +VV Y LI+G CK ++
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A+ +ML K LP++ T+N LI L +GK +EA + M K+G+ P + ++I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF--- 452
L D D A ML++ P + I Y R + +A D+M K
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA---EDMMAKMREN 666
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG----------- 501
GV P++FTY++LI + G A+ + + M G P T+ LI
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 502 -------AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
A N+ D ++L +MV+ P+ SY +L+ C GN + AE+ + +
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 555 LKS-GLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
++ G+ + L + CKL++ +A + D +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 174/382 (45%), Gaps = 24/382 (6%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
+++YT + + LC ++E A L + QKG P+V + +++G CK G +++AH
Sbjct: 497 QWTYT---SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH- 552
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
++ +ML LPN +T+N LI G C + +A L M G+QP T IL+H L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
++G A +++L+ PD T T F+ Y + + A + +MR+N + D
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTK-PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL--WKEGKTREACYI 375
+ Y+ LI G N A+ M G P T+ LI L K GK + +
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 376 LGVMSKM----------------GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
L MS M + P+ SY+ +I G+C ++ A+++ M N
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 420 V-PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ P +V+N ++ + K + A D M+ G P + + LI K G R
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 479 SLKEEMLTKGLFPDVVTYNLLI 500
S+ + +L G + D + + ++I
Sbjct: 852 SVFQNLLQCGYYEDELAWKIII 873
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 28/316 (8%)
Query: 103 VFNALDNML--KGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAA 160
FNAL + L G L+ ++ E +VKIGL+ + + + L +G + A
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEK--MVKIGLQP-----TVSTDTILIHRLLKDGDFDHA 621
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+ M+ G PD T+ + C+ G + A D + + M E G P+L TY++LIK
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK-MRENGVSPDLFTYSSLIK 680
Query: 221 GYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA---------KKMLE 271
GY + + A + M DTG +P++ T L+ L E + K+ M+E
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 272 --------EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVVAYN 322
E + + P+ + + + A +++ M++N + + +N
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
L++ CK + N A +M+ G LP + +LI L+K+G+ + + +
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 383 GIVPDEISYKVMIRGL 398
G DE+++K++I G+
Sbjct: 861 GYYEDELAWKIIIDGV 876
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 38/218 (17%)
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
K++ ML + + P +N +++ Y + +V A +++ G+ P+ FTY +LI+
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 468 HVKSGNIYRAYSLKEEMLTKG-----------------------------------LFPD 492
+ + ++ A+ + EM KG FP
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYA 552
V TY +LI + C AL L +EM + G +P++ +YT L+ C + ++A E
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 553 KILKSGLMNDHVPVQILFNMYCK---LEEPVKAFNLFQ 587
++L+ GLM + + L N YCK +E+ V L +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 54/270 (20%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR-- 201
+ ++ C EG+L A + M + G PD+FT++ ++ G +G A D L R
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 202 --------------------------------------------------EMLEFGPLPN 211
+M+E PN
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMA-DTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+Y LI G C V ++ A ++ M + GI P+ + N L+ C+ EA K++
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++++ +P L + V + +K E + S++ + Q D +A+ ++I+G+ K
Sbjct: 820 DDMICVGH-LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
L+ Y M K G + TY++LI
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 208/420 (49%), Gaps = 5/420 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
++ A++L M G +PD T N ++ GLCK + +A +V ML G P+ +TY
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK-MVNRMLIRGFAPDDITY 325
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
L+ G C + VD A L+ + +P V N L+H +G L +AK +L +++
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+PD+ T + Y+K A + ++MR + +V +Y +L++G CK ++
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
AY EM G+ P+ +N LI A KE + EA I M + G PD ++ +I
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
GLC +I A LL M++ +V + +N +I+ + R ++ A + M+ G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ TYN+LI ++G + +A SL E+ML G P ++ N+LI C + A++
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
++EMV +G PD++++ L+ C G ++ + K+ G+ D V L + CK
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 210/416 (50%), Gaps = 11/416 (2%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC ++ A ++ M+ +GF PD T+ +++NGLCK+G ++ A D R P P
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKP 351
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKM 269
+V +NTLI G+ T +D A + S M + GI P+ T N L++ + G + A ++
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L ++ N P++ + T+ +D + K + +A+++ NEM + ++ + V +N LI+ C
Sbjct: 412 LHDMRNKGCK-PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
K + A EM +KG PD +T+N LI L + + + A ++L M G+V + +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
+Y +I +I A++L+ M+ I +N +I R +V A + M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
L+ G P+ + N LI +SG + A ++EM+ +G PD+VT+N LI C
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
+ L + R++ +G PD +++ L+ C G +A +L G+ + VP
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA----CLLLDEGIEDGFVP 702
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 196/457 (42%), Gaps = 42/457 (9%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK 194
Y+CE ++ + + +L + A + M+ + P +FT ++ C V ++
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 195 AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
A L+R+M + G +PN V Y TLI N V++AL L M G P+ T N ++
Sbjct: 236 ALS-LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
LC+ + EA KM+ NR I+ F+
Sbjct: 295 LGLCKFDRINEAAKMV-------------------------NRMLIRGFA---------- 319
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
D + Y L+NGLCK ++ A + K P+ +N LI G+ +A
Sbjct: 320 -PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 375 ILGVM-SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
+L M + GIVPD +Y +I G + + A E+L M N P + +++D +
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
+ + A + M G+ PN +N LI A K I A + EM KG PDV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
T+N LI C + AL L R+M+ +G + ++Y L+ RG KEA + +
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
++ G D + L C+ E KA +LF+ L
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
+R C+ + + V C GK++ A + M G P+ N +++ CK
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+ +A + + REM G P++ T+N+LI G C V+ + AL+L M G+ N VT N
Sbjct: 475 IPEAVE-IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L++A G +KEA+K++ E++ + D +T + + E +A SL+ +M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ ++ N+LINGLC++ ++ A + EM+ +G PD T+N LI L + G+ +
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+ + GI PD +++ ++ LC + A LL + + VP W++++
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ C E ++ A+ + R M +KG PDV+T N +++GLC+V ++ A WL+R+M+ G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL-WLLRDMISEG 524
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+ N VTYNTLI + + +A L + M G + +T N L+ LC G + +A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+ E++L D P ++ + ++ ++ +A EM D+V +N LING
Sbjct: 585 SLFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LC+ + ++ +G+ PD T+N L+ L K G +AC +L + G VP+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 388 EISYKVMIRGL 398
++ ++++ +
Sbjct: 704 HRTWSILLQSI 714
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF---MDHYFKNREFIQAFSLWNE 308
+L+ L NG K ++L ++ KD + ++F M Y K Q L E
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQM----KDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 309 MRQ-NSMEVDVVAYNV----LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
MR S E +YNV L++G C N+ Y +ML + + P FT+ +++ A
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY----DMLSRKIPPTLFTFGVVMKAF 227
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIR--------------------------- 396
+ A +L M+K G VP+ + Y+ +I
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 397 --------GLC-FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
GLC FDR I A +++ ML P I + +++ G CK + +D
Sbjct: 288 ETFNDVILGLCKFDR-INEAAKMVNRMLIRGFAPDDITYGYLMN--GLCK-IGRVDAAKD 343
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLIGAACNL 506
L + P + +N LI V G + A ++ +M+T G+ PDV TYN LI
Sbjct: 344 LFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
AL++ +M KG +P++ SYT LV C G EA ++ GL + V
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 567 QILFNMYCKLEEPVKAFNLFQD 588
L + +CK +A +F++
Sbjct: 463 NCLISAFCKEHRIPEAVEIFRE 484
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 9/237 (3%)
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL-LWC 413
Y +LIG L G+ + +L M GIV E + ++R +D+ + L
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD--YDKAGFPGQTTRLML 170
Query: 414 MLNNLMVPKPIV--WNLIIDLY--GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+ N+ +P +N+++++ G C V+ + ML + P +FT+ ++ A
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD--MLSRKIPPTLFTFGVVMKAFC 228
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
I A SL +M G P+ V Y LI + + ALQL EM G PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
++ +++ C EA + ++L G D + L N CK+ A +LF
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 243/463 (52%), Gaps = 21/463 (4%)
Query: 94 SGHEKGQHAVFNAL---DNMLKGSL--ERLKMMRENISLVKIGLRGY--ACEYSYTEHAA 146
+G + H++F+A+ DN+ S+ + L + N S ++G + + Y Y A
Sbjct: 130 NGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAL 189
Query: 147 TVRLLCL----EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
+ + L + E + + + M+++ P+VFT N ++N LCK G M KA D ++ +
Sbjct: 190 SCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD-VMED 248
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNS---VDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
M +G PN+V+YNTLI GYC + + KA + M + + PN T NIL+ +
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 260 NGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+ +L + K+ +E+L D+D+ P++++ ++ + +A S+ ++M ++ ++
Sbjct: 309 DDNLPGSMKVFKEML--DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+ YN LING CKN ++ A + +G +P YN+LI A K GK + +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M + GIVPD +Y +I GLC + +I AK+ L+ L + +P + ++++++ Y R +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGE 485
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM-LTKGLFPDVVTYN 497
A + M K G+ P TYN ++ + K GN+ A +++ +M + L +V +YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+L+ + A L EM++KG P+ I+Y E+V+E +
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-EIVKEEMV 587
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 169/318 (53%), Gaps = 5/318 (1%)
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
Y+Y M IQPN T N++++ALC+ G + +A+ ++E+ + P++V+ +D
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED-MKVYGCSPNVVSYNTLIDG 267
Query: 293 YFK---NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
Y K N + +A ++ EM +N + ++ +N+LI+G K+ + + EML + V
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
P+ +YN LI L GK EA + M G+ P+ I+Y +I G C + + A +
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+ + VP ++N++ID Y + + + ++ M + G+ P+V TYN LI
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
++GNI A L +++ +KGL PD+VT+++L+ C A L +EM + G +P +
Sbjct: 448 RNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 530 SYTELVRESCIRGNTKEA 547
+Y +++ C GN K A
Sbjct: 507 TYNIVMKGYCKEGNLKAA 524
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA-- 362
++ EM + ++ +V +NV+IN LCK MN A +M G P+ +YN LI
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 363 -LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
L GK +A +L M + + P+ ++ ++I G D ++ + ++ ML+ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
I +N +I+ +S AI RD M+ GV PN+ TYNALI K+ + A +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+ +G P YN+LI A C L D L+ EM ++G PD+ +Y L+ C
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
GN + A++ + ++ GL D V IL YC+ E KA L ++
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G+ A L + M + G P T+N ++ G CK G ++ A + + E N
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
+ +YN L++GY ++ A L + M + G+ PNR+T I+ + + G + +
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 213/458 (46%), Gaps = 15/458 (3%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C + + ++ + A+R+ + M ++G PD+F +N ++ GL K M++A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+LV EM+E G PN TY I GY + A M + G+ PN+V C L++
Sbjct: 507 RSFLV-EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
C+ G + EA ++ D + D T TV M+ FKN + A ++ EMR +
Sbjct: 566 EYCKKGKVIEACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
DV +Y VLING K M A EM+++G+ P+ YN+L+G + G+ +A +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
L MS G+ P+ ++Y +I G C D+ A L M +VP V+ ++D R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK---GLF-- 490
DV AI K G + +NALI K G LK E+L + G F
Sbjct: 745 LNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKT----ELKTEVLNRLMDGSFDR 799
Query: 491 ---PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
P+ VTYN++I C + + A +L +M P +I+YT L+ G E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 548 EERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
+ + + +G+ DH+ ++ N + K KA L
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 220/487 (45%), Gaps = 40/487 (8%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+A+ + C E + L M ++ + +T+ +V G+C G ++ A++ +V+EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN-IVKEM 443
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ G PN+V Y TLIK + + A+ + M + GI P+ N L+ L + +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA+ L E++ + P+ T F+ Y + EF A EMR+ + + V
Sbjct: 504 DEARSFLVEMVENGLK-PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LIN CK + A M+ +G+L DA TY +L+ L+K K +A I M G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
I PD SY V+I G ++ +A + M+ + P I++N+++ + R ++ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
D M G+HPN TY +I + KSG++ A+ L +EM KGL PD Y L+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 504 CNLRSHDFAL------------------------------QLRREMV--------QKGHR 525
C L + A+ +L+ E++ + +
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
P+ ++Y ++ C GN + A+E + ++ + LM + L N Y K+ + F +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 586 FQDWLES 592
F + + +
Sbjct: 863 FDEAIAA 869
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 200/406 (49%), Gaps = 18/406 (4%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +GK+ A R MV +G L D T+ ++NGL K ++ A + + REM G P+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE-IFREMRGKGIAPD 626
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ +Y LI G+ + ++ KA ++ M + G+ PN + N+L+ C +G +++AK++L+
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 272 EILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E+ K + P+ VT +D Y K+ + +AF L++EM+ + D Y L++G C+
Sbjct: 687 EM--SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 331 -NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL-----GVMSKMGI 384
N + + KKG +N LI ++K GKT +L G + G
Sbjct: 745 LNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG- 801
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
P++++Y +MI LC + ++ AKEL M N ++P I + +++ Y + +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD-----VVTYNLL 499
D + G+ P+ Y+ +I A +K G +A L ++M K D + T L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
+ + + A ++ MV+ + PD + EL+ ESCI N +
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 200/434 (46%), Gaps = 6/434 (1%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++ A++L+ M+ KG +P +T++ +++GLCK+ +E A LV EM G + TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLV-EMDSLGVSLDNHTYS 316
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGI--QPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
LI G + D A L M GI +P C I V + + G +++AK + + ++
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV--MSKEGVMEKAKALFDGMI 374
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
IP ++ Y + + Q + L EM++ ++ + Y ++ G+C + +
Sbjct: 375 ASGL-IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ AY EM+ G P+ Y LI + + +A +L M + GI PD Y +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I GL + + A+ L M+ N + P + I Y + ++A M + GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PN LI + K G + A S M+ +G+ D TY +L+ D A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ REM KG PD+ SY L+ GN ++A + ++++ GL + + +L +C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 575 KLEEPVKAFNLFQD 588
+ E KA L +
Sbjct: 674 RSGEIEKAKELLDE 687
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 190/445 (42%), Gaps = 62/445 (13%)
Query: 157 LEAAIRLQRI---------MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
L+A +R R+ MV++ + DV T++ ++ C+ G ++ D L + EF
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
T+N VD AL L SM G+ P + T ++L+ LC+ L++AK
Sbjct: 253 T--------------ATLN-VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
SL EM + +D Y++LI+G
Sbjct: 298 ------------------------------------SLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
L K + + A G EM+ G+ + Y+ I + KEG +A + M G++P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+Y +I G C ++++ + ELL M +V P + ++ D+ A
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M+ G PNV Y LI +++ A + +EM +G+ PD+ YN LI +
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS-GLMNDHVPV 566
D A EMV+ G +P+ +Y + I + + ++Y K ++ G++ + V
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFI-SGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 567 QILFNMYCKLEEPVKAFNLFQDWLE 591
L N YCK + ++A + ++ ++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVD 585
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 214/437 (48%), Gaps = 4/437 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
KL A +++ G+ PD T + ++NGLC G + +A + LV M+E G P L+T
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE-LVDRMVEMGHKPTLITL 180
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N L+ G C V A+ L M +TG QPN VT ++ +C++G A ++L + +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK-ME 239
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+ K D V ++ +D K+ AF+L+NEM + D++ Y LI G C +
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
+M+K+ + PD ++ LI KEGK REA + M + GI PD ++Y +I
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGV 454
G C + + +A +L M++ P +N++I+ Y + + + + L R + L+ GV
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GV 418
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
+ TYN LI + G + A L +EM+++ + PD+V+Y +L+ C+ + AL+
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ ++ + D+ Y ++ C +A + + + G+ D I+ C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 575 KLEEPVKAFNLFQDWLE 591
K +A LF+ E
Sbjct: 539 KKGSLSEADLLFRKMEE 555
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 205/427 (48%), Gaps = 2/427 (0%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A V LCL GK+ A+ L MV+ GF P+ T+ ++ +CK G A + L+R+M E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME-LLRKMEE 240
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
+ V Y+ +I G C S+D A L++ M G + + + L+ C G +
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
K+L +++ K PD+V + +D + K + +A L EM Q + D V Y LI
Sbjct: 301 GAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
+G CK ++ A M+ KG P+ T+NILI K + + MS G+V
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
D ++Y +I+G C + AKEL M++ + P + + +++D + A+
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
+ + K + ++ YN +I + + A+ L + KG+ PDV TYN++IG C
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
S A L R+M + GH P+ +Y L+R G+ ++ + +I + G D
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 566 VQILFNM 572
V+++ +M
Sbjct: 600 VKMVVDM 606
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 151/267 (56%), Gaps = 2/267 (0%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + EGKL A L + M+Q+G PD T+ +++G CK ++KA+ L M+
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMV 379
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
G PN+ T+N LI GYC N +D L L+ M+ G+ + VT N L+ CE G L+
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
AK++ +E+++ + PD+V+ + +D N E +A ++ ++ ++ ME+D+ YN++
Sbjct: 440 VAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I+G+C ++ A+ C + KGV PD TYNI+IG L K+G EA + M + G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELL 411
P+ +Y ++IR + D ++ +L+
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 194/427 (45%), Gaps = 37/427 (8%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M KG +++T + ++N C+ + A + + +++ G P+ VT++TLI G C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK-IIKLGYEPDTVTFSTLINGLCLEG 156
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
V +AL L M + G +P +T N LV+ LC NG + +A
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA-------------------- 196
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
L + M + + + V Y ++ +CK+ LA +M +
Sbjct: 197 ----------------VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+ + DA Y+I+I L K+G A + M G D I Y +IRG C+
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+LL M+ + P + ++ +ID + + + A M++ G+ P+ TY +LI
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
K + +A + + M++KG P++ T+N+LI C D L+L R+M +G
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
D ++Y L++ C G + A+E + +++ + D V +IL + C EP KA +F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 587 QDWLESK 593
+ +SK
Sbjct: 481 EKIEKSK 487
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 178/362 (49%), Gaps = 8/362 (2%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ ++++C G+ A+ L R M ++ D ++ I++GLCK G ++ A + L EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN-LFNEM 273
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
G +++ Y TLI+G+C D L M I P+ V + L+ + G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+EA+++ +E++ PD VT T +D + K + +A + + M ++ +N+
Sbjct: 334 REAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LING CK L++ +M +GV+ D TYN LI + GK A + M
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
+ PD +SYK+++ GLC + + +A E+ + + M ++N+II +G C + S
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII--HGMC-NASKVD 509
Query: 444 LTRDLMLKF---GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
DL GV P+V TYN +I K G++ A L +M G P+ TYN+LI
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 501 GA 502
A
Sbjct: 570 RA 571
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 149/313 (47%), Gaps = 1/313 (0%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P L+ + + +++ L +M + ++ +++IN C+ + ++LA+
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+++K G PD T++ LI L EG+ EA ++ M +MG P I+ ++ GLC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+ + A L+ M+ P + + ++ + + + A+ M + + +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
Y+ +I K G++ A++L EM KG D++ Y LI C D +L R+M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
++ PD+++++ L+ G +EAEE + ++++ G+ D V L + +CK +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 581 KAFNLFQDWLESK 593
KA N D + SK
Sbjct: 370 KA-NHMLDLMVSK 381
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A L+ EM ++ ++ ++ L + + + + +L +M KG+ + +T +I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ K A +G + K+G PD +++ +I GLC + + A EL+ M+
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P I N +++ VS+A+L D M++ G PN TY ++ KSG A L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+M + + D V Y+++I C S D A L EM KG + D+I YT L+R C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
G + + ++K + D V L + + K + +A L ++ ++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C K++ A L + KG PDV T+N ++ GLCK G + +A D L R+M E G P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFRKMEEDGHSP 560
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
N TYN LI+ + K+ L + G + T ++V L +G LK++
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKS 615
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 222/429 (51%), Gaps = 2/429 (0%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
+ + L + M KG +++T + ++N C+ + A + + +++ G PN +T++T
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK-IIKLGYEPNTITFST 163
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
LI G C V +AL L M + G +P+ +T N LV+ LC +G EA ++++++
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P+ VT ++ K+ + A L +M + ++++D V Y+++I+GLCK+ ++ A
Sbjct: 224 CQ-PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+ EM KG+ + TYNILIG G+ + +L M K I P+ +++ V+I
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+ + A+EL M++ + P I + +ID + + + A DLM+ G PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ T+N LI + K+ I L +M +G+ D VTYN LI C L + A +L +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
EMV + P++++Y L+ C G +++A E + KI KS + D I+ + C
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 578 EPVKAFNLF 586
+ A++LF
Sbjct: 523 KVDDAWDLF 531
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 224/459 (48%), Gaps = 41/459 (8%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
+++ G+ P+ T + ++NGLC G + +A + LV M+E G P+L+T NTL+ G C
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALE-LVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP-DLVT 285
+A+ L M + G QPN VT +++ +C++G A ++L ++ ++++I D V
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLDAVK 265
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
++ +D K+ AF+L+NEM + +++ YN+LI G C + +M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
K+ + P+ T+++LI + KEGK REA + M GI PD I+Y +I G C + +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNAL 464
+A +++ M++ P +N++I+ Y + + + + L R + L+ GV + TYN L
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTL 444
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY---------------------------- 496
I + G + A L +EM+++ + P++VTY
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 497 -------NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
N++I CN D A L + KG +P + +Y ++ C +G EAE
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 550 RYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+ K+ + G D IL + + K+ L ++
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 212/457 (46%), Gaps = 37/457 (8%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LCLEG++ A+ L MV+ G PD+ T N +VNGLC G +A L+ +M+E+G P
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM-LLIDKMVEYGCQP 226
Query: 211 NLVTY-----------------------------------NTLIKGYCTVNSVDKALYLY 235
N VTY + +I G C S+D A L+
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 236 SSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK 295
+ M GI N +T NIL+ C G + K+L +++ K P++VT +V +D + K
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 345
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ +A L EM + D + Y LI+G CK ++ A M+ KG P+ T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
+NILI K + + + MS G+V D ++Y +I+G C + AKEL M+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
+ + P + + +++D + A+ + + K + ++ YN +I + +
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
A+ L + KG+ P V TYN++IG C A L R+M + GH PD +Y L+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
R G+ ++ + ++ + G D ++++ +M
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 622
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK 194
Y C+ + + + ++C G+ A+ L R M ++ D ++ I++GLCK G ++
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 195 AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
A + L EM G N++TYN LI G+C D L M I PN VT ++L+
Sbjct: 282 AFN-LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
+ + G L+EA+++ +E+++ PD +T T +D + K +A + + M
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
+ ++ +N+LING CK ++ +M +GV+ D TYN LI + GK A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+ M + P+ ++YK+++ GLC + + +A E+ + + M ++N+II +G
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII--HG 517
Query: 435 RCKDVSNAILTRDLMLKF---GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
C + S DL GV P V TYN +I K G + A L +M G P
Sbjct: 518 MC-NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
D TYN+LI A +++L E+ + G D
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 193/412 (46%), Gaps = 10/412 (2%)
Query: 188 KVGLME-KAHDW--LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ 244
+ GL++ KA D L R+M+ PLP ++ ++ L D L L M GI
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
N T +I+++ C L A + +I+ + P+ +T + ++ +A
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE-PNTITFSTLINGLCLEGRVSEALE 179
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
L + M + + D++ N L+NGLC + A +M++ G P+A TY ++ +
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
K G+T A +L M + I D + Y ++I GLC + A L M + I
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 425 VWNLIIDLY---GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+N++I + GR D A L RD M+K ++PNV T++ LI + VK G + A L
Sbjct: 300 TYNILIGGFCNAGRWDD--GAKLLRD-MIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+EM+ +G+ PD +TY LI C D A Q+ MV KG P++ ++ L+ C
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
+ E + K+ G++ D V L +C+L + A LFQ+ + K
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 2/204 (0%)
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRD 447
+SY+ +R D A +L M+++ +P I ++ + + K + L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ LK G+ N++T + +I + + A+S +++ G P+ +T++ LI C
Sbjct: 114 MELK-GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
AL+L MV+ GH+PDLI+ LV C+ G EA K+++ G + V
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 568 ILFNMYCKLEEPVKAFNLFQDWLE 591
+ N+ CK + A L + E
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEE 256
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C K++ A L + KG P V T+N ++ GLCK G + +A + L R+M E G P
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA-ELLFRKMEEDGHAP 576
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
+ TYN LI+ + K++ L + G + T +++ L +G LK++
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 217/450 (48%), Gaps = 3/450 (0%)
Query: 121 MRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHN 180
+R+ + + + + C + ++ + LC G+LE A L+ M +KG P T+
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 181 HIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMAD 240
++ LC GL++KA + L EM+ G PN+ TY LI G C +++A + M
Sbjct: 306 VLIKALCDRGLIDKAFN-LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 241 TGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFI 300
I P+ +T N L++ C++G + A ++L ++ P++ T M+ + +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+A L M N + D+V+YNVLI+GLC+ MN AY M + PD T+ +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
A K+GK A LG+M + GI DE++ +I G+C A +L ++ ++
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P N+I+D+ + V + + K G+ P+V TY L+ ++SG+I ++ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
E M G P+V Y ++I C + A +L M G P+ ++YT +V+
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 541 RGNTKEAEERYAKILKSGL-MNDHVPVQIL 569
G A E +++ G +ND + +L
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 228/513 (44%), Gaps = 62/513 (12%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ S + ++ LC G ++ A L M+ +G P+V T+ +++GLC+ G +E+A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ + R+M++ P+++TYN LI GYC V A L + M +PN T N L+
Sbjct: 356 -NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
LC G +A +L+ +L D+ PD+V+ V +D + A+ L + M +E
Sbjct: 415 GLCRVGKPYKAVHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
D + + +IN CK ++A + ML+KG+ D T LI + K GKTR+A +I
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 376 L-----------------------------------GVMSKMGIVPDEISYKVMIRGLCF 400
L G ++K+G+VP ++Y ++ GL
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIID---LYGRCKDVSNAILTRDLMLKFGVHPN 457
DI + +L M + +P + +II+ +GR ++ + M GV PN
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL---SAMQDSGVSPN 650
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGL-FPDVVTYNLLIGAACNLRSHDFALQLR 516
TY ++ +V +G + RA M+ +G D + +LL G + + D + +
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710
Query: 517 -REMVQKGHRP----DLISYTE------------LVRESCIRGNTKEAEERYAKILKSGL 559
++ + P +LIS E LV C G T E+ + +L+ G+
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770
Query: 560 MNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ + I+ YC ++ K L L+S
Sbjct: 771 FLEKA-MDIIMESYCSKKKHTKCMELITLVLKS 802
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 215/464 (46%), Gaps = 43/464 (9%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
R M GF+ + + IVN LCK G E A + + ++L+ G + + +L+ G+C
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAA-EMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 225 VNSVDKALYLYSSMA-DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
++ AL ++ M+ + PN V+ +IL+H LCE G L+EA L++ + + P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG-LKDQMGEKGCQPST 301
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
T TV + +AF+L++EM + +V Y VLI+GLC++ + A G +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
M+K + P TYN LI K+G+ A +L VM K P+ ++ ++ GLC
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+A LL ML+N + P + +N++ID R ++ A M F + P+ T+ A
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL-RSHD------------ 510
+I A K G A + ML KG+ D VT LI C + ++ D
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 511 -----FALQLRREMVQKGHR-----------------PDLISYTELVRESCIRGNTKEAE 548
+L + +M+ KG + P +++YT LV + IR
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV-DGLIRSGDITGS 600
Query: 549 ERYAKILK-SGLMNDHVPVQILFNMYC---KLEEPVKAFNLFQD 588
R +++K SG + + P I+ N C ++EE K + QD
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 184/391 (47%), Gaps = 6/391 (1%)
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
FG N Y++L+ ++ A Y M G + +V+ALC+NG+ +
Sbjct: 154 FGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVL 324
A+ + +IL + + +++ + + + A +++ M ++ + + V+Y++L
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLG-FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I+GLC+ + A+G +M +KG P TY +LI AL G +A + M G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNA 442
P+ +Y V+I GLC D I A + M+ + + P I +N +I+ G CKD V A
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN--GYCKDGRVVPA 390
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+M K PNV T+N L+ + G Y+A L + ML GL PD+V+YN+LI
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
C + A +L M PD +++T ++ C +G A +L+ G+ D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 563 HVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
V L + CK+ + A + + ++ +
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 6/300 (2%)
Query: 297 REFIQAFSLWNEMRQN-SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+E ++ ++E+R+ ++ Y+ L+ L K L LAY M G +
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
Y ++ AL K G T A + + K+G V D ++ G C ++ A ++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 416 NNLM-VPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
+ P + ++++I +G C+ + A +D M + G P+ TY LI A G
Sbjct: 258 KEVTCAPNSVSYSILI--HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
I +A++L +EM+ +G P+V TY +LI C + A + R+MV+ P +I+Y
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
L+ C G A E + K + L C++ +P KA +L + L++
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 194/397 (48%), Gaps = 37/397 (9%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ G+ PD T +VNG C+ + A LV +M+E G P++V YN +I C
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS-LVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
V+ A + + GI+PN VT LV+ LC + +A ++L +++ K P+++T
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITY 263
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ +D + KN + ++A L+ EM + S++ D+V Y+ LINGLC + ++ A M+
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG L D +YN LI K + + + MS+ G+V + ++Y +I+G D+ +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A+E M D FG+ P+++TYN L+
Sbjct: 384 AQEFFSQM----------------DF-------------------FGISPDIWTYNILLG 408
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+G + +A + E+M + + D+VTY +I C + A L + KG +P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
D+++YT ++ C +G E E Y K+ + GLM +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 8/422 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV---REMLEFGPLPNL 212
KL AI L MV+ P + N +++ + K+ K +D ++ ++M G +L
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL----KKYDVVISLGKKMEVLGIRNDL 120
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
T+N +I +C V AL + M G +P+RVT LV+ C + +A ++++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
++ PD+V +D K + AF + E+ + + +VV Y L+NGLC +
Sbjct: 181 MVEIGYK-PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ A +M+KK + P+ TY+ L+ A K GK EA + M +M I PD ++Y
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I GLC I A ++ M++ + + +N +I+ + + K V + + M +
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G+ N TYN LI ++G++ +A +M G+ PD+ TYN+L+G C+ + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L + +M ++ D+++YT ++R C G +EA + + GL D V + +
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 573 YC 574
C
Sbjct: 480 LC 481
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 37/355 (10%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C ++ A+ L MV+ G+ PD+ +N I++ LCK + A D+ +E+ G P
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF-KEIERKGIRP 223
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+VTY L+ G C + A L S M I PN +T + L+ A +NG + EAK++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
EE++ D PD+VT + ++ + +A +++ M DVV+YN LING CK
Sbjct: 284 EEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ + EM ++G++ + TYN LI ++ G +A M GI PD +
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +++ GLC +N + K +V + D+ R D+
Sbjct: 403 YNILLGGLC----------------DNGELEKALV--IFEDMQKREMDL----------- 433
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
++ TY +I K+G + A+SL + KGL PD+VTY ++ C
Sbjct: 434 ------DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 36/397 (9%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L +M++ P P++V +N L+ + D + L M GI+ + T NI+++ C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+ A +L ++L + PD VT ++ + + A SL ++M + + D+
Sbjct: 132 CCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
VAYN +I+ LCK + +N A+ + E+ +KG+ P+ TY L+ L + +A +L
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M K I P+ I+Y ++ + ++ AKEL
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELF--------------------------- 283
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+ M++ + P++ TY++LI I A + + M++KG DVV+YN
Sbjct: 284 --------EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
LI C + + ++L REM Q+G + ++Y L++ G+ +A+E ++++ G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 559 LMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+ D IL C E KA +F+D + + D
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 45/278 (16%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+++ + LCL +++ A ++ +MV KG L DV ++N ++NG CK +E L REM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK-LFREM 356
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ G + N VTYNTLI+G+ VDKA +S M GI P+ T NIL+ LC+NG
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG-- 414
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
E +A ++ +M++ M++D+V Y
Sbjct: 415 ----------------------------------ELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
+I G+CK + A+ C + KG+ PD TY ++ L +G E + M + G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
++ ++ + D DI + EL+ ML+ P
Sbjct: 501 LMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 178/405 (43%), Gaps = 54/405 (13%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
+V+IG + Y+ A + LC ++ A + + +KG P+V T+ +VNGL
Sbjct: 181 MVEIGYKPDIVAYN-----AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
C A L+ +M++ PN++TY+ L+ + V +A L+ M I P+
Sbjct: 236 CNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
VT + L++ LC + + EA +M + +++ + D+V+ ++ + K + L+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGC-LADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
EM Q + + V YN LI G + ++ A + +M G+ PD +TYNIL+G L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
G+ +A I M K + D ++Y +IRG+C + A W
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA------------------W 455
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
+L L + G+ P++ TY ++ G ++ +L +M
Sbjct: 456 SLFCSLSLK-----------------GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFAL--QLRREMVQKGHRPDLI 529
+GL + C L D L +L ++M+ G+ P L+
Sbjct: 499 EGLMKN----------DCTLSDGDITLSAELIKKMLSCGYAPSLL 533
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 3/415 (0%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
T N ++ LCK G + K + L+ ++++ G LPNL TYN I+G C +D A+ +
Sbjct: 218 TFNKLLRVLCKKGDV-KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNR 297
+ + G +P+ +T N L++ LC+N +EA+ L +++N+ + PD T + Y K
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE-PDSYTYNTLIAGYCKGG 335
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYN 357
A + + N D Y LI+GLC N A E L KG+ P+ YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
LI L +G EA + MS+ G++P+ ++ +++ GLC + A L+ M++
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA 477
P +N++I Y + NA+ D+ML GV P+V+TYN+L+ K+
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 478 YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+ M+ KG P++ T+N+L+ + C R D AL L EM K PD +++ L+
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPV-QILFNMYCKLEEPVKAFNLFQDWLE 591
C G+ A + K+ ++ ++ P I+ + + + A LFQ+ ++
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 214/454 (47%), Gaps = 2/454 (0%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK 194
Y CE + + A + +L G + A ++ M +G PDV++ + CK
Sbjct: 105 YDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA 164
Query: 195 AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
A L+ M G N+V Y T++ G+ N + L+ M +G+ T N L+
Sbjct: 165 AL-RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLL 223
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
LC+ G +KE +K+L++++ +P+L T +F+ + E A + + +
Sbjct: 224 RVLCKKGDVKECEKLLDKVIKRGV-LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
+ DV+ YN LI GLCKN A Y +M+ +G+ PD++TYN LI K G + A
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
I+G G VPD+ +Y+ +I GLC + + RA L L + P I++N +I
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
+ A + M + G+ P V T+N L+ K G + A L + M++KG FPD+
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
T+N+LI + AL++ M+ G PD+ +Y L+ C ++ E Y +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
++ G + IL C+ + +A L ++
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 5/429 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
++ LC G+L+ A+R+ ++++G PDV T+N+++ GLCK ++A +L + M+ G
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK-MVNEG 316
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ TYNTLI GYC V A + G P++ T L+ LC G A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 268 KMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+ E L K I P+++ + ++A L NEM + + +V +N+L+N
Sbjct: 377 ALFNEALG--KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
GLCK ++ A G M+ KG PD FT+NILI + K A IL VM G+ P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
D +Y ++ GLC E M+ P +N++++ R + + A+
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLIGAACN 505
+ M V+P+ T+ LI K+G++ AY+L +M + TYN++I A
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
+ A +L +EMV + PD +Y +V C GN + +++++G +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 566 VQILFNMYC 574
+ + N C
Sbjct: 675 LGRVINCLC 683
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 212/457 (46%), Gaps = 8/457 (1%)
Query: 144 HAATVRL--LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR 201
++ T+R+ C + AA+RL M +G +V + +V G + + ++ L
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE-LFG 205
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+ML G L T+N L++ C V + L + G+ PN T N+ + LC+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
L A +M+ ++ PD++T + KN +F +A +M +E D Y
Sbjct: 266 ELDGAVRMVGCLIEQGPK-PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N LI G CK ++ LA + + G +PD FTY LI L EG+T A +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--V 439
GI P+ I Y +I+GL I+ A +L M ++P+ +N++++ G CK V
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN--GLCKMGCV 442
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
S+A +M+ G P++FT+N LI + + A + + ML G+ PDV TYN L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ C + ++ + MV+KG P+L ++ L+ C EA ++ +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 560 MNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRDS 596
D V L + +CK + A+ LF+ E+ + S
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K+E A+ + +M+ G PDV+T+N ++NGLCK E + + M+E G PNL T+
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY-KTMVEKGCAPNLFTF 534
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N L++ C +D+AL L M + + P+ VT L+ C+NG L A + ++
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
K T + + + + A L+ EM + D Y ++++G CK +N
Sbjct: 595 AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
L Y + EM++ G +P T +I L E + EA I+ M + G+VP+ ++
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 170/430 (39%), Gaps = 40/430 (9%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
T + C + ++A + + GF + T+ ++ L G E + LV
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
G Y +K Y V +A+ ++ M +P + N ++ L ++G+ +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
A K+ + D PD+ + T+ M + K A L N M E++VVAY ++
Sbjct: 130 AHKVYMR-MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
G + Y +ML GV T+N L+ L K+G +E +L + K G++
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL 248
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
P+ +Y + I+GLC ++ A ++ C++
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ---------------------------- 280
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
G P+V TYN LI K+ A +M+ +GL PD TYN LI C
Sbjct: 281 -------GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
A ++ + V G PD +Y L+ C G T A + + L G+ P
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK----P 389
Query: 566 VQILFNMYCK 575
IL+N K
Sbjct: 390 NVILYNTLIK 399
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 163/365 (44%), Gaps = 7/365 (1%)
Query: 230 KALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
KAL +++SM + G + T ++ L G+ + + M E +++ +++ + + V
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKL---GYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 289 F---MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ M +Y + + +A +++ M E V +YN +++ L + + A+ M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+G+ PD +++ I + + K + A +L MS G + ++Y ++ G +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
EL ML + + +N ++ + + DV D ++K GV PN+FTYN I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
+ G + A + ++ +G PDV+TYN LI C A +MV +G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
PD +Y L+ C G + AE + +G + D + L + C E +A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 586 FQDWL 590
F + L
Sbjct: 379 FNEAL 383
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 3/395 (0%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+GK++ A R M+Q+GF+PD T I+ LC+ GL+ +A W R+M++ G PNL+
Sbjct: 230 DGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI-WYFRKMIDLGFKPNLI 288
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+ +LI G C S+ +A + M G +PN T L+ LC+ G ++A ++ ++
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ D P++ T T + Y K + +A L++ M++ + +V Y LING CK
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
AY M +G +P+ +TYN I +L K+ + EA +L G+ D ++Y +
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPI-VWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I+ C DI +A +C +N + + N++I + R K + + L++
Sbjct: 469 LIQEQCKQNDINQALA-FFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G+ P TY ++I + K G+I A M G PD TY LI C D A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
+L M+ +G P ++ L E C R ++ A
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 191/438 (43%), Gaps = 3/438 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+L A+ + M +G P T N ++ ++GL+E A + + EM G +P+ +
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN-VFDEMSVRGVVPDSSS 219
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y ++ G + +A + M G P+ TC +++ ALCENG + A +++
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D P+L+ T +D K QAF + EM +N + +V + LI+GLCK
Sbjct: 280 -DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 335 NLAYGYACEMLKKGVL-PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
A+ ++++ P+ TY +IG KE K A + M + G+ P+ +Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I G C RA EL+ M + +P +N ID + A + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ + TY LI K +I +A + M G D+ N+LI A C + +
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+L + +V G P +YT ++ C G+ A + + + + G + D L +
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 574 CKLEEPVKAFNLFQDWLE 591
CK +A L++ ++
Sbjct: 579 CKKSMVDEACKLYEAMID 596
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 176/372 (47%), Gaps = 4/372 (1%)
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
+++ + + +++A+ + M + G+ P+ +T N ++ E G ++ A+ + +E ++
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE-MSVR 211
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+PD + + + F++ + +A M Q D +++ LC+N L+N A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
Y +M+ G P+ + LI L K+G ++A +L M + G P+ ++ +I G
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVH 455
LC R L+ L KP V + G CK+ ++ A + M + G+
Sbjct: 332 LC-KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
PNV TY LI H K+G+ RAY L M +G P++ TYN I + C A +L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
+ G D ++YT L++E C + + +A + ++ K+G D IL +C+
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 576 LEEPVKAFNLFQ 587
++ ++ LFQ
Sbjct: 511 QKKMKESERLFQ 522
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 107 LDNMLKGSLERLKMMRENISLVK--IGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQ 164
L+N+L + R K M+E+ L + + L + +YT + + C EG ++ A++
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT---SMISCYCKEGDIDLALKYF 556
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
M + G +PD FT+ +++GLCK ++++A L M++ G P VT TL YC
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
N A+ L + D + T LV LC + A +++L D D V
Sbjct: 616 RNDSANAMILLEPL-DKKLWIR--TVRTLVRKLCSEKKVGVAALFFQKLLEKDSS-ADRV 671
Query: 285 TSTVF 289
T F
Sbjct: 672 TLAAF 676
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 229/460 (49%), Gaps = 10/460 (2%)
Query: 140 SYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL 199
S E + + + K + I L M G +++T++ +N C+ + A +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL-AI 132
Query: 200 VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
+ +M++ G P++VT N+L+ G+C N + +A+ L M + G QP+ VT LVH L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 260 NGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVV 319
+ EA ++E ++ PDLVT ++ K E A +L N+M + +E DVV
Sbjct: 193 HNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
YN +I+GLCK + M+ A+ +M KG+ PD FTYN LI L G+ +A +L M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM-VPKPIVWNLIIDLYGRCKD 438
+ I PD + + +I + +V A++L M+ + P + +N +I + + K
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
V + M + G+ N TY LI ++ + A + ++M++ G+ PD++TYN+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
L+ CN + + AL + M ++ + D+++YT ++ C G ++ + + + G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 559 LMNDHVPVQILFNMYCK--LEEPVKAFNLFQDWLESKRDS 596
+ + V + + +C+ L+E A ++E K D
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADAL-----FVEMKEDG 526
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 20/339 (5%)
Query: 266 AKKMLEEILNDD-----------KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
++K+L+++ DD + P +V + + K +F SL +M+ +
Sbjct: 47 SRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 106
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
++ Y++ IN C+ ++LA +M+K G P T N L+ + EA
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
++ M +MG PD +++ ++ GL A L+ M+ P + + +I+ G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN--G 224
Query: 435 RCK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
CK D++ +L + M K + +V YN +I K ++ A+ L +M TKG+
Sbjct: 225 LCKRGEPDLALNLLNK--MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
PDV TYN LI CN A +L +M++K PDL+ + L+ G EAE+
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 551 YAKILKSG-LMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
Y +++KS D V L +CK + + +F++
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A L+ +M ++ +V ++ L++ + K +L +M G+ + +TY+I I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + A ILG M K+G P ++ ++ G C I A L+ M+
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + + ++ + S A+ + M+ G P++ TY A+I K G A +L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+M + DVV YN +I C + D A L +M KG +PD+ +Y L+ C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
G +A + +L+ + D V L + + K + V+A L+ + ++SK
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + LC GK+E L + KG P+V T+ +++G C+ GL E+A D L EM
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA-DALFVEM 522
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
E GPLPN TYNTLI+ + L M G + T ++ + L +G L
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRL 581
Query: 264 KEA 266
++
Sbjct: 582 DKS 584
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 206/426 (48%), Gaps = 11/426 (2%)
Query: 157 LEAAIRLQRI---------MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
++AA++L + M P VF +N +++GLCK M A + L EML
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA-EQLFDEMLARR 244
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
LP+L+TYNTLI GYC + +K+ + M I+P+ +T N L+ L + G +++A+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+L+E + D +PD T ++ D Y N + A ++ + ++++ ++L+N
Sbjct: 305 NVLKE-MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LCK + A + KG++P+ YN +I ++G A + M K G+ PD
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
++Y +IR C ++ A++ + M + P +N++I YGR +
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M G PNV +Y LI K + A +K +M +G+ P V YN+LI C+
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ A + +EM++KG +L++Y L+ + G EAE+ +I + GL D
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 568 ILFNMY 573
L + Y
Sbjct: 604 SLISGY 609
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 219/446 (49%), Gaps = 18/446 (4%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G E + +++ M P + T N ++ GL K G++E A + L +EM + G +P+
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL-KEMKDLGFVPD 318
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
T++ L GY + + AL +Y + D+G++ N TC+IL++ALC+ G +++A E
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA----E 374
Query: 272 EILNDDKD---IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
EIL + +P+ V +D Y + + + A M + M+ D +AYN LI
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
C+ M A +M KGV P TYNILIG ++ + + IL M G +P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
+SY +I LC ++ A+ + M + + PK ++N++ID + +A
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI---GAACN 505
MLK G+ N+ TYN LI +G + A L E+ KGL PDV TYN LI G A N
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
++ + L EM + G +P L +Y L+ C + + E + ++ L D +
Sbjct: 615 VQR---CIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLV 667
Query: 566 VQILFNMYCKLEEPVKAFNLFQDWLE 591
+ + Y + KAFNL + +E
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 206/459 (44%), Gaps = 68/459 (14%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K EAA+ + V G + +T + ++N LCK G +EKA + L REM + G +PN V Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIY 392
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
NT+I GYC + A +M G++P+ + N L+ CE G ++ A+K + ++
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN---- 331
P + T + + Y + EF + F + EM N +VV+Y LIN LCK
Sbjct: 453 KGVS-PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 332 ------------------QLMNL-------------AYGYACEMLKKGVLPDAFTYNILI 360
++ N+ A+ ++ EMLKKG+ + TYN LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
L GK EA +L +S+ G+ PD +Y +I G F ++ R L M + +
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 421 P-----------------------------KP--IVWNLIIDLYGRCKDVSNAILTRDLM 449
P KP +V+N ++ Y D+ A + M
Sbjct: 632 PTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
++ + + TYN+LIL +K G + SL +EM + + P+ TYN+++ C ++ +
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
A REM +KG D+ ELV +KEAE
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 181/371 (48%), Gaps = 7/371 (1%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
+LE P+ Y I+ ++ V K L L++ M I P+ N+L+ LC+
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+ +A+++ +E+L + +P L+T +D Y K ++F + M+ + +E ++ +N
Sbjct: 230 MNDAEQLFDEMLAR-RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
L+ GL K ++ A EM G +PDAFT++IL K A +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G+ + + +++ LC + I +A+E+L + +VP +++N +ID Y R D+ A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+ + M K G+ P+ YN LI + G + A +M KG+ P V TYN+LIG
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
D + +EM G P+++SY L+ +C+ +K E A+I+K + +
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI--NCLCKGSKLLE---AQIVKRDMEDR 523
Query: 563 HVPVQI-LFNM 572
V ++ ++NM
Sbjct: 524 GVSPKVRIYNM 534
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +GK+E A R + M++KG ++ T+N +++GL G + +A D L+ E+ G P+
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL-EISRKGLKPD 598
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ TYN+LI GY +V + + LY M +GI+P T ++L+ +LC KE ++ E
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLC----TKEGIELTE 653
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAF---------------------------- 303
+ + PDL+ + Y + + +AF
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 304 -------SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
SL +EM ME + YN+++ G C+ + AY + EM +KG L D
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773
Query: 357 NILIGALWKEGKTREACYILGVMS 380
N L+ L +E +++EA ++ M+
Sbjct: 774 NELVSGLKEEWRSKEAEIVISEMN 797
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+A L+ +R + + +L++ L K + + +L+ P F Y I
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
A K + + M I P Y V+I GLC + + A++L ML ++
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P I +N +ID Y + + + R+ M + P++ T+N L+ K+G + A ++
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+EM G PD T+++L + + AL + V G + + + + L+ C
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
G ++AEE + + GL+ + V + + YC+ + V A
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + LC KL A ++R M +G P V +N +++G C G +E A + +EM
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF-SKEM 555
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L+ G NLVTYNTLI G + +A L ++ G++P+ T N L+ G++
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ-AFSLWNEMRQNSMEVDVVAYN 322
+ + EE+ P L T + + +E I+ L+ EM S++ D++ YN
Sbjct: 616 QRCIALYEEMKRSGIK-PTLKTYHLLIS--LCTKEGIELTERLFGEM---SLKPDLLVYN 669
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+++ + M A+ +M++K + D TYN LI K GK E ++ M+
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRA 407
+ P+ +Y ++++G C +D + A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSA 754
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 2/240 (0%)
Query: 354 FTYNILIGALWKEGK-TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
F+Y +L+ L E K EA + + GI P S +++ L + +
Sbjct: 110 FSY-LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFL 168
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
+L + P ++ I + DV + + M ++P+VF YN LI K
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
+ A L +EML + L P ++TYN LI C + + + ++R M P LI++
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
L++ G ++AE ++ G + D ILF+ Y E+ A +++ ++S
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 142/322 (44%), Gaps = 17/322 (5%)
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
+ L + ++ A+ +L +L D ST F +E AFSL + ++
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSD--------STPFASP----KELFSAFSLSSPSLKH- 108
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+ + +VL+N ++++++ A + +G+ P + + +L+ L K + R
Sbjct: 109 -DFSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTI 164
Query: 374 YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
+ + + P + Y I+ D+ + EL M ++ + P ++N++ID
Sbjct: 165 NVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGL 224
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
+ K +++A D ML + P++ TYN LI + K+GN +++ ++E M + P +
Sbjct: 225 CKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
+T+N L+ + A + +EM G PD +++ L + A Y
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 554 ILKSGLMNDHVPVQILFNMYCK 575
+ SG+ + IL N CK
Sbjct: 345 AVDSGVKMNAYTCSILLNALCK 366
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 231/498 (46%), Gaps = 43/498 (8%)
Query: 133 RGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC----- 187
RG+A ++ H ++ LC + A+ L R M + +PDVF++N ++ G C
Sbjct: 136 RGFA--FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 188 ------------------------------KVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
K G M++A +L +EM G +LV Y +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL-KEMKFMGLEADLVVYTS 252
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
LI+G+C +D+ L+ + + G P +T N L+ C+ G LKEA ++ E ++ +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI--E 310
Query: 278 KDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ + P++ T T +D + +A L N M + E + V YN++IN LCK+ L+
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG--IVPDEISYKVM 394
A M K+ PD TYNIL+G L +G EA +L +M K PD ISY +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I GLC + + +A ++ ++ L + N++++ + DV+ A+ + +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
N TY A+I K+G + A L +M L P V YN L+ + C S D A +
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
L EM + + PD++S+ ++ S G+ K AE + ++GL D L N +
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 575 KLEEPVKAFNLFQDWLES 592
KL +A + F ++S
Sbjct: 611 KLGYLDEAISFFDKMVDS 628
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 222/464 (47%), Gaps = 22/464 (4%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++G C +S + C GK++ A+ + M G D+ + ++ G C G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+++ L E+LE G P +TYNTLI+G+C + + +A ++ M + G++PN T
Sbjct: 263 LDRGK-ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L+ LC G KEA ++L ++ D++ P+ VT + ++ K+ A + M++
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEE-PNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL--PDAFTYNILIGALWKEGKT 369
D + YN+L+ GLC ++ A MLK PD +YN LI L KE +
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
+A I ++ + D ++ +++ D+ +A EL + ++ +V + +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 430 IDLYGRCK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
ID G CK +V+ +L + M + P+VF YN L+ + K G++ +A+ L EEM
Sbjct: 501 ID--GFCKTGMLNVAKGLLCK--MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
FPDVV++N++I + A L M + G PDL +Y++L+ G
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 546 EAEERYAKILKSGLMND-HVPVQILFNMYC-------KLEEPVK 581
EA + K++ SG D H+ +L YC KL E VK
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVL--KYCISQGETDKLTELVK 658
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 207/422 (49%), Gaps = 4/422 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + +R C G+L+ L ++++G P T+N ++ G CK+G +++A + + M
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE-IFEFM 308
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+E G PN+ TY LI G C V +AL L + M + +PN VT NI+++ LC++G +
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS--MEVDVVAY 321
+A +++E ++ + PD +T + + + +A L M ++S + DV++Y
Sbjct: 369 ADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N LI+GLCK ++ A +++K D T NIL+ + K G +A + +S
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
IV + +Y MI G C + AK LL M + + P +N ++ + +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A + M + P+V ++N +I +K+G+I A SL M GL PD+ TY+ LI
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
L D A+ +MV G PD +++ +G T + E K++ ++
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Query: 562 DH 563
D
Sbjct: 668 DK 669
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 187/415 (45%), Gaps = 38/415 (9%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R C G+L+ A + M+++G P+V+T+ +++GLC VG ++A L+ M+E
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ-LLNLMIEKD 347
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
PN VTYN +I C V A+ + M +P+ +T NIL+ LC G L EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 268 KMLEEILNDDK--------------------------DIPDL----------VTSTVFMD 291
K+L +L D DI DL VT+ + ++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
K + +A LW ++ + + + Y +I+G CK ++N+A G C+M + P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
F YN L+ +L KEG +A + M + PD +S+ +MI G DI A+ LL
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M + P ++ +I+ + + + AI D M+ G P+ ++++ +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH-DFALQLRREMVQKGHR 525
G + L ++++ K + D ++ CN ++ D A +L R K R
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 200/458 (43%), Gaps = 7/458 (1%)
Query: 140 SYTEHAATVRLLCLEG--KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
+++E +R LC + +L+ A+ + + V G F N+++ L + E A
Sbjct: 35 AFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGS-SLAFAGNNLMAKLVRSRNHELAFS 93
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
+ R+MLE N V+ + L++ Y + A + + M G N NIL+ L
Sbjct: 94 F-YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGL 152
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C N +A +L E+ + +PD+ + + + + +E +A L NEM+ +
Sbjct: 153 CRNLECGKAVSLLREMRRNSL-MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+V + +LI+ CK M+ A G+ EM G+ D Y LI G+ +
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
+ + G P I+Y +IRG C + A E+ M+ + P + +ID
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
A+ +LM++ PN TYN +I K G + A + E M + PD +TYN
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGH--RPDLISYTELVRESCIRGNTKEAEERYAKIL 555
+L+G C D A +L M++ PD+ISY L+ C +A + Y ++
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 556 KSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
+ D V IL N K + KA L++ +SK
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 222/441 (50%), Gaps = 8/441 (1%)
Query: 134 GYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
GY E T ++ L LEGK+ A+ L MV+ G PDV T+N IVNG+C+ G
Sbjct: 153 GY--EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
A D L+R+M E ++ TY+T+I C +D A+ L+ M GI+ + VT N L
Sbjct: 211 LALD-LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
V LC+ G + +L+++++ + +P+++T V +D + K + +A L+ EM
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+ +++ YN L++G C ++ A M++ PD T+ LI + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 374 YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
+ +SK G+V + ++Y ++++G C I A+EL M+++ ++P + + +++D
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD-- 446
Query: 434 GRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
G C + + A+ + + K + + Y +I K G + A++L + KG+ P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
+V+TY ++I C S A L R+M + G+ P+ +Y L+R G+ + +
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 552 AKILKSGLMNDHVPVQILFNM 572
++ G D ++++ +M
Sbjct: 567 EEMKSCGFSADASSIKMVIDM 587
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 201/406 (49%), Gaps = 4/406 (0%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G +++T N ++N C+ A+ L + M + G P+ T+NTLIKG V +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVF 289
A+ L M + G QP+ VT N +V+ +C +G A +L ++ +++++ D+ T +
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTI 234
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+D ++ A SL+ EM ++ VV YN L+ GLCK N +M+ + +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
+P+ T+N+L+ KEGK +EA + M GI P+ I+Y ++ G C + A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+L M+ N P + + +I Y K V + + + K G+ N TY+ L+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
+SG I A L +EM++ G+ PDV+TY +L+ C+ + AL++ ++ + ++
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
YT ++ C G ++A + + G+ + + ++ + CK
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 1/397 (0%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L +EM+ PLP+LV ++ + L + GI N T NI+++ C
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
A +L +++ + PD T + F + +A L + M +N + DV
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYE-PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V YN ++NG+C++ +LA +M ++ V D FTY+ +I +L ++G A +
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M GI ++Y ++RGLC LL M++ +VP I +N+++D++ +
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+ A M+ G+ PN+ TYN L+ + + A ++ + M+ PD+VT+
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
LI C ++ D +++ R + ++G + ++Y+ LV+ C G K AEE + +++ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 559 LMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
++ D + IL + C + KA +F+D +SK D
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 142/293 (48%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A +L+ EM ++ +V ++ + + + + NL + ++ G+ + +T NI+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ KT A +LG + K+G PD ++ +I+GL + + A L+ M+ N
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + +N I++ R D S A+ M + V +VFTY+ +I + + G I A SL
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+EM TKG+ VVTYN L+ C + L ++MV + P++I++ L+
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
G +EA E Y +++ G+ + + L + YC +A N+ + +K
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + +C GK+E A L + KG P+V T+ +++GLCK G + +A+ L+R+M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN-ILLRKM 534
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
E G PN TYNTLI+ + + + L M G + + +++ L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 203/439 (46%), Gaps = 3/439 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G ++ L MV+KG+ PDV ++ G + + KA V E+LE P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA--VRVMEILEKFGQPD 157
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ YN LI G+C +N +D A + M P+ VT NI++ +LC G L A K+L
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++L+D+ P ++T T+ ++ +A L +EM ++ D+ YN +I G+CK
Sbjct: 218 QLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+++ A+ + KG PD +YNIL+ AL +GK E ++ M P+ ++Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
++I LC D I A LL M + P ++ +I + R + AI + M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G P++ YN ++ K+G +A + ++ G P+ +YN + A +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
AL + EM+ G PD I+Y ++ C G EA E + V I+
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 572 MYCKLEEPVKAFNLFQDWL 590
+CK A N+ + +
Sbjct: 517 GFCKAHRIEDAINVLESMV 535
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 173/345 (50%), Gaps = 4/345 (1%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C+ + + + LEG ++ A++L M+ +G PD+FT+N I+ G+CK G++++A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
+ +VR + G P++++YN L++ ++ L + M PN VT +IL+
Sbjct: 284 E-MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
LC +G ++EA +L+ ++ + PD + + + + A M +
Sbjct: 343 LCRDGKIEEAMNLLK-LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
D+V YN ++ LCKN + A ++ + G P++ +YN + ALW G A +++
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M GI PDEI+Y MI LC + + A ELL M + P + +N+++ + +
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ +AI + M+ G PN TY LI +G YRA +++
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG--YRAEAME 564
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 6/375 (1%)
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
C + ++L+L +M G P+ + C L+ ++ +A +++E + + PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL--EKFGQPD 157
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
+ ++ + K A + + MR D V YN++I LC ++LA
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
++L P TY ILI A EG EA ++ M G+ PD +Y +IRG+C +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIID-LYGRCK-DVSNAILTRDLMLKFGVHPNVFT 460
+ RA E++ + P I +N+++ L + K + ++T+ M PNV T
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK--MFSEKCDPNVVT 335
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
Y+ LI + G I A +L + M KGL PD +Y+ LI A C D A++ M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
G PD+++Y ++ C G +A E + K+ + G + +F+ + +
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 581 KAFNLFQDWLESKRD 595
+A ++ + + + D
Sbjct: 456 RALHMILEMMSNGID 470
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M+ G PD T+N +++ LC+ G++++A + LV +M P++VTYN ++ G+C +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLV-DMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++ A+ + SM G +PN T +L+ + G+ EA ++ DLV
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN----------DLVRI 572
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNS 313
++ FK + F L N ++++S
Sbjct: 573 DAISEYSFK--RLHRTFPLLNVLQRSS 597
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 216/445 (48%), Gaps = 16/445 (3%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R C ++E AI L M KG LPD ++ I+ LCK + + D + + E G
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+P+ VTYNTLI + D+AL+ + G + +++ + +VHALC+ G + EAK
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
++ E+L+ PD+VT T ++ + + E +A L M + + + V+Y L+NG
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 328 LCKN-------QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
+C+ ++MN++ + P++ TY++++ L +EGK EAC ++ M
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWS-------PNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
G P + ++++ LC D A++ + LN + + +I + + ++
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
A+ D M H +VFTY L+ K G I A L ++ML KG+ P VTY +I
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 501 GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
C + D + + +M+ + + Y +++ + C+ G +EA+ K+L++
Sbjct: 672 HRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASR 729
Query: 561 NDHVPVQILFNMYCKLEEPVKAFNL 585
+D L Y K P+ A+ +
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAYKV 754
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 206/424 (48%), Gaps = 4/424 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+L A+++ +M + G P++ N ++ + +EKA +L R M G +PN+VT
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLER-MQVVGIVPNVVT 314
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN +I+GYC ++ V++A+ L M G P++V+ ++ LC+ + E + +++++
Sbjct: 315 YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ +PD VT + K+ +A + ++ +D + Y+ +++ LCK M
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 335 NLAYGYACEMLKKG-VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A EML KG PD TY ++ + G+ +A +L VM G P+ +SY
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKF 452
++ G+C + A+E++ + P I +++I+ R +S A + R+++LK
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK- 553
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G P N L+ + + G + A EE L KG +VV + +I C D A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L + +M D+ +YT LV +G EA E K+L G+ V + + +
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 573 YCKL 576
YC++
Sbjct: 674 YCQM 677
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 188/435 (43%), Gaps = 43/435 (9%)
Query: 158 EAAIRLQRIMVQKGF--LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+ + R+ +M ++G P+ F+ ++ + G + A L M G PNL+
Sbjct: 224 QGSRRVLVLMKRRGIYRTPEAFSR--VMVSYSRAGQLRDALKVLTL-MQRAGVEPNLLIC 280
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
NT I + N ++KAL M GI PN VT N ++ C+ ++EA ++LE+ ++
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLED-MH 339
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLM 334
+PD V+ M + K + ++ L +M +++ + D V YN LI+ L K+
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM-SKMGIVPDEISYKV 393
+ A + + +KG D Y+ ++ AL KEG+ EA ++ M SK PD ++Y
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ G C ++ +AK+LL +M G
Sbjct: 460 VVNGFCRLGEVDKAKKLL-----------------------------------QVMHTHG 484
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
PN +Y AL+ ++G A + P+ +TY++++ A
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+ REMV KG P + L++ C G T EA + + L G + V + + +
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Query: 574 CKLEEPVKAFNLFQD 588
C+ +E A ++ D
Sbjct: 605 CQNDELDAALSVLDD 619
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 165/390 (42%), Gaps = 36/390 (9%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL-PNLVTYNTLIKGYCTVNS 227
+KGF D ++ IV+ LCK G M +A D L+ EML G P++VTY ++ G+C +
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKD-LINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
VDKA L M G +PN V+ L++ +C G EA++M+ + + P+ +T +
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-NMSEEHWWSPNSITYS 528
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
V M + + +A + EM V N+L+ LC++ + A + E L K
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G + + +I + + A +L M + D +Y ++ L I A
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 648
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLY-------------------GRCKDVSNAILTR-- 446
EL+ ML+ + P P+ + +I Y +C+ + N ++ +
Sbjct: 649 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLC 708
Query: 447 ------------DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
+L+ + T AL+ ++K G AY + M + L PDV
Sbjct: 709 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVK 768
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGH 524
L D A +L +V++GH
Sbjct: 769 MCEKLSKRLVLKGKVDEADKLMLRLVERGH 798
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 7/289 (2%)
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV--LPDAFTYNILI 360
F W + RQ D + Y ++ L K +L + M ++G+ P+AF+ ++
Sbjct: 193 FFYWAD-RQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV- 250
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + G+ R+A +L +M + G+ P+ + I + +A L M +V
Sbjct: 251 -SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + +N +I Y V AI + M G P+ +Y ++ K I L
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 481 KEEMLTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
++M + GL PD VTYN LI D AL ++ +KG R D + Y+ +V C
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 540 IRGNTKEAEERYAKILKSG-LMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
G EA++ ++L G D V + N +C+L E KA L Q
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
D + Y M+ L + ++ +L M + P ++ ++ Y R + +A+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
LM + GV PN+ N I V++ + +A E M G+ P+VVTYN +I C+L
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS-GLMNDHVP 565
+ A++L +M KG PD +SY ++ C E + K+ K GL+ D V
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 566 VQILFNMYCKLEEPVKAFNLFQDWLE 591
L +M K + +A +D E
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQE 411
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 208/430 (48%), Gaps = 10/430 (2%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LCLEG++ A L MV KG DV T+ IVNG+CK+G + A + L+ +M E P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN-LLSKMEETHIKP 294
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V Y+ +I C A YL+S M + GI PN T N ++ C G +A+++L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+++ + + PD++T + K + +A L +EM + D V YN +I G CK
Sbjct: 355 RDMIEREIN-PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ + A M PD T+N +I + + E +L +S+ G+V + +
Sbjct: 414 HN----RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDL 448
Y +I G C ++ A++L M+++ + P I N++ LYG C++ + A+ ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEEALELFEV 527
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+ + + YN +I K + A+ L + G+ PDV TYN++I C +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
A L +M GH PD +Y L+R G ++ E +++ +G D +++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 569 LFNMYCKLEE 578
+ C++ +
Sbjct: 648 AEEIICRVSD 657
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 203/443 (45%), Gaps = 23/443 (5%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC----------------KVGL 191
++ C KL ++ + + GF PDV T N +++GLC + G
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+E L +M+E G P ++T+NTLI G C V +A L + M G+ + VT
Sbjct: 208 LEAVA--LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+V+ +C+ G K A +L + + + PD+V + +D K+ A L++EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ +V YN +I+G C + A +M+++ + PD T+N LI A KEGK E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A + M I PD ++Y MI G C AK M + + P + +N IID
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIID 440
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
+Y R K V + + + G+ N TYN LI + N+ A L +EM++ G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
D +T N+L+ C + AL+L + D ++Y ++ C EA + +
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 552 AKILKSGLMNDHVPVQILFNMYC 574
+ G+ D ++ + +C
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFC 583
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 197/427 (46%), Gaps = 63/427 (14%)
Query: 199 LVREMLEFGPLP-NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L R+M E +P N+ ++N LIK +C + + +L + + G QP+ VT N L+H L
Sbjct: 128 LYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C + D ++ + + Y F++A +L+++M + +
Sbjct: 187 C---------------------LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
V+ +N LINGLC + A +M+ KG+ D TY ++ + K G T+ A +L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID---LYG 434
M + I PD + Y +I LC D A+ L ML + P +N +ID +G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF---- 490
R D L RD M++ ++P+V T+NALI A VK G ++ A L +EML + +F
Sbjct: 346 RWSDAQR--LLRD-MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 491 ---------------------------PDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
PDVVT+N +I C + D +QL RE+ ++G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC---KLEEPV 580
+ +Y L+ C N A++ + +++ G+ D + IL +C KLEE +
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 581 KAFNLFQ 587
+ F + Q
Sbjct: 523 ELFEVIQ 529
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 212/444 (47%), Gaps = 21/444 (4%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
+ AI L R M + ++++ N ++ C + + + + + G P++VT+NT
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LTKLGFQPDVVTFNT 181
Query: 218 LIKGYCTVNSVDKALYLYSSMADTG---------------IQPNRVTCNILVHALCENGH 262
L+ G C + + +AL L+ M +TG + P +T N L++ LC G
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+ EA ++ +++ I D+VT ++ K + A +L ++M + ++ DVV Y+
Sbjct: 242 VLEAAALVNKMVGKGLHI-DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+I+ LCK+ + A EML+KG+ P+ FTYN +I G+ +A +L M +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
I PD +++ +I + + A++L ML+ + P + +N +I YG CK N
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI--YGFCK--HNR 416
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
M P+V T+N +I + ++ + L E+ +GL + TYN LI
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
C + + + A L +EM+ G PD I+ L+ C +EA E + I S + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 563 HVPVQILFNMYCKLEEPVKAFNLF 586
V I+ + CK + +A++LF
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 133/302 (44%), Gaps = 22/302 (7%)
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
HYFK+ + A ++ M ++ V N +I + ++A +M + +
Sbjct: 82 HYFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ +++NILI K + G ++K+G PD +++ ++ GLC + I A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M+ + A+ D M++ G+ P V T+N LI
Sbjct: 200 GYMVETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G + A +L +M+ KGL DVVTY ++ C + AL L +M + +PD++ Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ ++ C G+ +A+ ++++L+ G+ + + + +C A L +D +E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 592 SK 593
+
Sbjct: 360 RE 361
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 211/443 (47%), Gaps = 13/443 (2%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA---HDWLVREMLEFGPLPN 211
G LE ++ M ++ T+N ++NG K G ME+A H + R P
Sbjct: 252 GDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP--- 308
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
++N LI+GYC D A + M + GI P T NI + ALC+ G + +A+++L
Sbjct: 309 -YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ PD+V+ M Y K +F++A L++++R + +V YN LI+GLC++
Sbjct: 368 SMA-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A EM + + PD TY L+ K G A + M + GI PD +Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 392 KVMIRGLCFDRDIVRAKELLWCML-NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
G D +A L M+ + P ++N+ ID + ++ AI + +
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
+ G+ P+ TY +I ++++G A +L +EML K L+P V+TY +LI +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A Q EM ++G RP+++++ L+ C GN EA K+ + G+ + +L
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 571 NMYCKLEEPVKAFNLFQDWLESK 593
+ C E+ + L+++ L+ +
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKE 685
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 215/477 (45%), Gaps = 28/477 (5%)
Query: 103 VFNA-LDNMLK-GSLER-----LKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEG 155
FN LD+ K G LER L+M R NI E+S + + G
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNI------------EFSEVTYNILINGFSKNG 287
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-LVREMLEFGPLPNLVT 214
K+E A R M + GF ++ N ++ G CK GL + A W + EML G P T
Sbjct: 288 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA--WGVTDEMLNAGIYPTTST 345
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN I C +D A L SSMA P+ V+ N L+H + G EA + +++
Sbjct: 346 YNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D P +VT +D ++ A L EM + DV+ Y L+ G KN +
Sbjct: 402 AGDIH-PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI-VPDEISYKV 393
++A EML+KG+ PD + Y + G + +A + M PD Y V
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
I GLC ++V+A E + +VP + + +I Y A D ML+
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
++P+V TY LI H K+G + +A+ EM +G+ P+V+T+N L+ C + D A
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
+ +M ++G P+ SYT L+ ++C +E + Y ++L + D + LF
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 189/428 (44%), Gaps = 42/428 (9%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++KGFLP V N ++ L +M KA + M+E G +P ++T+NT++
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKA-SAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+++ ++ M I+ + VT NIL++ +NG ++EA++
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR------------------ 294
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+MR++ V ++N LI G CK L + A+G EML
Sbjct: 295 ------------------FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
G+ P TYNI I AL G+ +A +L M+ PD +SY ++ G V
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVE 392
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A L + + P + +N +ID ++ A ++ M + P+V TY L+
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR- 525
VK+GN+ A + +EML KG+ PD Y L D A +L EMV H
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
PDL Y + C GN +A E KI + GL+ DHV + Y + + A NL
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 586 FQDWLESK 593
+ + L +
Sbjct: 573 YDEMLRKR 580
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 197/418 (47%), Gaps = 41/418 (9%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD--WLVREMLEFGP 208
C +L A+ M++ G P + T ++NG C+ ++ +D ++ +M+ G
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR---GDRVYDALYMFDQMVGMGY 182
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
PN+V YNT+I G C VD AL L + M GI P+ VT N L+ LC +G +A +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
M+ + + PD+ T +D K +A + EM + S++ D+V Y++LI GL
Sbjct: 243 MVS-CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
C ++ A M+ KG PD TY+ILI K K + MS+ G+V +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
++Y ++I+G C RA +L +V+ I R
Sbjct: 362 VTYTILIQGYC------RAGKL---------------------------NVAEEIFRR-- 386
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
M+ GVHPN+ TYN L+ +G I +A + +M G+ D+VTYN++I C
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
A + + +G PD+ +YT ++ +G +EA+ + K+ + G++ + V
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 8/410 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD---WLVREMLEFGPLPNL 212
KL+ ++ L MVQ LP + + +++ + K+ K +D +L +M G NL
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM----KKYDVVIYLWEQMQMLGIPHNL 116
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
T N L+ +C + + AL M G +P+ VT L++ C + +A M ++
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
++ P++V +D K+++ A L N M ++ + DVV YN LI+GLC +
Sbjct: 177 MVGMGYK-PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ A M K+ + PD FT+N LI A KEG+ EA M + + PD ++Y
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++I GLC + A+E+ M++ P + ++++I+ Y + K V + + M +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
GV N TY LI + ++G + A + M+ G+ P+++TYN+L+ C+ + A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
L + +M + G D+++Y ++R C G +A + Y + GLM D
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 5/390 (1%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L M++ PLP++ ++ L+ + D +YL+ M GI N TCNIL++ C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
L A L +++ + P +VT ++ + + A ++++M + +V
Sbjct: 128 RCSQLSLALSFLGKMIKLGHE-PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V YN +I+GLCK++ ++ A M K G+ PD TYN LI L G+ +A ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC-- 436
M+K I PD ++ +I + + A+E M+ + P + ++L+I YG C
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI--YGLCMY 304
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
+ A M+ G P+V TY+ LI + KS + L EM +G+ + VTY
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
+LI C + A ++ R MV G P++I+Y L+ C G ++A A + K
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+G+ D V I+ CK E A++++
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 235/465 (50%), Gaps = 20/465 (4%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ V LC + KLE A+ R K P V + N I++G CK+G ++ A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC-TV 248
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L+ G +P++ ++N LI G C V S+ +AL L S M G++P+ VT NIL G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 264 KEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD-VVAY 321
A +++ ++L DK + PD++T T+ + + L +M E++ ++
Sbjct: 309 SGAWEVIRDML--DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
+V+++GLCK ++ A +M G+ PD Y+I+I L K GK A ++ M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
I+P+ ++ ++ GLC ++ A+ LL ++++ +++N++ID Y + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A+ ++++ G+ P+V T+N+LI + K+ NI A + + + GL P VV+Y L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE-----AEERYAKILK 556
A N + +LRREM +G P ++Y+ + + C RG E ER + K
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 605
Query: 557 SGLMN--------DHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
GL + D + + C+++ AF +F + ++S+
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIMKSR 649
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 23/407 (5%)
Query: 152 CLEGKLEAAIRLQRIMVQKGF-LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C G ++ + L + M+ +GF L + + +++GLCK G +++A L +M G P
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS-LFNQMKADGLSP 396
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+LV Y+ +I G C + D AL+LY M D I PN T L+ LC+ G L EA+ +L
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ +++ + + D+V + +D Y K+ +A L+ + + + V +N LI G CK
Sbjct: 457 DSLISSGETL-DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
Q + A + G+ P +Y L+ A G T+ + M GI P ++
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 391 YKVMIRGLCF------------DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
Y V+ +GLC +R + K+ L M + + P I +N II R K
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA----YSLKEEMLTKGLFPDVV 494
+S A + ++M + + TYN LI + G I +A YSL+E+ ++ F
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF---- 691
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
Y LI A C + A++L +++ +G + Y+ ++ C R
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 13/368 (3%)
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
VD +LY+ M D + + + N +++ H +E KM + + + KD + ST
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWD-VYKEIKDKNEHTYST 192
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
V +D + ++ A + VV++N +++G CK +++A + C +LK
Sbjct: 193 V-VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G++P +++NILI L G EA + M+K G+ PD ++Y ++ +G I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALI 465
E++ ML+ + P I + ++ L G+C+ ++ ++ ML G N +++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTIL--LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 466 LAHV-KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
L+ + K+G I A SL +M GL PD+V Y+++I C L D AL L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
P+ ++ L+ C +G EA ++ SG D V I+ + Y K +A
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 585 LFQDWLES 592
LF+ +E+
Sbjct: 490 LFKVVIET 497
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 181/400 (45%), Gaps = 44/400 (11%)
Query: 178 THNHIVNGLCKVGLMEKAHDWL-VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
T++ +V+GLC+ +E A +L E + GP ++V++N+++ GYC + VD A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP--SVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
++ G+ P+ + NIL++ LC G + EA ++ + +N PD VT + +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD-MNKHGVEPDSVTYNILAKGFHLL 305
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC--EMLKKGV-LPDA 353
A+ + +M + DV+ Y +L+ G C QL N+ G +ML +G L
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQC--QLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
++++ L K G+ EA + M G+ PD ++Y ++I GLC + + LW
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC---KLGKFDMALW- 419
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
L + M K I+ PN T+ AL+L + G
Sbjct: 420 -LYDEMCDKRIL------------------------------PNSRTHGALLLGLCQKGM 448
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ A SL + +++ G D+V YN++I + AL+L + +++ G P + ++
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L+ C N EA + I GL V L + Y
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 49/320 (15%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ + LC GK + A+ L M K LP+ TH ++ GLC+ G++ +A L+ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS-LLDSL 459
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ G ++V YN +I GY +++AL L+ + +TGI P+ T N L++ C+ ++
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMD-------------------------------- 291
EA+K+L+ ++ P +V+ T MD
Sbjct: 520 AEARKILD-VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 292 ---------------HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
H + R F + +M + D + YN +I LC+ + ++
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A+ + M + + + TYNILI +L G R+A + + + + + +Y +I+
Sbjct: 639 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Query: 397 GLCFDRDIVRAKELLWCMLN 416
C D A +L +L+
Sbjct: 699 AHCVKGDPEMAVKLFHQLLH 718
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 164/373 (43%), Gaps = 13/373 (3%)
Query: 227 SVDKALYLYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
S D +++ + + D + + + ++ H L KE + +LE++L ++ +
Sbjct: 63 SSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWES 122
Query: 286 STVFMDH--YFKNREFIQAFSLW--NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
+ + D + +R + SL+ +M+ ++ V +YN ++ + M Y
Sbjct: 123 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVY--- 179
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
K+ + TY+ ++ L ++ K +A L I P +S+ ++ G C
Sbjct: 180 ----KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
+ AK +L +VP N++I+ ++ A+ M K GV P+ TY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
N L G I A+ + +ML KGL PDV+TY +L+ C L + D L L ++M+
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 522 KGHRPD-LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
+G + +I + ++ C G EA + ++ GL D V I+ + CKL +
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 581 KAFNLFQDWLESK 593
A L+ + + +
Sbjct: 416 MALWLYDEMCDKR 428
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL-----------VREM 203
G ++ L+R M +G P T++ I GLC+ E + L +R+M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
G P+ +TYNT+I+ C V + A M + + T NIL+ +LC G++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
++A + + + + +T+ H K + A L++++ V + Y+
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEM-AVKLFHQLLHRGFNVSIRDYSA 730
Query: 324 LINGLCKNQLMN 335
+IN LC+ LMN
Sbjct: 731 VINRLCRRHLMN 742
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 235/465 (50%), Gaps = 20/465 (4%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ V LC + KLE A+ R K P V + N I++G CK+G ++ A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC-TV 248
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L+ G +P++ ++N LI G C V S+ +AL L S M G++P+ VT NIL G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 264 KEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD-VVAY 321
A +++ ++L DK + PD++T T+ + + L +M E++ ++
Sbjct: 309 SGAWEVIRDML--DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
+V+++GLCK ++ A +M G+ PD Y+I+I L K GK A ++ M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
I+P+ ++ ++ GLC ++ A+ LL ++++ +++N++ID Y + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A+ ++++ G+ P+V T+N+LI + K+ NI A + + + GL P VV+Y L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE-----AEERYAKILK 556
A N + +LRREM +G P ++Y+ + + C RG E ER + K
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 605
Query: 557 SGLMN--------DHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
GL + D + + C+++ AF +F + ++S+
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIMKSR 649
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 23/407 (5%)
Query: 152 CLEGKLEAAIRLQRIMVQKGF-LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C G ++ + L + M+ +GF L + + +++GLCK G +++A L +M G P
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS-LFNQMKADGLSP 396
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+LV Y+ +I G C + D AL+LY M D I PN T L+ LC+ G L EA+ +L
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ +++ + + D+V + +D Y K+ +A L+ + + + V +N LI G CK
Sbjct: 457 DSLISSGETL-DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
Q + A + G+ P +Y L+ A G T+ + M GI P ++
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 391 YKVMIRGLCF------------DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
Y V+ +GLC +R + K+ L M + + P I +N II R K
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA----YSLKEEMLTKGLFPDVV 494
+S A + ++M + + TYN LI + G I +A YSL+E+ ++ F
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF---- 691
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
Y LI A C + A++L +++ +G + Y+ ++ C R
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 13/368 (3%)
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
VD +LY+ M D + + + N +++ H +E KM + + + KD + ST
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWD-VYKEIKDKNEHTYST 192
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
V +D + ++ A + VV++N +++G CK +++A + C +LK
Sbjct: 193 V-VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G++P +++NILI L G EA + M+K G+ PD ++Y ++ +G I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALI 465
E++ ML+ + P I + ++ L G+C+ ++ ++ ML G N +++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTIL--LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 466 LAHV-KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
L+ + K+G I A SL +M GL PD+V Y+++I C L D AL L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
P+ ++ L+ C +G EA ++ SG D V I+ + Y K +A
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 585 LFQDWLES 592
LF+ +E+
Sbjct: 490 LFKVVIET 497
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 181/400 (45%), Gaps = 44/400 (11%)
Query: 178 THNHIVNGLCKVGLMEKAHDWL-VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
T++ +V+GLC+ +E A +L E + GP ++V++N+++ GYC + VD A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP--SVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
++ G+ P+ + NIL++ LC G + EA ++ + +N PD VT + +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD-MNKHGVEPDSVTYNILAKGFHLL 305
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC--EMLKKGV-LPDA 353
A+ + +M + DV+ Y +L+ G C QL N+ G +ML +G L
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQC--QLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
++++ L K G+ EA + M G+ PD ++Y ++I GLC + + LW
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC---KLGKFDMALW- 419
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
L + M K I+ PN T+ AL+L + G
Sbjct: 420 -LYDEMCDKRIL------------------------------PNSRTHGALLLGLCQKGM 448
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ A SL + +++ G D+V YN++I + AL+L + +++ G P + ++
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L+ C N EA + I GL V L + Y
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 49/320 (15%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ + LC GK + A+ L M K LP+ TH ++ GLC+ G++ +A L+ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS-LLDSL 459
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ G ++V YN +I GY +++AL L+ + +TGI P+ T N L++ C+ ++
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMD-------------------------------- 291
EA+K+L+ ++ P +V+ T MD
Sbjct: 520 AEARKILD-VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 292 ---------------HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
H + R F + +M + D + YN +I LC+ + ++
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A+ + M + + + TYNILI +L G R+A + + + + + +Y +I+
Sbjct: 639 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Query: 397 GLCFDRDIVRAKELLWCMLN 416
C D A +L +L+
Sbjct: 699 AHCVKGDPEMAVKLFHQLLH 718
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 165/373 (44%), Gaps = 13/373 (3%)
Query: 227 SVDKALYLYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
S D +++ + + D + + + ++ H L KE + +LE++L ++ +
Sbjct: 63 SSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWES 122
Query: 286 STVFMDH--YFKNREFIQAFSLW--NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
+ + D + +R + SL+ +M+ ++ V +YN ++ + M Y
Sbjct: 123 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYK-- 180
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
E+ K + TY+ ++ L ++ K +A L I P +S+ ++ G C
Sbjct: 181 -EIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
+ AK +L +VP N++I+ ++ A+ M K GV P+ TY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
N L G I A+ + +ML KGL PDV+TY +L+ C L + D L L ++M+
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 522 KGHRPD-LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
+G + +I + ++ C G EA + ++ GL D V I+ + CKL +
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 581 KAFNLFQDWLESK 593
A L+ + + +
Sbjct: 416 MALWLYDEMCDKR 428
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL-----------VREM 203
G ++ L+R M +G P T++ I GLC+ E + L +R+M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
G P+ +TYNT+I+ C V + A M + + T NIL+ +LC G++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
++A + + + + +T+ H K + A L++++ V + Y+
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEM-AVKLFHQLLHRGFNVSIRDYSA 730
Query: 324 LINGLCKNQLMN 335
+IN LC+ LMN
Sbjct: 731 VINRLCRRHLMN 742
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 221/462 (47%), Gaps = 18/462 (3%)
Query: 113 GSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGF 172
G LE + + + +V+IGL ++ + LCLEG++ A L MV KG
Sbjct: 206 GFLEAVALFDQ---MVEIGLTPVVITFN-----TLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 173 LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
DV T+ IVNG+CK+G + A + L+ +M E P++V Y+ +I C A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALN-LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
YL+S M + GI PN T N ++ C G +A+++L +++ + + PD++T +
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN-PDVLTFNALISA 375
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
K + +A L +EM + D V YN +I G CK+ + A M PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN----RFDDAKHMFDLMASPD 431
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
T+N +I + + E +L +S+ G+V + +Y +I G C ++ A++L
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M+++ + P I N++ LYG C++ + A+ +++ + + YN +I K
Sbjct: 492 EMISHGVCPDTITCNIL--LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+ A+ L + G+ PDV TYN++I C + A L +M GH PD +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
Y L+R G ++ E +++ +G D ++++ ++
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 203/443 (45%), Gaps = 23/443 (5%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC----------------KVGL 191
++ C KL ++ + + GF PDV T N +++GLC + G
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+E L +M+E G P ++T+NTLI G C V +A L + M G+ + VT
Sbjct: 208 LEAV--ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+V+ +C+ G K A +L + + + PD+V + +D K+ A L++EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ +V YN +I+G C + A +M+++ + PD T+N LI A KEGK E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A + M I PD ++Y MI G C AK M + + P + +N IID
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIID 440
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
+Y R K V + + + G+ N TYN LI + N+ A L +EM++ G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
D +T N+L+ C + AL+L + D ++Y ++ C EA + +
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 552 AKILKSGLMNDHVPVQILFNMYC 574
+ G+ D ++ + +C
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFC 583
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 60/432 (13%)
Query: 199 LVREMLEFGPLP-NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L R+M E +P N+ ++N LIK +C + + +L + + G QP+ VT N L+H L
Sbjct: 128 LYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C + EA + Y F++A +L+++M + +
Sbjct: 187 CLEDRISEALALF---------------------GYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
V+ +N LINGLC + A +M+ KG+ D TY ++ + K G T+ A +L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID---LYG 434
M + I PD + Y +I LC D A+ L ML + P +N +ID +G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF---- 490
R D L RD M++ ++P+V T+NALI A VK G ++ A L +EML + +F
Sbjct: 346 RWSDAQR--LLRD-MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 491 ---------------------------PDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
PDVVT+N +I C + D +QL RE+ ++G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAF 583
+ +Y L+ C N A++ + +++ G+ D + IL +C+ E+ +A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 584 NLFQDWLESKRD 595
LF+ SK D
Sbjct: 523 ELFEVIQMSKID 534
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 212/444 (47%), Gaps = 21/444 (4%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
+ AI L R M + ++++ N ++ C + + + + + G P++VT+NT
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LTKLGFQPDVVTFNT 181
Query: 218 LIKGYCTVNSVDKALYLYSSMADTG---------------IQPNRVTCNILVHALCENGH 262
L+ G C + + +AL L+ M +TG + P +T N L++ LC G
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+ EA ++ +++ I D+VT ++ K + A +L ++M + ++ DVV Y+
Sbjct: 242 VLEAAALVNKMVGKGLHI-DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+I+ LCK+ + A EML+KG+ P+ FTYN +I G+ +A +L M +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
I PD +++ +I + + A++L ML+ + P + +N +I YG CK N
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI--YGFCK--HNR 416
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
M P+V T+N +I + ++ + L E+ +GL + TYN LI
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
C + + + A L +EM+ G PD I+ L+ C +EA E + I S + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 563 HVPVQILFNMYCKLEEPVKAFNLF 586
V I+ + CK + +A++LF
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 132/300 (44%), Gaps = 22/300 (7%)
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
HYFK+ + A ++ M ++ V N +I + ++A +M + +
Sbjct: 82 HYFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ +++NILI K + G ++K+G PD +++ ++ GLC + I A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M+ + A+ D M++ G+ P V T+N LI
Sbjct: 200 GYMVETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G + A +L +M+ KGL DVVTY ++ C + AL L +M + +PD++ Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ ++ C G+ +A+ ++++L+ G+ + + + +C A L +D +E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 117 RLKMMRENISLVK-IGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPD 175
R K + E + L++ I RG + T + + C L AA L + M+ G PD
Sbjct: 444 RAKRVDEGMQLLREISRRGLVA--NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 176 VFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP-NLVTYNTLIKGYCTVNSVDKALYL 234
T N ++ G C+ +E+A + E+++ + + V YN +I G C + VD+A L
Sbjct: 502 TITCNILLYGFCENEKLEEALELF--EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ S+ G++P+ T N+++ C + +A + + + D+ PD T +
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK-MKDNGHEPDNSTYNTLIRGCL 618
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
K E ++ L +EMR N D ++ + + +L
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 115 LERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP 174
LE + E I + KI L A Y+ H +C K++ A L + G P
Sbjct: 518 LEEALELFEVIQMSKIDLDTVA--YNIIIHG-----MCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
DV T+N +++G C + A + L +M + G P+ TYNTLI+G +DK++ L
Sbjct: 571 DVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
S M G + T +V L +G L ++
Sbjct: 630 ISEMRSNGFSGDAFTIK-MVADLITDGRLDKS 660
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 212/441 (48%), Gaps = 2/441 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ +LC GKL+ A L+ M + G P+V T N +V+ LCK +++A + EM
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC-AMFEEMDYKV 442
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ +T+ +LI G V VD A +Y M D+ + N + L+ +G ++
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
K+ ++++N + PDL +MD FK E + +++ E++ D +Y++LI+G
Sbjct: 503 KIYKDMINQNCS-PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
L K N Y M ++G + D YNI+I K GK +A +L M G P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
++Y +I GL + A L + + ++++ +ID +G+ + A L +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+++ G+ PN++T+N+L+ A VK+ I A + M P+ VTY +LI C +R
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ A +EM ++G +P ISYT ++ GN EA + + +G + D
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 568 ILFNMYCKLEEPVKAFNLFQD 588
+ + AF+LF++
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEE 822
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 184/424 (43%), Gaps = 7/424 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M GF P V T +V G K + + +D +V+ M +F P Y TLI + VN
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYD-VVQMMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
D L L+ M + G +P L+ + G + A +L+E+ + D D+V
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD-ADIVLY 241
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
V +D + K + A+ ++E+ N ++ D V Y +I LCK ++ A + K
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+P + YN +I GK EA +L G +P I+Y ++ L R + +
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL---RKMGK 358
Query: 407 AKELLWCM--LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
E L + P +N++ID+ R + A RD M K G+ PNV T N +
Sbjct: 359 VDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
+ KS + A ++ EEM K PD +T+ LI + D A ++ +M+
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
R + I YT L++ G ++ + Y ++ D + + K EP K
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 585 LFQD 588
+F++
Sbjct: 539 MFEE 542
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 2/335 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+ E ++ + M+ + PD+ N ++ + K G EK + E+ +P+ +
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR-AMFEEIKARRFVPDARS 554
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y+ LI G ++ L+ SM + G + NI++ C+ G + +A ++LEE+
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ P +VT +D K +A+ L+ E + +E++VV Y+ LI+G K +
Sbjct: 615 TKGFE-PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ AY E+++KG+ P+ +T+N L+ AL K + EA M ++ P++++Y ++
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I GLC R +A M M P I + +I + +++ A D G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
P+ YNA+I A+SL EE +GL
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 40/434 (9%)
Query: 139 YSYTEHAAT--VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
Y T H T +R EG++++A+ L M D+ +N ++ KVG ++ A
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
+ E+ G P+ VTY ++I C N +D+A+ ++ + P N ++
Sbjct: 259 KFF-HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
G EA +LE IP ++ + K + +A ++ EM++++
Sbjct: 318 YGSAGKFDEAYSLLER-QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP- 375
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
++ YN+LI+ LC+ ++ A+ M K G+ P+ T NI++ L K K EAC +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY--- 433
M PDEI++ +I GL + A ++ ML++ IV+ +I +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 434 GR-------CKDVSNAILTRDL---------MLKFG----------------VHPNVFTY 461
GR KD+ N + DL M K G P+ +Y
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
+ LI +K+G Y L M +G D YN++I C + A QL EM
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 522 KGHRPDLISYTELV 535
KG P +++Y ++
Sbjct: 616 KGFEPTVVTYGSVI 629
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 165/411 (40%), Gaps = 37/411 (9%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
V LC KL+ A + M K PD T +++GL KVG ++ A+ + +ML+
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK-VYEKMLDSD 477
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
N + Y +LIK + + +Y M + P+ N + + + G ++ +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 268 KMLEEILNDDKDIPDLVTSTVFM-----------------------------------DH 292
M EEI + +PD + ++ + D
Sbjct: 538 AMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ K + +A+ L EM+ E VV Y +I+GL K ++ AY E K + +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
Y+ LI K G+ EA IL + + G+ P+ ++ ++ L +I A
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M P + + ++I+ + + + A + M K G+ P+ +Y +I K+G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
NI A +L + G PD YN +I N A L E ++G
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 152/379 (40%), Gaps = 2/379 (0%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+YN+L+ + D + M+ G P+ TC +V + L+E +++ +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ-M 158
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ K P T + + +L+ +M++ E V + LI G K
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
++ A EM + D YN+ I + K GK A + G+ PDE++Y
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
MI LC + A E+ + N VP +N +I YG A + G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P+V YN ++ K G + A + EEM K P++ TYN+LI C D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+LR M + G P++ + +V C EA + ++ D + L +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 574 CKLEEPVKAFNLFQDWLES 592
K+ A+ +++ L+S
Sbjct: 458 GKVGRVDDAYKVYEKMLDS 476
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV--REMLEFGPLPNL 212
G+++ A + ++QKG P+++T N +++ L K E+ ++ LV + M E PN
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA---EEINEALVCFQSMKELKCTPNQ 727
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
VTY LI G C V +KA + M G++P+ ++ ++ L + G++ EA + +
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ +PD ++ + AFSL+ E R+ + + VL++ L KN
Sbjct: 788 -FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Query: 333 LMNLA 337
+ A
Sbjct: 847 CLEQA 851
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 207/450 (46%), Gaps = 37/450 (8%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ C ++ A+ L M++ G+ P + T + ++NG C + A LV +M+E G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMG 185
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ +T+ TLI G N +A+ L M G QPN VT ++V+ LC+ G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+L ++ + ++ STV +D K R A +L+ EM + +V+ Y+ LI+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTV-IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
LC + + A +M+++ + P+ T+N LI A KEGK EA + M K I PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK---------- 437
+Y +I G C + AK + M++ P + +N +I+ + + K
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 438 -------------------------DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
D NA + M+ GVHPN+ TYN L+ K+G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
+ +A + E + + P + TYN++I C + L + KG +PD+I Y
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMND 562
++ C +G +EA+ + K+ + G + D
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 214/441 (48%), Gaps = 8/441 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV---REMLEFGPLPNL 212
KL+ AI L MV+ LP +F N +++ + K+ K D ++ +M G NL
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM----KKFDLVISLGEKMQRLGISHNL 120
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
TYN LI +C + + AL L M G +P+ VT + L++ C + +A ++++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
++ PD +T T + F + + +A +L + M Q + ++V Y V++NGLCK
Sbjct: 181 MVEMGYR-PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
++LA+ +M + + Y+ +I +L K +A + M G+ P+ I+Y
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I LC A LL M+ + P + +N +ID + + + A D M+K
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
+ P++FTY++LI + A + E M++K FP+VVTYN LI C + D
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
++L REM Q+G + ++YT L+ + A+ + +++ G+ + + L +
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 573 YCKLEEPVKAFNLFQDWLESK 593
CK + KA +F+ SK
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSK 500
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+++ + C+ +L+ A + +M+ K P+V T+N ++NG CK +++ + L REM
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE-LFREM 426
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ G + N VTY TLI G+ D A ++ M G+ PN +T N L+ LC+NG L
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
++A + E L K P + T + ++ K + + L+ + ++ DV+ YN
Sbjct: 487 EKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+I+G C+ L A +M + G LPD+ T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 192/394 (48%), Gaps = 37/394 (9%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ GF PD+ T ++NG C +E A L ++L G PN+VTY TLI+ C
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA-LFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++ A+ L++ M G +PN VT N LV LCE G +A +L +++ + P+++T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITF 261
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T +D + K + ++A L+N M Q S+ DV Y LINGLC L++ A M +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
G P+ Y LI K + + I MS+ G+V + I+Y V+I+G C
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC------- 374
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+V +P V ++V N + +R P++ TYN L+
Sbjct: 375 ------------LVGRPDV----------AQEVFNQMSSRR------APPDIRTYNVLLD 406
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+G + +A + E M + + ++VTY ++I C L + A L + KG +P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
++I+YT ++ C RG EA+ + K+ + G +
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 201/447 (44%), Gaps = 40/447 (8%)
Query: 148 VRLLCLEGKL---EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
RLL + K+ + I L M G P + T N +++ +C +A +L + M+
Sbjct: 87 TRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGK-MM 145
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G P+LVT+ +L+ GYC N ++ A+ L+ + G +PN VT L+ LC
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC------ 199
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
KNR A L+N+M N +VV YN L
Sbjct: 200 ------------------------------KNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
+ GLC+ A +M+K+ + P+ T+ LI A K GK EA + VM +M +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
PD +Y +I GLC + A+++ + M N P +++ +I + + K V + +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
M + GV N TY LI + G A + +M ++ PD+ TYN+L+ C
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 505 NLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
+ AL + M ++ ++++YT +++ C G ++A + + + G+ + +
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 565 PVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ + +C+ +A +LF+ E
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 2/238 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GKL A L +M+Q PDVFT+ ++NGLC GL+++A + M G PN V
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ-MFYLMERNGCYPNEVI 330
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y TLI G+C V+ + ++ M+ G+ N +T +L+ C G A+++ + +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ-M 389
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ + PD+ T V +D N + +A ++ MR+ M++++V Y ++I G+CK +
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
A+ C + KG+ P+ TY +I + G EA + M + G +P+E YK
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 37/353 (10%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ +R LC L A+ L M G P+V T+N +V GLC++G A WL+R+M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA-AWLLRDM 249
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
++ PN++T+ LI + V + +A LY+ M + P+ T L++ LC G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA++M ++ + P+ V T + + K++ ++ EM Q + + + Y V
Sbjct: 310 DEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI G C ++A +M + PD TYN+L+ L GK +A I M K
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
+ + ++Y ++I+G+C + A ++L L+ +
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDA------------------FDLFCSLFSK-------- 462
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
G+ PNV TY +I + G I+ A SL ++M G P+ Y
Sbjct: 463 ---------GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 3/291 (1%)
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
N +F A L+ M + ++ + L++ + K ++ +M G+ P T
Sbjct: 61 NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
NI++ + + A LG M K+G PD +++ ++ G C I A L +L
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
P + + +I + + +++A+ + M G PNV TYNAL+ + G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
A L +M+ + + P+V+T+ LI A + A +L M+Q PD+ +Y L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK---LEEPVKAF 583
C+ G EA + + + ++G + V L + +CK +E+ +K F
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 330 KNQLMNLAYGYACEMLKKGV----LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
+N L NL + A ++ + V LP + L+ + K + + M +GI
Sbjct: 56 RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
P + +++ +C RA L M+ P + + +++ Y + +AI
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
D +L G PNV TY LI K+ ++ A L +M T G P+VVTYN L+ C
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
+ A L R+M+++ P++I++T L+ G EA+E Y +++ + D
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 566 VQILFN---MYCKLEEPVKAFNLFQ 587
L N MY L+E + F L +
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLME 320
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 91/204 (44%)
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
SY+ ++R + A +L M+++ +P I + ++ + + I + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
G+ P + T N ++ S RA +M+ G PD+VT+ L+ C+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
+ A+ L +++ G +P++++YT L+R C + A E + ++ +G + V L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 570 FNMYCKLEEPVKAFNLFQDWLESK 593
C++ A L +D ++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRR 253
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 2/429 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L AI ++ +MV KG T+N ++ G CK G + A + L++EML G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA-ERLLKEMLSIGFNVNQGS 437
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+ ++I C+ D AL M + P L+ LC++G +A ++ + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
N + D TS + + + +AF + E+ +D V+YN LI+G C + +
Sbjct: 498 NKGF-VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A+ + EM+K+G+ PD +TY+ILI L+ K EA + G++PD +Y VM
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I G C +E M++ + P +V+N +I Y R +S A+ R+ M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PN TY +LI + A L EEM +GL P+V Y LI L
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
L REM K P+ I+YT ++ GN EA ++ + G++ D + + Y
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 575 KLEEPVKAF 583
K ++AF
Sbjct: 797 KQGGVLEAF 805
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 204/437 (46%), Gaps = 8/437 (1%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+ + A + MV++G P + T++ +V GL + + A+ ++++EM + G PN++
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY-FVLKEMTKKGFPPNVIV 367
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN LI + S++KA+ + M G+ T N L+ C+NG A+++L+E+L
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 275 NDDKDIPDLVTSTV---FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ ++ ++V H F A EM +M LI+GLCK+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLM----FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A + L KG + D T N L+ L + GK EA I + G V D +SY
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I G C + + A L M+ + P ++++I V AI D +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P+V+TY+ +I K+ +EM++K + P+ V YN LI A C
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
AL+LR +M KG P+ +YT L++ I +EA+ + ++ GL + L +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 572 MYCKLEEPVKAFNLFQD 588
Y KL + VK L ++
Sbjct: 724 GYGKLGQMVKVECLLRE 740
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 165/358 (46%), Gaps = 6/358 (1%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-WLVREM 203
+ + LLC ++A+R M+ + P +++GLCK G KA + W +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF--QF 496
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L G + + T N L+ G C +D+A + + G +RV+ N L+ C L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA L+E++ PD T ++ + F + +A W++ ++N M DV Y+V
Sbjct: 557 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
+I+G CK + + EM+ K V P+ YN LI A + G+ A + M G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD-VSNA 442
I P+ +Y +I+G+ + AK L M + P + +ID YG+ V
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
L R++ K VHPN TY +I + + GN+ A L EM KG+ PD +TY I
Sbjct: 736 CLLREMHSK-NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 2/333 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC GK A+ L + KGF+ D T N +++GLC+ G +++A + +E+L G +
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF-RIQKEILGRGCVM 538
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ V+YNTLI G C +D+A M G++P+ T +IL+ L ++EA +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ + +PD+ T +V +D K + ++EM +++ + V YN LI C+
Sbjct: 599 DDCKRNGM-LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ +++A +M KG+ P++ TY LI + + EA + M G+ P+
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +I G +V+ + LL M + + P I + ++I Y R +V+ A + M
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+ G+ P+ TY I ++K G + A+ +E
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 198/438 (45%), Gaps = 17/438 (3%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK---AHDWLVREMLEFGPLPNLVTYN 216
A+ + ++ KG P T N ++ L + +K A D + + G P++ +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-----GVSPDVYLFT 264
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
T I +C V++A+ L+S M + G+ PN VT N ++ L G EA E+++
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ P L+T ++ + + + A+ + EM + +V+ YN LI+ + +N
Sbjct: 325 GME-PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A M+ KG+ + TYN LI K G+ A +L M +G ++ S+ +I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 397 GLC----FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
LC FD + E+L L N+ ++ LI L K S A+ L
Sbjct: 444 LLCSHLMFDSALRFVGEML---LRNMSPGGGLLTTLISGLCKHGKH-SKALELWFQFLNK 499
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G + T NAL+ ++G + A+ +++E+L +G D V+YN LI C + D A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
EMV++G +PD +Y+ L+ +EA + + ++G++ D ++ +
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 573 YCKLEEPVKAFNLFQDWL 590
CK E + F + +
Sbjct: 620 CCKAERTEEGQEFFDEMM 637
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 134 GYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
G C + + C + KL+ A MV++G PD +T++ ++ GL + +E
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
+A + + G LP++ TY+ +I G C ++ + M +QPN V N L
Sbjct: 593 EAIQFW-DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
+ A C +G L A ++ E++ K I P+ T T + +A L+ EMR
Sbjct: 652 IRAYCRSGRLSMALELREDM--KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+E +V Y LI+G K M EM K V P+ TY ++IG ++G EA
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 373 CYILGVMSKMGIVPDEISYKVMIRG 397
+L M + GIVPD I+YK I G
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYG 794
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 5/379 (1%)
Query: 216 NTLIKGYCTVNSVDK---ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
+ LI+ YCT D AL ++ +A+ G+ P++ TCNIL+ +L ++ + +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ PD+ T ++ + K + +A L+++M + + +VV +N +I+GL
Sbjct: 252 VCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ A+ + +M+++G+ P TY+IL+ L + + +A ++L M+K G P+ I Y
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I + +A E+ M++ + +N +I Y + NA ML
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G + N ++ ++I A EML + + P LI C H A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L+L + + KG D + L+ C G EA +IL G + D V L +
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 573 YCKLEEPVKAFNLFQDWLE 591
C ++ +AF + ++
Sbjct: 550 CCGKKKLDEAFMFLDEMVK 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R C G+L A+ L+ M KG P+ T+ ++ G+ + +E+A L EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK-LLFEEMRMEG 710
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
PN+ Y LI GY + + K L M + PN++T +++ +G++ EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
++L E + + +PD +T F+ Y K ++AF +E
Sbjct: 771 RLLNE-MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 2/429 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L AI ++ +MV KG T+N ++ G CK G + A + L++EML G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA-ERLLKEMLSIGFNVNQGS 437
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+ ++I C+ D AL M + P L+ LC++G +A ++ + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
N + D TS + + + +AF + E+ +D V+YN LI+G C + +
Sbjct: 498 NKGF-VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A+ + EM+K+G+ PD +TY+ILI L+ K EA + G++PD +Y VM
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I G C +E M++ + P +V+N +I Y R +S A+ R+ M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PN TY +LI + A L EEM +GL P+V Y LI L
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
L REM K P+ I+YT ++ GN EA ++ + G++ D + + Y
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 575 KLEEPVKAF 583
K ++AF
Sbjct: 797 KQGGVLEAF 805
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 204/437 (46%), Gaps = 8/437 (1%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+ + A + MV++G P + T++ +V GL + + A+ ++++EM + G PN++
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY-FVLKEMTKKGFPPNVIV 367
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN LI + S++KA+ + M G+ T N L+ C+NG A+++L+E+L
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 275 NDDKDIPDLVTSTV---FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ ++ ++V H F A EM +M LI+GLCK+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLM----FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A + L KG + D T N L+ L + GK EA I + G V D +SY
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I G C + + A L M+ + P ++++I V AI D +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P+V+TY+ +I K+ +EM++K + P+ V YN LI A C
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
AL+LR +M KG P+ +YT L++ I +EA+ + ++ GL + L +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 572 MYCKLEEPVKAFNLFQD 588
Y KL + VK L ++
Sbjct: 724 GYGKLGQMVKVECLLRE 740
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 165/358 (46%), Gaps = 6/358 (1%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-WLVREM 203
+ + LLC ++A+R M+ + P +++GLCK G KA + W +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF--QF 496
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L G + + T N L+ G C +D+A + + G +RV+ N L+ C L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA L+E++ PD T ++ + F + +A W++ ++N M DV Y+V
Sbjct: 557 DEAFMFLDEMVKRGLK-PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
+I+G CK + + EM+ K V P+ YN LI A + G+ A + M G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD-VSNA 442
I P+ +Y +I+G+ + AK L M + P + +ID YG+ V
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
L R++ K VHPN TY +I + + GN+ A L EM KG+ PD +TY I
Sbjct: 736 CLLREMHSK-NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 2/333 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC GK A+ L + KGF+ D T N +++GLC+ G +++A + +E+L G +
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF-RIQKEILGRGCVM 538
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ V+YNTLI G C +D+A M G++P+ T +IL+ L ++EA +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ + +PD+ T +V +D K + ++EM +++ + V YN LI C+
Sbjct: 599 DDCKRNGM-LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ +++A +M KG+ P++ TY LI + + EA + M G+ P+
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +I G +V+ + LL M + + P I + ++I Y R +V+ A + M
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+ G+ P+ TY I ++K G + A+ +E
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 198/438 (45%), Gaps = 17/438 (3%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK---AHDWLVREMLEFGPLPNLVTYN 216
A+ + ++ KG P T N ++ L + +K A D + + G P++ +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-----GVSPDVYLFT 264
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
T I +C V++A+ L+S M + G+ PN VT N ++ L G EA E+++
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ P L+T ++ + + + A+ + EM + +V+ YN LI+ + +N
Sbjct: 325 GME-PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A M+ KG+ + TYN LI K G+ A +L M +G ++ S+ +I
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 397 GLC----FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
LC FD + E+L L N+ ++ LI L K S A+ L
Sbjct: 444 LLCSHLMFDSALRFVGEML---LRNMSPGGGLLTTLISGLCKHGKH-SKALELWFQFLNK 499
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G + T NAL+ ++G + A+ +++E+L +G D V+YN LI C + D A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
EMV++G +PD +Y+ L+ +EA + + ++G++ D ++ +
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 573 YCKLEEPVKAFNLFQDWL 590
CK E + F + +
Sbjct: 620 CCKAERTEEGQEFFDEMM 637
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 134 GYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
G C + + C + KL+ A MV++G PD +T++ ++ GL + +E
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
+A + + G LP++ TY+ +I G C ++ + M +QPN V N L
Sbjct: 593 EAIQFW-DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
+ A C +G L A ++ E++ K I P+ T T + +A L+ EMR
Sbjct: 652 IRAYCRSGRLSMALELREDM--KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+E +V Y LI+G K M EM K V P+ TY ++IG ++G EA
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 373 CYILGVMSKMGIVPDEISYKVMIRG 397
+L M + GIVPD I+YK I G
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYG 794
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 5/379 (1%)
Query: 216 NTLIKGYCTVNSVDK---ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
+ LI+ YCT D AL ++ +A+ G+ P++ TCNIL+ +L ++ + +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ PD+ T ++ + K + +A L+++M + + +VV +N +I+GL
Sbjct: 252 VCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ A+ + +M+++G+ P TY+IL+ L + + +A ++L M+K G P+ I Y
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I + +A E+ M++ + +N +I Y + NA ML
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G + N ++ ++I A EML + + P LI C H A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L+L + + KG D + L+ C G EA +IL G + D V L +
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 573 YCKLEEPVKAFNLFQDWLE 591
C ++ +AF + ++
Sbjct: 550 CCGKKKLDEAFMFLDEMVK 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R C G+L A+ L+ M KG P+ T+ ++ G+ + +E+A L EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK-LLFEEMRMEG 710
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
PN+ Y LI GY + + K L M + PN++T +++ +G++ EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
++L E + + +PD +T F+ Y K ++AF +E
Sbjct: 771 RLLNE-MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 232/508 (45%), Gaps = 42/508 (8%)
Query: 119 KMMRENISLVKIGLRGYACEYSYTEHAAT----VRLLCLEGKLEAAIRLQRIMVQKGFLP 174
+++ N ++ + Y YT H ++ V +C G+++ A + M + G P
Sbjct: 30 QLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEP 89
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLE----FGPLPNLVTYNTLIKGYCTVNSVDK 230
DV ++N +++G C+ G + A LV E L F P++V++N+L G+ + +D+
Sbjct: 90 DVISYNSLIDGHCRNGDIRSAS--LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
+++Y + PN VT + + C++G L+ A K + D P++VT T +
Sbjct: 148 -VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALS-PNVVTFTCLI 205
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
D Y K + A SL+ EMR+ M ++VV Y LI+G CK M A M++ V
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P++ Y +I ++ G + A L M G+ D +Y V+I GLC + + A E+
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+ M + +VP +++ +++ Y + + A+ +++ G P+V + +I K
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 471 SGNIYRA-------------YSLKEEMLTK-----------------GLFPDVVTYNLLI 500
+G ++ A Y++ + L K GL PD Y I
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 501 GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
C + A +L+ MVQ+G DL++YT L+ +G EA + + ++L SG+
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 561 NDHVPVQILFNMYCKLEEPVKAFNLFQD 588
D +L Y K A +L D
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 175/344 (50%), Gaps = 11/344 (3%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G LE A+ L + M + +V T+ +++G CK G M++A + R M+E PN
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSR-MVEDRVEPN 267
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ Y T+I G+ D A+ + M + G++ + +++ LC NG LKEA +++E
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ D +PD+V T M+ YFK+ A ++++++ + E DVVA + +I+G+ KN
Sbjct: 328 DMEKSDL-VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
++ A Y C V+ Y +LI AL KEG E + +S+ G+VPD+ Y
Sbjct: 387 GQLHEAIVYFCIEKANDVM-----YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLM 449
I GLC ++V A +L M+ ++ + + +I YG + A D M
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI--YGLASKGLMVEARQVFDEM 499
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
L G+ P+ ++ LI A+ K GN+ A L +M +GL V
Sbjct: 500 LNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 19/394 (4%)
Query: 174 PDVFTHNHIVNGLCKVGLME---KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
P+V T++ ++ CK G ++ K+ + R+ L PN+VT+ LI GYC ++
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALS----PNVVTFTCLIDGYCKAGDLEV 216
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A+ LY M + N VT L+ C+ G ++ A++M ++ D + LV +T+ +
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI-I 275
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
D +F+ + A +M M +D+ AY V+I+GLC N + A +M K ++
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
PD + ++ A +K G+ + A + + + G PD ++ MI G+ + + A +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-V 394
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF---GVHPNVFTYNALILA 467
+C+ +++ ++ID CK+ + I L K G+ P+ F Y + I
Sbjct: 395 YFCIEK----ANDVMYTVLID--ALCKE-GDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
K GN+ A+ LK M+ +GL D++ Y LI + A Q+ EM+ G PD
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
+ L+R GN A + + + GL+
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 168/414 (40%), Gaps = 69/414 (16%)
Query: 199 LVREMLEF-------GPLPNLVTYN----TLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
+VRE L+F LP+ T N LI C + S+ YL S G P+R
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR----GYTPHR 56
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
+ N +V +C+ G +K A+ D+V S
Sbjct: 57 SSFNSVVSFVCKLGQVKFAE--------------DIVHS--------------------- 81
Query: 308 EMRQNSMEVDVVAYNVLINGLCKN----------QLMNLAYGYACEMLKKGVLPDAFTYN 357
M + E DV++YN LI+G C+N + + ++G+ C+ PD ++N
Sbjct: 82 -MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICK-------PDIVSFN 133
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
L K E +GVM K P+ ++Y I C ++ A + M +
Sbjct: 134 SLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA 477
+ P + + +ID Y + D+ A+ M + + NV TY ALI K G + RA
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 478 YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+ M+ + P+ + Y +I D A++ +M+ +G R D+ +Y ++
Sbjct: 253 EEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
C G KEA E + KS L+ D V + N Y K A N++ +E
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 142 TEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR 201
T + + LC GKL+ A + M + +PD+ ++N K G M+ A + +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN-MYH 362
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+++E G P++V +T+I G + +A+ + + N V +L+ ALC+ G
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEG 417
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
E +++ +I ++ +PD T ++ K + AF L M Q + +D++AY
Sbjct: 418 DFIEVERLFSKI-SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
LI GL LM A EML G+ PD+ +++LI A KEG A +L M +
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Query: 382 MGIV 385
G+V
Sbjct: 537 RGLV 540
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%)
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A + + K LPD FT N I L + L + G P S+ ++
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 397 GLC------FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
+C F DIV + C P I +N +ID + R D+ +A L + +
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCE------PDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 451 K---FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
F P++ ++N+L K + + ML K P+VVTY+ I C
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSG 177
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
AL+ M + P+++++T L+ C G+ + A Y ++ + + + V
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 568 ILFNMYCKLEEPVKAFNLFQDWLESK 593
L + +CK E +A ++ +E +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDR 263
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 208/467 (44%), Gaps = 62/467 (13%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R LC ++AA L M +KG P+ FT +V G CK GL +K + L+ M FG
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE-LLNAMESFG 212
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
LPN V YNT++ +C D + + M + G+ P+ VT N + ALC+ G + +A
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 268 KMLEEILNDDK---DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
++ ++ D+ P+ +T + + + K A +L+ +R+N + +YN+
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
+ GL ++ A +M KG+ P ++YNIL+ L K G +A I+G+M + G+
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
PD ++Y ++ G C + AK LL M+ N N +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN-----------------------NCL- 428
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
PN +T N L+ + K G I A L +M KG D VT N+++ C
Sbjct: 429 -----------PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 505 NLRSHDFALQLRREMVQKGHR-----------------------PDLISYTELVRESCIR 541
D A+++ + M G PDLI+Y+ L+ C
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G EA+ +A+++ L D V I + +CK + AF + +D
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 5/382 (1%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P++ YN L++ V+ +LY M GI P T N+L+ ALC++ + A+++
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+E + + P+ T + + Y K + L N M + + V YN +++ C
Sbjct: 170 FDE-MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM---SKMGIV- 385
+ + + +M ++G++PD T+N I AL KEGK +A I M +G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
P+ I+Y +M++G C + AK L + N + +N+ + R A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
M G+ P++++YN L+ K G + A ++ M G+ PD VTY L+ C+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
+ D A L +EM++ P+ + L+ G EAEE K+ + G D V
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 566 VQILFNMYCKLEEPVKAFNLFQ 587
I+ + C E KA + +
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVK 490
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 59/354 (16%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM----------- 203
G++ A L R M +KG+ D T N IV+GLC G ++KA + +V+ M
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE-IVKGMRVHGSAALGNL 503
Query: 204 ------------LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+E LP+L+TY+TL+ G C +A L++ M +QP+ V N
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
I +H C+ G + A ++L+++ +++ + KN+ F + L +EM++
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF-EIHGLMDEMKE 622
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK------ 365
+ ++ YN I LC+ + + A EM++K + P+ F++ LI A K
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 366 ----------------------------EGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
G+ +A +L + G YK ++
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
LC ++ A +L M++ P +ID G+ + A D M++
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 4/314 (1%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P + + ++ K R L+ +M + +N+LI LC + ++ A
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
EM +KG P+ FT+ IL+ K G T + +L M G++P+++ Y ++ C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY---GRCKDVSNAILTRDLMLKFGV-HP 456
+ +++++ M +VP + +N I G+ D S +L G+ P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
N TYN ++ K G + A +L E + + +YN+ + A +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
++M KG P + SY L+ C G +A+ + ++G+ D V L + YC +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 577 EEPVKAFNLFQDWL 590
+ A +L Q+ +
Sbjct: 410 GKVDAAKSLLQEMM 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 35/302 (11%)
Query: 125 ISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVN 184
I LV L C ++ + LC G+ A L M+ + PD +N ++
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 185 GLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ 244
CK G + A L ++M + G +L TYN+LI G N + + L M + GI
Sbjct: 568 HFCKQGKISSAFRVL-KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDK---------------DIPDLVTS--- 286
PN T N + LCE +++A +L+E++ + +PD +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 287 ---------------TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ + + ++A L + E+ Y L+ LCK
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ +A G +M+ +G D +I L K G +EA M +M V E++
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASV-GEVAN 805
Query: 392 KV 393
KV
Sbjct: 806 KV 807
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 198/423 (46%), Gaps = 41/423 (9%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
YS+T + C +L A+ M++ GF P + T +VNG C V +A
Sbjct: 115 YSFT---TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS- 170
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
LV +++ G PN+V YNT+I C V+ AL + M GI+P+ VT N L+ L
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+G + ++L +++ PD++T + +D Y K + ++A +NEM Q S+ ++
Sbjct: 231 HSGTWGVSARILSDMMRMGIS-PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V YN LINGLC + L++ A ++ KG P+A TYN LI K + + IL V
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
MS+ G+ D +Y + +G C A+++L GR
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL----------------------GR--- 384
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
M+ GVHP+++T+N L+ G I +A E++ ++TYN+
Sbjct: 385 ----------MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK-S 557
+I C + A L + KG PD+I+Y ++ + +EA E Y K+ K
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Query: 558 GLM 560
GLM
Sbjct: 495 GLM 497
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 186/408 (45%), Gaps = 39/408 (9%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K EA I L R + G D+++ +++ C+ + A L +M++ G P++VT+
Sbjct: 94 KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL-GKMMKLGFEPSIVTF 152
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+L+ G+C VN +A+ L + G +PN V N ++ +LCE G +
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN----------- 201
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
A + M++ + DVV YN LI L +
Sbjct: 202 -------------------------TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
++ +M++ G+ PD T++ LI KEG+ EA M + + P+ ++Y +I
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
GLC + AK++L +++ P + +N +I+ Y + K V + + +M + GV
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ FTYN L + ++G A + M++ G+ PD+ T+N+L+ C+ AL +
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-V 415
Query: 516 RREMVQKGHR-PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
R E +QK +I+Y +++ C ++A + + G+ D
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPD 463
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 170/392 (43%), Gaps = 36/392 (9%)
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+M E PLP++V ++ L+ +N + + L+ + GI + + L+ C
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
L A L +++ + P +VT ++ + F +A SL +++ E +VV Y
Sbjct: 129 RLSLALSCLGKMMKLGFE-PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N +I+ LC+ +N A M K G+ PD TYN LI L+ G + IL M +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
MGI PD I++ +I D+YG+ +
Sbjct: 248 MGISPDVITFSALI-----------------------------------DVYGKEGQLLE 272
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A + M++ V+PN+ TYN+LI G + A + +++KG FP+ VTYN LI
Sbjct: 273 AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
C + D +++ M + G D +Y L + C G AE+ +++ G+
Sbjct: 333 GYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 562 DHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
D IL + C + KA +D +SK
Sbjct: 393 DMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 168/367 (45%), Gaps = 42/367 (11%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
E S + V C + A+ L +V G+ P+V +N I++ LC+ G + A D
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L + M + G P++VTYN+LI + + + S M GI P+ +T + L+
Sbjct: 206 VL-KHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
+ G L EAKK +NEM Q S+ +
Sbjct: 265 GKEGQLLEAKKQ------------------------------------YNEMIQRSVNPN 288
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+V YN LINGLC + L++ A ++ KG P+A TYN LI K + + IL
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
VMS+ G+ D +Y + +G C A+++L M++ + P +N+++D G C
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD--GLCD 406
Query: 438 --DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
+ A++ + + K + TYN +I K+ + A+ L + KG+ PDV+T
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 496 Y-NLLIG 501
Y ++IG
Sbjct: 467 YITMMIG 473
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
EG+L A + M+Q+ P++ T+N ++NGLC GL+++A L ++ G PN V
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL-NVLVSKGFFPNAV 325
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TYNTLI GYC VD + + M+ G+ + T N L C+ G A+K+L +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ PD+ T + +D + + +A +++++ V ++ YN++I GLCK
Sbjct: 386 VSCGVH-PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM-GIVP 386
+ A+ C + KGV PD TY ++ L ++ REA + M K G++P
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 3/255 (1%)
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
N A C+M + LP ++ L+ A+ K K + + +GI D S+ +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I C + A L M+ P + + +++ + A+ D ++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PNV YN +I + + G + A + + M G+ PDVVTYN LI + + + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ +M++ G PD+I+++ L+ G EA+++Y ++++ + + V L N C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 575 ---KLEEPVKAFNLF 586
L+E K N+
Sbjct: 301 IHGLLDEAKKVLNVL 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR--EMLEFGPL 209
C GK AA ++ MV G PD++T N +++GLC G + KA LVR ++ + +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA---LVRLEDLQKSKTV 426
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
++TYN +IKG C + V+ A YL+ S+A G+ P+ +T ++ L +EA ++
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 270 LEEILNDDKDIP 281
++ +D +P
Sbjct: 487 YRKMQKEDGLMP 498
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 222/512 (43%), Gaps = 72/512 (14%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C G+++ A L ++M Q+G PD+ ++ +++G K G++ H L + L G
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK-LFSQALHKGVKL 354
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V +++ I Y + A +Y M GI PN VT IL+ LC++G + EA M
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+IL + P +VT + +D + K F+L+ +M + DVV Y VL++GL K
Sbjct: 415 GQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 331 NQLMNLAYGYACEMLKK-----------------------------------GVLPDAFT 355
LM A ++ +ML + G+ PD T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
+ ++ EG+ EA ++ M KMG+ PD ++Y +I C +L M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI---------- 465
N + V N++I L +C + +A + +++ + P++ TYN +I
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 466 -----------------------LAHV--KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
L HV K+ ++ A + M KG P+ VTY L+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 501 GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
+ + +L EM +KG P ++SY+ ++ C RG EA + + + + L+
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 561 NDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
D V IL YCK+ V+A L++ L +
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 210/441 (47%), Gaps = 12/441 (2%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC---KVGLMEKAHDWLVREMLEFGP 208
C G ++ A+ + Q G + + ++N L +V L+ D L R +E
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIE--- 213
Query: 209 LPNLVTYNTLIKG--YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
P+ V+ + + +C V KAL + + + G + V+CN ++ L + ++ A
Sbjct: 214 -PSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVA 270
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L +L D P++VT ++ + K E +AF L+ M Q +E D++AY+ LI+
Sbjct: 271 SRLLSLVL-DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G K ++ + + + L KGV D ++ I K G A + M GI P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
+ ++Y ++I+GLC D I A + +L M P + ++ +ID + +C ++ +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ M+K G P+V Y L+ K G + A +ML + + +VV +N LI C L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
D AL++ R M G +PD+ ++T ++R S + G +EA + ++ K GL D +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 567 QILFNMYCKLEEPVKAFNLFQ 587
L + +CK +P LF
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFD 590
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 198/454 (43%), Gaps = 35/454 (7%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
++T+ + G L A + + M+ +G P+V T+ ++ GLC+ G + +A + ++L
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG-MYGQIL 418
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G P++VTY++LI G+C ++ LY M G P+ V +LV L + G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 265 EAKKMLEEILNDDKDI----------------------------------PDLVTSTVFM 290
A + ++L + PD+ T T M
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+A L+ M + +E D +AY LI+ CK+ + M + +
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
D N++I L+K + +A + + + PD ++Y MI G C R + A+ +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+ P + ++I + + D+ AI +M + G PN TY L+ K
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
S +I ++ L EEM KG+ P +V+Y+++I C D A + + + PD+++
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
Y L+R C G EA Y +L++G+ D +
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 154/350 (44%), Gaps = 13/350 (3%)
Query: 126 SLVKIGLRGYACEYSYTEHAATVRL-----------LCLEGKLEAAIRLQRIMVQKGFLP 174
L K GL +A +S ++RL C + + A+++ R+M G P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
DV T ++ G +E+A +L M + G P+ + Y TLI +C L L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEAL-FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ M I + CN+++H L + +++A K ++ + K PD+VT + Y
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYC 647
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
R +A ++ ++ + V +LI+ LCKN M+ A M +KG P+A
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
TY L+ K + + M + GI P +SY ++I GLC + A +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
++ ++P + + ++I Y + + A L + ML+ GV P+ AL
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 164/365 (44%), Gaps = 20/365 (5%)
Query: 241 TGIQPNRVTCNILVHALCENGHLKEAKKMLEE-ILNDDKDIP----------DLVTSTVF 289
+G P+ T + H L NG A K+ +E I N KD D
Sbjct: 96 SGKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFL 152
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
M+ + +A ++ Q + + + ++N L + ++L + ++ + G+
Sbjct: 153 MECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGI 212
Query: 350 LPDAFT-YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
P + + ++ AL+ +G+ +A ++ + G +S +++GL D+ I A
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVAS 271
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
LL +L+ P + + +I+ + + ++ A +M + G+ P++ Y+ LI +
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ--LRREMVQKGHRP 526
K+G + + L + L KG+ DVV ++ I ++S D A + + M+ +G P
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY--VKSGDLATASVVYKRMLCQGISP 389
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
++++YT L++ C G EA Y +ILK G+ V L + +CK F L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 587 QDWLE 591
+D ++
Sbjct: 450 EDMIK 454
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 176/385 (45%), Gaps = 22/385 (5%)
Query: 142 TEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR 201
+ ++ + LC K+E A L M + G + DV+T+ +V+ CK GL+E+A W
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF-N 542
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
EM E G PN+VTY LI Y V A L+ +M G PN VT + L+ C+ G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
+++A ++ E + KD+PD+ D YFK + NS +VV Y
Sbjct: 603 QVEKACQIFERMCGS-KDVPDV-------DMYFKQYD------------DNSERPNVVTY 642
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
L++G CK+ + A M +G P+ Y+ LI L K GK EA + MS+
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
G +Y +I + A ++L ML N P +++ +ID +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A +M + G PNV TY A+I G I L E M +KG+ P+ VTY +LI
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 502 AACNLRSHDFALQLRREMVQKGHRP 526
C + D A L EM Q H P
Sbjct: 823 HCCKNGALDVAHNLLEEMKQT-HWP 846
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 196/423 (46%), Gaps = 22/423 (5%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
+R C + + A + K+ A L M+ +G LP++ T++ +++G CK G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 192 MEKA---------------HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
+EKA D ++ + PN+VTY L+ G+C + V++A L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP-DLVTSTVFMDHYFK 295
+M+ G +PN++ + L+ LC+ G L EA+++ E+ + P L T + +D YFK
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTYSSLIDRYFK 721
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ A + ++M +NS +VV Y +I+GLCK + AY M +KG P+ T
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
Y +I GK +L M G+ P+ ++Y+V+I C + + A LL M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
+ +I+ G K+ ++ D + + P + Y LI +K+ +
Sbjct: 842 QTHWPTHTAGYRKVIE--GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Query: 476 RAYSLKEEMLT--KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
A L EE+ T L TYN LI + C + A QL EM +KG P++ S+
Sbjct: 900 MALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCS 959
Query: 534 LVR 536
L++
Sbjct: 960 LIK 962
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 208/470 (44%), Gaps = 30/470 (6%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK---------VGLMEKAHDW 198
V C G A +L + MV+ G +P +N ++ +C + L EKA+
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS- 437
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
EML G + N + ++ + C+ +KA + M G P+ T + +++ LC
Sbjct: 438 ---EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
++ A + EE + + D+ T T+ +D + K QA +NEMR+ +V
Sbjct: 495 NASKMELAFLLFEE-MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V Y LI+ K + ++ A ML +G LP+ TY+ LI K G+ +AC I
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 379 MSKMGIVPDE----------------ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
M VPD ++Y ++ G C + A++LL M P
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
IV++ +ID + + A + M + G ++TY++LI + K A +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
+ML P+VV Y +I C + D A +L + M +KG +P++++YT ++ + G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ E ++ G+ ++V ++L + CK A NL ++ ++
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 216/501 (43%), Gaps = 36/501 (7%)
Query: 115 LERLKMMRENISLVKIGLRGYACE-YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFL 173
L+ ++ +SL + + G+ ++Y+ LC GK A+ L + + F+
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYS--------LCKVGKWREALTL---VETENFV 299
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD + +++GLC+ L E+A D+L R M LPN+VTY+TL+ G + +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNR-MRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+ + M G P+ N LVHA C +G A K+L++++ +P V + +
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSI 417
Query: 294 FKNREFIQ------AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
+++ + A ++EM + ++ + + LC A+ EM+ +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G +PD TY+ ++ L K A + M + G+V D +Y +M+ C I +A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
++ M P + + +I Y + K VS A + ML G PN+ TY+ALI
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDV----------------VTYNLLIGAACNLRSHDF 511
H K+G + +A + E M PDV VTY L+ C +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A +L M +G P+ I Y L+ C G EA+E ++ + G L +
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 572 MYCKLEEPVKAFNLFQDWLES 592
Y K++ A + LE+
Sbjct: 718 RYFKVKRQDLASKVLSKMLEN 738
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 16/429 (3%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G +V H NG + L E + + +F P+ TYN LI+ + + +D
Sbjct: 200 GEFLNVLVRKHCRNGSFSIALEE------LGRLKDFRFRPSRSTYNCLIQAFLKADRLDS 253
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A ++ M+ ++ + T ++LC+ G +EA ++E + +PD V T +
Sbjct: 254 ASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----ENFVPDTVFYTKLI 309
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ F +A N MR S +VV Y+ L+ G + + M+ +G
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P +N L+ A G A +L M K G +P + Y ++I +C D+D + L
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 411 -LWCMLNNLMVPKPIVWNLI-IDLYGRC----KDVSNAILTRDLMLKFGVHPNVFTYNAL 464
L + M+ +V N I + + RC A M+ G P+ TY+ +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
+ + + A+ L EEM GL DV TY +++ + C + A + EM + G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
P++++YT L+ A E + +L G + + V L + +CK + KA
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 585 LFQDWLESK 593
+F+ SK
Sbjct: 610 IFERMCGSK 618
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ P+V + +++GLCKVG ++A+ L++ M E G PN+VTY +I G+ +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYK-LMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++ L L M G+ PN VT +L+ C+NG L A +LEE+ P
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM--KQTHWPTHTAG 851
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ F N+EFI++ L +E+ Q+ + Y +LI+ L K Q + +A E+
Sbjct: 852 YRKVIEGF-NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 347 -KGVLPD-AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
L D + TYN LI +L K A + M+K G++P+ S+ +I+GL + I
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 405 VRAKELL 411
A LL
Sbjct: 971 SEALLLL 977
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 6/316 (1%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
CE + + A + LC GKL+ A ++ M + GF ++T++ +++ KV + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
L + MLE PN+V Y +I G C V D+A L M + G QPN VT ++
Sbjct: 729 SKVLSK-MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
G ++ ++LE + P+ VT V +DH KN A +L EM+Q
Sbjct: 788 GFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
Y +I G K + +L G E+ + P Y +LI L K + A +
Sbjct: 847 THTAGYRKVIEGFNKEFIESL--GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 376 LGVMSKMG--IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
L ++ +V +Y +I LC + A +L M ++P+ + +I
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 434 GRCKDVSNAILTRDLM 449
R +S A+L D +
Sbjct: 965 FRNSKISEALLLLDFI 980
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 180/394 (45%), Gaps = 40/394 (10%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+ +LC EGKL+ A IM G P + T+N +V G G +E A ++ EM G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR-LIISEMKSKG 290
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P++ TYN ++ C + L M + G+ P+ V+ NIL+ NG L+ A
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+E++ +P T + F + A L E+R+ + +D V YN+LING
Sbjct: 348 AYRDEMVKQGM-VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA--------------- 372
C++ A+ EM+ G+ P FTY LI L ++ KTREA
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 373 -----------CYI---------LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
C I L M M I PD+++Y ++RGLC + A+EL+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M + P I +N +I Y + D +A + RD ML G +P + TYNAL+ K+
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
A L EM ++G+ P+ ++ +I A NL
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 8/390 (2%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWL-VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
+V+T N ++N LCK G ++KA +L + E+ FG P +VTYNTL++G+ ++ A
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEV--FGIKPTIVTYNTLVQGFSLRGRIEGARL 281
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+ S M G QP+ T N ++ +C G E + ++EI +PD V+ + +
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI----GLVPDSVSYNILIRGC 337
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
N + AF+ +EM + M YN LI+GL + A E+ +KG++ D+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
TYNILI + G ++A + M GI P + +Y +I LC A EL
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
++ M P ++ N ++D + ++ A M ++P+ TYN L+ G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
A L EM +G+ PD ++YN LI A +R EM+ G P L++Y
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLM-ND 562
L++ + AEE ++ G++ ND
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPND 607
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 182/392 (46%), Gaps = 12/392 (3%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M E G P T N ++ +N ++ A Y+ M I+ N T NI+++ LC+ G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
LK+AK L I+ P +VT + + A + +EM+ + D+ YN
Sbjct: 241 LKKAKGFLG-IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 323 VLINGLCKNQLMNLAYGYACEMLKK----GVLPDAFTYNILIGALWKEGKTREACYILGV 378
+++ +C G A E+L++ G++PD+ +YNILI G A
Sbjct: 300 PILSWMCNE-------GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M K G+VP +Y +I GL + I A+ L+ + +V + +N++I+ Y + D
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
A D M+ G+ P FTY +LI + A L E+++ KG+ PD+V N
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
L+ C + + D A L +EM PD ++Y L+R C G +EA E ++ + G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 559 LMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
+ DH+ L + Y K + AF + + L
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
I + +++R C R + A E + M PK N I+ L R + NA +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
M + + NV+T+N +I K G + +A M G+ P +VTYN L+ +LR
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV-QGFSLRG 274
Query: 509 H-DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ A + EM KG +PD+ +Y ++ C G E +I GL+ D V
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYN 331
Query: 568 ILF 570
IL
Sbjct: 332 ILI 334
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 198/418 (47%), Gaps = 39/418 (9%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ GF P + T ++NG C+ ++A LV M FG +PN+V YNT+I G C
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS-LVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++ AL ++ M GI+ + VT N L+ L +G +A ++L +++ D P+++
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID-PNVIFF 257
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T +D + K ++A +L+ EM ++
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEM-----------------------------------IR 282
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+ V+P+ FTYN LI G +A Y+ +M G PD ++Y +I G C + +
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+L M +V +N +I Y + ++ A + M+ GV P++ TYN L+
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+G I +A + E++ + D++TYN++I C A L R + +KG +P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLM-NDHVPVQILFNMYCKLE-EPVKA 582
D I+Y ++ C +G +EA++ ++ + G M ++ + + L + Y L E +KA
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKA 520
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 186/386 (48%), Gaps = 1/386 (0%)
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
EML+ P+P++V + ++ +N D +YLY M + GI + + IL+H C
Sbjct: 69 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 128
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
L A +L +++ P +VT ++ + + F +A SL + M +VV Y
Sbjct: 129 RLSLALALLGKMMKLGFR-PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N +INGLCKN+ +N A M KKG+ DA TYN LI L G+ +A +L M K
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
I P+ I + +I + +++ A+ L M+ +VP +N +I+ + + +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A DLM+ G P+V TYN LI KS + L EM +GL D TYN LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
C + A ++ MV G PD+++Y L+ C G ++A + KS +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 562 DHVPVQILFNMYCKLEEPVKAFNLFQ 587
D + I+ C+ ++ +A+ LF+
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFR 453
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 233/518 (44%), Gaps = 63/518 (12%)
Query: 114 SLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFL 173
+L+ L+ MR K+G+ A + +YT + + EG +E A+R+ MV G
Sbjct: 293 ALDLLREMRG-----KLGVP--ASQETYT---SVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
V +VNG CK + KA D R M E G P+ V ++ +++ +C ++KA+
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNR-MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD---IPDLVTSTVFM 290
Y M I P+ V LVH + + E+ + EI ND + + + +F+
Sbjct: 402 FYMRMKSVRIAPSSV----LVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL 457
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ K + A S M Q +E +VV YN ++ C+ + M+LA EML+KG+
Sbjct: 458 -LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ FTY+ILI +K + A ++ M+ +E+ Y +I GLC +AKE
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE- 575
Query: 411 LWCMLNNLMVPKP-----IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT----- 460
ML NL+ K +N IID + + D +A+ T M + G PNV T
Sbjct: 576 ---MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 461 ------------------------------YNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
Y ALI K ++ AY+L E+ GL
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
P+V YN LI NL D A+ L ++MV G DL +YT ++ GN A +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
Y+++L G++ D + +L N K + +KA + ++
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 177/388 (45%), Gaps = 36/388 (9%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
L C +GK++AA ++M QKG P+V +N+++ C++ M+ A + EMLE G
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS-IFSEMLEKGLE 516
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PN TY+ LI G+ A + + M + + N V N +++ LC+ G +AK+M
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L+ ++ + + + +D + K + A + EM +N +VV + LING C
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 330 KNQLMNL-----------------------------------AYGYACEMLKKGVLPDAF 354
K+ M+L AY E+ + G++P+
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
YN LI GK A + M GI D +Y MI GL D +I A +L +
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
L+ +VP I+ ++++ + A + M K V PNV Y+ +I H + GN+
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
A+ L +EML KG+ D +NLL+
Sbjct: 817 NEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 176/418 (42%), Gaps = 36/418 (8%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+N L+ Y +D A+ + M D + P N ++ +L + + EAK++ ++
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ D VT+ + M + R+ +A ++ + E D + +++ + CK
Sbjct: 231 VLIGV-AGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 334 MNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ +A EM K GV TY +I A KEG EA ++ M GI I+
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++ G C ++ +A +L M + P ++++++++ + + ++ AI M
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 453 GVHPNV----------------------------------FTYNALILAHVKSGNIYRAY 478
+ P+ F N + L K G + A
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
S + M KG+ P+VV YN ++ A C +++ D A + EM++KG P+ +Y+ L+
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 539 CIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRDS 596
+ + A + ++ S + V + N CK+ + KA + Q+ ++ KR S
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 1/290 (0%)
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+L + ++ E+ A+N L+N +N+ M+ A M+ + V+P N ++ +L
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ EA I M +G+ D ++ ++++R +R A ++ +++ P
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 424 IVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
++++L + + D+ A+ L R++ K GV + TY ++I+A VK GN+ A + +
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
EM+ G+ V+ L+ C AL L M ++G PD + ++ +V C
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
++A E Y ++ + V V + K E P A +F D ES
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES 444
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 217/483 (44%), Gaps = 43/483 (8%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C G+++ A L ++M Q+G PD+ ++ +++G K G++ H L + L G
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK-LFSQALHKGVKL 354
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V +++ I Y + A +Y M GI PN VT IL+ LC++G + EA M
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+IL + P +VT + +D + K F+L+ +M + DVV Y VL++GL K
Sbjct: 415 GQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
LM A ++ +ML + + + +N LI + + EA + +M GI PD +
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 391 YKVMIR------GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
+ ++R C +L M N + V N++I L +C + +A
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 445 TRDLMLKFGVHPNVFTYNALI---------------------------------LAHV-- 469
+ +++ + P++ TYN +I L HV
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K+ ++ A + M KG P+ VTY L+ + + +L EM +KG P ++
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
SY+ ++ C RG EA + + + + L+ D V IL YCK+ V+A L++
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 590 LES 592
L +
Sbjct: 774 LRN 776
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 12/392 (3%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC---KVGLMEKAHDWLVREMLEFGP 208
C G ++ A+ + Q G + + ++N L +V L+ D L R +E
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIE--- 213
Query: 209 LPNLVTYNTLIKG--YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
P+ V+ + + +C V KAL + + + G + V+CN ++ L + ++ A
Sbjct: 214 -PSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVA 270
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L +L D P++VT ++ + K E +AF L+ M Q +E D++AY+ LI+
Sbjct: 271 SRLLSLVL-DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G K ++ + + + L KGV D ++ I K G A + M GI P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
+ ++Y ++I+GLC D I A + +L M P + ++ +ID + +C ++ +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ M+K G P+V Y L+ K G + A +ML + + +VV +N LI C L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRES 538
D AL++ R M G +PD+ ++T ++R S
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 173/367 (47%), Gaps = 20/367 (5%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
E S +++ + C G L + L M++ G+ PDV + +V+GL K GLM A
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVT------CN 251
+ V+ ML N+V +N+LI G+C +N D+AL ++ M GI+P+ T +
Sbjct: 483 FSVK-MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 252 ILVHALCENGHLKEAKKM-LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
I+ A C+ H+K + L +++ +K D+ V + FK A +N +
Sbjct: 542 IMEDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL-PDAFTYNILIGALWKEGKT 369
+ ME D+V YN +I G C + ++ A E+LK P+ T ILI L K
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAE-RIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
A + +M++ G P+ ++Y ++ DI + +L M + P + +++I
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 430 IDLYGRCK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
ID G CK D + I + + K + P+V Y LI + K G + A L E ML
Sbjct: 719 ID--GLCKRGRVDEATNIFHQAIDAK--LLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Query: 486 TKGLFPD 492
G+ PD
Sbjct: 775 RNGVKPD 781
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 22/452 (4%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIV--NGLCKVGLMEKAHDWLVREM-LEF 206
LL LE + +A++ R G P +T H++ NG+ V +K D ++ +F
Sbjct: 76 LLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVA--DKVFDEMITNRGKDF 133
Query: 207 GPLPNLVTYNT-------LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
L ++ + L++ C VDKAL ++ G+ + + ++++L
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 260 NGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVV 319
+ + +++ + + +D F E +A + + V +V
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
+ N ++ GL +Q+ +A +L G P+ T+ LI K G+ A + VM
Sbjct: 254 SCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
+ GI PD I+Y +I G + +L L+ + +V++ ID+Y + D+
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ A + ML G+ PNV TY LI + G IY A+ + ++L +G+ P +VTY+ L
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 500 IGAAC---NLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
I C NLRS L +M++ G+ PD++ Y LV +G A K+L
Sbjct: 433 IDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 557 SGLMNDHVPVQILFNMYCKL---EEPVKAFNL 585
+ + V L + +C+L +E +K F L
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 193/385 (50%), Gaps = 2/385 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
L ++G L+ A R M + GF+ + +++N +++ L K +A + R +LE G P
Sbjct: 163 LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE-GFRP 221
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+L TY++L+ G +D + L M G++PN T I + L G + EA ++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ ++D+ PD+VT TV +D R+ A ++ +M+ + D V Y L++
Sbjct: 282 KR-MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
N+ ++ + EM K G +PD T+ IL+ AL K G EA L VM GI+P+ +
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +I GL + A EL M + + P + + ID YG+ D +A+ T + M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
G+ PN+ NA + + K+G A + + GL PD VTYN+++ + D
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 511 FALQLRREMVQKGHRPDLISYTELV 535
A++L EM++ G PD+I L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLI 545
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 193/428 (45%), Gaps = 41/428 (9%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
+++ + L + M G P+V+T + L + G + +A++ L R M + G P++VTY
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR-MDDEGCGPDVVTYT 297
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
LI CT +D A ++ M +P+RVT L+ +N L K+ E +
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE-MEK 356
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
D +PD+VT T+ +D K F +AF + MR + ++ YN LI GL + ++
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 337 AYGYACEMLKKGVLPDAFTYNILIG----------------------------------- 361
A M GV P A+TY + I
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR--DIVRAKELLWCMLNNLM 419
+L K G+ REA I + +G+VPD ++Y +M++ C+ + +I A +LL M+ N
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK--CYSKVGEIDEAIKLLSEMMENGC 534
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
P IV N +I+ + V A M + + P V TYN L+ K+G I A
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
L E M+ KG P+ +T+N L C AL++ +M+ G PD+ +Y ++
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 540 IRGNTKEA 547
G KEA
Sbjct: 655 KNGQVKEA 662
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 166/354 (46%), Gaps = 3/354 (0%)
Query: 148 VRLLCLEGKLEAAIRL-QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
+R C + A L ++ G P + T+N ++ GL + ++E A D + ++
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL-QVKST 814
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G +P++ TYN L+ Y +D+ LY M+ + N +T NI++ L + G++ +A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+ ++++D P T +D K+ +A L+ M + YN+LIN
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G K + A M+K+GV PD TY++L+ L G+ E + + + G+ P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNL-MVPKPIVWNLIIDLYGRCKDVSNAILT 445
D + Y ++I GL + A L M + + P +N +I G V A
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ + + G+ PNVFT+NALI + SG AY++ + M+T G P+ TY L
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 202/444 (45%), Gaps = 24/444 (5%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK++ AI L MVQKG P+ T N + + LCK + A L + M++ G +P++ T
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK-MMDMGCVPDVFT 645
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNT+I G V +A+ + M + P+ VT L+ + + +++A K++ L
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Query: 275 NDDKDIP------DLVTSTVF---MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
+ D P DL+ S + +D+ E + A + + +S+ V ++ Y+
Sbjct: 705 YNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD--GDSILVPIIRYS--- 759
Query: 326 NGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
CK+ ++ A + K GV P TYN+LIG L + A + + G
Sbjct: 760 ---CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI- 443
+PD +Y ++ I EL M + I N++I + +V +A+
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
L DLM P TY LI KSG +Y A L E ML G P+ YN+LI
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
D A L + MV++G RPDL +Y+ LV C+ G E + ++ +SGL D
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 564 VPVQILFNMYCK---LEEPVKAFN 584
V ++ N K LEE + FN
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFN 1020
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M + G +PDV T +V+ LCK G +A D L M + G LPNL TYNTLI G V+
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL-DVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVT 285
+D AL L+ +M G++P T + + ++G A + E++ K I P++V
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM--KTKGIAPNIVA 470
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ K +A ++ ++ + D V YN+++ K ++ A EM+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ G PD N LI L+K + EA + M +M + P ++Y ++ GL + I
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
A EL M+ P I +N + D + +V+ A+ M+ G P+VFTYN +I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
VK+G + A +M K ++PD VT
Sbjct: 651 FGLVKNGQVKEAMCFFHQM-KKLVYPDFVT 679
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 216/538 (40%), Gaps = 118/538 (21%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMV 168
N L L + ++E I L + G+ C + LC ++ A+++ M+
Sbjct: 577 NTLLAGLGKNGKIQEAIELFE-GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 169 QKGFLPDVFTHNHIVNG---------------------------LC-------KVGLMEK 194
G +PDVFT+N I+ G LC K L+E
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 195 AHD-----------------W--LVREMLEFGPLPNLVTYN-----------------TL 218
A+ W L+ +L + N V+++ +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 219 IKGYCTVNSVDKALYLYSSMA-DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
I+ C N+V A L+ D G+QP T N+L+ L E ++ A+ + ++
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV-KST 814
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK----NQL 333
IPD+ T +D Y K+ + + F L+ EM + E + + +N++I+GL K +
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 334 MNLAYGY---------ACE-----------------------MLKKGVLPDAFTYNILIG 361
++L Y AC ML G P+ YNILI
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF----DRDIVRAKELLWCMLNN 417
K G+ AC + M K G+ PD +Y V++ LC D + KEL LN
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN- 993
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNA-ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
P + +NLII+ G+ + A +L ++ G+ P+++TYN+LIL +G +
Sbjct: 994 ---PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A + E+ GL P+V T+N LI + A + + MV G P+ +Y +L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 161/379 (42%), Gaps = 1/379 (0%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY T+ K + +A Y M + G N + N L+H L ++ EA ++ +
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + P L T + M K R+ L EM ++ +V + + I L +
Sbjct: 215 ILEGFR-PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+N AY M +G PD TY +LI AL K A + M PD ++Y
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ +RD+ K+ M + VP + + +++D + + A T D+M G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ PN+ TYN LI ++ + A L M + G+ P TY + I AL
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+ +M KG P++++ + G +EA++ + + GL+ D V ++ Y
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 574 CKLEEPVKAFNLFQDWLES 592
K+ E +A L + +E+
Sbjct: 514 SKVGEIDEAIKLLSEMMEN 532
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 19/325 (5%)
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
EE+ K PD +S + N + N M + ++ VD
Sbjct: 86 EEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLE-ALRVD------------- 131
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+L +AY + M K+ + D TY + +L +G ++A Y L M + G V + S
Sbjct: 132 GKLEEMAYVFDL-MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +I L R A E+ M+ P ++ ++ G+ +D+ + + M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
G+ PNV+T+ I ++G I AY + + M +G PDVVTY +LI A C R D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A ++ +M H+PD ++Y L+ + ++ ++++ K G + D V IL
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 571 NMYCKLEEPVKAFNLFQDWLESKRD 595
+ CK +AF D L+ RD
Sbjct: 371 DALCKAGNFGEAF----DTLDVMRD 391
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 195/439 (44%), Gaps = 38/439 (8%)
Query: 159 AAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTL 218
A ++ Q+ M G PD FT+N +++G+CK G++++A LV++M + G PN+ TY L
Sbjct: 199 AYLKFQQ-MRSDGCKPDRFTYNILIHGVCKKGVVDEAIR-LVKQMEQEGNRPNVFTYTIL 256
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA---------------------- 256
I G+ VD+AL M + PN T VH
Sbjct: 257 IDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDS 316
Query: 257 -------------LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
L N KE + L +I + IPD T M K + ++
Sbjct: 317 NLQRVGYDAVLYCLSNNSMAKETGQFLRKI-GERGYIPDSSTFNAAMSCLLKGHDLVETC 375
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+++ ++ Y VL+ L Q + Y +M G+L ++YN +I L
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCL 435
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
K + A L M GI P+ +++ + G D+ + +L +L + P
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV 495
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
I ++LII+ R K++ +A ML++G+ PN TYN LI + +G+ R+ L +
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M GL PD+ YN I + C +R A +L + M++ G +PD +Y+ L++ G
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 544 TKEAEERYAKILKSGLMND 562
EA E ++ I + G + D
Sbjct: 616 ESEAREMFSSIERHGCVPD 634
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 198/440 (45%), Gaps = 5/440 (1%)
Query: 155 GKLEAAIRLQRIMVQKGFL---PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
G+L A + Q FL P +N +++ L K ++ A+ ++M G P+
Sbjct: 156 GRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAY-LKFQQMRSDGCKPD 214
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
TYN LI G C VD+A+ L M G +PN T IL+ G + EA K LE
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ K P+ T F+ F+ +AF + + + V Y+ ++ L N
Sbjct: 275 -MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNN 333
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ + ++ ++G +PD+ T+N + L K E C I G+ P Y
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
V+++ L + L M + ++ +N +ID + + + NA + M
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ PN+ T+N + + G++ + + + E++L G PDV+T++L+I C +
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A +EM++ G P+ I+Y L+R C G+T + + +AK+ ++GL D
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573
Query: 572 MYCKLEEPVKAFNLFQDWLE 591
+CK+ + KA L + L
Sbjct: 574 SFCKMRKVKKAEELLKTMLR 593
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 9/321 (2%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
L KIG RGY + S T +AA LL +E R+ V +G P + +V L
Sbjct: 343 LRKIGERGYIPDSS-TFNAAMSCLLKGHDLVETC-RIFDGFVSRGVKPGFNGYLVLVQAL 400
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
+ +L ++M G L ++ +YN +I C ++ A + M D GI PN
Sbjct: 401 LNAQRFSEGDRYL-KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPN 459
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
VT N + G +K+ +LE++L PD++T ++ ++ + +E AF +
Sbjct: 460 LVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK-PDVITFSLIINCLCRAKEIKDAFDCF 518
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
EM + +E + + YN+LI C + + +M + G+ PD + YN I + K
Sbjct: 519 KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKM 578
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
K ++A +L M ++G+ PD +Y +I+ L A+E+ + + VP
Sbjct: 579 RKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTK 638
Query: 427 NLIIDLYGRCKDVSNAILTRD 447
L+ +L D+ + L+R+
Sbjct: 639 RLVEEL-----DLRKSGLSRE 654
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 9/312 (2%)
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNT----LIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
M K +R++ E G +P+ T+N L+KG+ V + ++ G++P
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETC----RIFDGFVSRGVKPGF 390
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
+LV AL E + L++ + D + + + +D K R A
Sbjct: 391 NGYLVLVQALLNAQRFSEGDRYLKQ-MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
EM+ + ++V +N ++G + +G ++L G PD T++++I L +
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
+ ++A M + GI P+EI+Y ++IR C D R+ +L M N + P +N
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
I + + + V A ML+ G+ P+ FTY+ LI A +SG A + +
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629
Query: 488 GLFPDVVTYNLL 499
G PD T L+
Sbjct: 630 GCVPDSYTKRLV 641
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 192/413 (46%), Gaps = 3/413 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C EG +EAA L M +G +PD T+N +++G KVG ++ + EM + P
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF-EEMKDMCCEP 330
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+++TYN LI +C + L Y M G++PN V+ + LV A C+ G +++A K
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ +P+ T T +D K AF L NEM Q +E +VV Y LI+GLC
Sbjct: 391 VDMRRVGL-VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ M A +M GV+P+ +YN LI K A +L + GI PD +
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y I GLC I AK ++ M + +++ ++D Y + + + + D M
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLIGAACNLRSH 509
+ + V T+ LI K+ + +A + GL + + +I C
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
+ A L +MVQKG PD +YT L+ + +GN EA K+ + G+ D
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 211/433 (48%), Gaps = 7/433 (1%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ CE + A + C GKL + R M G P+V +++ +V+ CK G+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
M++A + V +M G +PN TY +LI C + ++ A L + M G++ N VT
Sbjct: 383 MQQAIKFYV-DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L+ LC+ +KEA+++ + ++ IP+L + + + K + +A L NE++
Sbjct: 442 ALIDGLCDAERMKEAEELFGK-MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
++ D++ Y I GLC + + A EM + G+ ++ Y L+ A +K G E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL-MVPKPIVWNLII 430
++L M ++ I +++ V+I GLC ++ + +A + + N+ + ++ +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 431 DLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
D G CKD V A + M++ G+ P+ Y +L+ + K GN+ A +L+++M G
Sbjct: 621 D--GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
+ D++ Y L+ + A EM+ +G PD + ++++ G EA
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Query: 549 ERYAKILKSGLMN 561
E + ++K L+
Sbjct: 739 ELQSYLMKHQLLT 751
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 197/435 (45%), Gaps = 43/435 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G LE AI+ M + P + N +++ K+G + + ++M+ G P + T
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF-KDMIGAGARPTVFT 264
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN +I C V+ A L+ M G+ P+ VT N ++ + G L + EE+
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM- 323
Query: 275 NDDKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
KD+ PD++T ++ + K + + EM+ N ++ +VV+Y+ L++ CK
Sbjct: 324 ---KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+M A + +M + G++P+ +TY LI A K G +A + M ++G+ + ++Y
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I GLC D R KE +L+G+ M
Sbjct: 441 TALIDGLC---DAERMKE-------------------AEELFGK-------------MDT 465
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
GV PN+ +YNALI VK+ N+ RA L E+ +G+ PD++ Y I C+L +
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A + EM + G + + + YT L+ GN E ++ + + V +L +
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 572 MYCKLEEPVKAFNLF 586
CK + KA + F
Sbjct: 586 GLCKNKLVSKAVDYF 600
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 169/383 (44%), Gaps = 1/383 (0%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
+P ++ L + +++A+ +S M + P +CN L+H + G + K+
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
++++ P + T + +D K + A L+ EM+ + D V YN +I+G
Sbjct: 249 FFKDMIGAGAR-PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
K ++ + EM PD TYN LI K GK M G+ P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
+SY ++ C + + +A + M +VP + +ID + ++S+A +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
ML+ GV NV TY ALI + + A L +M T G+ P++ +YN LI ++
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
D AL+L E+ +G +PDL+ Y + C + A+ ++ + G+ + +
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 569 LFNMYCKLEEPVKAFNLFQDWLE 591
L + Y K P + +L + E
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKE 570
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 196/396 (49%), Gaps = 5/396 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ GF PD+ T ++NG C ME+A +V +M+E G P++V Y T+I C
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMS-MVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
V+ AL L+ M + GI+P+ V LV+ LC +G ++A +L + K PD++T
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG-MTKRKIKPDVITF 250
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+D + K +F+ A L+NEM + S+ ++ Y LING C ++ A M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG PD Y LI K K +A I MS+ G+ + I+Y +I+G
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF---GVHPNVFTYNA 463
A+E+ M++ + P +N+++ V A++ + M K GV PN++TYN
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
L+ +G + +A + E+M + + ++TY ++I C A+ L + KG
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+P++++YT ++ G EA + K+ + G+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 170/398 (42%), Gaps = 36/398 (9%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L M+E PLP+++ + L+ + D + L + G+ + TCN+L++ C
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
++ P L A S +M + E D+
Sbjct: 119 QSSQ------------------PYL------------------ASSFLGKMMKLGFEPDI 142
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V + LING C M A +M++ G+ PD Y +I +L K G A +
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M GI PD + Y ++ GLC A LL M + P I +N +ID + +
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+A + M++ + PN+FTY +LI G + A + M TKG FPDVV Y
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
LI C + D A+++ EM QKG + I+YT L++ G A+E ++ ++ G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 559 LMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRDS 596
+ + +L + C + KA +F+D + + D
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 196/434 (45%), Gaps = 5/434 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+ A+ L MV+ LP + ++N + K+ + + L + G +L T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN-LCDHLQIMGVSHDLYTC 110
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N L+ +C + A M G +P+ VT L++ C ++EA M+ +++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PD+V T +D KN A SL+++M + DVV Y L+NGLC +
Sbjct: 171 MGIK-PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A M K+ + PD T+N LI A KEGK +A + M +M I P+ +Y +I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
G C + + A+++ + M P + + +I+ + +CK V +A+ M + G+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
N TY LI + G A + M+++G+ P++ TYN+L+ C AL +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 516 RREMVQK---GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
+M ++ G P++ +Y L+ C G ++A + + K + + I+
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 573 YCKLEEPVKAFNLF 586
CK + A NLF
Sbjct: 470 MCKAGKVKNAVNLF 483
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 161/351 (45%), Gaps = 9/351 (2%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + LC G + A+ L M G PDV + +VNGLC G A D L+R M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA-DSLLRGM 238
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ P+++T+N LI + A LY+ M I PN T L++ C G +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
EA++M ++ PD+V T ++ + K ++ A ++ EM Q + + + Y
Sbjct: 299 DEARQMF-YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM- 382
LI G + N+A M+ +GV P+ TYN+L+ L GK ++A I M K
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 383 --GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--D 438
G+ P+ +Y V++ GLC++ + +A + M M + I + G CK
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM--DIGIITYTIIIQGMCKAGK 475
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
V NA+ + GV PNV TY +I + G + A+ L +M G+
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 6/248 (2%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
++YT + + C+EG ++ A ++ +M KG PDV + ++NG CK ++ A
Sbjct: 283 FTYT---SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK- 338
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
+ EM + G N +TY TLI+G+ V + A ++S M G+ PN T N+L+H LC
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 259 ENGHLKEAKKMLEEILNDDKD--IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
NG +K+A + E++ + D P++ T V + N + +A ++ +MR+ M++
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
++ Y ++I G+CK + A C + KGV P+ TY +I L++EG EA +
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 377 GVMSKMGI 384
M + G+
Sbjct: 519 RKMKEDGV 526
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%)
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYN 357
+F +A L+ M ++ ++ + L+N + K + ++ + GV D +T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
+L+ + + A LG M K+G PD +++ +I G C + A ++ M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA 477
+ P +++ IID + V+ A+ D M +G+ P+V Y +L+ SG A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 478 YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE 537
SL M + + PDV+T+N LI A A +L EM++ P++ +YT L+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
C+ G EA + + + G D V L N +CK ++ A +F +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 395 IRGLCFDRDIVR----------AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
+R C R+I+R A +L M+ + +P I + ++++ + K I
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
D + GV +++T N L+ +S Y A S +M+ G PD+VT+ LI C
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 505 NLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
+ A+ + +MV+ G +PD++ YT ++ C G+ A + ++ G+ D V
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 565 PVQILFNMYC 574
L N C
Sbjct: 214 MYTSLVNGLC 223
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 163/314 (51%), Gaps = 5/314 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G L+ RL+ M + PDVFT++ ++N LCK M+ AH L EM + G +PN
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH-GLFDEMCKRGLIPN 344
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
V + TLI G+ +D Y M G+QP+ V N LV+ C+NG L A+ +++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ PD +T T +D + + + A + EM QN +E+D V ++ L+ G+CK
Sbjct: 405 GMIRRGLR-PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A EML+ G+ PD TY +++ A K+G + +L M G VP ++Y
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
V++ GLC + A LL MLN +VP I +N +++ + R + S + + +
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKP---E 580
Query: 452 FGVHPNVFTYNALI 465
G+ ++ +Y +++
Sbjct: 581 IGIVADLASYKSIV 594
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 177/377 (46%), Gaps = 17/377 (4%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLM---EKAHDWLVREMLEFGPLPNLVTYNTLIKGYC 223
++ GF +V+ N ++N CK G + +K D + + L+ P +V++NTLI GYC
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQ----PTVVSFNTLINGYC 286
Query: 224 TVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
V ++D+ L M + +P+ T + L++ALC+ + A + +E+ IP+
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL-IPND 345
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
V T + + +N E + +M ++ D+V YN L+NG CKN + A
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
M+++G+ PD TY LI + G A I M + GI D + + ++ G+C +
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
++ A+ L ML + P + + +++D + + D M G P+V TYN
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK- 522
L+ K G + A L + ML G+ PD +TYN L L H + +QK
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL------LEGHHRHANSSKRYIQKP 579
Query: 523 --GHRPDLISYTELVRE 537
G DL SY +V E
Sbjct: 580 EIGIVADLASYKSIVNE 596
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 1/337 (0%)
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
Y + D G N NIL++ C+ G++ +A+K+ +EI P +V+ ++ Y
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQ-PTVVSFNTLINGY 285
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K + F L ++M ++ DV Y+ LIN LCK M+ A+G EM K+G++P+
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
+ LI + G+ M G+ PD + Y ++ G C + D+V A+ ++
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
M+ + P I + +ID + R DV A+ R M + G+ + ++AL+ K G
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ A EML G+ PD VTY +++ A C +L +EM GH P +++Y
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
L+ C G K A+ +L G++ D + L
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 5/350 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C EG + A ++ + ++ P V + N ++NG CKVG +++ L +M + P
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF-RLKHQMEKSRTRP 308
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++ TY+ LI C N +D A L+ M G+ PN V L+H NG + K+
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+++L+ PD+V ++ + KN + + A ++ + M + + D + Y LI+G C+
Sbjct: 369 QKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ A EM + G+ D ++ L+ + KEG+ +A L M + GI PD+++
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +M+ C D +LL M ++ VP + +N++++ + + NA + D ML
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
GV P+ TYN L+ H + N + Y K E+ G+ D+ +Y ++
Sbjct: 548 NIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIV 594
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%)
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
+ + E+ ++V +N+L+N CK ++ A E+ K+ + P ++N LI
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
K G E + M K PD +Y +I LC + + A L M ++P
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+++ +I + R ++ + ML G+ P++ YN L+ K+G++ A ++ +
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
M+ +GL PD +TY LI C + AL++R+EM Q G D + ++ LV C G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+AE ++L++G+ D V ++ + +CK + F L ++
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 3/293 (1%)
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
IQ F L R++ +V + L++ + K +G+ E+L G + + +NIL
Sbjct: 190 IQCFRLS---RKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNIL 246
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
+ KEG +A + ++K + P +S+ +I G C ++ L M +
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
P ++ +I+ + + A D M K G+ PN + LI H ++G I
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
++ML+KGL PD+V YN L+ C A + M+++G RPD I+YT L+ C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
G+ + A E ++ ++G+ D V L CK + A ++ L +
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 111 LKGSLERLKMMREN-ISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQ 169
++ +LE K M +N I L ++G C +C EG++ A R R M++
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCG------------MCKEGRVIDAERALREMLR 478
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
G PD T+ +++ CK G + L++EM G +P++VTYN L+ G C + +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFK-LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
A L +M + G+ P+ +T N L+ + H +K+ +++
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK 578
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 220/472 (46%), Gaps = 10/472 (2%)
Query: 112 KGSLERLKMMRENISLVK----IGLRGYACEY----SYTEHAATVRLLCLEGKLEAAIRL 163
K S + +++R +S ++ IGL G + S E + + + K + I
Sbjct: 41 KTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF 100
Query: 164 QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYC 223
M G +++T+N ++N C+ L+ +M++ G P++VT N+L+ G+C
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRC-SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 224 TVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
N + A+ L M + G +P+ VT L+H L + EA +++ ++ PDL
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ-PDL 218
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
VT ++ K + A +L N+M +E +VV Y+ +I+ LCK + + A E
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
M KGV P+ TY+ LI L G+ +A +L M + I P+ +++ +I
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+V+A++L M+ + P ++ +I+ + + A +LM++ PNV TYN
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
LI K+ + + L EM +GL + VTY LI R D A + ++MV G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
P++++Y L+ C G +A + + +S + D I+ CK
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 175/324 (54%), Gaps = 6/324 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
L L K A+ L MVQ+G PD+ T+ +VNGLCK G + A + L+ +M
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN-LLNKMEAAKIEA 251
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+V Y+T+I C D AL L++ M + G++PN +T + L+ LC G +A ++L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+++ + K P+LVT + +D + K + ++A L+ EM + S++ ++ Y+ LING C
Sbjct: 312 SDMI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ A M++K LP+ TYN LI K + + + MS+ G+V + ++
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDL 448
Y +I G RD A+ + M++ + P + +N+++D G CK+ ++ A++ +
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD--GLCKNGKLAKAMVVFEY 488
Query: 449 MLKFGVHPNVFTYNALILAHVKSG 472
+ + + P+++TYN +I K+G
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 36/386 (9%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M + P P+++ ++ L+ +N D + M GI N T NIL++ C
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC---- 124
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+ A +L +M + E D+V N
Sbjct: 125 --------------------------------RCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
L+NG C ++ A +M++ G PD T+ LI L+ K EA ++ M +
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G PD ++Y ++ GLC D A LL M + ++++ +ID + + +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+ M GV PNV TY++LI G A L +M+ + + P++VT++ LI A
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
A +L EM+++ P++ +Y+ L+ C+ EA++ +++ + +
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 563 HVPVQILFNMYCKLEEPVKAFNLFQD 588
V L N +CK + K LF++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFRE 418
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%)
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYN 357
E A L+ M Q+ ++ ++ L++ + K +L + +M G+ + +TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
ILI + + A +LG M K+G PD ++ ++ G C I A L+ M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA 477
P + + +I S A+ D M++ G P++ TY A++ K G+ A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 478 YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+L +M + +VV Y+ +I + C R D AL L EM KG RP++I+Y+ L+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
C G +A + +++ + + V L + + K + VKA L+++ ++ D
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 121/226 (53%), Gaps = 4/226 (1%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+++ + LC G+ A RL M+++ P++ T + +++ K G + KA + L EM
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA-EKLYEEM 349
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
++ PN+ TY++LI G+C ++ + +A + M PN VT N L++ C+ +
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+ ++ E ++ + + VT T + +F+ R+ A ++ +M + +++ YN+
Sbjct: 410 DKGMELFRE-MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVL-PDAFTYNILIGALWKEGK 368
L++GLCKN + A E L++ + PD +TYNI+I + K GK
Sbjct: 469 LLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 34/155 (21%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD------ 197
+++ + C+ +L A ++ +M++K LP+V T+N ++NG CK ++K +
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 198 ----------------------------WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
+ ++M+ G PN++TYN L+ G C +
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
KA+ ++ + + ++P+ T NI++ +C+ G K
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 183/391 (46%), Gaps = 7/391 (1%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L EM+ PLP++V + L+ + + +Y M GI + + IL+H C
Sbjct: 58 LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFC 117
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
L A +L +++ + P +VT + + AFSL M ++ E +V
Sbjct: 118 RCSRLSFALSVLGKMMKLGYE-PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V YN LI+GLCKN +N+A EM KKG+ D TYN L+ L G+ +A +L
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID---LYGR 435
M K I PD +++ +I ++ A+EL M+ + + P + +N II+ ++GR
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
D T DLM G PNV TYN LI K + L + M +G D+ T
Sbjct: 297 LYDAKK---TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKIL 555
YN LI C + AL + MV + PD+I++ L+ C+ G + A ++ +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 556 KSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+S V I+ + CK ++ KA+ LF
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 8/244 (3%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLM---EKAHDWLVR 201
A + + +G L+ A L + M+Q P+ T+N I+NGLC G + +K D +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+ G PN+VTYNTLI G+C VD+ + L+ M+ G + T N L+H C+ G
Sbjct: 310 K----GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
L+ A + +++ + PD++T + + N E A +++MR++ + +VAY
Sbjct: 366 KLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N++I+GLCK + A+ C + +GV PDA TY I+I L K G REA ++ M +
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 382 MGIV 385
GI+
Sbjct: 485 EGII 488
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 72/440 (16%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+ E I + M G D+++ +++ C+ + A L + M++ G P++VT+
Sbjct: 86 RYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK-MMKLGYEPSIVTF 144
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+L+ G+C VN + A L M +G +PN V N L+ LC
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC----------------- 187
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
KN E A L NEM + + DVV YN L+ GLC + +
Sbjct: 188 -------------------KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A +M+K+ + PD T+ LI K+G EA + M + + P+ ++Y +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
GLC + AK+ M + P + +N +I + + + V + M G +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT-------------------- 495
++FTYN LI + + G + A + M+++ + PD++T
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 496 ---------------YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
YN++I C + A +L + +G +PD +YT ++ C
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 541 RGNTKEAEERYAKILKSGLM 560
G +EA+E ++ + G++
Sbjct: 469 NGPRREADELIRRMKEEGII 488
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 4/297 (1%)
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ + F AF+L+ EM + +V + L+ + ++ +M G+ D
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
+++ ILI + + A +LG M K+G P +++ ++ G C I A L+
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M+ + P +V+N +ID G CK +++ A+ + M K G+ +V TYN L+
Sbjct: 166 LMVKSGYEPNVVVYNTLID--GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
SG A + +M+ + + PDVVT+ LI + D A +L +EM+Q P+ ++
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
Y ++ C+ G +A++ + + G + V L + +CK + LFQ
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 426 WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
+ ++I + RC +S A+ M+K G P++ T+ +L+ I A+SL M+
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
G P+VV YN LI C + AL+L EM +KG D+++Y L+ C G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+A ++K + D V L +++ K +A L+++ ++S D
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 6/418 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
V+ +C EGK+E +L KG +P++ +N I+ G CK+G +E A+ + +E+ G
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY-LVFKELKLKG 270
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+P L T+ T+I G+C + L S + + G++ + N ++ A +G+ +
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+ + I+ +D PD+ T + ++ K + A +E + + + ++Y LI
Sbjct: 331 ESIGWIIANDCK-PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
CK++ ++A +M ++G PD TY ILI L G +A + + G+ PD
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
Y +++ GLC + AK L ML+ ++P V+ +ID + R D A
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
L ++ GV +V +NA+I +SG + A + M + L PD TY+ +I +
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
A+++ R M + +P++++YT L+ C +G+ K AEE + K + D VP
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF----KEMQLRDLVP 623
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 17/425 (4%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C+ + + LC EGK E A+ +KG +P+ ++ ++ CK + A
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
L+ +M E G P++VTY LI G +D A+ + + D G+ P+ N+L+
Sbjct: 401 KLLL-QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
LC+ G AK + E+L D +PD +D + ++ +F +A +++ + ++V
Sbjct: 460 LCKTGRFLPAKLLFSEML-DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
DVV +N +I G C++ +++ A M ++ ++PD FTY+ +I K+ A I
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN-LIIDLYGR 435
M K P+ ++Y +I G C D A+E M +VP + + LI L
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK----------SGNIYRAYSLKEE-- 483
+ A+ +LM+ PN T+N L+ VK G+ + SL E
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 484 --MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
M + G YN + C A + +MV+KG PD +S+ ++ C+
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Query: 542 GNTKE 546
GN+K+
Sbjct: 759 GNSKQ 763
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 194/440 (44%), Gaps = 42/440 (9%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
L+++ RG C+ + + L + G ++ A+ ++ ++ +G PD +N +++GL
Sbjct: 403 LLQMAERG--CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
CK G A L EML+ LP+ Y TLI G+ D+A ++S + G++ +
Sbjct: 461 CKTGRFLPAK-LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
V N ++ C +G L EA + +N++ +PD T + +D Y K ++ A ++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNR-MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
M +N + +VV Y LING C +A EM + ++P+ TY LI +L KE
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 367 GKTRE-ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIV 425
T E A Y +M VP+E+++ +++G K+ +L
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF--------VKKTSGKVLAEPDGSNHGQ 690
Query: 426 WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
+L + + R M G + YN+ ++ G + A +++M+
Sbjct: 691 SSLFSEFFHR-------------MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 486 TKGLFPDVVTYNLL------IGAA--------CNLRSHDFALQLRREMVQKGH--RPDLI 529
KG PD V++ + +G + CNL + +R V + H +P +
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVIC 797
Query: 530 SYTELVRESCIRGNTKEAEE 549
+ ++ + +TKE E
Sbjct: 798 EASTILHAMVEKADTKEPVE 817
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 188/447 (42%), Gaps = 55/447 (12%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
LL +L A ++ M +G D ++ +V G+C G +E L+ G +
Sbjct: 179 LLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK-LIEGRWGKGCI 237
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PN+V YNT+I GYC + ++ A ++ + G P T +++ C+ G
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG-------- 289
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+F+ + L +E+++ + V V N +I+
Sbjct: 290 ----------------------------DFVASDRLLSEVKERGLRVSVWFLNNIIDA-- 319
Query: 330 KNQLMNLAYGYACE-------MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+GY + ++ PD TYNILI L KEGK A L SK
Sbjct: 320 -----KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKK 374
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G++P+ +SY +I+ C ++ A +LL M P + + ++I + +A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+ + ++ GV P+ YN L+ K+G A L EML + + PD Y LI
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 503 ACNLRSHDF--ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
+RS DF A ++ V+KG + D++ + +++ C G EA ++ + L+
Sbjct: 495 F--IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 561 NDHVPVQILFNMYCKLEEPVKAFNLFQ 587
D + + Y K ++ A +F+
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFR 579
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 172/400 (43%), Gaps = 5/400 (1%)
Query: 194 KAHDWLVREMLE--FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
K DWL E + F ++ L+ Y N ++ L ++ + ++ +
Sbjct: 82 KLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVL---GNLRNENVKLTHEALS 138
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
++HA E+G L +A ++ + ++ +PD++ + K+R A +++EM
Sbjct: 139 HVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCD 198
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
VD + +L+ G+C + + KG +P+ YN +IG K G
Sbjct: 199 RGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN 258
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A + + G +P ++ MI G C + D V + LL + + N IID
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
R + + ++ P+V TYN LI K G A +E KGL P
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
+ ++Y LI A C + +D A +L +M ++G +PD+++Y L+ + G+ +A
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 552 AKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
K++ G+ D +L + CK + A LF + L+
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 192/457 (42%), Gaps = 42/457 (9%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PDVFT+N I+ + + + + EML+ PNL T+ L+ G A
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
++ M GI PNRVT IL+ LC+ G +A+K+ E + + PD V +D +
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE-MQTSGNYPDSVAHNALLDGF 278
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K ++AF L ++ + + Y+ LI+GL + + A+ MLKK + PD
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
Y ILI L K GK +A +L M GI PD Y +I+ LC + + L
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI-------- 465
M P ++I R V A + K G P+V T+NALI
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 466 ----------------------LAH---------VKSGNIYRAYSLKEEMLTKGLFPDVV 494
L+H V+SG+I +AY G PD+V
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
+YN+LI C D AL+L + KG PD ++Y L+ G +EA + +
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA- 577
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
K + + L C+ + + AFNL+ +L+
Sbjct: 578 -KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 36/382 (9%)
Query: 198 WLVREMLEFGPLP-NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
W E L+ G + + + LI Y + +KA+ + M + +P+ T N+++
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
+ M EE+ F+ AF+++NEM + +
Sbjct: 172 M-----------MREEVF------------------------FMLAFAVYNEMLKCNCSP 196
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
++ + +L++GL K + A +M +G+ P+ TY ILI L + G +A +
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M G PD +++ ++ G C +V A ELL + V ++ +ID R
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRA 316
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
+ + A MLK + P++ Y LI K+G I A L M +KG+ PD Y
Sbjct: 317 RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY 376
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
N +I A C + L+ EM + PD ++T L+ C G +EAEE + +I K
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 557 SGLMNDHVPVQILFNMYCKLEE 578
SG L + CK E
Sbjct: 437 SGCSPSVATFNALIDGLCKSGE 458
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 154/337 (45%), Gaps = 12/337 (3%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC G + A +L M G PD HN +++G CK+G M +A + L+R + G +
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFE-LLRLFEKDGFVL 301
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
L Y++LI G +A LY++M I+P+ + IL+ L + G +++A K+L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 271 EEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+ K I PD + + SL EM + D + +LI +C
Sbjct: 362 SSM--PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+N L+ A E+ K G P T+N LI L K G+ +EA +L M ++G P +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG-RPASL 477
Query: 390 SYKVMIRG-LCFDR-----DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
++ G FD I++A L + P + +N++I+ + R D+ A+
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
+++ G+ P+ TYN LI + G A+ L
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 14/296 (4%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
H A + C G++ A L R+ + GF+ + ++ +++GL + +A + L M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE-LYANM 329
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L+ P+++ Y LI+G ++ AL L SSM GI P+ N ++ ALC G L
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+E + + E +++ + PD T T+ + +N +A ++ E+ ++ V +N
Sbjct: 390 EEGRSLQLE-MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 324 LINGLCKNQ--------LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
LI+GLCK+ L + G + L + + N + + G +A
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLF----LRLSHSGNRSFDTMVESGSILKAYRD 504
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
L + G PD +SY V+I G C DI A +LL + + P + +N +I+
Sbjct: 505 LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ A ++ LC G LE LQ M + PD TH ++ +C+ GL+ +A + + E+
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE-IFTEI 434
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRV------TCNILVHAL 257
+ G P++ T+N LI G C + +A L M + G +P + + N +
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG-RPASLFLRLSHSGNRSFDTM 492
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
E+G + +A + L D PD+V+ V ++ + + + A L N ++ + D
Sbjct: 493 VESGSILKAYRDLAH-FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Query: 318 VVAYNVLINGL 328
V YN LINGL
Sbjct: 552 SVTYNTLINGL 562
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 131/325 (40%), Gaps = 42/325 (12%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH------- 196
H + +C G + A + + + G P V T N +++GLCK G +++A
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 197 -------------------DWLV---------REMLEF---GPLPNLVTYNTLIKGYCTV 225
D +V R++ F G P++V+YN LI G+C
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
+D AL L + + G+ P+ VT N L++ L G +EA K+ +D + P +
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK-DDFRHSPAVYR 589
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
S M + R+ + AF+LW + + +D N I K A E+
Sbjct: 590 S--LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERALRRLIELD 646
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ Y I + L + G+ EA + V+ + I+ S +I GLC +
Sbjct: 647 TRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLD 706
Query: 406 RAKELLWCMLNNLMVPKPIVWNLII 430
A E+ L+N P V N ++
Sbjct: 707 AAIEVFLYTLDNNFKLMPRVCNYLL 731
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR-AYSLKEEMLT 486
++I Y + A+ + M +F P+VFTYN ++ ++ + A+++ EML
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 487 KGLFPDVVTYNLLI-GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
P++ T+ +L+ G R+ D A ++ +M +G P+ ++YT L+ C RG+
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSD-AQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
+A + + ++ SG D V L + +CKL V+AF L +
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 189/401 (47%), Gaps = 5/401 (1%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P+ + N ++ LCK+ +++A + + R M E LP+ TY TL+ G C +D+A+
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIE-VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
L M G P+ V N+L+ LC+ G L K+++ + +P+ VT +
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC-VPNEVTYNTLIHGL 302
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
+ +A SL M + + V Y LINGL K + A M ++G +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
Y++LI L+KEGK EA + M++ G P+ + Y V++ GLC + AKE+L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
M+ + +P ++ ++ + + A+ M K G N F Y+ LI G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV---QKGHRPDLIS 530
+ A + +MLT G+ PD V Y+ +I C + S D AL+L EM+ + +PD+++
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
Y L+ C++ + A + +L G D + N
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 167/382 (43%), Gaps = 60/382 (15%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ C S + + LC +G L +L M KG +P+ T+N +++GLC G
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
++KA L R M+ +PN VTY TLI G A+ L SSM + G N+ +
Sbjct: 308 LDKAVSLLER-MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+L+ L + G +E A SLW +M +
Sbjct: 367 VLISGLFKEGKAEE------------------------------------AMSLWRKMAE 390
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ ++V Y+VL++GLC+ N A M+ G LP+A+TY+ L+ +K G E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE--LLWC-MLNNLMVPKPIVWNL 428
A + M K G ++ Y V+I GLC + R KE ++W ML + P + ++
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGLC---GVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 429 IIDLYGRCKDVSNAILTRDLMLKF----------GVHPNVFTYNALILAHVKSGNIYRAY 478
II G C I + D LK P+V TYN L+ +I RA
Sbjct: 508 IIK--GLC-----GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAV 560
Query: 479 SLKEEMLTKGLFPDVVTYNLLI 500
L ML +G PDV+T N +
Sbjct: 561 DLLNSMLDRGCDPDVITCNTFL 582
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 187/424 (44%), Gaps = 48/424 (11%)
Query: 156 KLEAAIRLQ-RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
KL + IRL+ R+++++ F+ + K L +KA D R + EF ++ +
Sbjct: 98 KLLSRIRLENRVIIERSFI-------VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKS 150
Query: 215 YNTLIKGYCTVNSVDKAL----YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+N+++ + L Y+ +S + I PN ++ N+++ ALC+
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK----------- 199
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
F+D +A ++ M + D Y L++GLCK
Sbjct: 200 ----------------LRFVD---------RAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ ++ A EM +G P YN+LI L K+G ++ M G VP+E++
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y +I GLC + +A LL M+++ +P + + +I+ + + ++A+ M
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
+ G H N Y+ LI K G A SL +M KG P++V Y++L+ C +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A ++ M+ G P+ +Y+ L++ G +EA + + ++ K+G + +L
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 571 NMYC 574
+ C
Sbjct: 475 DGLC 478
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 28/300 (9%)
Query: 139 YSYTEHAATVRLLCL--EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
Y +H +V + L EGK E A+ L R M +KG P++ ++ +V+GLC+ G +A
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
+ L R M+ G LPN TY++L+KG+ ++A+ ++ M TG N+ ++L+
Sbjct: 418 EILNR-MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM---RQNS 313
LC G +KEA + ++L PD V + + A L++EM +
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIK-PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI--------------- 358
+ DVV YN+L++GLC + ++ A ML +G PD T N
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG 595
Query: 359 ------LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
L+ L K + AC I+ VM + P ++ +++R +C + I A + W
Sbjct: 596 RSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCW 655
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 10/351 (2%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
T + ++ + +G +K+L I +++ I + VF Y K +A L++
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR-AYGKAHLPDKAVDLFHR 137
Query: 309 M-RQNSMEVDVVAYNVLINGLCKNQLMNLA---YGYACEM-LKKGVLPDAFTYNILIGAL 363
M + + V ++N ++N + L + Y Y + + P+ ++N++I AL
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
K A + M + +PD +Y ++ GLC + I A LL M + P P
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 424 IVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+++N++ID G CK D++ D M G PN TYN LI G + +A SL
Sbjct: 258 VIYNVLID--GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
E M++ P+ VTY LI R A++L M ++G+ + Y+ L+
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
G +EA + K+ + G + V +L + C+ +P +A + + S
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 195/435 (44%), Gaps = 7/435 (1%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE-MLEFGPLPNLV 213
G E A+ + R M PD I+NGL + + W+ + M+ G +P++
Sbjct: 146 GLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSV--WVDYQLMISRGLVPDVH 200
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y L + K L M GI+PN I + LC + ++EA+KM E +
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFE-L 259
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ +P+L T + +D Y K QA+ L+ E+ + +VV + L++G CK +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A M+K GV P+ + YN LI K G EA +L M + + PD +Y +
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I GLC + + A L M N + P +N +I Y + ++ A+ M G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
V PN+ T++ LI + +I A L EM KG+ PDVVTY LI A + AL
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+L +M++ G P+ ++ LV G A + Y + + +HV L
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 574 CKLEEPVKAFNLFQD 588
C+ ++A F D
Sbjct: 560 CQNGYILRASRFFSD 574
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC+E ++ A RL + M + P T+N +++G CK ME+A D L EM G P
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD-LCSEMTASGVEP 442
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N++T++TLI GYC V + A+ LY M GI P+ VT L+ A + ++KEA ++
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++L P+ T +D ++K A + E Q + V + LI GLC+
Sbjct: 503 SDMLEAGIH-PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
N + A + +M G+ PD +Y ++ +E + + + M K GI+P+ +
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Query: 391 YKVMIR 396
+++ R
Sbjct: 622 NQLLAR 627
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 204/430 (47%), Gaps = 4/430 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+++ C + + E A M ++GF PDVF+++ ++N L K G ++ A + L EM E G
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE-LFDEMSERG 214
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEA 266
P++ YN LI G+ A+ L+ + D+ + PN T NI++ L + G + +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
K+ E + ++++ DL T + + +A S++NE+ + +DVV YN ++
Sbjct: 275 LKIWERMKQNERE-KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G C+ + + M K + + +YNILI L + GK EA I +M G
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
D+ +Y + I GLC + + +A ++ + ++ + IID + K + A
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M K GV N NALI ++ + A EM G P VV+YN+LI C
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
A +EM++ G +PDL +Y+ L+ C A E + + L+SGL D +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 567 QILFNMYCKL 576
IL + C +
Sbjct: 573 NILIHGLCSV 582
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 3/393 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+++ + LC G ++ A + + ++ DV T+N ++ G C+ G ++++ + + +
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE--LWRI 350
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+E N+V+YN LIKG +D+A ++ M G ++ T I +H LC NG++
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+A +++E+ + + D+ +D K + +A +L EM ++ +E++ N
Sbjct: 411 NKALGVMQEVESSGGHL-DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI GL ++ + A + EM K G P +YNILI L K GK EA + M + G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
PD +Y +++ GLC DR I A EL L + + ++ N++I + +A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
M N+ TYN L+ K G+ RA + M GL PD+++YN ++
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
C R +A++ + G P + ++ LVR
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 110 MLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQ 169
++KG LE K+ + + +GYA + T + + LC+ G + A+ + + +
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADK--TTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
G DV+ + I++ LCK +E+A + LV+EM + G N N LI G + +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASN-LVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
+A + M G +P V+ NIL+ LC+ G EA ++E+L + PDL T ++
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK-PDLKTYSIL 540
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+ ++R+ A LW++ Q+ +E DV+ +N+LI+GLC ++ A M +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
+ TYN L+ +K G + A I G M KMG+ PD ISY +++GLC R + A E
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
Query: 410 LLWCMLNNLMVPKPIVWNLII 430
N+ + P WN+++
Sbjct: 661 FFDDARNHGIFPTVYTWNILV 681
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 187/404 (46%), Gaps = 2/404 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++ + L GKL+ A+ L M ++G PDV +N +++G K + A + R +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ PN+ T+N +I G VD L ++ M + + T + L+H LC+ G++
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+A+ + E L++ K D+VT + + + + ++ LW M + V++V+YN+
Sbjct: 307 DKAESVFNE-LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI GL +N ++ A M KG D TY I I L G +A ++ + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
D +Y +I LC + + A L+ M + + V N +I R + A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
M K G P V +YN LI K+G A + +EML G PD+ TY++L+
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
C R D AL+L + +Q G D++ + L+ C G +A
Sbjct: 545 CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 189/391 (48%), Gaps = 8/391 (2%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+++ +++ M Q D++T++ +++GLC G ++KA + E+ E ++VT
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES-VFNELDERKASIDVVT 327
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNT++ G+C + ++L L+ M N V+ NIL+ L ENG + EA M+ ++
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEAT-MIWRLM 385
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D T +F+ N +A + E+ + +DV AY +I+ LCK + +
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A EM K GV ++ N LIG L ++ + EA + L M K G P +SY ++
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKF 452
I GLC A + ML N P ++++ L G C+D + A+ L+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL--LCGLCRDRKIDLALELWHQFLQS 563
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G+ +V +N LI G + A ++ M + ++VTYN L+ + + A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCI-RG 542
+ M + G +PD+ISY +++ C+ RG
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 179/387 (46%), Gaps = 15/387 (3%)
Query: 94 SGHEKGQHAVFNALD-----------NMLKGSLERLKMMRENISLVKIGLRGYACEYSYT 142
+G+ +VFN LD N + G R ++E++ L +I + +
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI--MEHKNSVNIV 360
Query: 143 EHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
+ ++ L GK++ A + R+M KG+ D T+ ++GLC G + KA +++E
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG-VMQE 419
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
+ G ++ Y ++I C +++A L M+ G++ N CN L+ L +
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
L EA L E + + P +V+ + + K +F +A + EM +N + D+ Y+
Sbjct: 480 LGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+L+ GLC+++ ++LA + L+ G+ D +NILI L GK +A ++ M
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
+ ++Y ++ G D RA + M + P I +N I+ C+ VS A
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHV 469
+ D G+ P V+T+N L+ A V
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 6/386 (1%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
++ K + ++A D R FG P + +YNTL+ + K L++
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G+ PN T N+L+ C+ ++A+ L+ + + PD+ + + ++ K +
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVFSYSTVINDLAKAGKLDD 202
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK-KGVLPDAFTYNILI 360
A L++EM + + DV YN+LI+G K + A +L+ V P+ T+NI+I
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
L K G+ + I M + D +Y +I GLC ++ +A+ + +
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 421 PKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+ +N ++ + RC + ++ L R + K V N+ +YN LI +++G I A
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATM 380
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
+ M KG D TY + I C + AL + +E+ G D+ +Y ++ C
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 540 IRGNTKEAEERYAKILKSGL-MNDHV 564
+ +EA ++ K G+ +N HV
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHV 466
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 2/309 (0%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P + + ++ + + +++++ SL+ + ++ YNVLI CK + A G+
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
M K+G PD F+Y+ +I L K GK +A + MS+ G+ PD Y ++I G
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 401 DRDIVRAKELLWCMLNNLMV-PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
++D A EL +L + V P N++I +C V + + + M + +++
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
TY++LI +GN+ +A S+ E+ + DVVTYN ++G C +L+L R M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEP 579
K + +++SY L++ G EA + + G D I + C
Sbjct: 352 EHK-NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 580 VKAFNLFQD 588
KA + Q+
Sbjct: 411 NKALGVMQE 419
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
FG P + +YN L+ A V++ + SL T G+ P++ TYN+LI +C + +
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A M ++G +PD+ SY+ ++ + G +A E + ++ + G+ D IL +
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 572 MYCKLEEPVKAFNLFQDWLE 591
+ K ++ A L+ LE
Sbjct: 228 GFLKEKDHKTAMELWDRLLE 247
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G P SY ++ + V+ + L + P +N++I + + K+ A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
D M K G P+VF+Y+ +I K+G + A L +EM +G+ PDV YN+LI
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 503 AC-----------------------NLRSH-------------DFALQLRREMVQKGHRP 526
N+++H D L++ M Q
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
DL +Y+ L+ C GN +AE + ++ + D V + +C+ + ++ L+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 587 Q 587
+
Sbjct: 349 R 349
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 171/329 (51%), Gaps = 3/329 (0%)
Query: 180 NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA 239
N ++N L K+ +E A L E L F + T+N LI+G C V +KAL L M+
Sbjct: 175 NSLLNTLVKLDRVEDAMK-LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREF 299
G +P+ VT N L+ C++ L +A +M +++ + PD+VT T + Y K +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
+A SL ++M + + V +NVL++G K M A +M+ G PD T+ L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I + G+ + + M+ G+ P+ +Y ++I LC + +++A+ELL + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+P+P ++N +ID + + V+ A + + M K P+ T+ LI+ H G ++ A S
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+ +M+ G PD +T + L+ +C L++
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL--SCLLKA 500
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 6/309 (1%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMV 168
N L +L +L + + + L LR +C + T + +R LC GK E A+ L +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMS 233
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL--PNLVTYNTLIKGYCTVN 226
G PD+ T+N ++ G CK + KA + + ++ G + P++VTY ++I GYC
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMF--KDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ +A L M GI P VT N+LV + G + A+++ ++++ PD+VT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC-FPDVVTF 350
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T +D Y + + Q F LW EM M + Y++LIN LC + A ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
K ++P F YN +I K GK EA I+ M K PD+I++ ++I G C +
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 407 AKELLWCML 415
A + M+
Sbjct: 471 AVSIFHKMV 479
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 174/411 (42%), Gaps = 41/411 (9%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML--- 270
TYN L + C D A ++ M G+ PN LV + E G L A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 271 ----------EEILNDDKDIPDLVTSTVFMDHYFK------NREF-------------IQ 301
+LN + + + D + + + F +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM---LKKGVL--PDAFTY 356
A L M E D+V YN LI G CK+ +N A EM +K G + PD TY
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN----KASEMFKDVKSGSVCSPDVVTY 280
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+I K GK REA +L M ++GI P +++ V++ G +++ A+E+ M++
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
P + + +ID Y R VS + M G+ PN FTY+ LI A + +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
A L ++ +K + P YN +I C + A + EM +K +PD I++T L+
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
C++G EA + K++ G D + V L + K +A++L Q
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 134 GYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
G C + + + C GK+ A L M++ G P T N +V+G K G M
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
A + + +M+ FG P++VT+ +LI GYC V V + L+ M G+ PN T +IL
Sbjct: 330 TAEE-IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
++ALC L +A+++L ++ + D IP +D + K + +A + EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDI-IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+ D + + +LI G C M A +M+ G PD T + L+ L K G +EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA- 506
Query: 374 YILGVMSKMG----IVPDE 388
Y L +++ G +VP E
Sbjct: 507 YHLNQIARKGQSNNVVPLE 525
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 118/304 (38%), Gaps = 71/304 (23%)
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTR-------- 370
YN+L LCK L +LA G E +K GV P+ L+ + ++GK
Sbjct: 105 TYNLLTRSLCKAGLHDLA-GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 371 ----EAC-----YILGVMSKMGIVPDEI----------------SYKVMIRGLCFDRDIV 405
E C +L + K+ V D + ++ ++IRGLC
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+A ELL +M FG P++ TYN LI
Sbjct: 224 KALELL-----------------------------------GVMSGFGCEPDIVTYNTLI 248
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGL-FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
KS + +A + +++ + + PDVVTY +I C A L +M++ G
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
P +++ LV G AEE K++ G D V L + YC++ + + F
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 585 LFQD 588
L+++
Sbjct: 369 LWEE 372
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 171/329 (51%), Gaps = 3/329 (0%)
Query: 180 NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA 239
N ++N L K+ +E A L E L F + T+N LI+G C V +KAL L M+
Sbjct: 175 NSLLNTLVKLDRVEDAMK-LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREF 299
G +P+ VT N L+ C++ L +A +M +++ + PD+VT T + Y K +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
+A SL ++M + + V +NVL++G K M A +M+ G PD T+ L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I + G+ + + M+ G+ P+ +Y ++I LC + +++A+ELL + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+P+P ++N +ID + + V+ A + + M K P+ T+ LI+ H G ++ A S
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+ +M+ G PD +T + L+ +C L++
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL--SCLLKA 500
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 6/309 (1%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMV 168
N L +L +L + + + L LR +C + T + +R LC GK E A+ L +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMS 233
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL--PNLVTYNTLIKGYCTVN 226
G PD+ T+N ++ G CK + KA + + ++ G + P++VTY ++I GYC
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMF--KDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ +A L M GI P VT N+LV + G + A+++ ++++ PD+VT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC-FPDVVTF 350
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T +D Y + + Q F LW EM M + Y++LIN LC + A ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
K ++P F YN +I K GK EA I+ M K PD+I++ ++I G C +
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 407 AKELLWCML 415
A + M+
Sbjct: 471 AVSIFHKMV 479
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 174/411 (42%), Gaps = 41/411 (9%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML--- 270
TYN L + C D A ++ M G+ PN LV + E G L A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 271 ----------EEILNDDKDIPDLVTSTVFMDHYFK------NREF-------------IQ 301
+LN + + + D + + + F +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM---LKKGVL--PDAFTY 356
A L M E D+V YN LI G CK+ +N A EM +K G + PD TY
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN----KASEMFKDVKSGSVCSPDVVTY 280
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+I K GK REA +L M ++GI P +++ V++ G +++ A+E+ M++
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
P + + +ID Y R VS + M G+ PN FTY+ LI A + +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
A L ++ +K + P YN +I C + A + EM +K +PD I++T L+
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
C++G EA + K++ G D + V L + K +A++L Q
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 134 GYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
G C + + + C GK+ A L M++ G P T N +V+G K G M
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
A + + +M+ FG P++VT+ +LI GYC V V + L+ M G+ PN T +IL
Sbjct: 330 TAEE-IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
++ALC L +A+++L ++ + D IP +D + K + +A + EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDI-IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+ D + + +LI G C M A +M+ G PD T + L+ L K G +EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA- 506
Query: 374 YILGVMSKMG----IVPDE 388
Y L +++ G +VP E
Sbjct: 507 YHLNQIARKGQSNNVVPLE 525
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 118/304 (38%), Gaps = 71/304 (23%)
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTR-------- 370
YN+L LCK L +LA G E +K GV P+ L+ + ++GK
Sbjct: 105 TYNLLTRSLCKAGLHDLA-GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 371 ----EAC-----YILGVMSKMGIVPDEI----------------SYKVMIRGLCFDRDIV 405
E C +L + K+ V D + ++ ++IRGLC
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+A ELL +M FG P++ TYN LI
Sbjct: 224 KALELL-----------------------------------GVMSGFGCEPDIVTYNTLI 248
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGL-FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
KS + +A + +++ + + PDVVTY +I C A L +M++ G
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
P +++ LV G AEE K++ G D V L + YC++ + + F
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 585 LFQD 588
L+++
Sbjct: 369 LWEE 372
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 198/430 (46%), Gaps = 4/430 (0%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
MV+ G +V T N +VNG C G +E A L R + EF P+ VTYNT++K
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ L M G+ PNRVT N LV+ C+ G LKEA +++ E++ +PDL T
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQTNVLPDLCTY 313
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ ++ + L + M+ ++ DVV YN LI+G + L A +M
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACY--ILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
GV + T+NI + L KE K REA + ++ G PD ++Y +I+ D+
Sbjct: 374 DGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 405 VRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
A E++ M + I N I+D + + + A + K G + TY L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I+ + + +A + +EM + P V T+N LIG C+ + A++ E+ + G
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
PD ++ ++ C G ++A E Y + +K D+ IL N CK KA N
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 585 LFQDWLESKR 594
F +E +
Sbjct: 613 FFNTLIEERE 622
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 189/405 (46%), Gaps = 6/405 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G L+ A ++ +M Q LPD+ T+N ++NGLC G M + + L+ M P+
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE-LMDAMKSLKLQPD 344
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+VTYNTLI G + +A L M + G++ N+VT NI + LC+ + + ++
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E+++ PD+VT + Y K + A + EM Q ++++ + N +++ LCK
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ ++ A+ K+G + D TY LI ++E K +A + M K+ I P ++
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLM 449
+I GLC A E + + ++P +N II G CK+ V A +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII--LGYCKEGRVEKAFEFYNES 582
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
+K P+ +T N L+ K G +A + ++ + D VTYN +I A C +
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKL 641
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
A L EM +KG PD +Y + G E +E K
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 200/435 (45%), Gaps = 45/435 (10%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKG---YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ ++M+ PNL+T NTL+ G Y + S+ A ++ M G+ N T N+LV+
Sbjct: 153 IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVN 212
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
C G L++A MLE ++++ K PD VT + K L +M++N +
Sbjct: 213 GYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV 272
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
+ V YN L+ G CK + A+ M + VLPD TYNILI L G RE +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDI-VRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+ M + + PD ++Y +I G CF+ + + A++L+ M N+ + + N I L
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHN--ISLKW 389
Query: 435 RCKDVSNAILTR---DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
CK+ +TR +L+ G P++ TY+ LI A++K G++ A + EM KG+
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 492 DVVTYNLLIGAACNLRSHDFALQL------------------------RREMVQKGHR-- 525
+ +T N ++ A C R D A L R E V+K
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 526 ---------PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
P + ++ L+ C G T+ A E++ ++ +SGL+ D + YCK
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 577 EEPVKAFNLFQDWLE 591
KAF + + ++
Sbjct: 570 GRVEKAFEFYNESIK 584
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 28/203 (13%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC GK E A+ + + G LPD T N I+ G CK G +EKA ++ E ++ P
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF-YNESIKHSFKP 589
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ T N L+ G C +KAL ++++ + + + VT N ++ A C++ LKEA +L
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 271 EEILNDDKDI-PDLVTSTVFMDHYFKN------REFIQAFS---------LWNEMRQN-- 312
E+ ++K + PD T F+ ++ E ++ FS L E +N
Sbjct: 649 SEM--EEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPA 706
Query: 313 ------SMEVDVVAYNVLINGLC 329
+ + +AY+ +I+ LC
Sbjct: 707 TSESKEELNTEAIAYSDVIDELC 729
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 193/453 (42%), Gaps = 40/453 (8%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ + C+ S + + L E +++ + R M + GF P+VFT+N ++ LCK
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK--------------------- 230
++ A LV EM G P+ V+Y T+I C V V +
Sbjct: 197 VDGAKKLLV-EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALING 255
Query: 231 ---------ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP 281
A L M + GI PN ++ + L++ LC +G ++ A L ++L P
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH-P 314
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
++ T + + F A LWN+M R ++ +VVAYN L+ G C + + A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
M + G P+ TY LI K G A YI M G P+ + Y M+ LC
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR 434
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK----DVSNAILTRDLMLKFGVHP 456
A+ L+ M P +N I G C D + + R + + P
Sbjct: 435 HSKFKEAESLIEIMSKENCAPSVPTFNAFIK--GLCDAGRLDWAEKVF-RQMEQQHRCPP 491
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
N+ TYN L+ K+ I AY L E+ +G+ TYN L+ +CN ALQL
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+M+ G PD I+ ++ C +G + A +
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 217/473 (45%), Gaps = 37/473 (7%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME-------------- 193
++ LC K++ A +L M KG PD ++ +++ +C+VGL++
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS 247
Query: 194 ----------KAHDW-----LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM 238
K HD+ L+REM+E G PN+++Y+TLI C ++ A + M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 239 ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNRE 298
G PN T + LV G +A + +++ P++V + + +
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 299 FIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
++A S+++ M + ++ Y LING K ++ A +ML G P+ Y
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
++ AL + K +EA ++ +MSK P ++ I+GLC + A+++ M
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 419 MVPKPIV-WNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
P IV +N ++D + + A LTR++ ++ GV + TYN L+ +G
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-GVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH---RPDLISYTE 533
A L +M+ G PD +T N++I A C + A Q+ ++V G RPD+ISYT
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLVSCGRRKWRPDVISYTN 605
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
++ C ++ +++ +G++ +L N + L++ V+A + F
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI-LDDIVRAHDQF 657
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 195/421 (46%), Gaps = 24/421 (5%)
Query: 102 AVFNALDNML------KGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEG 155
+V+NAL N L KG+ E +MRE +V+ G+ YS + +LC G
Sbjct: 247 SVYNALINGLCKEHDYKGAFE---LMRE---MVEKGISPNVISYS-----TLINVLCNSG 295
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
++E A M+++G P+++T + +V G G A D + + FG PN+V Y
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
NTL++G+C+ ++ KA+ ++S M + G PN T L++ + G L A + ++L
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
P++V T ++ ++ +F +A SL M + + V +N I GLC ++
Sbjct: 416 SGC-CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 336 LAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A +M ++ P+ TYN L+ L K + EA + + G+ +Y +
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML--KF 452
+ G C A +L+ M+ + P I N+II Y + A DL+ +
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR 594
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC---NLRSH 509
P+V +Y +I +S L E M++ G+ P + T+++LI +R+H
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAH 654
Query: 510 D 510
D
Sbjct: 655 D 655
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 33/397 (8%)
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
VQK +P V N VN L L E + ++E+ ++K +
Sbjct: 13 VQKPLIPFVLNTNLNVNHL----LTESPNHAEIKEL-------------DVVKRLRQESC 55
Query: 228 VDKALYLYSSMADTGI-QPNRVTCNILVHALCENGHLKEAKKMLEEI-LNDDKDIPDLVT 285
V AL+ + S+A++ + + +T +++ L +G + + +L+++ L DL
Sbjct: 56 VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 115
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
S + + E +A ++ +++ + V YN +++ L + + Y +M
Sbjct: 116 SVISVYRQVGLAE--RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ G P+ FTYN+L+ AL K K A +L MS G PD +SY +I +C +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNA 463
+EL P V+N +I+ G CK D A M++ G+ PNV +Y+
Sbjct: 234 EGRELA-----ERFEPVVSVYNALIN--GLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF-ALQLRREMVQK 522
LI SG I A+S +ML +G P++ T + L+ C LR F AL L +M++
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV-KGCFLRGTTFDALDLWNQMIRG 345
Query: 523 -GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
G +P++++Y LV+ C GN +A ++ + + G
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 7/347 (2%)
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
+T+ +I+ VD YL M G + ++ + G + A +M
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
I D P + +D + ++ +M+++ E +V YNVL+ LCKN
Sbjct: 137 IKEFGCD-PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
++ A EM KG PDA +Y +I ++ + G +E G P Y
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE-----GRELAERFEPVVSVYN 250
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I GLC + D A EL+ M+ + P I ++ +I++ + A MLK
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLIGAACNLRSHDF 511
G HPN++T ++L+ G + A L +M+ GL P+VV YN L+ C+ +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
A+ + M + G P++ +Y L+ RG+ A + K+L SG
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
++++VMIR L D + + LL M ++ +I +Y + A+
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+ +FG P+V YN ++ + I Y + +M G P+V TYN+L+ A C
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE---ERYAKILKSGLMNDHVP 565
D A +L EM KG PD +SYT ++ C G KE ER+ ++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV-------- 248
Query: 566 VQILFNMYCKLEEPVKAFNLFQDWLE 591
L N CK + AF L ++ +E
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVE 274
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 191/383 (49%), Gaps = 3/383 (0%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
R MV GF PDV T + I+N LCK G + + L+REM E PN VTY TL+
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEG-GLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
N AL LYS M GI + V +L+ L + G L+EA+K + +L D++ +P++V
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ-VPNVV 365
Query: 285 TSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
T T +D K + A + +M + S+ +VV Y+ +ING K ++ A +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
+ V+P+ FTY +I L+K GK A + M +G+ + ++ L I
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 405 VRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
K L+ M++ + I + +ID++ + D A+ + M + G+ +V +YN L
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I +K G + ++ K M KG+ PD+ T+N+++ + + L+L +M G
Sbjct: 546 ISGMLKFGKVGADWAYK-GMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604
Query: 525 RPDLISYTELVRESCIRGNTKEA 547
+P L+S +V C G +EA
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEA 627
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 209/433 (48%), Gaps = 3/433 (0%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ A V LC G L +A + M++K +P+V T++ ++NG K G++E+A L+R+M
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS-LLRKM 425
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ +PN TY T+I G + A+ L M G++ N + LV+ L G +
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
KE K +++++++ + D + T +D +FK + A + EM++ M DVV+YNV
Sbjct: 486 KEVKGLVKDMVSKGVTL-DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI+G+ K + + Y M +KG+ PD T+NI++ + K+G + + M G
Sbjct: 545 LISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
I P +S +++ LC + + A +L M+ + P + + +D + K
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
T + +L +G+ + YN LI K G +A + +M +G PD VT+N L+
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
AL M++ G P++ +Y ++R G KE ++ +++ G+ D
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 564 VPVQILFNMYCKL 576
L + K+
Sbjct: 784 FTYNALISGQAKI 796
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 223/505 (44%), Gaps = 82/505 (16%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C G+L AI L R + D T+N +++GLC+ GL ++A+ +L EM++ G LP
Sbjct: 139 FCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFL-SEMVKMGILP 194
Query: 211 NLVTYNTLIKGYCTVNSVDKALYL----------------------------YSSMADTG 242
+ V+YNTLI G+C V + +A L Y M +G
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG 254
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
P+ VT + +++ LC+ G + E +L E + + P+ VT T +D FK + A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLRE-MEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
+L+++M + VD+V Y VL++GL K + A +L+ +P+ TY L+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
L K G A +I+ M + ++P+ ++Y MI G + A LL M + +VP
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 423 PIVWNLIID--------------------------------------LYGRCKDVSNAIL 444
+ +ID GR K+V L
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG--L 491
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
+D++ K GV + Y +LI K G+ A + EEM +G+ DVV+YN+LI
Sbjct: 492 VKDMVSK-GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 505 NLR--SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
D+A + RE KG PD+ ++ ++ +G+++ + + K+ G+
Sbjct: 551 KFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS 607
Query: 563 HVPVQILFNMYC---KLEEPVKAFN 584
+ I+ M C K+EE + N
Sbjct: 608 LMSCNIVVGMLCENGKMEEAIHILN 632
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 176/373 (47%), Gaps = 16/373 (4%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M ++G DV ++N +++G+ K G + DW + M E G P++ T+N ++
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQG 587
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ L L+ M GI+P+ ++CNI+V LCENG ++EA +L +++ + P+L T
Sbjct: 588 DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIH-PNLTTY 646
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+F+D K++ F + +++ YN LI LCK + A +M
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+G +PD T+N L+ + R+A VM + GI P+ +Y +IRGL I
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+ L M + M P +N +I + ++ ++ M+ G+ P TYN LI
Sbjct: 767 VDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD------------FALQ 514
G + +A L +EM +G+ P+ TY +I C L +H A
Sbjct: 827 EFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKG 886
Query: 515 LRREMV-QKGHRP 526
L +EMV +KG+ P
Sbjct: 887 LLKEMVEEKGYIP 899
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 193/452 (42%), Gaps = 40/452 (8%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+L A R M G +PD N +++ GL+ + +M+ G P++
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 216 NTLIKGYC----------------------TVNSV----------DKALYLYSSMADTGI 243
N LI +C T N+V D+A S M GI
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGI 192
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
P+ V+ N L+ C+ G+ AK +++EI +L+T T+ + Y+ +A+
Sbjct: 193 LPDTVSYNTLIDGFCKVGNFVRAKALVDEISE-----LNLITHTILLSSYYNLHAIEEAY 247
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+M + + DVV ++ +IN LCK + EM + V P+ TY L+ +L
Sbjct: 248 ---RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+K R A + M GI D + Y V++ GL D+ A++ +L + VP
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
+ + ++D + D+S+A ML+ V PNV TY+++I +VK G + A SL +
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M + + P+ TY +I + A++L +EM G + LV G
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
KE + ++ G+ D + L +++ K
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 163/378 (43%), Gaps = 47/378 (12%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
++TL + Y + + A S+M G+ P+ N L+H NG + +
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHD--------- 111
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
Q ++++M + DV A NVLI+ CK +
Sbjct: 112 --------------------------QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRL 145
Query: 335 NLAYGYACEMLKKGVLP-DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ +A +L+ V+ D TYN +I L + G EA L M KMGI+PD +SY
Sbjct: 146 S----FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I G C + VRAK L+ + + I +++ Y + A RD+++ G
Sbjct: 202 LIDGFCKVGNFVRAKALV----DEISELNLITHTILLSSYYNLHAIEEAY--RDMVMS-G 254
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P+V T++++I K G + L EM ++P+ VTY L+ + + AL
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L +MV +G DL+ YT L+ G+ +EAE+ + +L+ + + V L +
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 574 CKLEEPVKAFNLFQDWLE 591
CK + A + LE
Sbjct: 375 CKAGDLSSAEFIITQMLE 392
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 26/339 (7%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+G E ++L M G P + + N +V LC+ G ME+A ++ +M+ PNL
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH-ILNQMMLMEIHPNLT 644
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY + D + ++ GI+ +R N L+ LC+ G K+A ++ +
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGD- 703
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ IPD VT M YF +A S ++ M + + +V YN +I GL L
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ + EM +G+ PD FTYN LI K G + + I M G+VP +Y V
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I +++A+ELL M + P + +I G C K
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS--GLC--------------KLC 867
Query: 454 VHPNV-FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
HP+V + A+ LA K LKE + KG P
Sbjct: 868 THPDVEWNKKAMYLAEAKG-------LLKEMVEEKGYIP 899
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
+P+ + I FD D+ K ++ L ++ + LY C+ + A
Sbjct: 30 IPESEETSLSITQRRFDPDLAPIKTRVYVSL----------FHTLFRLYLSCERLYGAAR 79
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL-KEEMLTKGLFPDVVTYNLLIGAA 503
T M FGV P+ +N+LI +G ++ SL +M+ G+ PDV N+LI +
Sbjct: 80 TLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSF 139
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
C + FA+ L R V D ++Y ++ C G EA + ++++K G++ D
Sbjct: 140 CKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDT 196
Query: 564 VPVQILFNMYCKLEEPVKAFNLFQDWLE 591
V L + +CK+ V+A L + E
Sbjct: 197 VSYNTLIDGFCKVGNFVRAKALVDEISE 224
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 31/507 (6%)
Query: 47 DIIEHASFCGRICWEEDM----------GLSSTN-YLMSAIGRNCQLNSKDCSSYDMSSG 95
DI+ H + GR+ EE + G+S + +L I C+ N++ +++D+ S
Sbjct: 226 DIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK-NARANAAWDILSD 284
Query: 96 HEKGQHAV----FNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLL 151
K + + FNAL + L +++ +M + + ++ +R + L
Sbjct: 285 LMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRP-----DVVTLGILINTL 339
Query: 152 CLEGKLEAAIRLQRIMVQKG------FLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
C +++ A+ + M K D N +++GLCKVG +++A + LVR LE
Sbjct: 340 CKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
PN VTYN LI GYC ++ A + S M + I+PN VT N +V +C + L
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE-MRQNSMEVDVVAYNVL 324
A ++ + + + V + + + H + ++ W E M + D Y L
Sbjct: 460 AVVFFMDM--EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I+GLC+ + + A ++ + G D YN+LIG + T + +L M K G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI- 443
PD I+Y +I +D + ++ M + + P + +ID Y ++ A+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
L +D+ L V+PN YN LI A K GN +A SLKEEM K + P+V TYN L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLIS 530
+ L+L EMV++ P+ I+
Sbjct: 698 NEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 189/412 (45%), Gaps = 46/412 (11%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM----ADTG--IQPNRVTCNI 252
LV +M E P++VT LI C VD+AL ++ M D G I+ + + N
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
L+ LC+ G LKEA+++L + +++ P+ VT +D Y + + A + + M+++
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++ +VV N ++ G+C++ +N+A + +M K+GV + TY LI A +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLC---FDRDIVRAKELL------------------ 411
Y M + G PD Y +I GLC D D +R E L
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 412 WCMLNNL--------------MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+C NN P I +N +I +G+ KD + + M + G+ P
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEM-LTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
V TY A+I A+ G + A L ++M L + P+ V YN+LI A L + AL L+
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
EM K RP++ +Y L + C+ N K E K++ + P QI
Sbjct: 676 EEMKMKMVRPNVETYNALFK--CL--NEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 17/410 (4%)
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPL--PNLVTYNTLI----KGYCTVNSVDKAL 232
N +V+ L + GL++ A L EML+ + PN +T + ++ KG +K +
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVL-DEMLQKESVFPPNRITADIVLHEVWKGRLLTE--EKII 244
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
L S + G+ PN V + +LC+N A +L +++ + + + +
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPL-EAPPFNALLSC 303
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG---- 348
+N + + L +M + + DVV +LIN LCK++ ++ A +M K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 349 --VLPDAFTYNILIGALWKEGKTREACYILGVMS-KMGIVPDEISYKVMIRGLCFDRDIV 405
+ D+ +N LI L K G+ +EA +L M + P+ ++Y +I G C +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
AKE++ M + + P + N I+ R ++ A++ M K GV NV TY LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
A N+ +A E+ML G PD Y LI C +R A+++ ++ + G
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
DL++Y L+ C + NT++ E + K G D + L + + K
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 188/441 (42%), Gaps = 19/441 (4%)
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+RL I +K V N ++ ++G++ ++ LV E L+ + N N ++
Sbjct: 137 LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQS--VLVYERLD-SNMKNSQVRNVVVD 193
Query: 221 GYCTVNSVDKALYLYSSM--ADTGIQPNRVTCNILVHALCENGHLKEAKKM-LEEILNDD 277
VD A + M ++ PNR+T +I++H + + L E K + L +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSH 253
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P+ V T F+ KN A+ + +++ +N ++ +N L++ L +N ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG---------IVPDE 388
+M + + PD T ILI L K + EA L V KM I D
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEA---LEVFEKMRGKRTDDGNVIKADS 370
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCM-LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
I + +I GLC + A+ELL M L P + +N +ID Y R + A
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M + + PNV T N ++ + + A +M +G+ +VVTY LI A C++
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
+ + A+ +M++ G PD Y L+ C +A K+ + G D +
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 568 ILFNMYCKLEEPVKAFNLFQD 588
+L ++C K + + D
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTD 571
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 129 KIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK 188
K G++G Y HA C +E A+ M++ G PD + +++GLC+
Sbjct: 469 KEGVKGNVVTYMTLIHAC-----CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 189 VGLMEKAHDWL--VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
V + HD + V ++ E G +L+ YN LI +C N+ +K + + M G +P+
Sbjct: 524 V---RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
+T N L+ ++ + ++M+E++ D D P + T +D Y E +A L+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLD-PTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 307 NEMRQNS-MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK 365
+M +S + + V YN+LIN K A EM K V P+ TYN L L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 366 EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ + ++ M + P++I+ ++++ L ++V+ ++ +
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 99 GQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLE 158
G+H F +++ M++ MRE+ + + T + A + C G+L+
Sbjct: 592 GKHKDFESVERMME-------QMRED-----------GLDPTVTTYGAVIDAYCSVGELD 633
Query: 159 AAIRLQRIM-VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
A++L + M + P+ +N ++N K+G +A L EM PN+ TYN
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNA 692
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
L K + L L M + +PN++T IL+ L + L + +K ++
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL-PNLV 213
G +E R+ R+M ++G +V T+ ++ G CK GLME+A V E+L+ L +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH--VFELLKEKKLVADQH 332
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y L+ GYC + A+ ++ +M + G++ N CN L++ C++G L EA+++
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR- 391
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ND PD T +D Y + +A L ++M Q + V+ YN+L+ G +
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ MLK+GV D + + L+ AL+K G EA + + G++ D I+ V
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
MI GLC + AKE+L +N ++++ RCK
Sbjct: 512 MISGLCKMEKVNEAKEIL----DN------------VNIF-RCK---------------- 538
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P V TY AL + K GN+ A+++KE M KG+FP + YN LI A R +
Sbjct: 539 --PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
L E+ +G P + +Y L+ C G +A ++++ G+
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 213/473 (45%), Gaps = 52/473 (10%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV--REMLEFGPL 209
C G ++ A++L M QK +P V T+N ++ G ++G HD L + ML+ G
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF---HDVLSLWKMMLKRGVN 468
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
+ ++ +TL++ + ++A+ L+ ++ G+ + +T N+++ LC+ + EAK++
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 270 LE----------------------------------EILNDDKDIPDLVTSTVFMDHYFK 295
L+ E + P + + FK
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
R + L E+R + V Y LI G C +++ AY EM++KG+ +
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIV-PDEISYKVMIRG---LCFDRDIVRAKELL 411
+ + +L++ K EAC +L + ++ P S K + C + A+ +
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI-AESVE 707
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA-ILTRDLMLKFGVHPNVFTYNALILAHVK 470
L+VP IV+N+ I + + +A L DL+ P+ +TY LI
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI 767
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+G+I +A++L++EM KG+ P++VTYN LI C L + D A +L ++ QKG P+ I+
Sbjct: 768 AGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 827
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDH-------VPVQILFNMYCKL 576
Y L+ GN EA K+++ GL+ +P +++ + KL
Sbjct: 828 YNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLDPEVKL 880
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 210/518 (40%), Gaps = 84/518 (16%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G++ A+R+ M++ G + N ++NG CK G + +A R M ++ P+
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR-MNDWSLKPD 400
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA----K 267
TYNTL+ GYC VD+AL L M + P +T NIL+ G + K
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
ML+ +N D+ ++ + ++ FK +F +A LW + + D + NV+I+G
Sbjct: 461 MMLKRGVNADE-----ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 328 LCKNQLMN-----------------------LAYGY----------ACE--MLKKGVLPD 352
LCK + +N L++GY A + M +KG+ P
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPT 575
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
YN LI +K + ++ + G+ P +Y +I G C I +A +
Sbjct: 576 IEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCF 635
Query: 413 CMLNN--------------------------LMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
M+ L++ K + ++L++ Y K+ A T
Sbjct: 636 EMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATT 695
Query: 447 DLML------------KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF-PDV 493
L K + PN YN I K+G + A L ++L+ F PD
Sbjct: 696 CLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
TY +LI + A LR EM KG P++++Y L++ C GN A+ K
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ + G+ + + L + K +A L + +E
Sbjct: 816 LPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 227/496 (45%), Gaps = 26/496 (5%)
Query: 56 GRICWEEDMGLSSTNYLMSAIGRNCQLNSKDC-SSYDMSSGHEKGQHAVFNALDNMLKGS 114
GR D+ L ++ L+++I R +LN + C ++++S +K + + A M+
Sbjct: 56 GRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPD-YKAYCKMVH-I 113
Query: 115 LERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP 174
L R + ++ + Y CE H+ V + G+L R+ + F P
Sbjct: 114 LSRARNYQQT--------KSYLCELVALNHSGFV----VWGEL------VRVFKEFSFSP 155
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
VF + I+ + GL++ A + M +G +P+L++ N+L+ AL++
Sbjct: 156 TVF--DMILKVYAEKGLVKNALH-VFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHV 212
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
Y M + P+ TC+I+V+A C +G++ +A +E + ++VT ++ Y
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK-KGVLPDA 353
+ + M + + +VV Y LI G CK LM A + E+LK K ++ D
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA-EHVFELLKEKKLVADQ 331
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
Y +L+ + G+ R+A + M ++G+ + +I G C +V A+++
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
M + + P +N ++D Y R V A+ D M + V P V TYN L+ + + G
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ SL + ML +G+ D ++ + L+ A L + A++L ++ +G D I+
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 534 LVRESCIRGNTKEAEE 549
++ C EA+E
Sbjct: 512 MISGLCKMEKVNEAKE 527
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 36/205 (17%)
Query: 423 PIVWNLIIDLYGRCKDVSN-----------------------------------AILTRD 447
P V+++I+ +Y V N A+ D
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL-KEEMLTKGLFPDVVTYNLLIGAACNL 506
M+ F V P+VFT + ++ A+ +SGN+ +A KE + GL +VVTYN LI +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
+ ++ R M ++G ++++YT L++ C +G +EAE + + + L+ D
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 567 QILFNMYCKLEEPVKAFNLFQDWLE 591
+L + YC+ + A + + +E
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIE 359
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 178/373 (47%), Gaps = 6/373 (1%)
Query: 153 LEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNL 212
L G+ E+++R+ + G V + N ++N L + + H FG PN+
Sbjct: 132 LAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNI 191
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
T N L+K C N ++ A + + G+ PN VT ++ G ++ AK++LEE
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+L D PD T TV MD Y K F +A ++ ++M +N +E + V Y V+I LCK +
Sbjct: 252 ML-DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
A EML++ +PD+ +I AL ++ K EAC + M K +PD
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLML 450
+I LC + + A++ L+ +P + +N +I G C+ +++ A D M
Sbjct: 371 TLIHWLCKEGRVTEARK-LFDEFEKGSIPSLLTYNTLI--AGMCEKGELTEAGRLWDDMY 427
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
+ PN FTYN LI K+GN+ + EEML G FP+ T+ +L L +
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 511 FALQLRREMVQKG 523
A+++ V G
Sbjct: 488 DAMKIVSMAVMNG 500
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 1/359 (0%)
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
L++ Y + ++ ++ + D G++ + + N L++ L +N M +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P++ T + + K + A+ + +E+ + ++V Y ++ G M A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
EML +G PDA TY +L+ K G+ EA ++ M K I P+E++Y VMIR
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
LC ++ A+ + ML +P + +ID V A MLK P+
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ LI K G + A L +E KG P ++TYN LI C A +L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
+M ++ +P+ +Y L+ GN KE ++L+ G + ILF KL
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 9/392 (2%)
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKAL--YLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
P P + L+ ++D AL +LY+ + G N T + ++ L
Sbjct: 42 PWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDP 101
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMD---HYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+ ++ ++ N I +F+D +Y + + ++ + ++ V + N
Sbjct: 102 VESLMADLRNSYPPIK--CGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLN 159
Query: 323 VLINGLCKNQLMNLAYG-YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
L+N L +NQ +L + + G+ P+ FT N+L+ AL K+ A +L +
Sbjct: 160 TLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPS 219
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
MG+VP+ ++Y ++ G D+ AK +L ML+ P + +++D Y + S
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A D M K + PN TY +I A K A ++ +EML + PD +I
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
A C D A L R+M++ PD + L+ C G EA + + + K G +
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIP 398
Query: 562 DHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
+ L C+ E +A L+ D E K
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC + K++ A L R M++ +PD + +++ LCK G + +A + E G +P
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF--DEFEKGSIP 398
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+L+TYNTLI G C + +A L+ M + +PN T N+L+ L +NG++KE ++L
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 271 EEIL 274
EE+L
Sbjct: 459 EEML 462
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG-LMEKAHDWLVREM 203
+ + LC EG++ A +L +KG +P + T+N ++ G+C+ G L E W +M
Sbjct: 370 STLIHWLCKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW--DDM 426
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
E PN TYN LI+G +V + + + M + G PN+ T IL L + G
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 264 KEAKKML 270
++A K++
Sbjct: 487 EDAMKIV 493
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 208/465 (44%), Gaps = 39/465 (8%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
A+++ MV GF P + T+N +++ + G++++A + L +M E G P++ TY TL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME-LKNQMAEKGTKPDVFTYTTLL 391
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
G+ V+ A+ ++ M + G +PN T N + G E K+ +EI N
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI-NVCGL 450
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
PD+VT + + +N + ++ EM++ + +N LI+ + A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
ML GV PD TYN ++ AL + G ++ +L M P+E++Y ++
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVW--------------------------------- 426
++I L + + ++ P+ ++
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 427 --NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
N ++ +YGR + V+ A D M + G P++ TYN+L+ H +S + ++ + E+
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 485 LTKGLFPDVVTYNLLIGAAC-NLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
L KG+ PD+++YN +I A C N R D A ++ EM G PD+I+Y +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRD-ASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+EA ++K G + + + YCKL +A +D
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 196/426 (46%), Gaps = 25/426 (5%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
A + +L EG++ +A + + + GF DV+++ +++ G +A + + ++M
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN-VFKKME 235
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSV-DKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
E G P L+TYN ++ + + + +K L M GI P+ T N L+ C+ G L
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL 294
Query: 264 -KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+EA ++ EE+ D VT +D Y K+ +A + NEM N +V YN
Sbjct: 295 HQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
LI+ ++ +++ A +M +KG PD FTY L+ + GK A I M
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 383 GIVPDEISYKVMI-----RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
G P+ ++ I RG F + E+ C L+ P + WN ++ ++G+
Sbjct: 414 GCKPNICTFNAFIKMYGNRGK-FTEMMKIFDEINVCGLS----PDIVTWNTLLAVFGQNG 468
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
S M + G P T+N LI A+ + G+ +A ++ ML G+ PD+ TYN
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE-------AEER 550
++ A + + ++ EM +P+ ++Y L+ N KE AEE
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH---AYANGKEIGLMHSLAEEV 585
Query: 551 YAKILK 556
Y+ +++
Sbjct: 586 YSGVIE 591
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 200/480 (41%), Gaps = 76/480 (15%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY---- 222
M G PD +T+N ++ CK G + + + EM G + VTYN L+ Y
Sbjct: 270 MKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 223 ---------------------CTVNS----------VDKALYLYSSMADTGIQPNRVTCN 251
T NS +D+A+ L + MA+ G +P+ T
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L+ G ++ A + EE+ N P++ T F+ Y +F + +++E+
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCK-PNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+ D+V +N L+ +N + + G EM + G +P+ T+N LI A + G +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A + M G+ PD +Y ++ L +++++L M + P + + ++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 432 LYGRCKDV-----------SNAILTRDLMLKF------------------------GVHP 456
Y K++ S I R ++LK G P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF--ALQ 514
++ T N+++ + + + +A + + M +G P + TYN L+ + RS DF + +
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM--YMHSRSADFGKSEE 685
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
+ RE++ KG +PD+ISY ++ C ++A ++++ SG++ D + Y
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 194/457 (42%), Gaps = 9/457 (1%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
YSYT + + G+ A+ + + M + G P + T+N I+N K+G
Sbjct: 209 YSYT---SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSV-DKALYLYSSMADTGIQPNRVTCNILVHAL 257
LV +M G P+ TYNTLI C S+ +A ++ M G ++VT N L+
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 258 CENGHLKEAKKMLEE-ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
++ KEA K+L E +LN P +VT + Y ++ +A L N+M + +
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFS--PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
DV Y L++G + + A EM G P+ T+N I GK E I
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
++ G+ PD +++ ++ + + M VP+ +N +I Y RC
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
A+ ML GV P++ TYN ++ A + G ++ + EM P+ +TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
L+ A N + L E+ P + LV EAE ++++ +
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
G D + + ++Y + + KA N D+++ +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKA-NGVLDYMKER 658
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 162/363 (44%), Gaps = 16/363 (4%)
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
Y SM D + I++ L + G + A M + D + D+ + T + +
Sbjct: 167 YQSMLDNSV------VAIIISMLGKEGRVSSAANMFNGLQEDGFSL-DVYSYTSLISAFA 219
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN-----GLCKNQLMNLAYGYACEMLKKGV 349
+ + +A +++ +M ++ + ++ YNV++N G N++ +L +M G+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE----KMKSDGI 275
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
PDA+TYN LI + +EA + M G D+++Y ++ A +
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+L M+ N P + +N +I Y R + A+ ++ M + G P+VFTY L+
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
++G + A S+ EEM G P++ T+N I N +++ E+ G PD++
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
++ L+ G E + ++ ++G + + L + Y + +A +++
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 590 LES 592
L++
Sbjct: 516 LDA 518
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 157/376 (41%), Gaps = 3/376 (0%)
Query: 188 KVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
K L +A DW +++ L N V +I V A +++ + + G +
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVV-AIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK-NREFIQAFSLW 306
+ L+ A +G +EA + ++ + +D P L+T V ++ + K + + SL
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKK-MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
+M+ + + D YN LI + L A EM G D TYN L+ K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
+ +EA +L M G P ++Y +I D + A EL M P +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
++ + R V +A+ + M G PN+ T+NA I + G + +E+
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE 546
GL PD+VT+N L+ + +EM + G P+ ++ L+ G+ ++
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 547 AEERYAKILKSGLMND 562
A Y ++L +G+ D
Sbjct: 508 AMTVYRRMLDAGVTPD 523
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 131 GLRGYACEYSYTEHAATVRLL----CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
G+ Y E +T AT L + + R ++ KG PD+ ++N ++
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
C+ M A + EM G +P+++TYNT I Y + ++A+ + M G +PN
Sbjct: 710 CRNTRMRDA-SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP 281
+ T N +V C+ EAK +E++ N D P
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 173/358 (48%), Gaps = 4/358 (1%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D N +++GLCKVG +++A + LVR LE +PN VTYN LI GYC ++ A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
S M + I+PN VT N +V +C + L A ++ + + + V + + + H
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM--EKEGVKGNVVTYMTLIHAC 486
Query: 295 KNREFIQAFSLWNE-MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
+ ++ W E M + D Y LI+GLC+ + + A ++ + G D
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
YN+LIG + + +L M K G PD I+Y +I +D + ++
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M + + P + +ID Y ++ A+ L +D+ L V+PN YN LI A K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
N +A SLKEEM K + P+V TYN L + L+L EMV++ P+ I+
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 46/412 (11%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM----ADTG--IQPNRVTCNI 252
LV +M E P++VT LI C VD+AL ++ M D G I+ + + N
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
L+ LC+ G LKEA+++L + +++ +P+ VT +D Y + + A + + M+++
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++ +VV N ++ G+C++ +N+A + +M K+GV + TY LI A +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLC---FDRDIVRAKELL------------------ 411
Y M + G PD Y +I GLC D D +R E L
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 412 WCMLNNL--------------MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+C NN P I +N +I +G+ KD + + M + G+ P
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEM-LTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
V TY A+I A+ G + A L ++M L + P+ V YN+LI A L + AL L+
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
EM K RP++ +Y L + C+ N K E K++ + P QI
Sbjct: 676 EEMKMKMVRPNVETYNALFK--CL--NEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 13/408 (3%)
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPL--PNLVTYNTLIKGYCTVN--SVDKALYL 234
N +V+ L + GL++ A L EML+ + PN +T + ++ + +K + L
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVL-DEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL 246
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
S + G+ PN V + +LC+N A +L +++ + + + +
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPL-EAPPFNALLSCLG 305
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG------ 348
+N + + L +M + + DVV +LIN LCK++ ++ A +M K
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMS-KMGIVPDEISYKVMIRGLCFDRDIVRA 407
+ D+ +N LI L K G+ +EA +L M + VP+ ++Y +I G C + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
KE++ M + + P + N I+ R ++ A++ M K GV NV TY LI A
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
N+ +A E+ML G PD Y LI C +R A+++ ++ + G D
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
L++Y L+ C + N ++ E + K G D + L + + K
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 188/438 (42%), Gaps = 13/438 (2%)
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+RL I +K + ++ ++G++ ++ LV E L+ + N N ++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQS--VLVYERLD-SNMKNSQVRNVVVD 193
Query: 221 GYCTVNSVDKALYLYSSM--ADTGIQPNRVTCNILVHALCENGHLKEAKKM-LEEILNDD 277
VD A + M ++ PNR+T +I++H + + L E K + L +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P+ V T F+ KN A+ + +++ +N ++ +N L++ L +N ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL----GVMSKMG--IVPDEISY 391
+M + + PD T ILI L K + EA + G + G I D I +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 392 KVMIRGLCFDRDIVRAKELLWCM-LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
+I GLC + A+ELL M L VP + +N +ID Y R + A M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
+ + PNV T N ++ + + A +M +G+ +VVTY LI A C++ + +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A+ +M++ G PD Y L+ C +A K+ + G D + +L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 571 NMYCKLEEPVKAFNLFQD 588
++C K + + D
Sbjct: 554 GLFCDKNNAEKVYEMLTD 571
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 129 KIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK 188
K G++G Y HA C +E A+ M++ G PD + +++GLC+
Sbjct: 469 KEGVKGNVVTYMTLIHAC-----CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 189 VGLMEKAHDWL--VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
V + HD + V ++ E G +L+ YN LI +C N+ +K + + M G +P+
Sbjct: 524 V---RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
+T N L+ ++ + ++M+E++ D D P + T +D Y E +A L+
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLD-PTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 307 NEMRQNS-MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK 365
+M +S + + V YN+LIN K A EM K V P+ TYN L L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 366 EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ + ++ M + P++I+ ++++ L ++V+ ++ +
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 99 GQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLE 158
G+H F +++ M++ MRE+ GL + + T + A + C G+L+
Sbjct: 592 GKHKDFESVERMME-------QMRED------GL-----DPTVTTYGAVIDAYCSVGELD 633
Query: 159 AAIRLQRIM-VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
A++L + M + P+ +N ++N K+G +A L EM PN+ TYN
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNA 692
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
L K + L L M + +PN++T IL+ L + L + +K ++
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 221/488 (45%), Gaps = 39/488 (7%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C S + + + +G ++ AIRL+ M+ G +V ++ G CK + A
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
L +M + GP PN VT++ LI+ + ++KAL Y M G+ P+ + ++
Sbjct: 360 -VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
+ +EA K+ +E + + ++ + K + +A L ++M +
Sbjct: 419 WLKGQKHEEALKLFDESF--ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
+VV+YN ++ G C+ + M+LA +L+KG+ P+ +TY+ILI ++ + A ++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML-NNLMVPKPIVWNLIIDLYGR 435
M+ I + + Y+ +I GLC +A+ELL M+ + + +N IID + +
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYN--------------------------------- 462
++ +A+ + M G+ PNV TY
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 463 --ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
ALI K N+ A +L E+L +GL P YN LI NL + AL L ++M+
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
+ G R DL +YT L+ GN A E Y ++ GL+ D + ++ N K + V
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 581 KAFNLFQD 588
K +F++
Sbjct: 777 KVVKMFEE 784
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 215/451 (47%), Gaps = 19/451 (4%)
Query: 144 HAATVRLLCLEG-KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
H T+ L+G K E A++L + G L +VF N I++ LCK G ++A + L+ +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATE-LLSK 468
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M G PN+V+YN ++ G+C ++D A ++S++ + G++PN T +IL+ N
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVF-----MDHYFKNREFIQAFSLWNEMRQNSMEVD 317
+ A +++ + + + ++ +V T+ + K RE L N + + + V
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL-----LANMIEEKRLCVS 583
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
++YN +I+G K M+ A EM G+ P+ TY L+ L K + +A +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M G+ D +Y +I G C ++ A L +L + P ++N +I + +
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF---R 700
Query: 438 DVSNAILTRDL---MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
++ N + DL MLK G+ ++ TY LI +K GN+ A L EM GL PD +
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
Y +++ +++ EM + P+++ Y ++ GN EA + ++
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
L G++ D IL + +PV+A +L
Sbjct: 821 LDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 186/426 (43%), Gaps = 6/426 (1%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
GF + N+++N K + A D +V +MLE +P N + NS+ +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVD-IVNQMLELDVIPFFPYVNRTLSALVQRNSLTE 216
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A LYS M G+ + VT +L+ A EA ++L + + PD + ++ +
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE-PDSLLYSLAV 275
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVV-AYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
K + A SL EM++ + V Y +I K M+ A EML G+
Sbjct: 276 QACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGI 335
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
+ LI K A + M K G P+ +++ V+I + ++ +A E
Sbjct: 336 SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE 395
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
M + P + II + + + A+ D + G+ NVF N ++
Sbjct: 396 FYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLC 454
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K G A L +M ++G+ P+VV+YN ++ C ++ D A + +++KG +P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 530 SYTELVRESCIRGNTKE-AEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+Y+ L+ + C R + ++ A E + S + + V Q + N CK+ + KA L +
Sbjct: 515 TYSILI-DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 589 WLESKR 594
+E KR
Sbjct: 574 MIEEKR 579
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 200/446 (44%), Gaps = 10/446 (2%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
VR+L E + A +L + + +L DV + I++ + G EKA D L M E G
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID-LFERMKEMG 240
Query: 208 PLPNLVTYNTLIKGYCTVN-SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
P P LVTYN ++ + + S K L + M G++ + TC+ ++ A G L+EA
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
K+ E+ + + P VT + + K + +A S+ EM +NS D V YN L+
Sbjct: 301 KEFFAELKSCGYE-PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
+ A G M KKGV+P+A TY +I A K GK EA + M + G VP
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG-RCKDVSNAILT 445
+ +Y ++ L ++L M +N P WN ++ L G + D +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
R+ M G P+ T+N LI A+ + G+ A + EM G V TYN L+ A
Sbjct: 480 RE-MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH-- 563
+ +M KG +P SY+ L+ + +G ER +K G +
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYS-LMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 564 -VPVQILFNMYCK-LEEPVKAFNLFQ 587
+ +L N C+ L +AF LF+
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFK 623
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 211/493 (42%), Gaps = 65/493 (13%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
L+ E + A +++ G A+ + + M + D T+N +V + G
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
++A ++ M + G +PN +TY T+I Y D+AL L+ SM + G PN T N
Sbjct: 367 SKEAAG-VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF-------MDHYFKNREFIQAFS 304
++ L + E KML ++ ++ +T+ MD F NR F
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK-FVNRVF----- 479
Query: 305 LWNEMRQNSMEVDVVAYNVLIN--GLCKNQL-MNLAYGYACEMLKKGVLPDAFTYNILIG 361
EM+ E D +N LI+ G C +++ + YG EM + G TYN L+
Sbjct: 480 --REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG---EMTRAGFNACVTTYNALLN 534
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG-------LCFDRDIVRAKE----L 410
AL ++G R ++ M G P E SY +M++ L +R R KE
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 411 LWCMLNNLMV------------------------PKPIVWNLIIDLYGRCKDVSNAILTR 446
W +L L++ P +++N ++ ++ R A
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 654
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ + + G+ P++ TYN+L+ +V+ G ++A + + + L PD+V+YN +I C
Sbjct: 655 ESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRR 714
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
A+++ EM ++G RP + +Y V G E E+ +++ ND P
Sbjct: 715 GLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED----VIECMAKNDCRPN 770
Query: 567 QILFNM----YCK 575
++ F M YC+
Sbjct: 771 ELTFKMVVDGYCR 783
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 157/380 (41%), Gaps = 18/380 (4%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ A + LL + + I++ M G P+ T N ++ LC M+K + + REM
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREM 482
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
G P+ T+NTLI Y S A +Y M G T N L++AL G
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 264 KEAKKMLEEILNDDKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
+ E +++D K P + ++ + Y K ++ + N +++ + +
Sbjct: 543 RSG----ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
L+ K + + + K G PD +N ++ + +A IL +
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 381 KMGIVPDEISYKVMI-----RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
+ G+ PD ++Y ++ RG C+ +A+E+L + + + P + +N +I + R
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
+ A+ M + G+ P +FTYN + + G + E M P+ +T
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Query: 496 YNLLIGAACNLRSHDFALQL 515
+ +++ C + A+
Sbjct: 774 FKMVVDGYCRAGKYSEAMDF 793
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 8/289 (2%)
Query: 253 LVHALCENGHLKEAKKMLEEIL---NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM 309
LV L ++GH + A + E ++ N D +F+ + ++ A L +++
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKI 201
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
+DV AY +++ + A M + G P TYN+++ K G++
Sbjct: 202 PLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS 261
Query: 370 REACYILGVMSKM---GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
ILGV+ +M G+ DE + ++ + + AKE + + P + +
Sbjct: 262 WRK--ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
N ++ ++G+ + A+ M + + TYN L+ A+V++G A + E M
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
KG+ P+ +TY +I A D AL+L M + G P+ +Y ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD+ ++N ++ G C+ GLM++A ++ EM E G P + TYNT + GY + +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVR-MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN-----DDKDIPDLV 284
+ MA +PN +T ++V C G EA + +I DD+ I L
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLA 813
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 419 MVPKP--IVWNLIIDLYGRCKDVSNAIL-TRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
M P P + +N+I+D++G+ IL D M G+ + FT + ++ A + G +
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLR 298
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
A E+ + G P VTYN L+ + AL + +EM + D ++Y ELV
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
G +KEA + K G+M + + + + Y K + +A LF E+
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 14/394 (3%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG----PLPNLVTYNTLIKGYCTVN 226
G P T ++ + G M+ A + L EM+ P N V + +I G+C +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVL--EMMTNKNVNYPFDNFVC-SAVISGFCKIG 185
Query: 227 SVDKALYLYSSMADTGI-QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
+ AL + S D+G+ PN VT LV ALC+ G + E + ++ L D+ D V
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR-LEDEGFEFDCVF 244
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ ++ YFK + A EM + M DVV+Y++LI+GL K + A G +M+
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
K+GV P+ TY +I L K GK EA + + +GI DE Y +I G+C ++
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
RA +L M + P + +N +I+ G C ++ + D + K GV +V TY+ L+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVIN--GLC--MAGRVSEADEVSK-GVVGDVITYSTLL 419
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
+++K NI ++ L + D+V N+L+ A + ++ A L R M +
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
PD +Y +++ C G +EA E + ++ KS +
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 209/481 (43%), Gaps = 57/481 (11%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C +G L A + M Q+G P + T+N ++NGLC G + +A + + G +
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE------VSKGVVG 410
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+++TY+TL+ Y V ++D L + + I + V CNIL+ A G EA +
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ D PD T + Y K + +A ++NE+R++S+ V YN +I+ LCK
Sbjct: 471 RAMPEMDL-TPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCK 528
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK--------- 381
+++ A E+ +KG+ D T L+ ++ G + ILG++
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG---ILGLVYGLEQLNSDVC 585
Query: 382 MGIVPDEI-------SYKVMIRGLCFDR----DIVRAKELLWCMLNNL------------ 418
+G++ D I S++ I R + +L +++NL
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNA 645
Query: 419 ---MVPKPIVWNLIIDLYGRCKDVSNAILTRDLML-----KFGVHPNVFTYNALILAHVK 470
+ V + I + G CK+ L + L L GV N TYN+LI +
Sbjct: 646 GETTLSSMDVIDYTIIINGLCKE---GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
G + A L + + GL P VTY +LI C A +L MV KG P++I
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK---LEEPVKAFNLFQ 587
Y +V C G T++A ++ + + D V + YCK +EE + F F+
Sbjct: 763 YNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Query: 588 D 588
D
Sbjct: 823 D 823
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 187/435 (42%), Gaps = 47/435 (10%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
++ L G A L R M + PD T+ ++ G CK G +E+A + L
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF--NELRKS 511
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+ V YN +I C +D A + + + G+ + T L+H++ NG K
Sbjct: 512 SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571
Query: 268 KMLE--EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV--------- 316
++ E LN D + L + + + K F A ++ MR+ + V
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLL---CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKT 628
Query: 317 -------------------------DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
DV+ Y ++INGLCK + A +GV
Sbjct: 629 LVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTL 688
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ TYN LI L ++G EA + + +G+VP E++Y ++I LC + + A++LL
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA--ILTRDLMLKFGVHPNVFTYNALILAHV 469
M++ +VP I++N I+D Y + +A +++R +M + V P+ FT +++I +
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR--VTPDAFTVSSMIKGYC 806
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K G++ A S+ E K + D + LI C + A L REM+ LI
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866
Query: 530 SY--TELVRESCIRG 542
+ EL IRG
Sbjct: 867 NRVDAELAESESIRG 881
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 168/393 (42%), Gaps = 59/393 (15%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA--HDWLVR 201
+ V LC GK++ L R + +GF D +++ ++G K G + A D R
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD---R 266
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
EM+E G ++V+Y+ LI G +V++AL L M G++PN +T ++ LC+ G
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
L+E AF L+N + +EVD Y
Sbjct: 327 KLEE------------------------------------AFVLFNRILSVGIEVDEFLY 350
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
LI+G+C+ +N A+ +M ++G+ P TYN +I L G+ EA +
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----S 405
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN------LIIDLYGR 435
G+V D I+Y ++ ++I E+ L + ++ N L++ YG
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
+ A+ DL P+ TY +I + K+G I A + E L K V
Sbjct: 466 ADALYRAMPEMDLT------PDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVC 518
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
YN +I A C D A ++ E+ +KG D+
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 195/441 (44%), Gaps = 12/441 (2%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++A + ++R ++ D+ N ++ +G +A D L R M E P+ TY
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA-DALYRAMPEMDLTPDTATYA 486
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
T+IKGYC +++AL +++ + + + V N ++ ALC+ G L A ++L E+
Sbjct: 487 TMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEK 545
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ D+ TS + N L + Q + +V + N I LCK
Sbjct: 546 GLYL-DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEA 604
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP--DEISYKVM 394
A M +KG L F IL L ++ +A Y+L V + + D I Y ++
Sbjct: 605 AIEVYMIMRRKG-LTVTFPSTIL-KTLVDNLRSLDA-YLLVVNAGETTLSSMDVIDYTII 661
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKF 452
I GLC + +V+A L + + I +N +I+ G C+ + A+ D +
Sbjct: 662 INGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN--GLCQQGCLVEALRLFDSLENI 719
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G+ P+ TY LI K G A L + M++KGL P+++ YN ++ C L + A
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
+++ + PD + + +++ C +G+ +EA + + + D L
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 573 YCKLEEPVKAFNLFQDWLESK 593
+C +A L ++ L S+
Sbjct: 840 FCTKGRMEEARGLLREMLVSE 860
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 198/480 (41%), Gaps = 59/480 (12%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L A+ R MV+KG DV +++ +++GL K G +E+A L+ +M++ G PNL+T
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL-GLLGKMIKEGVEPNLIT 314
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y +I+G C + +++A L++ + GI+ + L+ +C G+L A ML ++
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDME 374
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
L +TV R S +E+ + + DV+ Y+ L++ K Q +
Sbjct: 375 QRGIQPSILTYNTVINGLCMAGR-----VSEADEVSKGVVG-DVITYSTLLDSYIKVQNI 428
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ L+ + D NIL+ A G EA + M +M + PD +Y M
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK----DVSNAIL------ 444
I+G C I A E ++ L V + +N IID CK D + +L
Sbjct: 489 IKGYCKTGQIEEALE-MFNELRKSSVSAAVCYNRIID--ALCKKGMLDTATEVLIELWEK 545
Query: 445 --------TRDLMLKFGVHPN---------------------VFTYNALILAHVKSGNIY 475
+R L+ +H N + N IL K G+
Sbjct: 546 GLYLDIHTSRTLL--HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603
Query: 476 RAYSLKEEMLTKGL---FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
A + M KGL FP + L+ NLRS D L + D+I YT
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVD----NLRSLDAYLLVVNAGETTLSSMDVIDYT 659
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
++ C G +A + G+ + + L N C+ V+A LF D LE+
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF-DSLEN 718
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 143 EHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
++ + LC EG L A+ L +G + T+N ++NGLC+ G + +A L
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL-RLFDS 715
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
+ G +P+ VTY LI C A L SM G+ PN + N +V C+ G
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
++A +++ + + PD T + + Y K + +A S++ E + ++ D +
Sbjct: 776 TEDAMRVVSRKMM-GRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 323 VLINGLCKNQLMNLAYGYACEML 345
LI G C M A G EML
Sbjct: 835 FLIKGFCTKGRMEEARGLLREML 857
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI-VP-DEISYKVMIRGLCFDRDIV 405
G P + T+ LI ++G+ A +L +M+ + P D +I G C +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC----KI 184
Query: 406 RAKELLWCML-----NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF---GVHPN 457
EL + ++VP + + ++ + V RDL+ + G +
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV---RDLVRRLEDEGFEFD 241
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
Y+ I + K G + A EM+ KG+ DVV+Y++LI + + AL L
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
+M+++G P+LI+YT ++R C G +EA + +IL G+ D L + C+
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 578 EPVKAFNLFQD 588
+AF++ D
Sbjct: 362 NLNRAFSMLGD 372
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 157/423 (37%), Gaps = 112/423 (26%)
Query: 209 LPNLVTYNTLIKGYC-TVNSVDKALY-LYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
P ++LI G+ T + K L L + + G P+ +T L++ E G + A
Sbjct: 94 FPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNA 153
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++LE + N + + P D + +I+
Sbjct: 154 IEVLEMMTNKNVNYP----------------------------------FDNFVCSAVIS 179
Query: 327 GLCKNQLMNLAYGYACEMLKKGVL-PDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
G CK LA G+ + GVL P+ TY L+ AL + GK E ++ + G
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
D + Y I G Y + + +A++
Sbjct: 240 FDCVFYSNWIHG-----------------------------------YFKGGALVDALMQ 264
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC- 504
M++ G++ +V +Y+ LI K GN+ A L +M+ +G+ P+++TY +I C
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 505 -----------------NLRSHDF-----------------ALQLRREMVQKGHRPDLIS 530
+ +F A + +M Q+G +P +++
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
Y ++ C+ G EA+E + G++ D + L + Y K++ + + +L
Sbjct: 385 YNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 591 ESK 593
E+K
Sbjct: 440 EAK 442
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 186/410 (45%), Gaps = 6/410 (1%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+++ + + R MV G V++ +V GLC+ G +EK+ L++E G P TY
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKK-LIKEFSVKGIKPEAYTY 262
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
NT+I Y + M G+ N+VT +L+ +NG + +A+K+ +E+
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+ D+ T + + +AF L++E+ + + Y LI+G+CK M
Sbjct: 323 RGIE-SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM KGV +N LI ++G EA I VM + G D + +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI- 440
Query: 396 RGLCFDR--DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
CF+R AK+ L+ M+ + + + +ID+Y + +V A M G
Sbjct: 441 -ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
V PN TYN +I A+ K G I A L+ M G+ PD TY LI C + D A+
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
+L EM KG + ++YT ++ G + EA Y ++ + G D+
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 198/447 (44%), Gaps = 16/447 (3%)
Query: 149 RLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-------LVR 201
R+ G E +R+ MV+KG D + C V L+ + R
Sbjct: 162 RVYVDNGMFEEGLRVFDYMVKKGLSIDERS--------CIVFLVAAKKRRRIDLCLEIFR 213
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
M++ G + + +++G C V+K+ L + GI+P T N +++A +
Sbjct: 214 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
+ +L+ ++ D + + VT T+ M+ KN + A L++EMR+ +E DV Y
Sbjct: 274 DFSGVEGVLK-VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
LI+ C+ M A+ E+ +KG+ P ++TY LI + K G+ A ++ M
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
G+ ++ + +I G C + A + M N I + R K
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A M++ GV + +Y LI + K GN+ A L EM +KG+ P+ +TYN++I
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
A C A +LR M G PD +YT L+ CI N EA ++++ GL
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 562 DHVPVQILFNMYCKLEEPVKAFNLFQD 588
+ V ++ + K + +AF L+ +
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDE 599
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 175/388 (45%), Gaps = 2/388 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
V LC G++E + +L + KG P+ +T+N I+N K + +++ M + G
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV-EGVLKVMKKDG 289
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+ N VTY L++ + A L+ M + GI+ + L+ C G++K A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+ +E L + P T +D K E A L NEM+ + + V +N LI+G
Sbjct: 350 LLFDE-LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
C+ +++ A M +KG D FT N + + + EA L M + G+
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+SY +I C + ++ AK L M + + P I +N++I Y + + A R
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M G+ P+ +TY +LI + N+ A L EM KGL + VTY ++I
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELV 535
D A L EM +KG+ D YT L+
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 2/212 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G ++ A + +M QKGF DVFT N I + ++ ++A WL R M+E G +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR-MMEGGVKLS 468
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
V+Y LI YC +V++A L+ M+ G+QPN +T N++++A C+ G +KEA+K+
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ + D PD T T + +A L++EM ++ + V Y V+I+GL K
Sbjct: 529 NMEANGMD-PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+ A+G EM +KG D Y LIG++
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 172/402 (42%), Gaps = 44/402 (10%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D+ ++ NG+ + GL + D++V++ L +V + +D L +
Sbjct: 158 DLVFRVYVDNGMFEEGL--RVFDYMVKKGLSIDERSCIV----FLVAAKKRRRIDLCLEI 211
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHY 293
+ M D+G++ + I+V LC G ++++KK+++E K I P+ T ++ Y
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF--SVKGIKPEAYTYNTIINAY 269
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K R+F + M+++ + + V Y +L+ KN M+ A EM ++G+ D
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
Y LI ++G + A + +++ G+ P +Y +I G+C
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC-------------- 375
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
+ ++ A + + M GV+ +N LI + + G
Sbjct: 376 ---------------------KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ A + + M KG DV T N + L+ +D A Q M++ G + +SYT
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 534 LVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
L+ C GN +EA+ + ++ G+ + + ++ YCK
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 157/372 (42%), Gaps = 25/372 (6%)
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND---DKDIPDLVTSTVFMD----- 291
++ ++P+ L H L N E + +L ++ND + + +L ++ V D
Sbjct: 90 ESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEK 149
Query: 292 -------------HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
Y N F + +++ M + + +D + V + K + ++L
Sbjct: 150 FEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCL 209
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
M+ GV ++ I++ L + G+ ++ ++ S GI P+ +Y +I
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
RD + +L M + +V + + L+++L + +S+A D M + G+ +V
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
Y +LI + + GN+ RA+ L +E+ KGL P TY LI C + A L E
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 519 MVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEE 578
M KG + + L+ C +G EA Y + + G D + + + +L
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL-- 447
Query: 579 PVKAFNLFQDWL 590
K ++ + WL
Sbjct: 448 --KRYDEAKQWL 457
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 140 SYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL 199
S + + + C EG +E A RL M KG P+ T+N ++ CK G +++A L
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-L 526
Query: 200 VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
M G P+ TY +LI G C ++VD+A+ L+S M G+ N VT +++ L +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 260 NGHLKEAKKMLEEI 273
G EA + +E+
Sbjct: 587 AGKSDEAFGLYDEM 600
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 182/410 (44%), Gaps = 25/410 (6%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G + +++L + M Q G P V T N +++ L K G AHD +G P+ T
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+NTLI G+C + VD+A ++ M P+ VT N ++ LC G +K A +L +L
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 275 NDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D+ P++V+ T + Y +E +A ++++M ++ + V YN LI GL +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH- 330
Query: 334 MNLAYGYACEMLKKG------VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
Y ++L G PDA T+NILI A G A + M M + PD
Sbjct: 331 ---RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV-------PKPIVWNLIIDLY---GRCK 437
SY V+IR LC + RA+ L + ++ P +N + + G+ K
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
R LM K GV + +Y LI H + G AY L ML + PD+ TY
Sbjct: 448 QAEKVF--RQLM-KRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
LLI + A + M++ + P ++ ++ E R E+
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANES 553
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 201/455 (44%), Gaps = 23/455 (5%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL- 209
C ++ A R+ + M PDV T+N I++GLC+ G ++ AH+ L + + +
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PN+V+Y TL++GYC +D+A+ ++ M G++PN VT N L+ L E E K +
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 270 LEEILNDDKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
L I +D PD T + + + A ++ EM + D +Y+VLI
Sbjct: 339 L--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 327 GLCKNQLMNLAYGYACEMLKKGVL-------PDAFTYNILIGALWKEGKTREACYILGVM 379
LC + A E+ +K VL P A YN + L GKT++A + +
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
K G V D SYK +I G C + A ELL ML VP + L+ID G K +
Sbjct: 457 MKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID--GLLK-I 512
Query: 440 SNAILTRDL---MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
A+L D ML+ P T+++++ K ++ L ML K + ++
Sbjct: 513 GEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLS 572
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
++ + + A + R + G+ L+ EL+ C +A L+
Sbjct: 573 TQVVRLLFSSAQKEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLE 629
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
M D + CK + +AF+L+ + +E
Sbjct: 630 KSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVE 664
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 162/374 (43%), Gaps = 51/374 (13%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+N+LI+ Y +++ L+ +M GI P+ +T N L+ L + G A + +E+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
PD T ++ + KN +AF ++ +M DVV YN +I+GLC+ +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+A+ MLKK + P+ +SY +
Sbjct: 261 KIAHNVLSGMLKKAT---------------------------------DVHPNVVSYTTL 287
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID------LYGRCKDVSNAILTRDL 448
+RG C ++I A + ML+ + P + +N +I Y KD+ I D
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI--LIGGNDA 345
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
F P+ T+N LI AH +G++ A + +EML L PD +Y++LI C
Sbjct: 346 FTTFA--PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 509 HDFALQLRREMVQK----GH---RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
D A L E+ +K G +P +Y + C G TK+AE+ + +++K G+
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-Q 462
Query: 562 DHVPVQILFNMYCK 575
D + L +C+
Sbjct: 463 DPPSYKTLITGHCR 476
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 5/231 (2%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C EGK + A L +M+++ F+PD+ T+ +++GL K+G AHD L R ML LP
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR-MLRSSYLPV 533
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
T+++++ +++ L + M + I+ N +V L + KE ++
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQ-KEKAFLIV 592
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+L D+ LV + + +NR+ + A +L + S VD+ N +I GLCK+
Sbjct: 593 RLLYDNG---YLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKH 649
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+ + A+ E+++ G + +L AL GK E ++ M+ +
Sbjct: 650 KRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATL 700
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 194/414 (46%), Gaps = 2/414 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC GKL A +L +M + +P + +++V GL ++ ++KA ++R M+ G +P
Sbjct: 114 LCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAM-CILRVMVMSGGVP 172
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ +TYN +I C + AL L M+ +G P+ +T N ++ + + G+ ++A +
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW 232
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ L + P ++T TV ++ + +A + +M D+V YN L+N C+
Sbjct: 233 KDQLQNGCP-PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ +L G+ + TYN L+ +L E IL +M + P I+
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
Y ++I GLC R + RA + + ML +P + +N ++ + V +AI L+
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
P + TYN++I K G + +A L +ML G+FPD +T LI C +
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
A Q+ +E +G+ +Y +++ C + + A E +L G D
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 181/391 (46%), Gaps = 43/391 (10%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA------------ 195
VR L +L+ A+ + R+MV G +PD T+N I+ LCK G + A
Sbjct: 146 VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 196 ------HDWLVREMLEFGPL----------------PNLVTYNTLIKGYCTVNSVDKALY 233
++ ++R M ++G P ++TY L++ C +A+
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+ MA G P+ VT N LV+ C G+L+E +++ IL+ ++ + VT +
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL-NTVTYNTLLHSL 324
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
+ + + + N M Q S V+ YN+LINGLCK +L++ A + +ML++ LPD
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
TYN ++GA+ KEG +A +LG++ P I+Y +I GL + +A EL
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
ML+ + P I +I YG C+ + + +L G+ + TY +I
Sbjct: 445 MLDAGIFPDDITRRSLI--YGFCRANLVEEAGQVLKETSNRGNGIRGS--TYRLVIQGLC 500
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
K I A + E MLT G PD Y ++
Sbjct: 501 KKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 45/416 (10%)
Query: 87 CSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAA 146
C ++ + H + H F + N+++G L R+ + + + ++++ + + T +
Sbjct: 124 CKLVEVMARHNQVPH--FPSCSNLVRG-LARIDQLDKAMCILRVMVMSGGVPDTIT-YNM 179
Query: 147 TVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
+ LC +G + A+ L M G PDV T+N ++ + G E+A + ++ L+
Sbjct: 180 IIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW-KDQLQN 238
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G P ++TY L++ C +A+ + MA G P+ VT N LV+ C G+L+E
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+++ IL+ ++ + VT + + + + + N M Q S V+ YN+LIN
Sbjct: 299 ASVIQHILSHGLEL-NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
GLCK +L++ A + +ML++ LPD TYN ++GA+ KEG +A +LG++ P
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC---------- 436
I+Y +I GL + +A EL ML+ + P I +I YG C
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI--YGFCRANLVEEAGQ 475
Query: 437 ---------------------------KDVSNAILTRDLMLKFGVHPNVFTYNALI 465
K++ AI ++ML G P+ Y A++
Sbjct: 476 VLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 152/362 (41%), Gaps = 36/362 (9%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
T N ++H LC NG L +A K++ E++ +P + + + + + +A +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLV-EVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M + D + YN++I LCK + A +M G PD TYN +I ++ G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+A + G P I+Y V++ +C RA E+L M P + +N
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 429 IIDL---YGRCKDVSNAIL--------------------------------TRDLMLKFG 453
+++ G ++V++ I ++M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P V TYN LI K+ + RA +ML + PD+VTYN ++GA D A+
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+L + P LI+Y ++ +G K+A E Y ++L +G+ D + + L +
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 574 CK 575
C+
Sbjct: 465 CR 466
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%)
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
D T N ++ L GK +AC ++ VM++ VP S ++RGL + +A +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M+ + VP I +N+II + + A++ + M G P+V TYN +I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
GN +A ++ L G P ++TY +L+ C A+++ +M +G PD+++Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
LV +C RGN +E IL GL + V L + C E
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 9/264 (3%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMV 168
N +G+LE + + ++I + GL Y+ H+ LC + + IM
Sbjct: 289 NCRRGNLEEVASVIQHI--LSHGLELNTVTYNTLLHS-----LCSHEYWDEVEEILNIMY 341
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q + P V T+N ++NGLCK L+ +A D+ +MLE LP++VTYNT++ V
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFY-QMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
D A+ L + +T P +T N ++ L + G +K+A ++ ++L D PD +T
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML-DAGIFPDDITRRS 459
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+ + + +A + E + Y ++I GLCK + + +A ML G
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 349 VLPDAFTYNILIGALWKEGKTREA 372
PD Y ++ + + G EA
Sbjct: 520 CKPDETIYTAIVKGVEEMGMGSEA 543
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C + V L+C AI + M +G PD+ T+N +VN C+ G +E+
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+++ +L G N VTYNTL+ C+ D+ + + M T P +T NIL++
Sbjct: 299 AS-VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
LC+ L A ++L + K +PD+VT + K A L ++
Sbjct: 358 GLCKARLLSRAIDFFYQML-EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCP 416
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD----------------------- 352
++ YN +I+GL K LM A +ML G+ PD
Sbjct: 417 PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV 476
Query: 353 ------------AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
TY ++I L K+ + A ++ +M G PDE Y +++G+
Sbjct: 477 LKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%)
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
E D N +++ LC N + A M + +P + + L+ L + + +A
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
IL VM G VPD I+Y ++I LC I A LL M + P I +N +I
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
+ AI L+ G P + TY L+ + RA + E+M +G +PD+V
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
TYN L+ C + + + + ++ G + ++Y L+ C E EE +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
++ + IL N CK +A + F LE K
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 168/349 (48%), Gaps = 4/349 (1%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D N +++GLCKVG +++A + LVR LE +PN VTYN LI GYC ++ A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
S M + I+PN VT N +V +C + L A ++ + + + V + + + H
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM--EKEGVKGNVVTYMTLIHAC 486
Query: 295 KNREFIQAFSLWNE-MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
+ ++ W E M + D Y LI+GLC+ + + A ++ + G D
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
YN+LIG + + +L M K G PD I+Y +I +D + ++
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M + + P + +ID Y ++ A+ L +D+ L V+PN YN LI A K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
N +A SLKEEM K + P+V TYN L + L+L EMV+
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 192/412 (46%), Gaps = 48/412 (11%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM----ADTG--IQPNRVTCNI 252
LV +M E P++VT LI C VD+AL ++ M D G I+ + + N
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
L+ LC+ G LKEA+++L + +++ +P+ VT +D Y + + A + + M+++
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++ +VV N ++ G+C++ +N+A + +M K+GV + TY LI A +A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLC---FDRDIVRAKELL------------------ 411
Y M + G PD Y +I GLC D D +R E L
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 412 WCMLNNL--------------MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+C NN P I +N +I +G+ KD + + M + G+ P
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEM-LTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
V TY A+I A+ G + A L ++M L + P+ V YN+LI A L + AL L+
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
EM K RP++ +Y L + C+ N K E K++ M +H+ QI
Sbjct: 676 EEMKMKMVRPNVETYNALFK--CL--NEKTQGETLLKLMDE--MVEHLVNQI 721
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 13/408 (3%)
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPL--PNLVTYNTLIKGYCTVN--SVDKALYL 234
N +V+ L + GL++ A L EML+ + PN +T + ++ + +K + L
Sbjct: 188 RNVVVDVLLRNGLVDDAFKVL-DEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL 246
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
S + G+ PN V + +LC+N A +L +++ + + + +
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPL-EAPPFNALLSCLG 305
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG------ 348
+N + + L +M + + DVV +LIN LCK++ ++ A +M K
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMS-KMGIVPDEISYKVMIRGLCFDRDIVRA 407
+ D+ +N LI L K G+ +EA +L M + VP+ ++Y +I G C + A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
KE++ M + + P + N I+ R ++ A++ M K GV NV TY LI A
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
N+ +A E+ML G PD Y LI C +R A+++ ++ + G D
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
L++Y L+ C + N ++ E + K G D + L + + K
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 188/438 (42%), Gaps = 13/438 (2%)
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+RL I +K + ++ ++G++ ++ LV E L+ + N N ++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQS--VLVYERLD-SNMKNSQVRNVVVD 193
Query: 221 GYCTVNSVDKALYLYSSM--ADTGIQPNRVTCNILVHALCENGHLKEAKKM-LEEILNDD 277
VD A + M ++ PNR+T +I++H + + L E K + L +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P+ V T F+ KN A+ + +++ +N ++ +N L++ L +N ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL----GVMSKMG--IVPDEISY 391
+M + + PD T ILI L K + EA + G + G I D I +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 392 KVMIRGLCFDRDIVRAKELLWCM-LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
+I GLC + A+ELL M L VP + +N +ID Y R + A M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
+ + PNV T N ++ + + A +M +G+ +VVTY LI A C++ + +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A+ +M++ G PD Y L+ C +A K+ + G D + +L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 571 NMYCKLEEPVKAFNLFQD 588
++C K + + D
Sbjct: 554 GLFCDKNNAEKVYEMLTD 571
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 161/318 (50%), Gaps = 6/318 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
MV+ G PDV T ++NGLC G + +A LV M+E G P Y T+I G C +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQAL-ALVDRMVEEGHQP----YGTIINGLCKMG 55
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ AL L S M +T I+ + V N ++ LC++GH A+ + E ++D PD++T
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE-MHDKGIFPDVITY 114
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ +D + ++ + A L +M + + DVV ++ LIN L K ++ A +ML+
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+G+ P TYN +I K+ + +A +L M+ PD +++ +I G C + +
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
E+ M +V + + +I + + D+ A ++M+ GV PN T+ +++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 467 AHVKSGNIYRAYSLKEEM 484
+ + +A+++ E++
Sbjct: 295 SLCSKKELRKAFAILEDL 312
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 4/313 (1%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PD+VT T M+ +QA +L + M + + Y +INGLCK A
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNL 63
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+M + + YN +I L K+G A + M GI PD I+Y MI C
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
A++LL M+ + P + ++ +I+ + VS A ML+ G+ P T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
YN++I K + A + + M +K PDVVT++ LI C + D +++ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
++G + ++YT L+ C G+ A++ ++ SG+ +++ Q + C +E
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 581 KAFNLFQDWLESK 593
KAF + +D +S+
Sbjct: 304 KAFAILEDLQKSE 316
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 6/277 (2%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC EG++ A+ L MV++G P + I+NGLCK+G E A + L+ +M E
Sbjct: 20 LCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN-LLSKMEETHIKA 74
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V YN +I C A L++ M D GI P+ +T + ++ + C +G +A+++L
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+++ + PD+VT + ++ K + +A ++ +M + + + YN +I+G CK
Sbjct: 135 RDMIERQIN-PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK 193
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+N A M K PD T++ LI K + I M + GIV + ++
Sbjct: 194 QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
Y +I G C D+ A++LL M+++ + P I +
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
E + + + LC G E+A+ L M + V +N I++ LCK G A +
Sbjct: 38 EEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQN 97
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L EM + G P+++TY+ +I +C A L M + I P+ VT + L++AL
Sbjct: 98 -LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
+ G + EA+++ ++L P +T +D + K A + + M S D
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGI-FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
VV ++ LING CK + ++ CEM ++G++ + TY LI + G A +L
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
VM G+ P+ I+++ M+ LC +++ +A +L
Sbjct: 276 VMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A + LC +G A L M KG PDV T++ +++ C+ G A + L+R+M+E
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDA-EQLLRDMIE 139
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
P++VT++ LI V +A +Y M GI P +T N ++ C+ L +
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
AK+ML+ + + PD+VT + ++ Y K + ++ EM + + + V Y LI
Sbjct: 200 AKRMLDSMASKSCS-PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
+G C+ ++ A M+ GV P+ T+ ++ +L + + R+A IL + K
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + L EGK+ A + M+++G P T+N +++G CK + A L M
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML-DSMA 208
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
P++VT++TLI GYC VD + ++ M GI N VT L+H C+ G L
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
A+ +L +++ P+ +T + +E +AF++ +++++
Sbjct: 269 AAQDLLNVMISSGV-APNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 158/317 (49%), Gaps = 5/317 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C GK E AI+L + P++F ++ ++ +C G M +A + +E+ E G LP
Sbjct: 351 FCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRAST-IFQEIFELGLLP 406
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ V Y T+I GYC + DKA + ++ +G P+ T IL+ A G + +A+ +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ + + D+VT M Y K + + F L +EMR + DV YN+LI+ +
Sbjct: 467 RNMKTEGLKL-DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVV 525
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++ A E++++G +P + +IG K G +EA + M+ + + PD ++
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
++ G C + + +A L +L+ + P +++N +I Y D+ A LM+
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 451 KFGVHPNVFTYNALILA 467
+ G+ PN T++AL+L
Sbjct: 646 QRGMLPNESTHHALVLG 662
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 189/426 (44%), Gaps = 20/426 (4%)
Query: 125 ISLVKIGLRGYACEYS--YTEHAAT-------------VRLLCLEGKLEAAIRLQRIMVQ 169
ISL+K LR + E + + EH + +R C +G + L M
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
G PD+ ++ LCK G +++A L + L FG + V+ +++I G+C V +
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPE 358
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
+A+ L S ++PN + + +C G + A + +EI + +PD V T
Sbjct: 359 EAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLPDCVCYTTM 414
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+D Y +AF + + ++ + +LI + ++ A M +G+
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
D TYN L+ K + + ++ M GI PD +Y ++I + I A E
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
++ ++ VP + + +I + + D A + M + P+V T +AL+ +
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K+ + +A L ++L GL PDVV YN LI C++ + A +L MVQ+G P+
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 530 SYTELV 535
++ LV
Sbjct: 655 THHALV 660
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G+ + A + +++ G P + T ++ + G + A + R M G +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES-VFRNMKTEGLKLD 477
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+VTYN L+ GY + ++K L M GI P+ T NIL+H++ G++ EA +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E++ +P + T + + K +F +AF LW M M+ DVV + L++G CK
Sbjct: 538 ELIRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
Q M A ++L G+ PD YN LI G +AC ++G+M + G++P+E ++
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 392 KVMIRGL 398
++ GL
Sbjct: 657 HALVLGL 663
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 185/432 (42%), Gaps = 5/432 (1%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
E K+ A++L + Q G P ++ + +V +E A ++ V ML G N
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREF-VEHMLSRGRHLNAA 272
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+ I+ YC+ DK L M GI+P+ V + + LC+ G LKEA +L +
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK- 331
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
L D V+ + +D + K + +A L + R + ++ Y+ ++ +C
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGD 388
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
M A E+ + G+LPD Y +I G+T +A G + K G P + +
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I I A+ + M + + +N ++ YG+ ++ D M G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ P+V TYN LI + V G I A + E++ +G P + + +IG A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L M +PD+++ + L+ C ++A + K+L +GL D V L + Y
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 574 CKLEEPVKAFNL 585
C + + KA L
Sbjct: 629 CSVGDIEKACEL 640
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 163/359 (45%), Gaps = 4/359 (1%)
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
V+ AL L + GI P+R C L+ + L+ A++ +E +L+ + + V S
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS- 275
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
+F+ Y + F + + L M+ + D+VA+ V I+ LCK + A ++
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G+ D+ + + +I K GK EA + ++ + P+ Y + +C D++RA
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
+ + ++P + + +ID Y A +LK G P++ T LI A
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
+ G+I A S+ M T+GL DVVTYN L+ + +L EM G PD
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ +Y L+ +RG EA E +++++ G + + + + K + +AF L+
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 114/292 (39%), Gaps = 44/292 (15%)
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
REF++ M ++ ++ I C + + + M G+ PD +
Sbjct: 256 REFVE------HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAF 309
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+ I L K G +EA +L + GI D +S +I G C
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC----------------- 352
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
V KP AI L+ F + PN+F Y++ + +G++ R
Sbjct: 353 --KVGKP----------------EEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
A ++ +E+ GL PD V Y +I CNL D A Q +++ G+ P L + T L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G+ +AE + + GL D V L + Y K + K F L +
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
V++++ID R + V+ A+ + +FG+ P+ +L+ ++ + A E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
L++G + +L I C+ D +L M G RPD++++T + + C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
KEA K+ G+ D V V + + +CK+ +P +A L +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 23/248 (9%)
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD--RDIVR------ 406
++ILI +E K A + + + GI P RG+C ++I+R
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPS--------RGVCISLLKEILRVHGLEL 254
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNAL 464
A+E + ML+ V +L I Y C D M +G+ P++ +
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKY--CSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I K+G + A S+ ++ G+ D V+ + +I C + + A++L
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL--- 369
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
RP++ Y+ + C G+ A + +I + GL+ D V + + YC L KAF
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 585 LFQDWLES 592
F L+S
Sbjct: 430 YFGALLKS 437
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 158/317 (49%), Gaps = 5/317 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C GK E AI+L + P++F ++ ++ +C G M +A + +E+ E G LP
Sbjct: 351 FCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRAST-IFQEIFELGLLP 406
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ V Y T+I GYC + DKA + ++ +G P+ T IL+ A G + +A+ +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ + + D+VT M Y K + + F L +EMR + DV YN+LI+ +
Sbjct: 467 RNMKTEGLKL-DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVV 525
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++ A E++++G +P + +IG K G +EA + M+ + + PD ++
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
++ G C + + +A L +L+ + P +++N +I Y D+ A LM+
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 451 KFGVHPNVFTYNALILA 467
+ G+ PN T++AL+L
Sbjct: 646 QRGMLPNESTHHALVLG 662
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 189/426 (44%), Gaps = 20/426 (4%)
Query: 125 ISLVKIGLRGYACEYS--YTEHAAT-------------VRLLCLEGKLEAAIRLQRIMVQ 169
ISL+K LR + E + + EH + +R C +G + L M
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
G PD+ ++ LCK G +++A L + L FG + V+ +++I G+C V +
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPE 358
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
+A+ L S ++PN + + +C G + A + +EI + +PD V T
Sbjct: 359 EAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLPDCVCYTTM 414
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+D Y +AF + + ++ + +LI + ++ A M +G+
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
D TYN L+ K + + ++ M GI PD +Y ++I + I A E
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
++ ++ VP + + +I + + D A + M + P+V T +AL+ +
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K+ + +A L ++L GL PDVV YN LI C++ + A +L MVQ+G P+
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 530 SYTELV 535
++ LV
Sbjct: 655 THHALV 660
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G+ + A + +++ G P + T ++ + G + A + R M G +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES-VFRNMKTEGLKLD 477
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+VTYN L+ GY + ++K L M GI P+ T NIL+H++ G++ EA +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E++ +P + T + + K +F +AF LW M M+ DVV + L++G CK
Sbjct: 538 ELIRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
Q M A ++L G+ PD YN LI G +AC ++G+M + G++P+E ++
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 392 KVMIRGL 398
++ GL
Sbjct: 657 HALVLGL 663
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 185/432 (42%), Gaps = 5/432 (1%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
E K+ A++L + Q G P ++ + +V +E A ++ V ML G N
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREF-VEHMLSRGRHLNAA 272
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+ I+ YC+ DK L M GI+P+ V + + LC+ G LKEA +L +
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK- 331
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
L D V+ + +D + K + +A L + R + ++ Y+ ++ +C
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGD 388
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
M A E+ + G+LPD Y +I G+T +A G + K G P + +
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I I A+ + M + + +N ++ YG+ ++ D M G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ P+V TYN LI + V G I A + E++ +G P + + +IG A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L M +PD+++ + L+ C ++A + K+L +GL D V L + Y
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 574 CKLEEPVKAFNL 585
C + + KA L
Sbjct: 629 CSVGDIEKACEL 640
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 163/359 (45%), Gaps = 4/359 (1%)
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
V+ AL L + GI P+R C L+ + L+ A++ +E +L+ + + V S
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLS- 275
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
+F+ Y + F + + L M+ + D+VA+ V I+ LCK + A ++
Sbjct: 276 LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G+ D+ + + +I K GK EA + ++ + P+ Y + +C D++RA
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
+ + ++P + + +ID Y A +LK G P++ T LI A
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
+ G+I A S+ M T+GL DVVTYN L+ + +L EM G PD
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ +Y L+ +RG EA E +++++ G + + + + K + +AF L+
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 114/292 (39%), Gaps = 44/292 (15%)
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
REF++ M ++ ++ I C + + + M G+ PD +
Sbjct: 256 REFVE------HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAF 309
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+ I L K G +EA +L + GI D +S +I G C
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC----------------- 352
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
V KP AI L+ F + PN+F Y++ + +G++ R
Sbjct: 353 --KVGKP----------------EEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
A ++ +E+ GL PD V Y +I CNL D A Q +++ G+ P L + T L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G+ +AE + + GL D V L + Y K + K F L +
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
V++++ID R + V+ A+ + +FG+ P+ +L+ ++ + A E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
L++G + +L I C+ D +L M G RPD++++T + + C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
KEA K+ G+ D V V + + +CK+ +P +A L +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 23/248 (9%)
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD--RDIVR------ 406
++ILI +E K A + + + GI P RG+C ++I+R
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPS--------RGVCISLLKEILRVHGLEL 254
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNAL 464
A+E + ML+ V +L I Y C D M +G+ P++ +
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKY--CSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I K+G + A S+ ++ G+ D V+ + +I C + + A++L
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL--- 369
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
RP++ Y+ + C G+ A + +I + GL+ D V + + YC L KAF
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 585 LFQDWLES 592
F L+S
Sbjct: 430 YFGALLKS 437
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 199/438 (45%), Gaps = 7/438 (1%)
Query: 161 IRLQRIMVQKGFLP-DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
IR ++K P V N ++ K+G++E+ W+ R+M E G P L TYN L+
Sbjct: 171 IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELL-WVWRKMKENGIEPTLYTYNFLM 229
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
G + VD A ++ M I+P+ VT N ++ C+ G ++A + L ++ +
Sbjct: 230 NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHE 289
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
D +T + + + +F +L+ EM + ++V A++++I GLCK +N Y
Sbjct: 290 -ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
M++KG P+ Y +LI K G +A +L M G PD ++Y V++ GLC
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 400 FDRDIVRAKELL-WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
+ + A + C + L + + ++ +ID G+ V A + M + G +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAI-NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEM-LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ YNALI A K + A +L + M +G V TY +L+ ++ AL+L
Sbjct: 468 YCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD 527
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
M+ KG P + L C+ G A + ++ G++ D + + N CK
Sbjct: 528 MMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCKAG 586
Query: 578 EPVKAFNLFQDWLESKRD 595
+A L E R+
Sbjct: 587 RIKEACKLADGITERGRE 604
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 43/440 (9%)
Query: 123 ENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHI 182
+ I V ++ + + + A ++ G +E + + R M + G P ++T+N +
Sbjct: 169 DRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFL 228
Query: 183 VNGLCKVGLMEKAHDWLVREMLEFGPL-PNLVTYNTLIKGYCTVNSVDKAL--------- 232
+NGL ++ A V E++E G + P++VTYNT+IKGYC KA+
Sbjct: 229 MNGLVSAMFVDSAER--VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
Query: 233 --------------------------YLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
LY M + GIQ ++++ LC+ G L E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+ E ++ P++ TV +D Y K+ A L + M + DVV Y+V++N
Sbjct: 347 YTVFENMIRKGSK-PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
GLCKN + A Y G+ ++ Y+ LI L K G+ EA + MS+ G
Sbjct: 406 GLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN--AIL 444
D Y +I R + A L M + V+ I L G K+ N A+
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ-TVYTYTILLSGMFKEHRNEEALK 524
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
D+M+ G+ P + AL SG + RA + +E+ G+ D + +I C
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLC 583
Query: 505 NLRSHDFALQLRREMVQKGH 524
A +L + ++G
Sbjct: 584 KAGRIKEACKLADGITERGR 603
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 28/297 (9%)
Query: 104 FNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRL 163
+ +NM++ K + N+++ + + GYA G +E AIRL
Sbjct: 347 YTVFENMIR------KGSKPNVAIYTVLIDGYA----------------KSGSVEDAIRL 384
Query: 164 QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP-NLVTYNTLIKGY 222
M+ +GF PDV T++ +VNGLCK G +E+A D+ F L N + Y++LI G
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF--HTCRFDGLAINSMFYSSLIDGL 442
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
VD+A L+ M++ G + N L+ A ++ + EA + + + ++
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
+ T T+ + FK +A LW+ M + + L GLC + + A
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYIL-GVMSKMGIVPDEISYKVMIRGL 398
E+ GV+ DA + +I L K G+ +EAC + G+ + VP I VMI L
Sbjct: 563 ELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIR-TVMINAL 617
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 37/294 (12%)
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
+W +M++N +E + YN L+NGL ++ A M + PD TYN +I
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
K G+T++A L M G D+I+Y MI+ D D
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD--------------------- 307
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
+G C + + + + V P+ F+ +I K G + Y++ E M
Sbjct: 308 --------FGSCVALYQEMDEKGIQ----VPPHAFSL--VIGGLCKEGKLNEGYTVFENM 353
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
+ KG P+V Y +LI S + A++L M+ +G +PD+++Y+ +V C G
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES--KRDS 596
+EA + + GL + + L + K +A LF++ E RDS
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 124/307 (40%), Gaps = 1/307 (0%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P+ V+ + D + + +F W+ +Q ++ Y L++ L + ++
Sbjct: 116 PNFVSFVLKSDEIREKPDIAWSFFCWSR-KQKKYTHNLECYVSLVDVLALAKDVDRIRFV 174
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+ E+ K N LI + K G E ++ M + GI P +Y ++ GL
Sbjct: 175 SSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVS 234
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+ A+ + M + + P + +N +I Y + A+ M G + T
Sbjct: 235 AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKIT 294
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
Y +I A + +L +EM KG+ ++L+IG C + + M+
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI 354
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
+KG +P++ YT L+ G+ ++A +++ G D V ++ N CK
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 581 KAFNLFQ 587
+A + F
Sbjct: 415 EALDYFH 421
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 188/424 (44%), Gaps = 42/424 (9%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC +L+ AIR+ +MV G +PD + ++VN LCK G + A LV +M + G
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ-LVEKMEDHGYPS 174
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N VTYN L++G C + S++++L + G+ PN T + L+ A + EA K+L
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+EI+ + P+LV+ V + + K A +L+ E+ + +VV+YN+L+ LC
Sbjct: 235 DEIIVKGGE-PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG--IVPDE 388
+ A EM P TYNILI +L G+T +A +L MSK
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRD 447
SY +I LC + + + L M+ P +N I L V A + +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI------- 500
L K + F Y ++I + + GN + A+ L EM G PD TY+ LI
Sbjct: 414 LSNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Query: 501 ---GAA--------------------------CNLRSHDFALQLRREMVQKGHRPDLISY 531
GA C +R D A+++ MV+K P+ +Y
Sbjct: 473 MFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Query: 532 TELV 535
LV
Sbjct: 533 AILV 536
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 189/434 (43%), Gaps = 11/434 (2%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
+V G P+V ++ LCK ++KA ++ M+ G +P+ Y L+ C
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAI-RVIELMVSSGIIPDASAYTYLVNQLCKRG 155
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+V A+ L M D G N VT N LV LC G L ++ + +E ++ P+ T
Sbjct: 156 NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL-APNAFTY 214
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ ++ +K R +A L +E+ E ++V+YNVL+ G CK + A E+
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG + +YNIL+ L +G+ EA +L M P ++Y ++I L F +
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 407 AKELLWCML--NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
A ++L M N+ +N +I + V + D M+ PN TYNA+
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
+ + A+ + + + K Y +I + C + A QL EM + G
Sbjct: 395 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM----YCKLEEPV 580
PD +Y+ L+R C+ G A E + + +S + P FN CK+
Sbjct: 455 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES---ENCKPTVDNFNAMILGLCKIRRTD 511
Query: 581 KAFNLFQDWLESKR 594
A +F+ +E KR
Sbjct: 512 LAMEVFEMMVEKKR 525
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PDL + + D +FS + + +V L+ LCK + A
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
M+ G++PDA Y L+ L K G A ++ M G + ++Y ++RGLC
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+ ++ + + ++ + P ++ +++ + + A+ D ++ G PN+ +
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
YN L+ K G A +L E+ KG +VV+YN+L+ C + A L EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEA 547
P +++Y L+ G T++A
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQA 335
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + + LC +G AA +L M + GF PD T++ ++ GLC G+ A + L
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
P + +N +I G C + D A+ ++ M + PN T ILV + L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 264 KEAKKMLEEI 273
+ AK++L+E+
Sbjct: 546 ELAKEVLDEL 555
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 189/392 (48%), Gaps = 5/392 (1%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-WLVREMLEFGP 208
LLC E K+ A++ MVQ+G PDV ++ ++NGL + G + A + W M+ G
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW--NAMIRSGV 180
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSS-MADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ L+ G C VD A + + + ++ + V N L+ C+ G +++A+
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
L+ ++ PDLVT V +++Y+ N +A + EM ++ +++D +YN L+
Sbjct: 241 A-LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
C+ + Y + + ++ D +Y+ LI + TR+A + M + G+V +
Sbjct: 300 HCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
++Y +I+ + + AK+LL M + P I + I+D + +V A +
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M++ + P+ +YN+LI +SG + A L E+M K PD +T+ +IG +
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGK 479
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESC 539
A ++ +M+ KG D L++ SC
Sbjct: 480 KLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 202/445 (45%), Gaps = 15/445 (3%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD--WLVREMLEFGP 208
L G ++ A+++ M + F +N + L + E A W ++ M F
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPM-GFSL 77
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
+P TY+ I G C V D L S M G P+ N+ + LC + A +
Sbjct: 78 IP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
++ ++ PD+V+ T+ ++ F+ + A +WN M ++ + D A L+ GL
Sbjct: 136 TFFCMVQRGRE-PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194
Query: 329 CKNQLMNLAYGYACEMLKKG-VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
C + ++LAY E +K V YN LI K G+ +A + MSK+G PD
Sbjct: 195 CHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPD 254
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
++Y V++ + + RA+ ++ M+ + + +N ++ + R VS+ +
Sbjct: 255 LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR---VSHPDKCYN 311
Query: 448 LMLKFGVHP----NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
M+K + P +V +Y+ LI ++ N +AY L EEM KG+ +VVTY LI A
Sbjct: 312 FMVK-EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
+ A +L +M + G PD I YT ++ C GN +A + +++ + D
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 564 VPVQILFNMYCKLEEPVKAFNLFQD 588
+ L + C+ +A LF+D
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFED 455
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 11/359 (3%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK+ A+ + M++ G PD +V GLC ++ A++ + E+ + V
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN LI G+C ++KA L S M+ G +P+ VT N+L++ +N LK A+ ++ E++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 275 N-----DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
D L+ + H K F + EM DVV+Y+ LI C
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNF-----MVKEMEPRGF-CDVVSYSTLIETFC 336
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ AY EM +KG++ + TY LI A +EG + A +L M+++G+ PD I
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
Y ++ LC ++ +A + M+ + + P I +N +I R V+ AI + M
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
P+ T+ +I ++ + AY + ++M+ KG D + LI A+C++ +
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSA 515
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 36/343 (10%)
Query: 285 TSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
T + F+ K ++F +L ++M D+ A+NV ++ LC+ + A M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
+++G PD +Y ILI L++ GK +A I M + G+ PD + ++ GLC R +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 405 VRAKELLWCMLNNLMVP-KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
A E++ + + V +V+N +I + + + A + M K G P++ TYN
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGL---------------------------------- 489
L+ + + + RA + EM+ G+
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 490 -FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
F DVV+Y+ LI C + A +L EM QKG ++++YT L++ GN+ A+
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ ++ + GL D + + + CK KA+ +F D +E
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 11/311 (3%)
Query: 91 DMSSGHEKGQHAVFNALDNML--KGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATV 148
++ S K V+NAL + G +E+ + ++ +S KIG CE + +
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS--KIG-----CEPDLVTYNVLL 262
Query: 149 RLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP 208
L+ A + MV+ G D +++N ++ C+V +K ++++V+EM G
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG- 321
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
++V+Y+TLI+ +C ++ KA L+ M G+ N VT L+ A G+ AKK
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+L++ + + PD + T +DH K+ +A+ ++N+M ++ + D ++YN LI+GL
Sbjct: 382 LLDQ-MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
C++ + A +M K PD T+ +IG L + K A + M G D
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Query: 389 ISYKVMIRGLC 399
+I+ C
Sbjct: 501 DVSDTLIKASC 511
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
A +++EMR +S V YN I L + LA +M G FTY+ I
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
L K K +L M +G +PD ++ V + LC + + A + +CM+ P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL- 480
+ + ++I+ R V++A+ + M++ GV P+ AL++ + + AY +
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
EE+ + + V YN LI C + A L+ M + G PDL++Y L+
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
K AE A++++SG+ D L +C++ P K +N +E +
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 450 LKFGVHPNVFTYNALI--LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
+ F + P FTY+ I L VK ++ A L +M T G PD+ +N+ + C
Sbjct: 73 MGFSLIP--FTYSRFISGLCKVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQ 567
FA+Q MVQ+G PD++SYT L+ G +A E + +++SG+ D+
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 568 ILFNMYCKLEEPVKAFNLFQDWLESKR 594
L C + A+ + + ++S R
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSAR 215
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 3/319 (0%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
A+ +Q M + G P++ T+N ++G + G M +A L RE+ + N VTY TLI
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR-LFREIKD-DVTANHVTYTTLI 314
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
GYC +N +D+AL L M G P VT N ++ LCE+G ++EA ++L E ++ K
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE-MSGKKI 373
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
PD +T ++ Y K + + A + +M ++ +++D+ +Y LI+G CK + A
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
M++KG P TY+ L+ + + K E +L K G+ D Y+ +IR +C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
+ AK L M +V +++ + Y R V+ A D+M + N+
Sbjct: 494 KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLK 553
Query: 460 TYNALILAHVKSGNIYRAY 478
Y ++ ++ ++ R +
Sbjct: 554 LYKSISASYAGDNDVLRFF 572
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 157/381 (41%), Gaps = 38/381 (9%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
MV+ G + ++ +N +V+ K G EKA L+ EM E G P++ TYNTLI YC +
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEK-LLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+AL + M +G+ PN VT N +H G ++EA ++ EI +D + VT
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD--VTANHVTY 310
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T +D Y + + +A L M VV YN ++ LC++ + A EM
Sbjct: 311 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
K + PD T N LI A K A + M + G+ D SYK +I G C ++
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
AKE L+ M+ G P TY+ L+
Sbjct: 431 AKEELFSMIEK-----------------------------------GFSPGYATYSWLVD 455
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
L EE +GL DV Y LI C L D+A L M +KG
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 527 DLISYTELVRESCIRGNTKEA 547
D + +T + G EA
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEA 536
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 165/380 (43%), Gaps = 2/380 (0%)
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G P+L L+ D ++ M G+ N N+LVHA ++G ++A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+K+L E + + PD+ T + Y K +A S+ + M ++ + ++V YN I+
Sbjct: 223 EKLLSE-MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
G + M A E +K V + TY LI + EA + VM G P
Sbjct: 282 GFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
++Y ++R LC D I A LL M + P I N +I+ Y + +D+ +A+ +
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVK 400
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M++ G+ ++++Y ALI K + A M+ KG P TY+ L+ N
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQ 460
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
D +L E ++G D+ Y L+R C A+ + + K GL+ D V
Sbjct: 461 NKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIF 520
Query: 567 QILFNMYCKLEEPVKAFNLF 586
+ Y + + +A LF
Sbjct: 521 TTMAYAYWRTGKVTEASALF 540
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P L TV ++ K R + ++ +M + + ++ YNVL++ K+ A
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
EM +KGV PD FTYN LI K+ EA + M + G+ P+ ++Y I G F
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG--F 283
Query: 401 DRD-IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
R+ +R L+ + + + + + +ID Y R D+ A+ R++M G P V
Sbjct: 284 SREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
TYN+++ + G I A L EM K + PD +T N LI A C + A++++++M
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEER------------YA--------------- 552
++ G + D+ SY L+ C + A+E YA
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQ 463
Query: 553 ----KIL----KSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
K+L K GL D + L CKLE+ A LF+
Sbjct: 464 DEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFE 506
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 156/357 (43%), Gaps = 53/357 (14%)
Query: 253 LVHALCENGHLKEAKKMLE-----EILNDDKDIPDLV---------TSTVF---MDHYFK 295
++ L ++ H K A ++L+ E+L+ + LV S VF M +Y K
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAK 145
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ ++ ++R ++ + A VL+N L K +L + + +M+K GV+ +
Sbjct: 146 AGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
YN+L+ A K G +A +L M + G+ PD +Y
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY------------------------ 241
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
N +I +Y + A+ +D M + GV PN+ TYN+ I + G +
Sbjct: 242 -----------NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMR 290
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
A L E + + + VTY LI C + D AL+LR M +G P +++Y ++
Sbjct: 291 EATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
R+ C G +EA ++ + D++ L N YCK+E+ V A + + +ES
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 202/465 (43%), Gaps = 43/465 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK+E AI L R M KG PDV + ++ G C G A D ++ EM G P++V
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMI-EMDGTGKTPDIVI 468
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN L G T +A M + G++P VT N+++ L + G L +A+ E +
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 275 NDDKD----------------------------IPDLVTSTVFMDHYFKNREFIQAFSLW 306
+ ++ +P V T+F + +A L
Sbjct: 529 HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
+ M + +E + Y LI C+ + A + ++ K ++PD FTY I+I +
Sbjct: 589 DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
+ ++A + M + + PD ++Y V++ D ++ +E M ++P + +
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNS---DPELDMKRE----MEAFDVIPDVVYY 701
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
++I+ Y D+ M + + P+V TY L L + N+ R EM
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL-LKNKPERNLSR------EMKA 754
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE 546
+ PDV Y +LI C + A ++ +M++ G PD YT L+ C G KE
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 547 AEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
A+ + ++++SG+ D VP L C+ +KA L ++ LE
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE 859
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 195/446 (43%), Gaps = 17/446 (3%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ VR LC E ++E A + M + G PDV+ ++ I+ G K + KA D + +M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVD-VFNKM 352
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L+ N V +++++ YC + + +A L+ +T I +RV N+ AL + G +
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 264 KEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
+EA ++ E+ K I PD++ T + + AF L EM D+V YN
Sbjct: 413 EEAIELFREMTG--KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
VL GL N L A+ M +GV P T+N++I L G+ +A +
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
D K C D R L +PK + + L L +S A
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRL------EFPLPKSVYFTLFTSLCAEKDYISKA 584
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
D M K GV P Y LI A + N+ +A E ++TK + PD+ TY ++I
Sbjct: 585 QDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
C L A L +M ++ +PD+++Y+ L+ +E E ++ D
Sbjct: 645 YCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME-------AFDVIPD 697
Query: 563 HVPVQILFNMYCKLEEPVKAFNLFQD 588
V I+ N YC L + K + LF+D
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKD 723
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 221/520 (42%), Gaps = 50/520 (9%)
Query: 3 MSASLYVTCGETHLFPSHNVFQRFLNSAIQSIQQCVAQIFGSEHDI--IEHASFCGRICW 60
+S+ L C + ++++F+ F + I + C F + + +E A R
Sbjct: 364 VSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMT 423
Query: 61 EEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKM 120
+ + NY + IG C L K ++D+ + + N+L G L +
Sbjct: 424 GKGIAPDVINY-TTLIG-GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 121 MRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHN 180
+E +K+ + + +Y H + L G+L+ A + K D
Sbjct: 482 AQEAFETLKM-MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA---- 536
Query: 181 HIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT-VNSVDKALYLYSSMA 239
+V G C G ++ A + +R LEF PLP V Y TL C + + KA L M
Sbjct: 537 SMVKGFCAAGCLDHAFERFIR--LEF-PLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREF 299
G++P + L+ A C ++++A++ E IL K +PDL T T+ ++ Y + E
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE-ILVTKKIVPDLFTYTIMINTYCRLNEP 651
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVL----------------------------INGLCKN 331
QA++L+ +M++ ++ DVV Y+VL IN C
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ Y +M ++ ++PD TY +L+ + +RE M + PD Y
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYY 764
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
V+I C D+ AK + M+ + + P + +I + + A + D M++
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
GV P+V Y ALI ++G + +A L +EML KG+ P
Sbjct: 825 SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 17/432 (3%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNL----VTYNTL 218
L R+++ + P VF N I GLC + + A+ +L++ + + L + + Y +
Sbjct: 240 LSRLLISETRNPCVFYLNFI-EGLCLNQMTDIAY-FLLQPLRDANILVDKSDLGIAYRKV 297
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
++G C ++ A + M GI P+ + ++ +N ++ +A + ++L K
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
I ++ S++ + Y + F +A+ L+ E R+ ++ +D V YNV + L K + A
Sbjct: 358 RINCVIVSSI-LQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
EM KG+ PD Y LIG +GK +A ++ M G PD + Y V+ GL
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
+ A E L M N + P + N++I+ ++ A + + H +
Sbjct: 477 ATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA----EAFYESLEHKSR 532
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP-DVVTYNLLIGAACNLRSH-DFALQLR 516
+++ +G + A+ E + FP Y L + C + + A L
Sbjct: 533 ENDASMVKGFCAAGCLDHAF----ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
M + G P+ Y +L+ C N ++A E + ++ ++ D I+ N YC+L
Sbjct: 589 DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 577 EEPVKAFNLFQD 588
EP +A+ LF+D
Sbjct: 649 NEPKQAYALFED 660
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 39/292 (13%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE---------- 366
D+ A N LI+ + + ++ G+ E+ + G+ DA TY +++ ALW+
Sbjct: 181 DIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLL 240
Query: 367 -----GKTREAC--------------------YILGVMSKMGIVPDE----ISYKVMIRG 397
+TR C ++L + I+ D+ I+Y+ ++RG
Sbjct: 241 SRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRG 300
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
LC++ I A+ ++ M + + P V++ II+ + + ++ A+ + MLK N
Sbjct: 301 LCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRIN 360
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
++++ + + GN AY L +E + D V YN+ A L + A++L R
Sbjct: 361 CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFR 420
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
EM KG PD+I+YT L+ C++G +A + ++ +G D V +L
Sbjct: 421 EMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW------------- 198
C + A I+V K +PD+FT+ ++N C++ ++A+
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 199 --------------LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ 244
+ REM F +P++V Y +I YC +N + K L+ M I
Sbjct: 671 VTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV 730
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
P+ VT +L+ E +E K D K PD+ TV +D K + +A
Sbjct: 731 PDVVTYTVLLKNKPERNLSREMKAF------DVK--PDVFYYTVLIDWQCKIGDLGEAKR 782
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
++++M ++ ++ D Y LI CK + A M++ GV PD Y LI
Sbjct: 783 IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Query: 365 KEGKTREACYILGVMSKMGIVPDEIS 390
+ G +A ++ M + GI P + S
Sbjct: 843 RNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G L A R+ M++ G PD + ++ CK+G +++A + M+E G P+
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK-MIFDRMIESGVKPD 830
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
+V Y LI G C V KA+ L M + GI+P + + + + +A
Sbjct: 831 VVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYA 875
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 34/448 (7%)
Query: 141 YTEHAATVRLL----CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
Y E+ T L+ C E KL A+ + M++ G P+V + N +++G CK G M A
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFAL 273
Query: 197 DWLVREMLEFGPL--PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
L + + G PN VTYN++I G+C +D A + M +G+ N T LV
Sbjct: 274 QLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALV 333
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH----YFKNREFIQAFSLWNEMR 310
A G EA ++ +E+ + LV +TV + F + A S+ +M
Sbjct: 334 DAYGRAGSSDEALRLCDEMTS-----KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
+M++D +++ GLC+N + A + ++ +K ++ D +N L+ ++ K
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
A ILG M G+ D IS+ +I G + + RA E+ M+ +++N I+
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
Query: 431 D------LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
+ + G + V NA+ +D++ TYN L+ +K+GN+ A + +M
Sbjct: 509 NGLSKRGMAGAAEAVVNAMEIKDIV----------TYNTLLNESLKTGNVEEADDILSKM 558
Query: 485 LTKGLFPDV--VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE-SCIR 541
+ V VT+N++I C S++ A ++ + MV++G PD I+Y L+ S R
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQIL 569
K E IL+ ++H+ + I+
Sbjct: 619 SQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 207/466 (44%), Gaps = 12/466 (2%)
Query: 132 LRGY-ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG 190
+R Y AC S + VR G + A + +GF V N+ + L V
Sbjct: 138 IRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVN 197
Query: 191 LMEKAHDWLV-REMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVT 249
+++ W V +EM G + N+ T+N +I +C + + +AL ++ M G+ PN V+
Sbjct: 198 EIDRF--WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 250 CNILVHALCENGHLKEAKKMLEEI--LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
N+++ C+ G ++ A ++L ++ ++ + P+ VT ++ + K A +
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
+M ++ ++ + Y L++ + + A EM KG++ + YN ++ L+ EG
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
A +L M+ + D + +++RGLC + + A E + +V + N
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
++ + R K ++ A ML G+ + ++ LI ++K G + RA + + M+
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 488 GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
++V YN ++ A + M K D+++Y L+ ES GN +EA
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEA 551
Query: 548 EERYAKILKSGLMN--DHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
++ +K+ K V I+ N CK KA + + +E
Sbjct: 552 DDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVE 597
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 50/398 (12%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + L GK+ A R+ G+ V+ + +++ + GL E+A + M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAIS-VFNSMK 295
Query: 205 EFGPLPNLVTYNTLI----KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
E+G PNLVTYN +I KG V K + M G+QP+R+T N L+ A+C
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAK---FFDEMQRNGVQPDRITFNSLL-AVCSR 351
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
G L EA + +L++EM +E DV +
Sbjct: 352 GGLWEAAR-----------------------------------NLFDEMTNRRIEQDVFS 376
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
YN L++ +CK M+LA+ +M K ++P+ +Y+ +I K G+ EA + G M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM--LNNLMVPKPIV-WNLIIDLYGRCK 437
+GI D +SY + L + R++E L + + ++ + K +V +N ++ YG+
Sbjct: 437 YLGIALDRVSYNTL---LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
M + V PN+ TY+ LI + K G A + E + GL DVV Y+
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
LI A C A+ L EM ++G P++++Y ++
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 176/382 (46%), Gaps = 32/382 (8%)
Query: 151 LCLEGKL-EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
+C G L EAA L M + DVF++N +++ +CK G M+ A + L +M +
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA-QMPVKRIM 406
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PN+V+Y+T+I G+ D+AL L+ M GI +RV+ N L+ + G +EA +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L E+ + D+VT + Y K ++ + ++ EM++ + +++ Y+ LI+G
Sbjct: 467 LREMASVGIK-KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
K L A E G+ D Y+ LI AL K G A ++ M+K GI P+ +
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 390 SYKVMI----RGLCFDR--DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
+Y +I R DR D L + + L N +I L+G+ SN
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSS-SALSALTETEGNRVIQLFGQLTTESNNR 644
Query: 444 LTRDL----------------MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
T+D M + + PNV T++A++ A + + A L EE+
Sbjct: 645 TTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR-- 702
Query: 488 GLFPDV---VTYNLLIGAACNL 506
LF + V + LL+G N+
Sbjct: 703 -LFDNKVYGVVHGLLMGQRENV 723
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 1/276 (0%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL-MNLAYGYACEMLKKGVLPDAFTYNIL 359
+A S++N M++ + ++V YN +I+ K + + EM + GV PD T+N L
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
+ + G A + M+ I D SY ++ +C + A E+L M +
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+P + ++ +ID + + A+ M G+ + +YN L+ + K G A
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
+ EM + G+ DVVTYN L+G +D ++ EM ++ P+L++Y+ L+
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
G KEA E + + +GL D V L + CK
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG-KTREACYIL 376
V A++ LI+ ++ L A M + G+ P+ TYN +I A K G + ++
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIV-WNLIIDLY-- 433
M + G+ PD I++ ++ +C + A L+ + N + + + +N ++D
Sbjct: 328 DEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
G D++ IL + M + PNV +Y+ +I K+G A +L EM G+ D
Sbjct: 387 GGQMDLAFEILAQ--MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
V+YN L+ + + AL + REM G + D+++Y L+ +G E ++ + +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
+ + ++ + + L + Y K +A +F+++
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 3/348 (0%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
T+ LI+ Y +A++ ++ M D G P+++ +I++ L EA+ + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D+ PD++ T + + + E +A ++ EM+ +E +V Y+++I+ LC+
Sbjct: 248 --KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
++ A+ +ML G P+A T+N L+ K G+T + + M K+G PD I+Y
Sbjct: 306 ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNF 365
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I C D ++ A ++L M+ +N I + +DV+ A M++
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
PN TYN L+ V S + +K+EM K + P+V TY LL+ C + + A
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIR-GNTKEAEERYAKILKSGLM 560
+L +EMV++ +S E+V R G K+ EE K+++ GL+
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 142/278 (51%), Gaps = 3/278 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
VR C G++ A ++ + M G P+V+T++ +++ LC+ G + +AHD + +ML+ G
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD-VFADMLDSG 320
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
PN +T+N L++ + +K L +Y+ M G +P+ +T N L+ A C + +L+ A
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
K+L ++ ++ +T+F + K R+ A ++++M + E + V YN+L+
Sbjct: 381 KVLNTMIKKKCEVNASTFNTIFR-YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
++ ++ EM K V P+ TY +L+ G A + M + +
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 388 EIS-YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
+S Y++++ L + + +EL+ M+ +V +P+
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K R+F A+ L + M+ ++E+ + + +LI + L + A M G +PD
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
++I+I L ++ + EA + K PD I Y ++RG C +I A+++ M
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ P ++++ID RC +S A ML G PN T+N L+ HVK+G
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
+ + +M G PD +TYN LI A C + + A+++ M++K + ++ +
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
R + + A Y+K++++ + V IL M+
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 163/398 (40%), Gaps = 49/398 (12%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ E S +R G A+ M G +PD + +++ L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 192 MEKAHDWL--VREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVT 249
+A + +++ E P+++ Y L++G+C + +A ++ M GI+PN T
Sbjct: 237 ASEAQSFFDSLKDRFE----PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYT 292
Query: 250 CNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM 309
+I++ ALC G + A + ++L D P+ +T M + K + ++N+M
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADML-DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
++ E D + YN LI C+++ + A M+KK +A T+N + + K+
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDV 411
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
A + M + P+ ++Y +++R
Sbjct: 412 NGAHRMYSKMMEAKCEPNTVTYNILMR--------------------------------- 438
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML-TKG 488
++ K + + M V PNV TY L+ G+ AY L +EM+ K
Sbjct: 439 --MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC 496
Query: 489 LFPDVVTYNLLIGA---ACNLRSHDFALQLRREMVQKG 523
L P + Y +++ A L+ H+ +L +M+QKG
Sbjct: 497 LTPSLSLYEMVLAQLRRAGQLKKHE---ELVEKMIQKG 531
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 18/294 (6%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
AF W R + YN +I+ K + +LA+ M + V T+ ILI
Sbjct: 135 AFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIR 194
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ G EA + M G VPD+I++ ++I L R A+ + L + P
Sbjct: 195 RYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF-FDSLKDRFEP 253
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
IV+ ++ + R ++S A M G+ PNV+TY+ +I A + G I RA+ +
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+ML G P+ +T+N L+ + LQ+ +M + G PD I+Y L+ C
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
N + A K+L + + K E FN ++E KRD
Sbjct: 374 ENLENA----VKVLNTMIKK-------------KCEVNASTFNTIFRYIEKKRD 410
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 216/468 (46%), Gaps = 43/468 (9%)
Query: 147 TVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
VR C E K++AA + M + GF DV+ +++ CK + +A +L + ML
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDK-MLGK 347
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G N V + +++ YC ++ +AL + D I +RV N+ AL + G ++EA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L+E + D +PD++ T +D Y + + A L +EM N M D++ YNVL++
Sbjct: 408 FELLQE-MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM------S 380
GL +N M +G P+A T +++I L K +EA + +
Sbjct: 467 GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN 526
Query: 381 KMGIVP-------DEISYKVMIR---------------GLCFDRDIVRAKELLWCMLNNL 418
K V + +YK +R LC + + +A ++L M
Sbjct: 527 KASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ P + +I + + +V A + D M++ G+ P++FTY +I + + + +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 479 SLKEEMLTKGLFPDVVTYNLLIG----------AACNLRSH---DFALQLRREMVQKGHR 525
SL E+M +G+ PDVVTY +L+ C+++ A ++ RE G
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
D++ YT L+ C N ++A E + +++ SGL D V L + Y
Sbjct: 707 LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 219/535 (40%), Gaps = 88/535 (16%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
A EY+Y A V+ LC +G LE A L +++ VF + +NGLC G EKA
Sbjct: 214 ANEYTY---AIVVKALCRKGNLEEAAML---LIEN---ESVFGYKTFINGLCVTGETEKA 264
Query: 196 HDWLVREMLEFGPLPN---LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNI 252
L+ E+++ L +++G+C + A + M + G + C
Sbjct: 265 V-ALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLA 323
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS-------------------------T 287
++ C+N +L EA L+++L + ++ S
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 288 VFMDHYFKNREFI---------QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
+F+D N F +AF L EM+ + DV+ Y LI+G C + A
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
EM+ G+ PD TYN+L+ L + G E I M G P+ ++ V+I GL
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Query: 399 CFDRDIVRAKELLW-----CMLNNLMVPK--------------------PIVWNLIIDLY 433
CF R + A++ C N K P+ ++ I L+
Sbjct: 504 CFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF 563
Query: 434 -GRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
C + + A M + V P +I A K N+ A L + M+ +GL
Sbjct: 564 FSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV----------RESC- 539
PD+ TY ++I C L A L +M Q+G +PD+++YT L+ E+C
Sbjct: 624 PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCS 683
Query: 540 IRGNT--KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
++G ++A E + +G+ D V +L + CK+ +A LF ++S
Sbjct: 684 VQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 26/387 (6%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G++E A L + M +G +PDV + +++G C G + A D L+ EM+ G P+L+T
Sbjct: 402 GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD-LIDEMIGNGMSPDLIT 460
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN L+ G ++ L +Y M G +PN VT ++++ LC +KEA+ +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL- 519
Query: 275 NDDKDIPDLVTSTV--FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
++ P+ S V + + + + L +R++ Y L LC
Sbjct: 520 --EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKS-------VYIKLFFSLCIEG 570
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+ A+ +M V P +IGA K REA + M + G++PD +Y
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK-------DVSNAILT 445
+MI C ++ +A+ L M + P + + +++D Y + V +
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 446 R---DLMLKF---GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
R +++ +F G+ +V Y LI K N+ +A L + M+ GL PD+V Y L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRP 526
I + D A+ L E+ +K + P
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 193/471 (40%), Gaps = 51/471 (10%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK+ + L + + Q G + +T+ +V LC+ G +E+A L+ FG
Sbjct: 195 GKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFG------- 247
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPN---RVTCNILVHALCENGHLKEAKKMLE 271
Y T I G C +KA+ L + D R ++V C +K A+ ++
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E+ + D+ +D Y KN +A ++M ++V+ V ++++ CK
Sbjct: 308 EMEEIGFGL-DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A E + D YN+ AL K G+ EA +L M GIVPD I+Y
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINY 426
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I G C +V A +L+ M+ N M P I +N+++ R + + M
Sbjct: 427 TTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA 486
Query: 452 FGVHPNVFTYNALI---------------------------LAHVK-------SGNIYRA 477
G PN T + +I + VK S Y+A
Sbjct: 487 EGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKA 546
Query: 478 YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+ E L K ++ + ++L I ++HD ++ V+ G +++
Sbjct: 547 FVRLEYPLRKSVYIKLF-FSLCIEGYLE-KAHDVLKKMSAYRVEPGRS----MCGKMIGA 600
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
C N +EA+ + +++ GL+ D I+ + YC+L E KA +LF+D
Sbjct: 601 FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFED 651
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 186 LCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQP 245
LC G +EKAHD L ++M + P +I +C +N+V +A L+ +M + G+ P
Sbjct: 566 LCIEGYLEKAHDVL-KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 246 NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFK-NREFIQAF 303
+ T I++H C L++A+ + E++ + I PD+VT TV +D Y K + E +
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDM--KQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 304 SLWNEM-RQNSMEV-----------DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
S+ E+ ++ + EV DVV Y VLI+ CK + A M+ G+ P
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
D Y LI + +++G A ++ +SK +P E S++ ++
Sbjct: 743 DMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE-SFEAAVK 786
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 147/403 (36%), Gaps = 65/403 (16%)
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
KA ++L+ M EFG + L+T L+ + G+ N T I+
Sbjct: 182 KACNFLMNRMTEFGKIGMLMT-------------------LFKQLKQLGLCANEYTYAIV 222
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
V ALC G+L+EA +L E NE
Sbjct: 223 VKALCRKGNLEEAAMLLIE----------------------------------NE----- 243
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL---IGALWKEGKTR 370
V Y INGLC A E++ + L +L + E K +
Sbjct: 244 ---SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
A ++ M ++G D + +I C + ++ A L ML + ++ +LI+
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
Y + A+ + + YN A K G + A+ L +EM +G+
Sbjct: 361 QCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIV 420
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
PDV+ Y LI C AL L EM+ G PDLI+Y LV G+ +E E
Sbjct: 421 PDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEI 480
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
Y ++ G + V ++ C VK F LE K
Sbjct: 481 YERMKAEGPKPNAVTNSVIIEGLC-FARKVKEAEDFFSSLEQK 522
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 161/414 (38%), Gaps = 68/414 (16%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVN---SVDKALYLYSSMADTGIQPNRVTCNILVH 255
+R++ E G PN+ Y TL++ T +D L + G T L+
Sbjct: 76 FLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGF-----TVMDLIE 130
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
+ E K+ +L + S + Y F +A + + ++
Sbjct: 131 VIGEQAEEKKRSFVL------------IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCV 178
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
VD+ A N L+N + + + + ++ + G+ + +TY I++ AL ++G EA +
Sbjct: 179 VDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML 238
Query: 376 LGVMSKMGIVPDE--ISYKVMIRGLCFDRDIVRAKELL---------------------- 411
L + +E YK I GLC + +A L+
Sbjct: 239 L--------IENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVV 290
Query: 412 --WCMLNNLMVPKPIVWNL--------------IIDLYGRCKDVSNAILTRDLMLKFGVH 455
+C + + ++ + +ID Y + ++ A+ D ML G+
Sbjct: 291 RGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLK 350
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
N + ++ + K A +E +F D V YN+ A L + A +L
Sbjct: 351 VNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
+EM +G PD+I+YT L+ C++G +A + +++ +G+ D + +L
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 196/417 (47%), Gaps = 5/417 (1%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
DV + ++NGL + G ++AH + ++E G P+L+TY TL+ L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHS-IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
S + G++P+ + N +++A E+G+L +A K+ E+ + + P T + Y
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK-MKESGCKPTASTFNTLIKGYG 435
Query: 295 KNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K + ++ L + M R ++ + N+L+ C + + A+ +M GV PD
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 354 FTYNILIGALWKEGKTREA-CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
T+N L A + G T A I+ M + P+ + ++ G C + + A +
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M + P V+N +I + D+ DLM +FGV P+V T++ L+ A G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
++ R + +ML G+ PD+ +++L + A Q+ +M + G RP+++ YT
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 533 ELVRESCIRGNTKEAEERYAKILK-SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+++ C G K+A + Y K+ GL + + L + + ++P KA L +D
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 153/369 (41%), Gaps = 40/369 (10%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
+ G PD N I+N + G +++A + +M E G P T+NTLIKGY + +
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMK-IFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 229 DKALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
+++ L M D +QPN TCNILV A C ++EA ++ ++ + PD+VT
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK-PDVVTFN 499
Query: 288 VFMDHYFKNREFIQAFSLW-NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
Y + A + M N ++ +V ++NG C+ M A + M +
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
GV P+ F +N LI ++ +M + G+ PD +++ ++ D+ R
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF------- 459
+E+ ML + P ++++ Y R + A + M KFGV PNV
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 460 -----------------------------TYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
TY LI ++ ++A L ++M K +
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Query: 491 PDVVTYNLL 499
P T L+
Sbjct: 740 PTRKTMQLI 748
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 155/347 (44%), Gaps = 4/347 (1%)
Query: 97 EKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGK 156
E G + + ++KG ++ + E+ L+ + LR + + V+ C + K
Sbjct: 417 ESGCKPTASTFNTLIKG-YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
+E A + M G PDV T N + ++G A D ++ ML PN+ T
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
T++ GYC +++AL + M + G+ PN N L+ + +++ +++ +
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLMEE 594
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
PD+VT + M+ + + + ++ +M + ++ D+ A+++L G +
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM-GIVPDEISYKVMI 395
A +M K GV P+ Y +I G+ ++A + M + G+ P+ +Y+ +I
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G + +A+ELL M +VP LI D + + VSN+
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW-KSIGVSNS 760
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 194/429 (45%), Gaps = 4/429 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G A++L + G T I++ L G +A + L E+ + G P
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA-EALFEELRQSGIKPRTRA 341
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN L+KGY + A + S M G+ P+ T ++L+ A G + A+ +L+E+
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 275 NDDKDIPDLVTSTVFMDHYFKNR-EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D V S + F++R E+ + F + EM+ ++ D YNV+I+ K
Sbjct: 402 AGDVQPNSFVFSRLLAG--FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
++ A ML +G+ PD T+N LI K G+ A + M + G +P +Y +
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
MI K LL M + ++P + ++D+YG+ ++AI + M G
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ P+ YNALI A+ + G +A + M + GL P ++ N LI A R A
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
+ + M + G +PD+++YT L++ ++ Y +++ SG D +L +
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Query: 574 CKLEEPVKA 582
+++ ++A
Sbjct: 700 RYMKQTLRA 708
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 45/436 (10%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME-----KAHDWLVREMLEFGPLPN 211
+E A+ L M Q G+ D ++ ++ L + ++ + + + R+ LE +
Sbjct: 213 IEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL----D 268
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+ N +I G+ KAL L TG+ T ++ AL ++G EA+ + E
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E +RQ+ ++ AYN L+ G K
Sbjct: 329 E------------------------------------LRQSGIKPRTRAYNALLKGYVKT 352
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A EM K+GV PD TY++LI A G+ A +L M + P+ +
Sbjct: 353 GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVF 412
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
++ G + + ++L M + + P +N++ID +G+ + +A+ T D ML
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P+ T+N LI H K G A + E M +G P TYN++I + + D
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
+L +M +G P+++++T LV G +A E ++ GL L N
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 572 MYCKLEEPVKAFNLFQ 587
Y + +A N F+
Sbjct: 593 AYAQRGLSEQAVNAFR 608
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN L+ V++ LY+ M + + P+ T N LV+ C+ G++ EAK+ + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D PD T T F+ + + +E AF ++ EM QN + V+Y LI GL + + +
Sbjct: 183 QAGCD-PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A +M P+ TY +LI AL G+ EA + MS+ GI PD+ Y V+
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC-KDVSNAILTRDLMLKFG 453
I+ C + A LL ML N ++P I +N +I G C K+V A+ ML+
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK--GFCKKNVHKAMGLLSKMLEQN 359
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
+ P++ TYN LI SGN+ AY L M GL P+
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 9/270 (3%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G +E RL M++ PD++T N +VNG CK+G + +A + V +++ G P+ T
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY-VTWLIQAGCDPDYFT 192
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y + I G+C VD A ++ M G N V+ L++ L E + EA +L + +
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK-M 251
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
DD P++ T TV +D + + +A +L+ +M ++ ++ D Y VLI C +
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM---GIVPDEISY 391
+ A G ML+ G++P+ TYN LI K+ + +G++SKM +VPD I+Y
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKA----MGLLSKMLEQNLVPDLITY 367
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+I G C ++ A LL M + +VP
Sbjct: 368 NTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
L+ EM ++ + D+ +N L+NG CK + A Y +++ G PD FTY I
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
+ + A + M++ G +E+SY +I GL + I A LL M ++ P
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
+ ++ID S A+ M + G+ P+ Y LI + + A L E M
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
L GL P+V+TYN LI C H A+ L +M+++ PDLI+Y L+ C GN
Sbjct: 322 LENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 545 KEAEERYAKILKSGLMNDHVPV 566
A + + +SGL+ + V
Sbjct: 381 DSAYRLLSLMEESGLVPNQRTV 402
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ Y + + + C +++AA ++ + M Q G + ++ ++ GL + +++A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
LV+ M + PN+ TY LI C +A+ L+ M+++GI+P+ +L+
Sbjct: 245 LSLLVK-MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
+ C L EA +LE +L +N +
Sbjct: 304 SFCSGDTLDEASGLLEHML------------------------------------ENGLM 327
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
+V+ YN LI G CK + A G +ML++ ++PD TYN LI G A +
Sbjct: 328 PNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Query: 376 LGVMSKMGIVPDE 388
L +M + G+VP++
Sbjct: 387 LSLMEESGLVPNQ 399
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 342 CEMLKKGVLPDAFT---------YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
C ++KG D+F YN L+ +L + G E + M + + PD ++
Sbjct: 103 CRTMRKG---DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFN 159
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++ G C +V AK+ + ++ P + I + R K+V A M +
Sbjct: 160 TLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN 219
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G H N +Y LI ++ I A SL +M P+V TY +LI A C A
Sbjct: 220 GCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEA 279
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
+ L ++M + G +PD YT L++ C EA +L++GLM + + L
Sbjct: 280 MNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG 339
Query: 573 YCKLEEPVKAFNLFQDWLE 591
+CK + KA L LE
Sbjct: 340 FCK-KNVHKAMGLLSKMLE 357
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 103 VFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIR 162
+ L + L GS ++ + M + + G++ C Y+ ++ C L+ A
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYT-----VLIQSFCSGDTLDEASG 316
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
L M++ G +P+V T+N ++ G CK + + L+ +MLE +P+L+TYNTLI G
Sbjct: 317 LLEHMLENGLMPNVITYNALIKGFCKKNVHKAM--GLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVT 249
C+ ++D A L S M ++G+ PN+ T
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
K L ML +L+ P +N +++ Y + V A +++ G P+ FTY + I
Sbjct: 140 KRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITG 199
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
H + + A+ + +EM G + V+Y LI + D AL L +M P+
Sbjct: 200 HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
+ +YT L+ C G EA + ++ +SG+ D +L +C + +A L +
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 588 DWLES 592
LE+
Sbjct: 320 HMLEN 324
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 21/445 (4%)
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
I +K F+P + +N ++N LC + + AH LV +M G LP++VT+ TLI GYC +
Sbjct: 152 IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHK-LVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
++ A ++ M GI+PN +T ++L+ + ++ +K+++E+ K+ D
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 286 STV----FMDHYFKNREFIQAFSLWNEMRQ-NSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
+D + F F + M S+ V+ AY +I+ LC+ + + A
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE-FAYGHMIDSLCRYRRNHGAARI 329
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
M KG+ P +YN +I L K+G A +L S+ P E +YK+++ LC
Sbjct: 330 VYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC-----KDVSNAILTRDLMLKFGVH 455
+ D +A+ +L ML + ++N I L G C ++ N +++ ML+
Sbjct: 390 ELDTGKARNVLELMLRKEGADRTRIYN--IYLRGLCVMDNPTEILNVLVS---MLQGDCR 444
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLT-KGLFPDVVTYN-LLIGAACNLRSHDFAL 513
P+ +T N +I K G + A + ++M+T K PD VT N ++ G R+ +
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L R M + +P +++Y ++R EA + ++ K+ + D I+ +
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 574 CKLEEPVKAFNLFQD--WLESKRDS 596
C + A + D W + D+
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDA 589
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 175/415 (42%), Gaps = 40/415 (9%)
Query: 102 AVFNALDNMLK-GSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAA 160
A N +D+M + G + + EN+SL + E++Y + LC + A
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCE----SVNVEFAY---GHMIDSLCRYRRNHGA 326
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
R+ IM KG P ++N I++GLCK G +A+ L+ E EF P+ TY L++
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ-LLEEGSEFEFFPSEYTYKLLME 385
Query: 221 GYCTVNSVDKALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
C KA + M G R+ NI + LC + E +L +L D
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIY-NIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM-EVDVVAYNVLINGLCKNQLMNLAY 338
PD T ++ K A + ++M D V N ++ GL LA
Sbjct: 445 -PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL-------LAQ 496
Query: 339 GYACEML--------KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
G A E L + + P YN +I L+K K EA + G + K + D +
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK----PIVWNLIIDLYGRCKD--VSNAIL 444
Y ++I GLC + AK+ W ++++ P V+ L G C+ +S+A
Sbjct: 557 YAIIIDGLCVTNKVDMAKKF-W---DDVIWPSGRHDAFVYAAF--LKGLCQSGYLSDACH 610
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ G PNV YN +I +SG AY + EEM G PD VT+ +L
Sbjct: 611 FLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK 194
+ EY+Y + LC E A + +M++K +N + GLC + +
Sbjct: 374 FPSEYTYK---LLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 195 AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG--IQPNRVTCNI 252
+ LV ML+ P+ T NT+I G C + VD A+ + M TG P+ VT N
Sbjct: 431 ILNVLV-SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM-TGKFCAPDAVTLNT 488
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
++ L G +EA +L ++ ++K P +V + FK + +A S++ ++ +
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
S+ D Y ++I+GLC +++A + +++ DAF Y + L + G +A
Sbjct: 549 SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR-AKELLWCMLNNLMVPKPIVWNLIID 431
C+ L ++ G +P+ + Y +I C + R A ++L M N P + W ++
Sbjct: 609 CHFLYDLADSGAIPNVVCYNTVI-AECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
Query: 432 LY 433
L+
Sbjct: 668 LH 669
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 153/418 (36%), Gaps = 44/418 (10%)
Query: 219 IKGYCTVN-SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
I C V + D+AL + + G +P+ + + ++H+LC+ G EA + L
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV--DVVAYNVLINGLCKNQLMN 335
IPD T V + +R + + + + E + YN L+N LC +
Sbjct: 121 F-IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVI 179
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A+ +M +G LPD T+ LIG + + A + M GI P+ ++ V+I
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 396 RGLCFDRDIVRAKEL---LWCMLNNLM--------------------------------- 419
G RD+ ++L LW + N
Sbjct: 240 GGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMS 299
Query: 420 ----VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
V + +ID R + A +M G+ P +YNA+I K G
Sbjct: 300 LCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCM 359
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
RAY L EE FP TY LL+ + C A + M++K Y +
Sbjct: 360 RAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYL 419
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
R C+ N E +L+ D + + N CK+ A + D + K
Sbjct: 420 RGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK 477
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 148/370 (40%), Gaps = 3/370 (0%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y +I C A + M G++P R + N ++H LC++G A ++LEE
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ + P T + M+ K + +A ++ M + YN+ + GLC
Sbjct: 369 -SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG-VMSKMGIVPDEISYK 392
ML+ PD +T N +I L K G+ +A +L +M+ PD ++
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 393 VMIRGLCFDRDIVRAKELL-WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
++ GL A ++L M N + P + +N +I + A+ + K
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
V + TY +I + + A ++++ D Y + C
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD 607
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A ++ G P+++ Y ++ E G +EA + ++ K+G D V +IL
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
Query: 572 MYCKLEEPVK 581
++ ++ V+
Sbjct: 668 LHDSMDLTVE 677
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 2/377 (0%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
GF P V T+ ++N KVG + KA + + R M E G NL TY+ +I G+ +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALE-VSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A ++ M G++P+ + N ++ A C G++ A + ++E + + P T +
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE-MQKLRHRPTTRTFMPII 596
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
Y K+ + ++ +++ MR+ V +N LINGL + + M A EM GV
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
+ TY ++ G T +A + G+ D +Y+ +++ C + A +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M + V+N++ID + R DV A M K GV P++ TY + I A K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+G++ RA EEM G+ P++ TY LI + AL EM G +PD
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 531 YTELVRESCIRGNTKEA 547
Y L+ R + EA
Sbjct: 837 YHCLLTSLLSRASIAEA 853
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 189/410 (46%), Gaps = 2/410 (0%)
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM 238
+ I+ C+ ME+A + LVREM E G + Y+T++ GY V K L ++ +
Sbjct: 417 YGKIIYAHCQTCNMERA-EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 239 ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNRE 298
+ G P VT L++ + G + +A + + ++ ++ +L T ++ ++ + K ++
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALE-VSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 299 FIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
+ AF+++ +M + M+ DV+ YN +I+ C M+ A EM K P T+
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
+I K G R + + +M + G VP ++ +I GL R + +A E+L M
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ + I+ Y D A + G+ ++FTY AL+ A KSG + A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
++ +EM + + + YN+LI A L ++M ++G +PD+ +YT +
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 539 CIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G+ A + ++ G+ + L + + P KA + +++
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 172/380 (45%), Gaps = 18/380 (4%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-----LVREMLEFGPL 209
GK+ A+ + R+M ++G ++ T++ ++NG K+ DW + +M++ G
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL------KDWANAFAVFEDMVKEGMK 551
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P+++ YN +I +C + ++D+A+ M +P T ++H ++G ++ + ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+ ++ +P + T ++ + R+ +A + +EM + + Y ++ G
Sbjct: 612 FD-MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
A+ Y + +G+ D FTY L+ A K G+ + A + MS I +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
Y ++I G D+ A +L+ M + P + I + D++ A T + M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS- 508
GV PN+ TY LI ++ +A S EEM G+ PD Y+ L+ + + S
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 509 -----HDFALQLRREMVQKG 523
+ + + +EMV+ G
Sbjct: 851 AEAYIYSGVMTICKEMVEAG 870
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 167/391 (42%), Gaps = 12/391 (3%)
Query: 190 GLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVT 249
G M +A + R M G P Y +LI Y +D+AL M + GI+ + VT
Sbjct: 323 GDMHRARETFER-MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381
Query: 250 CNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEM 309
+++V + GH + A +E K + + + H + +A +L EM
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH-CQTCNMERAEALVREM 440
Query: 310 RQNSMEVDVVAYNVLINGLC-----KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
+ ++ + Y+ +++G K L+ C G P TY LI
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC-----GFTPTVVTYGCLINLYT 495
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI 424
K GK +A + VM + G+ + +Y +MI G +D A + M+ M P I
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
++N II + ++ AI T M K P T+ +I + KSG++ R+ + + M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
G P V T+N LI R + A+++ EM G + +YT++++ G+T
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
+A E + ++ GL D + L CK
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 10/410 (2%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++ A+ R M ++G + T++ IV G K G E A W E N Y
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF-DEAKRIHKTLNASIYG 418
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH--LKEAKKMLE--E 272
+I +C ++++A L M + GI I ++ +G+ + + KK L +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGID-----APIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
L + P +VT ++ Y K + +A + M++ ++ ++ Y+++ING K +
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
A+ +M+K+G+ PD YN +I A G A + M K+ P ++
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+I G D+ R+ E+ M VP +N +I+ + + A+ D M
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
GV N TY ++ + G+ +A+ + +GL D+ TY L+ A C A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
L + +EM + + Y L+ RG+ EA + ++ K G+ D
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 144/354 (40%), Gaps = 52/354 (14%)
Query: 266 AKKMLEEILNDDKD-------------IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
++K L+ IL+ + D P + + Y + + +A + MR
Sbjct: 279 SRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+ Y LI+ + M+ A +M ++G+ TY++++G K G A
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM-----------LNNLM-- 419
Y ++ + Y +I C ++ RA+ L+ M + +M
Sbjct: 399 DYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDG 458
Query: 420 ----------------------VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
P + + +I+LY + +S A+ +M + GV N
Sbjct: 459 YTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ TY+ +I VK + A+++ E+M+ +G+ PDV+ YN +I A C + + D A+Q +
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
EM + HRP ++ ++ G+ + + E + + + G VP FN
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC----VPTVHTFN 628
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 8/308 (2%)
Query: 201 REMLEFGPLPNLVTYNTLIKGYCTVN-SVDKALYLYSSMADTGIQPNRVTCNILVHALCE 259
+ M E G P + + N LIK C + +VD L ++ M G P+ T L+ LC
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 260 NGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVV 319
G + EAKK+ E++ D P +VT T ++ ++ +A EM+ +E +V
Sbjct: 205 FGRIDEAKKLFTEMVEKDC-APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
Y+ L++GLCK+ A M+ +G P+ TY LI L KE K +EA +L M
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID-----LYG 434
+ G+ PD Y +I G C A L M+ + P + WN+ + + G
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 435 RCKDVSNAILTRDLMLKF-GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
C + + T L ++ G+ V T +L+ K G +A L +E++T G P
Sbjct: 384 LCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSK 443
Query: 494 VTYNLLIG 501
T+ LLIG
Sbjct: 444 GTWKLLIG 451
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 16/359 (4%)
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN- 260
+M +F P+ Y T++ N ++ A Y +M + G+ P + N+L+ ALC N
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
G + K+ E+ D PD T + + +A L+ EM + VV
Sbjct: 171 GTVDAGLKIFLEMPKRGCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
Y LINGLC ++ ++ A Y EM KG+ P+ FTY+ L+ L K+G++ +A + +M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
G P+ ++Y +I GLC ++ I A ELL M + P ++ +I +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGN----------IYRAYSLKEEMLTKGLF 490
A D M+ G+ PN T+N HVK+ N RA++L M ++G+
Sbjct: 350 EAANFLDEMILGGITPNRLTWN----IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGIS 405
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+V T L+ C A+QL E+V G P ++ L+ + + EA +
Sbjct: 406 VEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASD 464
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 147/291 (50%), Gaps = 11/291 (3%)
Query: 148 VRLLCL-EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
++ LC +G ++A +++ M ++G PD +T+ +++GLC+ G +++A L EM+E
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK-LFTEMVEK 221
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
P +VTY +LI G C +VD+A+ M GI+PN T + L+ LC++G +A
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++ E ++ P++VT T + K ++ +A L + M ++ D Y +I+
Sbjct: 282 MELFEMMMARGCR-PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI-------LIGALWKEGKTREACYILGVM 379
G C A + EM+ G+ P+ T+NI ++ L +R L +
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMR 400
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
S+ GI + + + +++ LC + +A +L+ ++ + +P W L+I
Sbjct: 401 SR-GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 16/302 (5%)
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+R F + ++++M+ + AY ++ L + +NLA+ + M + G+ P +
Sbjct: 100 HRPF-DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVAS 158
Query: 356 YNILIGALWK-EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
N+LI AL + +G I M K G PD +Y +I GLC I AK+L M
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ P + + +I+ K+V A+ + M G+ PNVFTY++L+ K G
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
+A L E M+ +G P++VTY LI C + A++L M +G +PD Y ++
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEE----------PVKAFN 584
+ C +EA A L ++ P ++ +N++ K P +AF
Sbjct: 339 ISGFCAISKFREA----ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFT 394
Query: 585 LF 586
L+
Sbjct: 395 LY 396
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 17/301 (5%)
Query: 118 LKMMRENISLVKIGLRGY------ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKG 171
+K + N V GL+ + C+ + + LC G+++ A +L MV+K
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 172 FLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKA 231
P V T+ ++NGLC +++A +L EM G PN+ TY++L+ G C +A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYL-EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 232 LYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMD 291
+ L+ M G +PN VT L+ LC+ ++EA ++L+ +N PD +
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR-MNLQGLKPDAGLYGKVIS 340
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV-------LINGLCKNQLMNLAYGYACEM 344
+ +F +A + +EM + + + +N+ ++ GLC N + A+ M
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSM 399
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
+G+ + T L+ L K+G+ ++A ++ + G +P + ++K++I G D+ I
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI-GHTLDKTI 458
Query: 405 V 405
V
Sbjct: 459 V 459
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 449 MLKFGVHPNVFTYNALILAHVKS-GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M + G+ P V + N LI A ++ G + + EM +G PD TY LI C
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS-GLMNDHVPV 566
D A +L EMV+K P +++YT L+ C N EA RY + +KS G+ +
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA-MRYLEEMKSKGIEPNVFTY 265
Query: 567 QILFNMYCKLEEPVKAFNLFQ 587
L + CK ++A LF+
Sbjct: 266 SSLMDGLCKDGRSLQAMELFE 286
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 37/289 (12%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+G+++ A+R R M + P+ +T N +++G C+ G ++K + L+++M G V
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE-LLQDMERLGFRATDV 274
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+YNTLI G+C + AL L + M +G+QPN VT N L+H C L+EA K
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK----- 329
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ EM+ ++ + V YN LING +
Sbjct: 330 -------------------------------VFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+A+ + +M+ G+ D TYN LI L K+ KTR+A + + K +VP+ ++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
+I G C ++ R EL M+ + P +N+++ + R +D A
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 153/344 (44%), Gaps = 11/344 (3%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
+VNG V L K D L+ E P + +++L K + + A + M D
Sbjct: 142 LVNG--GVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G P +CN + +L G + A + E + K P+ T + M Y ++ + +
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYRE-MRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
L +M + V+YN LI G C+ L++ A M K G+ P+ T+N LI
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ K +EA + G M + + P+ ++Y +I G D A M+ N +
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 422 KPIVWNLIIDLYGRCKDVSN---AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ +N +I +G CK A ++L K + PN T++ALI+ N R +
Sbjct: 377 DILTYNALI--FGLCKQAKTRKAAQFVKELD-KENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
L + M+ G P+ T+N+L+ A C D A Q+ REMV++
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 19/348 (5%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEIL-NDDKDIPDLV-------------TSTVFMDHYF 294
T I++H L +N K A+ +L ++L N D+P V T VF D F
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF-DSLF 175
Query: 295 KN----REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
K ++F A + +M+ V + N ++ L +++A + EM + +
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ +T N+++ + GK + +L M ++G ++SY +I G C + A +L
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL 295
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M + + P + +N +I + R + A M V PN TYN LI + +
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
G+ A+ E+M+ G+ D++TYN LI C A Q +E+ ++ P+ +
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEE 578
++ L+ C+R N E Y +++SG + +L + +C+ E+
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G L +A++L+ +M + G P+V T N +++G C+ +++A + EM PN
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK-VFGEMKAVNVAPN 342
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
VTYNTLI GY + A Y M GIQ + +T N L+ LC+ ++A + ++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E L+ + +P+ T + + + + F L+ M ++ + +N+L++ C+N
Sbjct: 403 E-LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ + A EM+++ + D+ T + + L +GK
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
P V++ + + K NA T M +G P V + NA + + + G + A
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
EM + P+ T N+++ C D ++L ++M + G R +SY L+ C +G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYC---KLEEPVKAF 583
A + + KSGL + V L + +C KL+E K F
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 37/289 (12%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+G+++ A+R R M + P+ +T N +++G C+ G ++K + L+++M G V
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE-LLQDMERLGFRATDV 274
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+YNTLI G+C + AL L + M +G+QPN VT N L+H C L+EA K
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK----- 329
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ EM+ ++ + V YN LING +
Sbjct: 330 -------------------------------VFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+A+ + +M+ G+ D TYN LI L K+ KTR+A + + K +VP+ ++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
+I G C ++ R EL M+ + P +N+++ + R +D A
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 153/344 (44%), Gaps = 11/344 (3%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
+VNG V L K D L+ E P + +++L K + + A + M D
Sbjct: 142 LVNG--GVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G P +CN + +L G + A + E + K P+ T + M Y ++ + +
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYRE-MRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
L +M + V+YN LI G C+ L++ A M K G+ P+ T+N LI
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ K +EA + G M + + P+ ++Y +I G D A M+ N +
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 422 KPIVWNLIIDLYGRCKDVSN---AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ +N +I +G CK A ++L K + PN T++ALI+ N R +
Sbjct: 377 DILTYNALI--FGLCKQAKTRKAAQFVKELD-KENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
L + M+ G P+ T+N+L+ A C D A Q+ REMV++
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 19/348 (5%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEIL-NDDKDIPDLV-------------TSTVFMDHYF 294
T I++H L +N K A+ +L ++L N D+P V T VF D F
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF-DSLF 175
Query: 295 KN----REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
K ++F A + +M+ V + N ++ L +++A + EM + +
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ +T N+++ + GK + +L M ++G ++SY +I G C + A +L
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL 295
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M + + P + +N +I + R + A M V PN TYN LI + +
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
G+ A+ E+M+ G+ D++TYN LI C A Q +E+ ++ P+ +
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEE 578
++ L+ C+R N E Y +++SG + +L + +C+ E+
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C +G L +A++L+ +M + G P+V T N +++G C+ +++A + EM PN
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK-VFGEMKAVNVAPN 342
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
VTYNTLI GY + A Y M GIQ + +T N L+ LC+ ++A + ++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E L+ + +P+ T + + + + F L+ M ++ + +N+L++ C+N
Sbjct: 403 E-LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ + A EM+++ + D+ T + + L +GK
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
P V++ + + K NA T M +G P V + NA + + + G + A
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
EM + P+ T N+++ C D ++L ++M + G R +SY L+ C +G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYC---KLEEPVKAF 583
A + + KSGL + V L + +C KL+E K F
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 175/377 (46%), Gaps = 6/377 (1%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD T++ ++N + G A + L+ +ML P+ TYN LI + + +AL
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMN-LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+ M D G+ P+ VT NI++ A +A E ++ K PD T + +
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCL 161
Query: 294 FKNREFIQAFSLWNEMRQNSMEV--DVVAYNVLINGLC-KNQLMNLAYGYACEMLKKGVL 350
K + QA L+N MR+ E DVV + +++ K ++ N + M+ +G+
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA-MVAEGLK 220
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ +YN L+GA G + A +LG + + GI+PD +SY ++ R +AKE+
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M P + +N +ID YG ++ A+ M + G+ PNV + L+ A +
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
S ++ ++G+ + YN IG+ N + A+ L + M +K + D ++
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 531 YTELVRESCIRGNTKEA 547
+T L+ SC EA
Sbjct: 401 FTILISGSCRMSKYPEA 417
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 200/456 (43%), Gaps = 2/456 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ ++C+ + A + G+ A+ L M++ P T+N+++N G
Sbjct: 37 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+A + + ++M + G P+LVT+N ++ Y + KAL + M ++P+ T N
Sbjct: 97 WREALE-VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
I+++ L + G +A + + + PD+VT T M Y E +++ M
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ ++V+YN L+ + + A ++ + G++PD +Y L+ + + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+A + +M K P+ ++Y +I + + A E+ M + + P + ++
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
R K N G++ N YN+ I +++ + + +A +L + M K +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
D VT+ +LI +C + + A+ +EM Y+ ++ +G EAE
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ ++ +G D + + + Y E+ KA LF
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 19/344 (5%)
Query: 111 LKGSLERLKMMRENISLVKIGLRGYACEY-----SYTEHAATVRLLCLEGKLEAAIRLQR 165
+KG +E + + E ++V GL+ Y +Y H + L + G ++
Sbjct: 200 VKGEIENCRAVFE--AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK------- 250
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
Q G +PDV ++ ++N + KA + + M + PN+VTYN LI Y +
Sbjct: 251 ---QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM-MRKERRKPNVVTYNALIDAYGSN 306
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
+ +A+ ++ M GI+PN V+ L+ A + +L + ++
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
++ + Y E +A +L+ MR+ ++ D V + +LI+G C+ A Y EM
Sbjct: 367 NSA-IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ Y+ ++ A K+G+ EA I M G PD I+Y M+
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
+A EL M N + P I + ++ + + SN + DLM
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
YN++I ++ ++ A G EM K PDA TY+ LI A + G+ R A ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
+ I P +Y +I + A E+ M +N + P + N+++ Y + S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL--FPDVVTYNL 498
A+ +LM V P+ T+N +I K G +A L M K PDVVT+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 499 LI------GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYA 552
++ G N R+ + MV +G +P+++SY L+ + G + A
Sbjct: 194 IMHLYSVKGEIENCRA------VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 553 KILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
I ++G++ D V L N Y + +P KA +F
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 166/391 (42%), Gaps = 38/391 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L A+ + R M Q G P+V + ++ C + D ++ G N
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN+ I Y ++KA+ LY SM ++ + VT IL+ C EA L+E+
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM- 424
Query: 275 NDDKDIPDLVTSTVFMD---HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+D IP +T V+ Y K + +A S++N+M+ E DV+AY +++ +
Sbjct: 425 -EDLSIP--LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 332 QLMNLAYGYAC----EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
+ +G AC EM G+ PD+ + L+ A K G+ ++ +M + I
Sbjct: 482 E----KWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT 537
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+ + ++ RA +L+ M L + N ++ L+G+ V +
Sbjct: 538 GAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFY 597
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAY-SLKEEMLTKGLFPDVVTYNLLIGAACNL 506
++ GV N+ TY A++L H+ + +R Y + E M G+ P
Sbjct: 598 KIIASGVGINLKTY-AILLEHLLAVGNWRKYIEVLEWMSGAGIQP--------------- 641
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+ Q+ R+++ G R I + L+R+
Sbjct: 642 -----SNQMYRDIISFGERSAGIEFEPLIRQ 667
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 175/375 (46%), Gaps = 3/375 (0%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D + +V G K+GL+E+ + RE+L+ G ++VT N L+ G ++ ++ +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFR-VFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
YS M GI PN T NIL + C + + +E LE++ + + PDLVT + Y
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFE-PDLVTYNTLVSSYC 282
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
+ +AF L+ M + + D+V Y LI GLCK+ + A+ M+ +G+ PD
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
+YN LI A KEG +++ +L M +VPD + KV++ G + ++ A + +
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 415 LN-NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
+ +P + LI+ L K + L ++ + G TYN LI + +
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDA 462
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
I A LK ++ + D TY LIG C + + A L EM +PD
Sbjct: 463 IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGA 522
Query: 534 LVRESCIRGNTKEAE 548
LV C + +AE
Sbjct: 523 LVYGYCKELDFDKAE 537
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 11/429 (2%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE-MLEFGPLPNLV 213
G +E R+ R ++ GF V T NH++NGL K+ LME W V M G PN
Sbjct: 180 GLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDC--WQVYSVMCRVGIHPNTY 237
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
T+N L +C ++ + M + G +P+ VT N LV + C G LKEA L +I
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA-FYLYKI 296
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + +PDLVT T + K+ +A ++ M ++ D ++YN LI CK +
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI-VPDEISYK 392
M + EML V+PD FT +++ +EG+ A + + ++ + +P E+
Sbjct: 357 MQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC-D 415
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNL-MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I LC + AK LL ++ KP +N +I+ RC + A++ + +
Sbjct: 416 FLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKN 475
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
+ TY ALI + G A SL EM + PD L+ C D
Sbjct: 476 QNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDK 535
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRG-NTKEAEERYAKILKSGLMNDHVPVQILF 570
A +L + D SY LV+ C G K+A E ++ + G + + + + L
Sbjct: 536 AERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Query: 571 NMYCKLEEP 579
+ LE+P
Sbjct: 596 QV---LEQP 601
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 6/317 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C G+L+ A L +IM ++ +PD+ T+ ++ GLCK G + +AH R M++ G P+
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR-MVDRGIKPD 340
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
++YNTLI YC + ++ L M + P+R TC ++V G L A +
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E+ DIP V + + + + F L + + E YN LI L +
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ A ++ + + DA TY LIG L + G+ REA ++ M + PD
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD---VSNAILTRDL 448
++ G C + D +A+ LL + P +N ++ C+ A+ ++
Sbjct: 521 GALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVK--AVCETGCGYKKALELQER 578
Query: 449 MLKFGVHPNVFTYNALI 465
M + G PN T LI
Sbjct: 579 MQRLGFVPNRLTCKYLI 595
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 25/301 (8%)
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI--LNDDKDIPD----LVTST------ 287
D G +PN +L+H L + A + L E+ L K+ D LV++T
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWD 165
Query: 288 -----VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
+ + Y K + F ++ E+ + V VV N L+NGL K LM +
Sbjct: 166 PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYS 225
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
M + G+ P+ +T+NIL + RE L M + G PD ++Y ++ C
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFT 460
+ A L M +VP + + +I G CKD V A T M+ G+ P+ +
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIK--GLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN----LRSHDFALQLR 516
YN LI A+ K G + ++ L EML + PD T +++ L + +F ++LR
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Query: 517 R 517
R
Sbjct: 404 R 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
D V +++L+ G K L+ + E+L G T N L+ L K + +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
VM ++GI P+ ++ ++ C D + + L
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFL------------------------- 259
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
+ M + G P++ TYN L+ ++ + G + A+ L + M + + PD+VTY
Sbjct: 260 ----------EKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTY 309
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
LI C A Q MV +G +PD +SY L+ C G +++++ ++L
Sbjct: 310 TSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG 369
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+ ++ D +++ + + + A N + K D
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD 408
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 175/377 (46%), Gaps = 6/377 (1%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD T++ ++N + G A + L+ +ML P+ TYN LI + + +AL
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMN-LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+ M D G+ P+ VT NI++ A +A E ++ K PD T + +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCL 293
Query: 294 FKNREFIQAFSLWNEMRQNSMEV--DVVAYNVLINGLC-KNQLMNLAYGYACEMLKKGVL 350
K + QA L+N MR+ E DVV + +++ K ++ N + M+ +G+
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA-MVAEGLK 352
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+ +YN L+GA G + A +LG + + GI+PD +SY ++ R +AKE+
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M P + +N +ID YG ++ A+ M + G+ PNV + L+ A +
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
S ++ ++G+ + YN IG+ N + A+ L + M +K + D ++
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 531 YTELVRESCIRGNTKEA 547
+T L+ SC EA
Sbjct: 533 FTILISGSCRMSKYPEA 549
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 204/462 (44%), Gaps = 14/462 (3%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ ++C+ + A + G+ A+ L M++ P T+N+++N G
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+A + + ++M + G P+LVT+N ++ Y + KAL + M ++P+ T N
Sbjct: 229 WREALE-VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
I+++ L + G +A + + + PD+VT T M Y E +++ M
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ ++V+YN L+ + + A ++ + G++PD +Y L+ + + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+A + +M K P+ ++Y +I + + A E+ M + + P + ++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
R K N G++ N YN+ I +++ + + +A +L + M K +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL-ISYTELVRESCI-----RGNT 544
D VT+ +LI +C + + A+ +EM DL I T+ V S + +G
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEM------EDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
EAE + ++ +G D + + + Y E+ KA LF
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 19/344 (5%)
Query: 111 LKGSLERLKMMRENISLVKIGLRGYACEY-----SYTEHAATVRLLCLEGKLEAAIRLQR 165
+KG +E + + E ++V GL+ Y +Y H + L + G ++
Sbjct: 332 VKGEIENCRAVFE--AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK------- 382
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
Q G +PDV ++ ++N + KA + + M + PN+VTYN LI Y +
Sbjct: 383 ---QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM-MRKERRKPNVVTYNALIDAYGSN 438
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
+ +A+ ++ M GI+PN V+ L+ A + +L + ++
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
++ + Y E +A +L+ MR+ ++ D V + +LI+G C+ A Y EM
Sbjct: 499 NSA-IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ Y+ ++ A K+G+ EA I M G PD I+Y M+
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
+A EL M N + P I + ++ + + SN + DLM
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
YN++I ++ ++ A G EM K PDA TY+ LI A + G+ R A ++ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
+ I P +Y +I + A E+ M +N + P + N+++ Y + S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL--FPDVVTYNL 498
A+ +LM V P+ T+N +I K G +A L M K PDVVT+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 499 LI------GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYA 552
++ G N R+ + MV +G +P+++SY L+ + G + A
Sbjct: 326 IMHLYSVKGEIENCRA------VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 553 KILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
I ++G++ D V L N Y + +P KA +F
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 166/391 (42%), Gaps = 38/391 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L A+ + R M Q G P+V + ++ C + D ++ G N
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN+ I Y ++KA+ LY SM ++ + VT IL+ C EA L+E+
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM- 556
Query: 275 NDDKDIPDLVTSTVFMD---HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+D IP +T V+ Y K + +A S++N+M+ E DV+AY +++ +
Sbjct: 557 -EDLSIP--LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 332 QLMNLAYGYAC----EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
+ +G AC EM G+ PD+ + L+ A K G+ ++ +M + I
Sbjct: 614 E----KWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT 669
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+ + ++ RA +L+ M L + N ++ L+G+ V +
Sbjct: 670 GAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFY 729
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAY-SLKEEMLTKGLFPDVVTYNLLIGAACNL 506
++ GV N+ TY A++L H+ + +R Y + E M G+ P
Sbjct: 730 KIIASGVGINLKTY-AILLEHLLAVGNWRKYIEVLEWMSGAGIQP--------------- 773
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRE 537
+ Q+ R+++ G R I + L+R+
Sbjct: 774 -----SNQMYRDIISFGERSAGIEFEPLIRQ 799
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 184/418 (44%), Gaps = 42/418 (10%)
Query: 173 LPDVFTH--NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
P + T N VN LCK +E+A L+ + + G LP+++TYNTLIKGY +D+
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETLLI-DGIRLGVLPDVITYNTLIKGYTRFIGIDE 66
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A + M + GI+P+ T N L+ +N L ++ +E+L+ PD+ + M
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLS-PDMWSYNTLM 125
Query: 291 DHYFKNREFIQAFSLWNE-MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
YFK +AF + +E + + + YN+L++ LCK+ + A + LK V
Sbjct: 126 SCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHLKSRV 184
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
P+ TYNILI L K + +++ + K G P+ ++Y M++
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK------------- 231
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+Y + K + + M K G + F A++ A +
Sbjct: 232 ----------------------MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALI 269
Query: 470 KSGNIYRAYSLKEEMLTKGLFP-DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
K+G AY E++ G D+V+YN L+ + D L E+ KG +PD
Sbjct: 270 KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
++T +V GNT AE+ A I + G+ V L + CK +A LF
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 19/403 (4%)
Query: 147 TVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
+V LC LE A L ++ G LPDV T+N ++ G + +++A+ + R M E
Sbjct: 19 SVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY-AVTRRMREA 77
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G P++ TYN+LI G +++ L L+ M +G+ P+ + N L+ + G EA
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
K+L E ++ +P + T + +D K+ A L+ ++ + ++ +++ YN+LIN
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILIN 196
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
GLCK++ + E+ K G P+A TY ++ +K + + + M K G
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCM---LNNLMVPKPIV-WNLIIDLY---GRCKDV 439
D + ++ L RA+E CM + + + IV +N +++LY G V
Sbjct: 257 DGFANCAVVSALI---KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ L ++ +K G+ P+ +T+ ++ + GN A + G+ P VVT N L
Sbjct: 314 DD--LLEEIEMK-GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
I C D A++L M + D +YT +V C G
Sbjct: 371 IDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+ G+M GI ++ + + LC R++ RA+ LL + ++P I +N +I Y
Sbjct: 2 VRGLMKFPGISTKLLN--ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT 59
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
R + A M + G+ P+V TYN+LI K+ + R L +EML GL PD+
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMW 119
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQ-KGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
+YN L+ L H A ++ E + G P + +Y L+ C G+T A E + K
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-K 178
Query: 554 ILKSGLMNDHVPVQILFNMYCK 575
LKS + + + IL N CK
Sbjct: 179 HLKSRVKPELMTYNILINGLCK 200
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+G L+A L + KG PD +TH IVNGL +G A L + E G P++V
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLAC-IGEMGMQPSVV 365
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
T N LI G C VD+A+ L++SM + T +VH LC++G L A K+L
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSC 421
Query: 274 LNDDKDIP 281
N IP
Sbjct: 422 YNKGMKIP 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
N+ RA +L + + G+ PDV+TYN LI D A + R M + G PD+ +Y
Sbjct: 28 NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYN 87
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
L+ + + + ++L SGL D L + Y KL +AF + +
Sbjct: 88 SLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE 143
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 189/437 (43%), Gaps = 45/437 (10%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW--LVREMLEFGPLPNLVTYNTLIK 220
R M+ G DV+T+ ++ GL L + D L++ M G PN V YNTL+
Sbjct: 169 FTRKMMASGIHGDVYTYGILMKGL---SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 221 GYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI 280
C V +A L S M +PN VT NIL+ A C L ++ +LE+ + +
Sbjct: 226 ALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF-V 280
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PD+VT T M+ +A + + +VDVVA N L+ G C M +A +
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
EM +KG LP+ TYN+LI G A M I + ++ +IRGL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIV--WNLII--------------------DLYGRCKD 438
++L M ++ V + +N +I L+ R D
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 439 VSNAILT-------------RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
S +++ D M+ G P++ + LI + + G I + L +M+
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
T+G P T+N +I C ++ +M ++G PD SY L+ E C++G+ +
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 546 EAEERYAKILKSGLMND 562
+A ++++++ ++ D
Sbjct: 581 KAWLLFSRMVEKSIVPD 597
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 201/477 (42%), Gaps = 54/477 (11%)
Query: 98 KGQHAVFNA-LDNMLKGSLERLKMMRENIS--LVKIGLRGYACEYSYTEHAATVRLLCLE 154
K VFN+ LD ++K E + + RE + ++ G+ G Y+Y ++ L L
Sbjct: 144 KPSLKVFNSILDVLVK---EDIDIAREFFTRKMMASGIHGDV--YTY---GILMKGLSLT 195
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
++ +L +IM G P+ +N +++ LCK G + +A L+ EM E PN VT
Sbjct: 196 NRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARS-LMSEMKE----PNDVT 250
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+N LI YC + +++ L G P+ VT ++ LC G + EA ++LE +
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ + D+V + Y + A + EM + +V YN+LI G C ++
Sbjct: 311 SKGGKV-DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGML 369
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV--------- 385
+ A +M + + T+N LI L G+T + IL +M V
Sbjct: 370 DSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN 429
Query: 386 ------------PDEISYKVMIRGLCFDRDIVRAKELL-WC--------------MLNNL 418
D + + + + L F R + R+ +L+ C M+
Sbjct: 430 CVIYGFYKENRWEDALEFLLKMEKL-FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
VP IV + +I Y + + ++ + M+ G P T+NA+I+ K +
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGI 548
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
E+M +G PD +YN L+ C A L MV+K PD ++ L+
Sbjct: 549 KFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 40/377 (10%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
GF+ T+ + + LC + + L G P+ + T+I+G+ + +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
+ + ++ GI+P+ LK +L+ ++ +D DI
Sbjct: 131 VISVVDLVSKFGIKPS----------------LKVFNSILDVLVKEDIDIA--------- 165
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
REF +M + + DV Y +L+ GL + + M GV
Sbjct: 166 ------REFFT-----RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVA 214
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+A YN L+ AL K GK A ++ M + P+++++ ++I C ++ ++++ L
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVL 270
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
L + VP + ++++ VS A+ + + G +V N L+ +
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
G + A EM KG P+V TYNLLI C++ D AL +M R + +
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 531 YTELVRESCIRGNTKEA 547
+ L+R I G T +
Sbjct: 391 FNTLIRGLSIGGRTDDG 407
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 135/310 (43%), Gaps = 4/310 (1%)
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G +R T L H LC ++L+E+ + PD + + + R +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
S+ + + + ++ + +N +++ L K + + +M+ G+ D +TY IL+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
L + + +L +M G+ P+ + Y ++ LC + + RA+ L ++ + P
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSL----MSEMKEP 246
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ +N++I Y + + +++ + G P+V T ++ G + A +
Sbjct: 247 NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL 306
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
E + +KG DVV N L+ C L A + EM +KG+ P++ +Y L+ C
Sbjct: 307 ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDV 366
Query: 542 GNTKEAEERY 551
G A + +
Sbjct: 367 GMLDSALDTF 376
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 201/436 (46%), Gaps = 5/436 (1%)
Query: 102 AVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAI 161
+V A+ + L +L R KM+ + +S V +G C+ + + + + + +L EG+ E
Sbjct: 159 SVSPAVLSELVKALGRAKMVSKALS-VFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 162 RLQRIMVQKG-FLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+ M +G PD T++ +++ K+G + A L EM + P Y TL+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR-LFDEMKDNCMQPTEKIYTTLLG 276
Query: 221 GYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI 280
Y V V+KAL L+ M G P T L+ L + G + EA +++L D
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL-T 335
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL-MNLAYG 339
PD+V M+ K + ++++EM VV+YN +I L +++ ++
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
+ +M V P FTY+ILI K + +A +L M + G P +Y +I L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
+ A EL + N V+ ++I +G+C +S A+ + M G P+V+
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
YNAL+ VK+G I A SL +M G D+ ++N+++ A+++ +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 520 VQKGHRPDLISYTELV 535
G +PD ++Y L+
Sbjct: 576 KHSGIKPDGVTYNTLL 591
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 15/359 (4%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK+E A+ L M + G P V+T+ ++ GL K G +++A+ + ++ML G P++V
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY-KDMLRDGLTPDVVF 340
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN-GHLKEAKKMLEEI 273
N L+ V V++ ++S M P V+ N ++ AL E+ H+ E +++
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D P T ++ +D Y K +A L EM + AY LIN L K +
Sbjct: 401 KADSVS-PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK- 458
Query: 334 MNLAYGYACEMLKKGVLPDAF------TYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
Y A E+ K+ L + F Y ++I K GK EA + M G PD
Sbjct: 459 ---RYEAANELFKE--LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+Y ++ G+ I A LL M N N+I++ + R AI +
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ G+ P+ TYN L+ +G A + EM KG D +TY+ ++ A N+
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 170/405 (41%), Gaps = 8/405 (1%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P T+N ++ L + G EK H+ E P+ +TY+ LI Y + D A+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
L+ M D +QP L+ + G +++A + EE+ P + T T +
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS-PTVYTYTELIKGL 313
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K +A+ + +M ++ + DVV N L+N L K + EM P
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 354 FTYNILIGALWK-EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
+YN +I AL++ + E M + P E +Y ++I G C + +A LL
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNA-ILTRDLMLKFG-VHPNVFTYNALILAHV- 469
M P P + +I+ G+ K A L ++L FG V V+ A+++ H
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY---AVMIKHFG 490
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K G + A L EM +G PDV YN L+ + A L R+M + G R D+
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYC 574
S+ ++ G + A E + I SG+ D V L +
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 12/290 (4%)
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+R + V + L+ L + ++++ A + + P + TYN +I L +EG+
Sbjct: 153 VRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 369 TREACYILGVMSKMG-IVPDEISYKVMIRG---LCFDRDIVRAKELLWCMLNNLMVPKPI 424
+ + M G PD I+Y +I L + +R L M +N M P
Sbjct: 213 HEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR---LFDEMKDNCMQPTEK 269
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
++ ++ +Y + V A+ + M + G P V+TY LI K+G + AY ++M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR---ESCIR 541
L GL PDVV N L+ + + + EM P ++SY +++ ES +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES--K 387
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ E + K+ + IL + YCK KA L ++ E
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 36/353 (10%)
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+M++ G P++VT ++L+ G+C NS+ A+Y+ M GI+ + V IL+ LC+N
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN- 61
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
R + A + M+ + +VV Y
Sbjct: 62 -----------------------------------RLVVPALEVLKRMKDRGISPNVVTY 86
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
+ LI GLCK+ + A EM K + P+ T++ LI A K GK + + +M +
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
M I P+ +Y +I GLC + A ++L M++ P + ++ + + + + V +
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
I D M + GV N + N LI + ++G I A + M + GL P++ +YN+++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
+ AL M + + D+I+YT ++ C KEA + + K+
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKL 319
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 4/336 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ G PD+ T + +VNG C ++ A ++ +M + G ++V LI C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAV-YVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVT 285
V AL + M D GI PN VT + L+ LC++G L +A++ L E+ D K I P+++T
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM--DSKKINPNVIT 120
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ +D Y K + + S++ M Q S++ +V Y+ LI GLC + ++ A M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
KG P+ TY+ L +K + + +L M + G+ + +S +I+G I
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
A + M +N ++P +N+++ +V A+ + M K ++ TY +I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
K+ + AY L ++ K + PD Y ++I
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC + A+ + + M +G P+V T++ ++ GLCK G + A L EM P
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL-HEMDSKKINP 116
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N++T++ LI Y + K +Y M I PN T + L++ LC + + EA KML
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ +++ P++VT + + +FK+ L ++M Q + + V+ N LI G +
Sbjct: 177 DLMISKGC-TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++LA G M G++P+ +YNI++ L+ G+ +A M K D I+
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 391 YKVMIRGLC 399
Y +MI G+C
Sbjct: 296 YTIMIHGMC 304
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 153/350 (43%), Gaps = 38/350 (10%)
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP-DLVTSTVFMDHYFKN 296
M GI+P+ VT + LV+ C + +K+A + ++ + I D+V T+ +D KN
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM--EKMGIKRDVVVDTILIDTLCKN 61
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
R + A + M+ + +VV Y+ LI GLCK+ + A EM K + P+ T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+ LI A K GK + + +M +M I P+ +Y +I GLC
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC----------------- 164
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
++ R V AI DLM+ G PNV TY+ L KS +
Sbjct: 165 ---------------MHNR---VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
L ++M +G+ + V+ N LI D AL + M G P++ SY ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
G ++A R+ + K+ D + I+ + CK +A++LF
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
GKL + ++M+Q P+VFT++ ++ GLC +++A L M+ G PN+V
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGCTPNVV 189
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY+TL G+ + VD + L M G+ N V+CN L+ + G + A +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG-Y 248
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + IP++ + + + F N E +A S + M++ ++D++ Y ++I+G+CK +
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+ AY ++ K V PD Y I+I L + G EA
Sbjct: 309 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%)
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
+M + +E D+V + L+NG C + + A A +M K G+ D ILI L K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
A +L M GI P+ ++Y +I GLC + A+ L M + + P I ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
+ID Y + +S +M++ + PNVFTY++LI + A + + M++K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 488 GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
G P+VVTY+ L D ++L +M Q+G + +S L++ G A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 548 EERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+ + +GL+ + I+ E KA + F+ +++ D
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 7/314 (2%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY T++ + L M G +PN VT N L+H+ +LKEA + ++
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ PD VT +D + K A ++ M++ + D Y+V+IN L K
Sbjct: 421 QEAGCE-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ CEM+ +G P+ T+NI+I K A + M G PD+++Y +
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ L + A+ + M VP V+ L++DL+G+ +V A ML+ G
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH---D 510
+ PNV T N+L+ ++ + AY+L + ML GL P + TY LL+ + RS+
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG 659
Query: 511 FALQLRREMVQKGH 524
F QL M GH
Sbjct: 660 FCGQL---MAVSGH 670
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMV 168
N L S R ++E +++ ++ CE + + + G L+ A+ + + M
Sbjct: 398 NRLIHSYGRANYLKEAMNVFN-QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
+ G PD FT++ I+N L K G + AH L EM+ G PNLVT+N +I + +
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHR-LFCEMVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
+ AL LY M + G QP++VT +I++ L G L+EA+ + E+ + +PD +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW-VPDEPVYGL 574
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+D + K +A+ + M Q + +V N L++ + M+ AY ML G
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
Query: 349 VLPDAFTYNILI 360
+ P TY +L+
Sbjct: 635 LHPSLQTYTLLL 646
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 290 MDHYFKNREFIQAFSLWNEM-------RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
MD Y N+ Q + N + RQ + D Y ++ L + +
Sbjct: 324 MDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLD 383
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
EM++ G P+ TYN LI + + +EA + M + G PD ++Y +I
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI------- 436
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
DI L ++ +D+Y R M + G+ P+ FTY+
Sbjct: 437 DIHAKAGFL---------------DIAMDMYQR-------------MQEAGLSPDTFTYS 468
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
+I K+G++ A+ L EM+ +G P++VT+N++I R+++ AL+L R+M
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 523 GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
G +PD ++Y+ ++ G +EAE +A++ + + D +L +++ K KA
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 583 FNLFQDWLES 592
+ +Q L++
Sbjct: 589 WQWYQAMLQA 598
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
D T T + + + ++F + L +EM ++ + + V YN LI+ + + A
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+M + G PD TY LI K G A + M + G+ PD +Y V+I L
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFT 460
+ A L M+ P + +N++I L+ + ++ A+ L RD M G P+ T
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD-MQNAGFQPDKVT 536
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI---GAACNLRSHDFALQLRR 517
Y+ ++ G + A + EM K PD Y LL+ G A N+ D A Q +
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV---DKAWQWYQ 593
Query: 518 EMVQKGHRPDLISYTELV 535
M+Q G RP++ + L+
Sbjct: 594 AMLQAGLRPNVPTCNSLL 611
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY T++ L M G QPN VT N L+H+ +L EA + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ- 424
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + PD VT +D + K A ++ M+ + D Y+V+IN L K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ CEM+ +G P+ TYNI++ K + A + M G PD+++Y +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ L + A+ + M +P V+ L++DL+G+ +V A ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH---D 510
+ PNV T N+L+ ++ I AY L + ML GL P + TY LL+ + RS
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Query: 511 FALQLRREMVQKGH 524
F QL M GH
Sbjct: 665 FCGQL---MASTGH 675
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 2/297 (0%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q GF D T+ +V L + A + L+ EM+ G PN VTYN LI Y N +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQF-GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
++A+ +++ M + G +P+RVT L+ + G L A M + + PD T +V
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS-PDTFTYSV 474
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
++ K A L+ EM ++V YN++++ K + A +M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
PD TY+I++ L G EA + M + +PDE Y +++ ++ +A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+ ML+ + P N ++ + R ++ A ML G+ P++ TY L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + + + G L+ A+ + + M G PD FT++ I+N L K G + A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
H L EM++ G PNLVTYN ++ + + AL LY M + G +P++VT +I++
Sbjct: 489 HK-LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
L G+L+EA+ + E+ + IPD + +D + K +A+ + M +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+V N L++ + + AY ML G+ P TY +L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
RQ + D Y ++ L + + EM++ G P+ TYN LI + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
EA + M + G PD ++Y +I DI L ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLI-------DIHAKAGFL---------------DIA 453
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
+D+Y R M G+ P+ FTY+ +I K+G++ A+ L EM+ +G
Sbjct: 454 MDMYQR-------------MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 490 FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
P++VTYN+++ R++ AL+L R+M G PD ++Y+ ++ G +EAE
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 550 RYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ ++ + + D +L +++ K KA+ +Q L +
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
D T T + + + ++F L +EM ++ + + V YN LI+ + +N A
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+M + G PD TY LI K G A + M G+ PD +Y V+I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFT 460
+ A +L M++ P + +N+++DL+ + ++ NA+ L RD M G P+ T
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVT 541
Query: 461 YNAL--ILAHV---------------------------------KSGNIYRAYSLKEEML 485
Y+ + +L H K+GN+ +A+ + ML
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
GL P+V T N L+ + A +L + M+ G RP L +YT L+ C G +K
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT-LLLSCCTDGRSK 660
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
L A+ + M + G PD T+ +++ K G ++ A D + + M G P+ TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD-MYQRMQAGGLSPDTFTYS 473
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+I + A L+ M D G PN VT NI++ + + + A K+ ++ N
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ PD VT ++ M+ +A +++ EM+Q + D Y +L++ K +
Sbjct: 534 GFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A+ + ML G+ P+ T N L+ + K EA +L M +G+ P +Y +++
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY T++ L M G QPN VT N L+H+ +L EA + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ- 424
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + PD VT +D + K A ++ M+ + D Y+V+IN L K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ CEM+ +G P+ TYNI++ K + A + M G PD+++Y +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ L + A+ + M +P V+ L++DL+G+ +V A ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH---D 510
+ PNV T N+L+ ++ I AY L + ML GL P + TY LL+ + RS
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Query: 511 FALQLRREMVQKGH 524
F QL M GH
Sbjct: 665 FCGQL---MASTGH 675
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 2/297 (0%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q GF D T+ +V L + A + L+ EM+ G PN VTYN LI Y N +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQF-GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
++A+ +++ M + G +P+RVT L+ + G L A M + + PD T +V
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS-PDTFTYSV 474
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
++ K A L+ EM ++V YN++++ K + A +M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
PD TY+I++ L G EA + M + +PDE Y +++ ++ +A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+ ML+ + P N ++ + R ++ A ML G+ P++ TY L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + + + G L+ A+ + + M G PD FT++ I+N L K G + A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
H L EM++ G PNLVTYN ++ + + AL LY M + G +P++VT +I++
Sbjct: 489 HK-LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
L G+L+EA+ + E+ + IPD + +D + K +A+ + M +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+V N L++ + + AY ML G+ P TY +L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
RQ + D Y ++ L + + EM++ G P+ TYN LI + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
EA + M + G PD ++Y +I DI L ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLI-------DIHAKAGFL---------------DIA 453
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
+D+Y R M G+ P+ FTY+ +I K+G++ A+ L EM+ +G
Sbjct: 454 MDMYQR-------------MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 490 FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
P++VTYN+++ R++ AL+L R+M G PD ++Y+ ++ G +EAE
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 550 RYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ ++ + + D +L +++ K KA+ +Q L +
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
D T T + + + ++F L +EM ++ + + V YN LI+ + +N A
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+M + G PD TY LI K G A + M G+ PD +Y V+I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFT 460
+ A +L M++ P + +N+++DL+ + ++ NA+ L RD M G P+ T
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVT 541
Query: 461 YNAL--ILAHV---------------------------------KSGNIYRAYSLKEEML 485
Y+ + +L H K+GN+ +A+ + ML
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
GL P+V T N L+ + A +L + M+ G RP L +YT L+ C G +K
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT-LLLSCCTDGRSK 660
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
L A+ + M + G PD T+ +++ K G ++ A D + + M G P+ TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD-MYQRMQAGGLSPDTFTYS 473
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+I + A L+ M D G PN VT NI++ + + + A K+ ++ N
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ PD VT ++ M+ +A +++ EM+Q + D Y +L++ K +
Sbjct: 534 GFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A+ + ML G+ P+ T N L+ + K EA +L M +G+ P +Y +++
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
TY T++ L M G QPN VT N L+H+ +L EA + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ- 424
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + PD VT +D + K A ++ M+ + D Y+V+IN L K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ CEM+ +G P+ TYNI++ K + A + M G PD+++Y +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ L + A+ + M +P V+ L++DL+G+ +V A ML G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH---D 510
+ PNV T N+L+ ++ I AY L + ML GL P + TY LL+ + RS
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
Query: 511 FALQLRREMVQKGH 524
F QL M GH
Sbjct: 665 FCGQL---MASTGH 675
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 2/297 (0%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q GF D T+ +V L + A + L+ EM+ G PN VTYN LI Y N +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQF-GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
++A+ +++ M + G +P+RVT L+ + G L A M + + PD T +V
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS-PDTFTYSV 474
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
++ K A L+ EM ++V YN++++ K + A +M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
PD TY+I++ L G EA + M + +PDE Y +++ ++ +A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+ ML+ + P N ++ + R ++ A ML G+ P++ TY L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + + + G L+ A+ + + M G PD FT++ I+N L K G + A
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
H L EM++ G PNLVTYN ++ + + AL LY M + G +P++VT +I++
Sbjct: 489 HK-LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
L G+L+EA+ + E+ + IPD + +D + K +A+ + M +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+V N L++ + + AY ML G+ P TY +L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 310 RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT 369
RQ + D Y ++ L + + EM++ G P+ TYN LI + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 370 REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
EA + M + G PD ++Y +I DI L ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLI-------DIHAKAGFL---------------DIA 453
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
+D+Y R M G+ P+ FTY+ +I K+G++ A+ L EM+ +G
Sbjct: 454 MDMYQR-------------MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 490 FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
P++VTYN+++ R++ AL+L R+M G PD ++Y+ ++ G +EAE
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 550 RYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ ++ + + D +L +++ K KA+ +Q L +
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
D T T + + + ++F L +EM ++ + + V YN LI+ + +N A
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+M + G PD TY LI K G A + M G+ PD +Y V+I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFT 460
+ A +L M++ P + +N+++DL+ + ++ NA+ L RD M G P+ T
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVT 541
Query: 461 YNAL--ILAHV---------------------------------KSGNIYRAYSLKEEML 485
Y+ + +L H K+GN+ +A+ + ML
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
GL P+V T N L+ + A +L + M+ G RP L +YT L+ C G +K
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT-LLLSCCTDGRSK 660
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
L A+ + M + G PD T+ +++ K G ++ A D + + M G P+ TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD-MYQRMQAGGLSPDTFTYS 473
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+I + A L+ M D G PN VT NI++ + + + A K+ ++ N
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ PD VT ++ M+ +A +++ EM+Q + D Y +L++ K +
Sbjct: 534 GFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A+ + ML G+ P+ T N L+ + K EA +L M +G+ P +Y +++
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 190/417 (45%), Gaps = 44/417 (10%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
K E A ++ M ++ D +T+ ++ + ++G ++A L EM+ G N+V
Sbjct: 249 AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAV-GLFNEMITEGLTLNVVG 307
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNTL++ VDKA+ ++S M +TG +PN T ++L++ L G L ++E
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE--- 364
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
R Q Y+ L+ L K +
Sbjct: 365 -------------------ISKRYMTQGI-----------------YSYLVRTLSKLGHV 388
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A+ C+M V + +Y ++ +L GKT EA +L + + G+V D + Y +
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
L + I +L M + P +N++I +GR +V AI + + +
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
P++ +YN+LI K+G++ A+ +EM KGL PDVVTY+ L+ + A
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568
Query: 515 LRREMVQKGHRPDLISYTELVRESCIR--GNTKEAEERYAKILKSGLMNDHVPVQIL 569
L EM+ KG +P++++Y L+ C+ G T EA + Y+K+ + GL D + +L
Sbjct: 569 LFEEMLVKGCQPNIVTYNILL--DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
++ ++ LC G +A + L + + E G + + + YNT+ + + L+
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNR 297
M G P+ T NIL+ + G + EA + EE+ D PD+++ ++ KN
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCK-PDIISYNSLINCLGKNG 526
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYN 357
+ +A + EM++ + DVV Y+ L+ K + + +AY EML KG P+ TYN
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
IL+ L K G+T EA + M + G+ PD I+Y V+ R
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 25/389 (6%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N TY L++ Y KA +Y + G + + N+L+ AL ++ ++A ++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVF 258
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E+ + D T T+ + + + +A L+NEM + ++VV YN L+ L K
Sbjct: 259 ED-MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 317
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++++ A M++ G P+ +TY++L+ L EG+ ++ G+V EIS
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ---------LVRLDGVV--EIS 366
Query: 391 YKVMIRGLC--FDRDI-----VRAKELLWCMLNNLMVP--KPIVWNLIIDLYGRCKDVSN 441
+ M +G+ R + V L+C + + V + +++ L G K +
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE- 425
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
AI + + GV + YN + A K I + L E+M G PD+ TYN+LI
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
+ + D A+ + E+ + +PD+ISY L+ G+ EA R+ ++ + GL
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 562 DHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
D V L + K E A++LF++ L
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEML 574
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 142/277 (51%), Gaps = 2/277 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G ++ A+R + M ++ PDV T N ++NG C+ + A D L REM E G PN+V+
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD-LFREMKEKGCEPNVVS 265
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+NTLI+G+ + +++ + + M + G + + TC ILV LC G + +A ++ ++L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
N + +P ++ + ++A + E+ + +A L+ GL K+
Sbjct: 326 N-KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRT 384
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A G+ +M+ G+LPD+ T+N+L+ L + +A + + S G PDE +Y V+
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
+ G + + L+ ML+ M+P +N ++D
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 145/333 (43%), Gaps = 38/333 (11%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P+V +N +VNG K G M+KA + R E P++ T+N LI GYC + D AL
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK-PDVCTFNILINGYCRSSKFDLALD 249
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
L+ M + G +PN V+ N L+ +G ++E KM E++
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI------------------- 290
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
E FS +L++GLC+ ++ A G ++L K VLP
Sbjct: 291 ----ELGCRFS-------------EATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
F Y L+ L E K A ++ + K G P I+ ++ GL +A +
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEK 393
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
M+N ++P + +NL++ ++A R L G P+ TY+ L+ K G
Sbjct: 394 MMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGR 453
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLI-GAACN 505
L EML K + PD+ TYN L+ G +C
Sbjct: 454 RKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCT 486
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 37/349 (10%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMAD-TGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+ + I YC +D AL + +M +PN N +V+ ++G + +A + +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR- 218
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ ++ PD+ T + ++ Y ++ +F A L+ EM++ E +VV++N LI G +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A EM++ G T IL+ L +EG+ +AC ++ + ++P E Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
++ LC + VRA E++ + + K G
Sbjct: 339 LVEKLCGENKAVRAMEMM-----------------------------------EELWKKG 363
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P L+ KSG +A E+M+ G+ PD VT+NLL+ C+ A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
+LR KG+ PD +Y LV G KE E ++L ++ D
Sbjct: 424 RLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C K + A+ L R M +KG P+V + N ++ G G +E+ + EM+E G +
Sbjct: 239 CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVK-MAYEMIELGCRFS 297
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
T L+ G C VD A L + + + P+ LV LC A +M+E
Sbjct: 298 EATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMME 357
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E+ + P + T ++ K+ +A +M + D V +N+L+ LC +
Sbjct: 358 ELWKKGQ-TPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSS 416
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
A KG PD TY++L+ KEG+ +E ++ M ++PD +Y
Sbjct: 417 DHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTY 476
Query: 392 KVMIRGLC----FDRDIVR 406
++ GL F R VR
Sbjct: 477 NRLMDGLSCTGKFSRKQVR 495
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ CE + +R GK+E +++ M++ G T +V+GLC+ G
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
++ A LV ++L LP+ Y +L++ C N +A+ + + G P + C
Sbjct: 314 VDDACG-LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
LV L ++G ++A +E+++N +PD VT + + + A L
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGI-LPDSVTFNLLLRDLCSSDHSTDANRLRLLASS 431
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
E D Y+VL++G K EML K +LPD FTYN L+ L GK
Sbjct: 432 KGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKF-GVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
++ ID Y R + + A+L D M + PNV YN ++ +VKSG++ +A +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
M + PDV T+N+LI C D AL L REM +KG P+++S+ L+R G
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
+E + ++++ G +IL + C+
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 36/297 (12%)
Query: 290 MDHYFKNREFIQAFSLWNEMRQ-NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+D Y + R+ A ++ M++ + +V YN ++NG K+ M+ A + M K+
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
PD T+NILI + K A + M + G P+ +S+ +IRG I
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
++ + M I+L R + + IL L
Sbjct: 284 KMAYEM---------------IELGCRFSEATCEILVDGL-------------------- 308
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
+ G + A L ++L K + P Y L+ C A+++ E+ +KG P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
I+ T LV G T++A K++ +G++ D V +L C + A L
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%)
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P V+N +++ Y + D+ A+ M K P+V T+N LI + +S A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
EM KG P+VV++N LI + + +++ EM++ G R + LV C
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G +A +L ++ L C + V+A + ++
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE 358
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 199/450 (44%), Gaps = 46/450 (10%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C + + A+RL MV++ F D N +++G K+G+++K + +M++ G N
Sbjct: 283 CKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR-VMFSQMIKKGVQSN 341
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSS---------------------------------- 237
+ TY+ +I YC +VD AL L+ +
Sbjct: 342 VFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Query: 238 --MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTSTVFMDHYF 294
M D GI P+ +T +L+ L + LK A +L+ IL++ I P ++
Sbjct: 402 MRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD-------L 454
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
N E ++ SL E+ + + V V+ LC + A +M+ G P F
Sbjct: 455 GNIE-VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPF 513
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
+YN +I L++E + ++ ++ ++ VPD +Y +++ LC D A ++ M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ P +++ II G+ V A T ML+ G+ P+ Y +I + ++G I
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A L EE++ L P TY +LI + + Q +M++ G P+++ YT L
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHV 564
+ +G+ K + + + ++ + +DH+
Sbjct: 694 IGHFLKKGDFKFSFTLFGLMGENDIKHDHI 723
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 214/478 (44%), Gaps = 31/478 (6%)
Query: 119 KMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFT 178
++ R++ +L +GL A LC + AA+ MV G P F+
Sbjct: 467 EIARKDANLAAVGL------------AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM 238
+N ++ L + ++E LV + E +P++ TY ++ C N D A + +M
Sbjct: 515 YNSVIKCLFQENIIEDLAS-LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 239 ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNRE 298
+ G++P + ++ +L + G + EA++ ++L PD + + ++ Y +N
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ-PDEIAYMIMINTYARNGR 632
Query: 299 FIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
+A L E+ ++ + Y VLI+G K +M Y +ML+ G+ P+ Y
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC----- 413
LIG K+G + + + G+M + I D I+Y ++ GL R + R K+
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLW--RAMARKKKRQVIVEPGK 750
Query: 414 --MLNNLMVPKPIV-WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+L L+ KP+V + YG K + ++ + +K + PN++ +N +I +
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGS-KSFAMEVIGK---VKKSIIPNLYLHNTIITGYCA 806
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+G + AY+ E M +G+ P++VTY +L+ + + A+ L PD +
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVM 863
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
Y+ L++ C +A ++ KSG+ + + L C ++A + +D
Sbjct: 864 YSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKD 921
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 209/503 (41%), Gaps = 81/503 (16%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG-LMEKAHDWLVREMLEFGPLPNLVTYN 216
EA L RI + G+ P + + +V+ LC +E H + ++ E G L
Sbjct: 149 EARAHLDRI-IASGYAPSRNSSSLVVDELCNQDRFLEAFHCF--EQVKERGSGLWLWCCK 205
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC-NILVHALCENGHLKEAKKMLEEILN 275
L KG C +++A+ + ++ P V L + C+ G EA+ + + +
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEV 265
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
D + D V T M Y K+ A L+ M + S E+D +N LI+G K +++
Sbjct: 266 DGYYV-DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLD 324
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA------------------CY--- 374
+M+KKGV + FTY+I+IG+ KEG A CY
Sbjct: 325 KGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNL 384
Query: 375 ILGVMSKM---------------GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN-L 418
I G K GIVPD I+Y V+++ L ++ A +L +L+N
Sbjct: 385 IFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGC 444
Query: 419 MVPKPIVWNL------IIDLYGRC--KD-----VSNAILTRDL---------------ML 450
+ P++ +L + L G KD V A++T L M+
Sbjct: 445 GINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
G P F+YN++I + I SL + PDV TY +++ C D
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 511 FALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
A + M + G RP + Y+ ++ +G EAEE +AK+L+SG+ D + I+
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 571 NMYCK----------LEEPVKAF 583
N Y + +EE VK F
Sbjct: 625 NTYARNGRIDEANELVEEVVKHF 647
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 206/504 (40%), Gaps = 71/504 (14%)
Query: 152 CLEGKLEAAIRL-QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C EG ++ A+RL + +V + +++ G K G M+KA D L+R ML+ G +P
Sbjct: 353 CKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR-MLDNGIVP 411
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTG--IQP----------------------- 245
+ +TY L+K + + A+ + S+ D G I P
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARK 471
Query: 246 ----NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
V ++ ALC + A +E+++N P + + F+
Sbjct: 472 DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC-TPLPFSYNSVIKCLFQENIIED 530
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
SL N +++ DV Y +++N LCK + A+ M + G+ P Y+ +IG
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+L K+G+ EA M + GI PDEI+Y +MI + I A EL+ ++ + + P
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ ++I + + + D ML+ G+ PNV Y ALI +K G+ +++L
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF 710
Query: 482 EEMLTKGLFPDVVTY-NLLIG-------------------------------------AA 503
M + D + Y LL G +
Sbjct: 711 GLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSL 770
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
N S FA+++ + V+K P+L + ++ C G EA + K G++ +
Sbjct: 771 GNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNL 829
Query: 564 VPVQILFNMYCKLEEPVKAFNLFQ 587
V IL + + + A +LF+
Sbjct: 830 VTYTILMKSHIEAGDIESAIDLFE 853
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
+PNL +NT+I GYC +D+A SM GI PN VT IL+ + E G ++ A
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+ E + PD V + + + + A +L EM+++ + + +Y L+ L
Sbjct: 851 LFEGTNCE----PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
C ++L A +M + P + + LI L +E K REA + +M + G
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 151/384 (39%), Gaps = 45/384 (11%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSS-MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y LI+ + A Y+ + GI P+ + +V L + EA+ L+ I
Sbjct: 98 YGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRI 157
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ P +S++ +D F++AF + ++++ + + L GLC +
Sbjct: 158 IASGY-APSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH 216
Query: 334 MNLAYGYACEMLKKGVLPDAFT-YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
+N A G + +P Y L K G EA + M G D++ Y
Sbjct: 217 LNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+++ C D ++ A L M+ F
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVER---------------------------------SF 303
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
+ P +F N LI +K G + + + +M+ KG+ +V TY+++IG+ C + D+A
Sbjct: 304 ELDPCIF--NTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 513 LQLRREMVQKGHRPDLIS----YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
L+L V D+ YT L+ +G +A + ++L +G++ DH+ +
Sbjct: 362 LRL---FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Query: 569 LFNMYCKLEEPVKAFNLFQDWLES 592
L M K E A + Q L++
Sbjct: 419 LLKMLPKCHELKYAMVILQSILDN 442
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
I PN N ++ C G L EA LE + + +P+LVT T+ M + + + A
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLES-MQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
L+ + E D V Y+ L+ GLC + A EM K G+ P+ +Y L+
Sbjct: 849 IDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
L T EA ++ M+ + I P I++ +I LC ++ + A+ L M+ +
Sbjct: 906 LCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQS 960
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 45/334 (13%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK + A++L M + G D+ + N I++ LCK +EKA++ F + VT
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS--VDTVT 197
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN ++ G+C + KAL + M + GI PN T N ++ G ++
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIR---------- 247
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
A+ + EM++ E+DVV Y +++G +
Sbjct: 248 --------------------------HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A EM+++GVLP TYN +I L K+ A + M + G P+ +Y V+
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
IRGL + R +EL+ M N P +N++I Y C +V A+ + M
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDC 401
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
PN+ TYN LI SG R S E+M+ G
Sbjct: 402 LPNLDTYNILI-----SGMFVRKRS--EDMVVAG 428
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L GP P T+ + + Y + DKA+ L+ +M + G + + N ++ LC
Sbjct: 120 LRIGPSPK--TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC----- 172
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
K++ +A+ L+ +R VD V YNV
Sbjct: 173 -------------------------------KSKRVEKAYELFRALR-GRFSVDTVTYNV 200
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
++NG C + A EM+++G+ P+ TYN ++ ++ G+ R A M K
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
D ++Y ++ G +I RA+ + M+ ++P +N +I + + +V NA+
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
+ + M++ G PNV TYN LI +G R L + M +G P+ TYN++I
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE 546
+ AL L +M P+L +Y L+ +R +++
Sbjct: 381 SECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
+LC ++E A L R + + F D T+N I+NG C + KA + +++EM+E G
Sbjct: 170 VLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALE-VLKEMVERGIN 227
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PNL TYNT++KG+ + A + M + + VT +VH G +K A+ +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+E++ + +P + T + K A ++ EM + E +V YNVLI GL
Sbjct: 288 FDEMIREGV-LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG---IVP 386
+ M +G P+ TYN++I + + +A LG+ KMG +P
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA---LGLFEKMGSGDCLP 403
Query: 387 DEISYKVMIRGL 398
+ +Y ++I G+
Sbjct: 404 NLDTYNILISGM 415
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 36/307 (11%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
P T + + Y + +A L+ M ++ D+ ++N +++ LCK++ + AY
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
L+ D TYN+++ +T +A +L M + GI P+ +Y M++G
Sbjct: 184 -FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
I A W +++ R ++ +V T
Sbjct: 243 AGQIRHA------------------WEFFLEMKKRDCEI-----------------DVVT 267
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
Y ++ +G I RA ++ +EM+ +G+ P V TYN +I C + + A+ + EMV
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
++G+ P++ +Y L+R G EE ++ G + ++ Y + E
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 581 KAFNLFQ 587
KA LF+
Sbjct: 388 KALGLFE 394
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 411 LWCMLNNL----MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+W +++ + + P P + ++ + Y A+ M + G ++ ++N ++
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFP-DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
KS + +AY L + +G F D VTYN+++ C ++ AL++ +EMV++G
Sbjct: 170 VLCKSKRVEKAYELFRAL--RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
P+L +Y +++ G + A E + ++ K D V + + + E +A N+
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 586 FQD 588
F +
Sbjct: 288 FDE 290
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 177/390 (45%), Gaps = 9/390 (2%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP--LPNLVTYNTLIKGYCTVN 226
++GF D T+N +++ L K E +V + E G L + T+ +K +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFET----MVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
KA+ ++ M + T N L+ +L KEA+ + +++ ++ P+++T
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTY 301
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV ++ + + R I+A +WN+M ++ D+VA+NV++ GL +++ + A M
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG P+ +Y I+I K+ A M G+ PD Y +I G + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
ELL M P +N +I L K +A + M++ + P++ T+N ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
++ + N ++ EEM+ KG+ PD +Y +LI A + EM+ KG +
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILK 556
LI Y + + RG E E A+ K
Sbjct: 542 PLIDYNKFAAD-FHRGGQPEIFEELAQRAK 570
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 2/232 (0%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
A R+ M+ +G PD+ HN ++ GL + A L M GP PN+ +Y +I
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMI 375
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
+ +C +S++ A+ + M D+G+QP+ L+ L ++L+E + +
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE-MQEKGH 434
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
PD T + + A ++N+M QN +E + +N+++ + +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
EM+KKG+ PD +Y +LI L EGK+REAC L M G+ I Y
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDY 546
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 3/328 (0%)
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G + T N ++ L + + +LEE+ K + + T T+ M + +E +
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
A ++ M++ ++ V N L++ L + +L A + LK+ P+ TY +L+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLN 306
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ EA I M G+ PD +++ VM+ GL R A +L M + P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ ++I + + + AI D M+ G+ P+ Y LI + Y L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+EM KG PD TYN LI N + + A ++ +M+Q P + ++ +++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQIL 569
N + + +++K G+ D +L
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 153 LEGKLEA-----AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
LEG L + AI+L +M KG P+V ++ ++ CK ME A ++ +M++ G
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF-DDMVDSG 398
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ Y LI G+ T +D L M + G P+ T N L+ + + A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
++ +++ ++ + P + T + M YF R + ++W EM + + D +Y VLI G
Sbjct: 459 RIYNKMIQNEIE-PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
L A Y EML KG+ YN + G+
Sbjct: 518 LIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 171/396 (43%), Gaps = 48/396 (12%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP--LPNLVTYNTLIKGYC-----TVNS 227
D+ HN ++ + ++ L + +L+ P P T+ L+ C ++++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVK-LFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
V + L L M + G++P++VT +I V +LCE G + EAK +++E L + PD T
Sbjct: 143 VHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYN 198
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ H K ++ + +EMR + ++ D+V++ +LI+ +C ++ + A ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
G PD F YN ++ K EA + M + G+ PD+I+Y +I GL
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL-------- 310
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+ V A + M+ G P+ TY +L+
Sbjct: 311 ---------------------------SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ G A SL EEM +G P+ TYN L+ C R D ++L M G +
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
+ Y LVR G EA E + + S ++D
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSD 439
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M+ G P+ VT + ++ C VD+A L + + P+ T N L+ LC+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
L + ++E+ +D PDLV+ T+ +D+ ++ +A L +++ + D YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
++ G C + A G +M ++GV PD TYN LI L K G+ EA L M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD--VS 440
G PD +Y ++ G+C + + A LL M P +N + L+G CK +
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL--LHGLCKARLMD 387
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ ++M GV Y L+ + VKSG + AY + + + D Y+ L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 162 RLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKG 221
R+ +MV G PD T + V LC+ G +++A D L++E+ E P+ TYN L+K
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD-LMKELTEKHSPPDTYTYNFLLKH 203
Query: 222 YCTVNSVDKALYLYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI 280
C + M D ++P+ V+ IL+ +C + +L+EA ++ ++ N
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK- 262
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PD M + + +A ++ +M++ +E D + YN LI GL K + A Y
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
M+ G PD TY L+ + ++G++ A +L M G P++ +Y ++ GLC
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 401 DRDIVRAKELLWCM 414
R + + EL M
Sbjct: 383 ARLMDKGMELYEMM 396
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 36/260 (13%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK----------VGLMEKAHD 197
VR LC G+++ A L + + +K PD +T+N ++ LCK V M D
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 198 -------------------------WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
+LV ++ G P+ YNT++KG+CT++ +A+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
+Y M + G++P+++T N L+ L + G ++EA+ L+ +++ + PD T T M+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE-PDTATYTSLMNG 344
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ E + A SL EM + YN L++GLCK +LM+ M GV +
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLE 404
Query: 353 AFTYNILIGALWKEGKTREA 372
+ Y L+ +L K GK EA
Sbjct: 405 SNGYATLVRSLVKSGKVAEA 424
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 41/388 (10%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSM--ADTGIQPNRVTCNILVHALCE--NGHLKEA 266
+L +N++++ Y ++ V+ + L+ + + +P R T IL+ C + +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L ++N+ + PD VT+ + + + +A L E+ + D YN L+
Sbjct: 144 HRVLNLMVNNGLE-PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 327 GLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
LCK + +++ Y + EM V PD ++ ILI + REA Y++ + G
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
PD Y +++G C + + E + +Y + K+
Sbjct: 263 PDCFLYNTIMKGFC---TLSKGSE-------------------AVGVYKKMKEE------ 294
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
GV P+ TYN LI K+G + A + M+ G PD TY L+ C
Sbjct: 295 -------GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
AL L EM +G P+ +Y L+ C + E Y + SG+ +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 566 VQILFNMYCKLEEPVKAFNLFQDWLESK 593
L K + +A+ +F ++SK
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSK 435
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
L G++E A + MV G+ PD T+ ++NG+C+ G A L+ EM G P
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS-LLEEMEARGCAP 368
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N TYNTL+ G C +DK + LY M +G++ LV +L ++G + EA ++
Sbjct: 369 NDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Query: 271 EEILNDDKDIPD 282
+ + D K + D
Sbjct: 429 DYAV-DSKSLSD 439
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 39/365 (10%)
Query: 199 LVREMLEFGP-LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
L+ EM + P L + L++ + + N V KA+ + M G++P+ L+ AL
Sbjct: 153 LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL 212
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C+NG +KEA K+ E++ +K P+L T + + + + ++A + +M++ +E D
Sbjct: 213 CKNGSVKEASKVFEDM--REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK-EGKTREACYIL 376
+V + L++G M AY +M K+G P+ Y +LI AL + E + EA +
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M + G D ++Y +I G C W +I
Sbjct: 331 VEMERYGCEADIVTYTALISGFC-------------------------KWGMI------- 358
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
D ++L D M K GV P+ TY +++AH K L E+M +G PD++ Y
Sbjct: 359 -DKGYSVL--DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
N++I AC L A++L EM G P + ++ ++ +G EA + +++
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 557 SGLMN 561
G+ +
Sbjct: 476 RGIFS 480
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 152/341 (44%), Gaps = 2/341 (0%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
C +V L + ++EE+ + ++ + V M + +A + +E
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M + +E D + L++ LCKN + A E +++ P+ + L+ +EGK
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEA-SKVFEDMREKFPPNLRYFTSLLYGWCREGK 251
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
EA +L M + G+ PD + + ++ G + A +L+ M P + +
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 429 IIDLYGRC-KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
+I R K + A+ M ++G ++ TY ALI K G I + YS+ ++M K
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 488 GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
G+ P VTY ++ A + L+L +M ++G PDL+ Y ++R +C G KEA
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 548 EERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+ ++ +GL I+ N + ++A N F++
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKE 472
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 13/322 (4%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C EGKL A + M + G PD+ ++++G G M A+D L+ +M + G PN
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD-LMNDMRKRGFEPN 305
Query: 212 LVTYNTLIKGYC-TVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ Y LI+ C T +D+A+ ++ M G + + VT L+ C+ G + + +L
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ + +P VT M + K +F + L +M++ D++ YNV+I CK
Sbjct: 366 DD-MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACK 424
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI--VPDE 388
+ A EM G+ P T+ I+I +G EAC M GI P
Sbjct: 425 LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNN-----LMVPKPIVWNLIIDLYGRCKDVSNAI 443
+ K ++ L D + AK++ C+ N L V +W + G K+ +
Sbjct: 485 GTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYC 544
Query: 444 LTRDLMLKFGVHPNVFTYNALI 465
L M++ + P TY L+
Sbjct: 545 LD---MMEMDLMPQPNTYAKLM 563
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 150/335 (44%), Gaps = 39/335 (11%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++ A+ + M + G PD + +++ LCK G +++A + +M E P PNL +
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK-VFEDMREKFP-PNLRYFT 240
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+L+ G+C + +A + M + G++P+ V L+ G + +A ++ ++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 277 DKDIPDLVTSTVFMDHYFKNREFI-QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+ P++ TV + + + + +A ++ EM + E D+V Y LI+G CK +++
Sbjct: 301 GFE-PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMID 359
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
Y +M KKGV+P TY ++ A K+ + E ++ M + G PD + Y V+I
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
R C + +V A+ + M G+
Sbjct: 420 RLAC-----------------------------------KLGEVKEAVRLWNEMEANGLS 444
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
P V T+ +I G + A + +EM+++G+F
Sbjct: 445 PGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 84 SKDCSSYD-MSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYT 142
K +YD M+ ++G N +++ K M E + V + + Y CE
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR-VFVEMERYGCEADIV 343
Query: 143 EHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
+ A + C G ++ + M +KG +P T+ I+ K E+ + L+ +
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE-LIEK 402
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M G P+L+ YN +I+ C + V +A+ L++ M G+ P T I+++ G
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 263 LKEAKKMLEEILNDDK-DIPDLVTSTVFMDHYFKNREFIQAFSLWN--EMRQNSMEVDVV 319
L EA +E+++ P T +++ ++ + A +W+ + +S E++V
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK 365
A+ + I+ L + A Y +M++ ++P TY L+ L K
Sbjct: 523 AWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 177/370 (47%), Gaps = 16/370 (4%)
Query: 139 YSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
+SYT A + G+ E ++ L M + P + T+N ++N + GL +
Sbjct: 177 FSYT---ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSV-DKALYLYSSMADTGIQPNRVTCNILVHAL 257
L EM G P++VTYNTL+ C + + D+A ++ +M D GI P+ T + LV
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
+ L++ +L E+ + +PD+ + V ++ Y K+ +A ++++M+ +
Sbjct: 293 GKLRRLEKVCDLLGEMASGGS-LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
Y+VL+N ++ + EM PDA TYNILI + G +E +
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 378 VMSKMGIVPDEISYKVMI-----RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
M + I PD +Y+ +I GL D A+++L M N +VP + +I+
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHED-----ARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
+G+ A++ + M + G +P++ T+++L+ + + G + + ++ ++ G+ +
Sbjct: 467 FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Query: 493 VVTYNLLIGA 502
T+N I A
Sbjct: 527 RDTFNAQIEA 536
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 186/448 (41%), Gaps = 45/448 (10%)
Query: 143 EHAATV--RLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV 200
EH T+ LL EG L+ + + M +G VF++ ++N + G E + + L
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 201 REMLEFGPLPNLVTYNTLIKGYCTVNSVD--KALYLYSSMADTGIQPNRVTCNILVHALC 258
R M P+++TYNT+I C +D L L++ M GIQP+ VT N L+ A C
Sbjct: 201 R-MKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-C 257
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
L + +M+ +ND +PDL T + ++ + K R + L EM D+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+YNVL+ K+ + A G +M G P+A TY++L+ + G+ + +
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M PD +Y N++I+++G
Sbjct: 378 MKSSNTDPDAATY-----------------------------------NILIEVFGEGGY 402
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+ M++ + P++ TY +I A K G A + + M + P Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG 558
+I A ++ AL M + G P + ++ L+ G KE+E ++++ SG
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 559 LM--NDHVPVQI-LFNMYCKLEEPVKAF 583
+ D QI + K EE VK +
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 13/353 (3%)
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
+PN I++ L G L + ++ +E+ + + + T ++ Y +N + +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVS-RSVFSYTALINAYGRNGRYETSL 196
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQL-MNLAYGYACEMLKKGVLPDAFTYNILIGA 362
L + M+ + ++ YN +IN + L G EM +G+ PD TYN L+ A
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
G EA + M+ GIVPD +Y ++ R + + +LL M + +P
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+N++++ Y + + A+ M G PN TY+ L+ +SG L
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
EM + PD TYN+LI + L +MV++ PD+ +Y ++ +C +G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF-ACGKG 435
Query: 543 NTKEAEERYAKILKSGLMNDHVP-------VQILFNMYCKLEEPVKAFNLFQD 588
E KIL+ ND VP V F EE + AFN +
Sbjct: 436 GLHEDAR---KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 6/329 (1%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PN Y +I +DK L ++ M G+ + + L++A NG + + ++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L+ + N+ L +TV ++ L+ EMR ++ D+V YN L++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
L + A M G++PD TY+ L+ K + + C +LG M+ G +PD
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY---GRCKDVSNAILTR 446
SY V++ I A + M P ++++++L+ GR DV L
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE- 377
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M P+ TYN LI + G +L +M+ + + PD+ TY +I A
Sbjct: 378 --MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELV 535
H+ A ++ + M P +YT ++
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVI 464
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 171/444 (38%), Gaps = 77/444 (17%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
R M G +PD+ T++H+V K+ +EK D L+ EM G LP++ +YN L++ Y
Sbjct: 271 RTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD-LLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 225 VNSVDKALYLYSSMADTGIQPNR-----------------------------------VT 249
S+ +A+ ++ M G PN T
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 389
Query: 250 CNILVHALCENGHLKEA----KKMLEEILNDDKD-------------------------- 279
NIL+ E G+ KE M+EE + D +
Sbjct: 390 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 280 ----IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
+P T ++ + + + +A +N M + + ++ L+ + L+
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
+ ++ G+ + T+N I A + GK EA M K PDE + + ++
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFG 453
F R + +E M + ++P + + +++ +YG+ + D N +L ML
Sbjct: 570 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE--MLSNR 627
Query: 454 VHPNVFTYNALILAHVKSGNIYR--AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
V +I + ++ Y L +++ ++G + YN L+ A L +
Sbjct: 628 VSNIHQVIGQMIKGDYDDDSNWQIVEYVL-DKLNSEGCGLGIRFYNALLDALWWLGQKER 686
Query: 512 ALQLRREMVQKGHRPDLISYTELV 535
A ++ E ++G P+L +LV
Sbjct: 687 AARVLNEATKRGLFPELFRKNKLV 710
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 171/361 (47%), Gaps = 6/361 (1%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A + G +E A++ M + G P T+N ++ G G E++ + L+ MLE
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE-LLDLMLE 178
Query: 206 FGPL---PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
G + PN+ T+N L++ +C V++A + M + G++P+ VT N + + G
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 263 LKEAK-KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
A+ +++E+++ +K P+ T + + Y + M++ +E ++V +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N LING + + M + V D TY+ ++ A G +A + M K
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 358
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
G+ PD +Y ++ +G ++ +A+ELL ++ P +++ +I + + +
Sbjct: 359 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDD 417
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
A+ + M KFGV PN+ T+ L+ +++ ++A + + M G+ P+ T+ LL
Sbjct: 418 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 477
Query: 502 A 502
A
Sbjct: 478 A 478
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 186/421 (44%), Gaps = 16/421 (3%)
Query: 176 VFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLY 235
V + ++N L + G +A + + + E G P+L++Y TL+ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQT-VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 236 SSMADTGIQPNRVTCNILVHALCENGHLKEAK----KMLEEILNDDKDIPDLVTSTVFMD 291
S + +G + + + N +++A E+G++++A KM E LN P T +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLN-----PTTSTYNTLIK 158
Query: 292 HY---FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
Y K + L E + ++ +NVL+ CK + + A+ +M + G
Sbjct: 159 GYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 349 VLPDAFTYNILIGALWKEGKT--REACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
V PD TYN + ++G+T E+ + ++ K P+ + +++ G C + +
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+ M + +V+N +I+ + D LM + V +V TY+ ++
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
A +G + +A + +EM+ G+ PD Y++L + A +L ++ + RP
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE-SRP 397
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+++ +T ++ C G+ +A + K+ K G+ + + L Y ++++P KA +
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Query: 587 Q 587
Q
Sbjct: 458 Q 458
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 155/347 (44%), Gaps = 6/347 (1%)
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
L++ L E G EA+ + + L + P L++ T + +++ S+ +E+ Q+
Sbjct: 51 LMNVLIERGRPHEAQTVFK-TLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++D + +N +IN ++ M A +M + G+ P TYN LI GK +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 373 CYILGVMSKMGIV---PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
+L +M + G V P+ ++ V+++ C + + A E++ M + P + +N I
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 430 IDLYGRCKDV--SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
Y + + + + + +++K PN T ++ + + G + M
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 488 GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
+ ++V +N LI + D ++ M + + D+I+Y+ ++ G ++A
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 548 EERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKR 594
+ + +++K+G+ D IL Y + +EP KA L + + R
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR 396
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 177/390 (45%), Gaps = 9/390 (2%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP--LPNLVTYNTLIKGYCTVN 226
++GF D T+N +++ L K E +V + E G L + T+ +K +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFET----MVSVLEEMGTKGLLTMETFTIAMKAFAAAK 242
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
KA+ ++ M + T N L+ +L KEA+ + +++ ++ P+++T
Sbjct: 243 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTY 300
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV ++ + + R I+A +WN+M + ++ D+VA+NV++ GL ++ + A M
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG P+ +Y I+I K+ A M G+ PD Y +I G + +
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
ELL M P +N +I L K + + M++ + P++ T+N ++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
++ + N ++ +EM+ KG+ PD +Y +LI + A + EM+ KG +
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 540
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILK 556
LI Y + + RG E E A+ K
Sbjct: 541 PLIDYNKFAAD-FHRGGQPEIFEELAQRAK 569
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 4/241 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-LVREMLEFGPLP 210
C L A R+ M+ G PD+ HN ++ GL + M+K+ L M GP P
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS--MKKSDAIKLFHVMKSKGPCP 365
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+ +Y +I+ +C +S++ A+ + M D+G+QP+ L+ L ++L
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+E + + PD T + + ++N+M QN +E + +N+++
Sbjct: 426 KE-MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ + EM+KKG+ PD +Y +LI L EGK+REAC L M G+ I
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 391 Y 391
Y
Sbjct: 545 Y 545
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 140/328 (42%), Gaps = 3/328 (0%)
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ 301
G + T N ++ L + + +LEE+ K + + T T+ M + +E +
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
A ++ M++ ++ V N L++ L + +L A + LK+ P+ TY +L+
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLN 305
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
+ EA I M G+ PD +++ VM+ GL A +L M + P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ ++I + + + AI D M+ G+ P+ Y LI + Y L
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIR 541
+EM KG PD TYN LI N + + ++ +M+Q P + ++ +++ +
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 542 GNTKEAEERYAKILKSGLMNDHVPVQIL 569
N + + +++K G+ D +L
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 153 LEGKLEA-----AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
LEG L + AI+L +M KG P+V ++ ++ CK ME A ++ +M++ G
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF-DDMVDSG 397
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ Y LI G+ T +D L M + G P+ T N L+ + +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
++ +++ ++ + P + T + M YF R + ++W+EM + + D +Y VLI G
Sbjct: 458 RIYNKMIQNEIE-PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
L A Y EML KG+ YN + G+
Sbjct: 517 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 210/507 (41%), Gaps = 61/507 (12%)
Query: 143 EHAATVRLL--CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV 200
EH +T+ ++ C G+++ A L ++ ++ + T+ +++G K ++KA L
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ-LF 306
Query: 201 REMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
+M G ++ Y+ LI G C ++ AL LY + +GI P+R IL LC
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR---GILGKLLCSF 363
Query: 261 GHLKEAKKMLEEILND-DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN------- 312
E ++ E I+ D DK L+ ++F + + +N +A+S + N
Sbjct: 364 SEESELSRITEVIIGDIDKKSVMLLYKSLF-EGFIRNDLVHEAYSFIQNLMGNYESDGVS 422
Query: 313 -----------SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
++ D + +++IN L K +++A ++++ G++P YN +I
Sbjct: 423 EIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIE 482
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL---------- 411
+ KEG++ E+ +LG M G+ P + + + L D V A +LL
Sbjct: 483 GMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVS--------------------NAILTRDLML- 450
W +V K +D DV+ N + R L L
Sbjct: 543 WIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF 602
Query: 451 ----KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
G P+V Y+ LI A K+ A L EM++KGL P V TYN +I C
Sbjct: 603 RDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKE 662
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
D L M + PD+I+YT L+ C G EA R+ ++ + +
Sbjct: 663 GEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITF 722
Query: 567 QILFNMYCKLEEPVKAFNLFQDWLESK 593
L CK +A F++ E +
Sbjct: 723 MALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 171/384 (44%), Gaps = 22/384 (5%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K++ A+ L +VQ G +P +N+I+ G+CK G E++ L+ EM + G P+ T
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK-LLGEMKDAGVEPSQFTL 512
Query: 216 NTLIKGYCTVNSVD--KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
N + C D AL L M G +P LV LCENG +A K L+++
Sbjct: 513 NCIYG--CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDV 570
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + +V ST +D KN + L+ ++ N DV+AY+VLI LCK
Sbjct: 571 AGEGF-LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACR 629
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
A EM+ KG+ P TYN +I KEG+ + M + PD I+Y
Sbjct: 630 TMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTS 689
Query: 394 MIRGLCFD----RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
+I GLC I R E M P I + +I +C A++ M
Sbjct: 690 LIHGLCASGRPSEAIFRWNE----MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
+ + P+ Y +L+ + + S NI + + EM+ KG FP V N ++ A N+ S
Sbjct: 746 EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML--AVNVTSK 803
Query: 510 DFALQLRRE-----MVQKGHRPDL 528
F LR +++ G P L
Sbjct: 804 -FVEDLRTSCYLTCLIKDGRIPIL 826
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 188/463 (40%), Gaps = 69/463 (14%)
Query: 186 LCKVGLMEKAHDWLVREMLEFGP-LPNLVTYNTLIKG----------------------- 221
L GL+++A R + E G +PN TYN L++
Sbjct: 151 LGNAGLVDEASSVFDR-VREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCG 209
Query: 222 --------------YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
YC ++AL +++ + G ++ ILV + C+ G + +A
Sbjct: 210 FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAF 268
Query: 268 KMLEEILNDDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+++E + +++DI + T V + + K +AF L+ +MR+ M D+ Y+VLI
Sbjct: 269 ELIEML--EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG 326
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK-TREACYILGVMSKMGIV 385
GLCK++ + +A E+ + G+ PD L+ + +E + +R I+G + K ++
Sbjct: 327 GLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM 386
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL------------------MVPKPIVWN 427
+ YK + G + + A + ++ N ++P +
Sbjct: 387 ---LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLS 443
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
++I+ + V A+ +++ G+ P YN +I K G + L EM
Sbjct: 444 IVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDA 503
Query: 488 GLFPDVVTYNLLIGAACNLRSHDF--ALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
G+ P T N + G C DF AL L ++M G P + T LV++ C G
Sbjct: 504 GVEPSQFTLNCIYG--CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAV 561
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+A + + G + V + K E + LF+D
Sbjct: 562 DACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
+R Y E V+ LC G+ A + + +GFL + ++GL K
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+++ + L R++ G P+++ Y+ LIK C +A L++ M G++P T N
Sbjct: 595 VDRGLE-LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
++ C+ G + + + D+K+ PD++T T + + +A WNEM+
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKN-PDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
+ + + LI GLCK A Y EM +K + PD+ Y
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 172/393 (43%), Gaps = 8/393 (2%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A + L + + A + M + PD T ++ L K G K + +M E
Sbjct: 278 AAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSE 337
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
G + + L+K +C ++AL + + M GI+ N + N L+ A ++ H++E
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
+ + E + D P T + MD Y + + +L EM +E +V +Y LI
Sbjct: 398 VEGLFTE-MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI 456
Query: 326 NGLCKNQLM-NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
+ + + M ++A M K G+ P + +Y LI A G +A M K GI
Sbjct: 457 SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
P +Y ++ D + E+ ML + I +N ++D + + I
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ---GLYIE 573
Query: 445 TRDLMLKF---GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
RD++ +F G+ P+V TYN L+ A+ + G + L +EM L PD +TY+ +I
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 502 AACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A +R A + MV+ G PD SY +L
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 157/390 (40%), Gaps = 48/390 (12%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH-LKEA----KKM 269
YN I G D A +Y +M + P+ VTC IL+ L + G KE +KM
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 270 LEEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
E+ + +D+ LV S F D K +A + EM + + + + YN L++
Sbjct: 336 SEKGVKWSQDVFGGLVKS--FCDEGLKE----EALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
K+ + G EM KG+ P A TYNIL+ A + + +L M +G+ P+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 389 ISYKVMIRGLCFDRDIVR-AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
SY +I + + A + M + P + +I Y A + +
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYR------------------------------- 476
M K G+ P+V TY +++ A +SG+ +
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 477 ----AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
A + E GL P V+TYN+L+ A QL +EM +PD I+Y+
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMND 562
++ + K A + ++KSG + D
Sbjct: 630 TMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKT-REACYI 375
DV YN I+GL +Q + A+ M K V PD T ILI L K G++ +E I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
MS+ G+ + + +++ C D + KE
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFC-DEGL---KE-------------------------- 361
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
A++ + M K G+ N YN L+ A+ KS +I L EM KGL P T
Sbjct: 362 -----EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT 416
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE----AEERY 551
YN+L+ A D L REM G P++ SYT L+ G TK+ A + +
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI---SAYGRTKKMSDMAADAF 473
Query: 552 AKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
++ K GL L + Y KA+ F++
Sbjct: 474 LRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 172/377 (45%), Gaps = 13/377 (3%)
Query: 149 RLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP 208
R LC K AI + + + G PD+ +N ++N K L +A L++EM E G
Sbjct: 236 RRLCDYSK---AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREAR-LLIKEMNEAGV 291
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
LPN V+Y+TL+ Y + +AL +++ M + + TCNI++ + +KEA +
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+ + D + P++V+ + Y + F +A L+ M++ +E +VV YN +I
Sbjct: 352 LFWSLRKMDIE-PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
K A EM +G+ P+A TY+ +I K GK A + + G+ D+
Sbjct: 411 GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 389 ISYKVMIRGLCFDRD--IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
+ Y+ MI + ++R + AK LL + L +P I I + + A
Sbjct: 471 VLYQTMI--VAYERVGLMGHAKRLL----HELKLPDNIPRETAITILAKAGRTEEATWVF 524
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
+ G ++ + +I + ++ + E+M T G FPD +++ A
Sbjct: 525 RQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQ 584
Query: 507 RSHDFALQLRREMVQKG 523
R + A + REM ++G
Sbjct: 585 REFEKADTVYREMQEEG 601
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 192/437 (43%), Gaps = 40/437 (9%)
Query: 189 VGLMEKAHDWLVREML------EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG 242
V L+ + +DW L E P++ YN +++ D A L+ M
Sbjct: 126 VSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA 185
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
+ P+R T + L+ + + G A L++ + D+ DLV + ++ + ++ +A
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQK-MEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
S+++ ++++ + D+VAYN +IN K +L A EM + GVLP+ +Y+ L+
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR-AKELLWCMLNNLMVP 421
+ K EA + M ++ D + +MI + D+V+ A L W + + P
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMI-DVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 422 KPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+ +N I+ +YG + AI LM + + NV TYN +I + K+ +A +L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV------ 535
+EM ++G+ P+ +TY+ +I D A L +++ G D + Y ++
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 536 --------------------RESCIR-----GNTKEAEERYAKILKSGLMNDHVPVQILF 570
RE+ I G T+EA + + +SG + D +
Sbjct: 484 GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543
Query: 571 NMYCKLEEPVKAFNLFQ 587
N+Y + + V +F+
Sbjct: 544 NLYSRNQRYVNVIEVFE 560
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 142/299 (47%), Gaps = 11/299 (3%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHD--WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
D+ T N +++ ++ ++++A W +R+M PN+V+YNT+++ Y +A+
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKM---DIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
+L+ M I+ N VT N ++ + ++A +++E+ + + P+ +T + +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE-PNAITYSTIISI 444
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ K + +A +L+ ++R + +E+D V Y +I + LM G+A +L + LPD
Sbjct: 445 WGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM----GHAKRLLHELKLPD 500
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
I L K G+T EA ++ + G V D + MI ++ V E+
Sbjct: 501 NIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFE 560
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNA-ILTRDLMLKFGVHPNVFTYNALILAHVK 470
M P V ++++ YG+ ++ A + R++ + V P+ + L L K
Sbjct: 561 KMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSK 619
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 189/453 (41%), Gaps = 56/453 (12%)
Query: 133 RGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP-----DVFTHNHIVNGLC 187
+GY ++ + + A L G AA +L +M +G P ++ H N
Sbjct: 152 KGY--KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADN--- 206
Query: 188 KVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
+ GL ++ +M +FG P + YN ++ D AL +Y + G+
Sbjct: 207 RRGLRVY---YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEES 263
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
T ILV LC+ G ++E ++L+ + ++ PD+ T + + +W+
Sbjct: 264 TTFMILVKGLCKAGRIEEMLEILQR-MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
EMR++ ++ DV+AY L+ GLCK+ + Y EM K +L D Y +LI +G
Sbjct: 323 EMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP-----K 422
K R AC + + G + D Y +I+GLC + +A +L + + P
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
Query: 423 PIVWNLIIDLYGRCKDVSNAI-------------LTRDL------------------MLK 451
PI+ ++ R D SN + LT+ +LK
Sbjct: 443 PIMVAYVV--MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILK 500
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
H +V YN L+ A K G+I ++ SL EM G PD +Y++ I C + D
Sbjct: 501 TKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI--CCFVEKGDV 558
Query: 512 --ALQLRREMVQKGHRPDLISYTELVRESCIRG 542
A ++++ P + +Y L + C G
Sbjct: 559 KAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIG 591
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 181/441 (41%), Gaps = 60/441 (13%)
Query: 115 LERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP 174
LE L+ MREN+ C+ + A ++ L EG L+A++R+ M + P
Sbjct: 283 LEILQRMRENL-----------CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 175 DVFTHNHIVNGLCKVGLMEKAH---------------------------DWLVR------ 201
DV + +V GLCK G +E+ + D VR
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 202 -EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
++++ G + ++ YN +IKG C+VN VDKA L+ + ++P+ T + ++ A
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTS--TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
L + +LE I + D +T + KN + F + S+ V
Sbjct: 452 NRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV-- 509
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
YN+L+ L K + + EM K G PD+ +Y+I I ++G + AC
Sbjct: 510 --YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEK 567
Query: 379 MSKMGIVPDEISYKVMIRGLC----FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+ +M VP +Y + +GLC D ++ +E C+ N P + L +
Sbjct: 568 IIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE---CLGNVESGPMEFKYALTVCHVC 624
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF--PD 492
+ + + D M + GV N Y A+I K G I A + E+ + + D
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEAD 684
Query: 493 VVTYNLLIGAACNLRSHDFAL 513
+V Y ++ ++ D L
Sbjct: 685 MVVYEEMLIEQTKKKTADLVL 705
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 164/369 (44%), Gaps = 5/369 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
L G + A+ + + G + + T +V GLCK G +E+ + L R M E P
Sbjct: 238 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQR-MRENLCKP 296
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++ Y +IK + ++D +L ++ M I+P+ + LV LC++G ++ ++
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E + + + D V ++ + + + A +LW ++ + D+ YN +I GLC
Sbjct: 357 ME-MKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI-VPDEI 389
++ AY +++ + PD T + ++ A + + +L + ++G V D +
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYL 475
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
+ + LC D + ++ +L V+N++++ + D+ ++ M
Sbjct: 476 TQ--FFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEM 533
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
K G P+ +Y+ I V+ G++ A S E+++ P + Y L C +
Sbjct: 534 RKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI 593
Query: 510 DFALQLRRE 518
D + L RE
Sbjct: 594 DAVMLLVRE 602
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 131/363 (36%), Gaps = 71/363 (19%)
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A + + + G + + N + L NGH + A + L E+++ P + +
Sbjct: 142 AKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQ-LPELMDSQGRPPSEKQFEILI 200
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ NR ++ + ++ +M+ K G
Sbjct: 201 RMHADNRRGLRVYYVYEKMK-----------------------------------KFGFK 225
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P F YN ++ AL K G A + + G+V + ++ ++++GLC I E+
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
L M NL CK P+VF Y A+I V
Sbjct: 286 LQRMRENL-----------------CK------------------PDVFAYTAMIKTLVS 310
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
GN+ + + +EM + PDV+ Y L+ C + +L EM K D
Sbjct: 311 EGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREI 370
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWL 590
Y L+ G + A + ++ SG + D + C + + KA+ LFQ +
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 591 ESK 593
E +
Sbjct: 431 EEE 433
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 176/390 (45%), Gaps = 9/390 (2%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP--LPNLVTYNTLIKGYCTVN 226
++GF T+N +++ L K E +V + E G L + T+ +K +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFET----MVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
KA+ ++ M + T N L+ +L KEA+ + +++ ++ P+++T
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTY 301
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV ++ + + R I+A +WN+M + ++ D+VA+NV++ GL ++ + A M
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG P+ +Y I+I K+ A M G+ PD Y +I G + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
ELL M P +N +I L K + + M++ + P++ T+N ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
++ + N ++ +EM+ KG+ PD +Y +LI + A + EM+ KG +
Sbjct: 482 SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 541
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILK 556
LI Y + + RG E E A+ K
Sbjct: 542 PLIDYNKFAAD-FHRGGQPEIFEELAQRAK 570
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 4/241 (1%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-LVREMLEFGPLP 210
C L A R+ M+ G PD+ HN ++ GL + M+K+ L M GP P
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS--MKKSDAIKLFHVMKSKGPCP 366
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+ +Y +I+ +C +S++ A+ + M D+G+QP+ L+ L ++L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+E + + PD T + + ++N+M QN +E + +N+++
Sbjct: 427 KE-MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ + EM+KKG+ PD +Y +LI L EGK+REAC L M G+ I
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 391 Y 391
Y
Sbjct: 546 Y 546
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 159/354 (44%), Gaps = 11/354 (3%)
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE-- 271
TYN+++ + + + M G+ +T A+ KE KK +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL----LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
E++ K + T +D + + +A L++++++ +++ Y VL+NG C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 311
Query: 332 QLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
+ + A +M+ G+ PD +N+++ L + K +A + VM G P+ SY
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+MIR C + A E M+++ + P V+ +I +G K + M +
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G P+ TYNALI + +M+ + P + T+N+++ + R+++
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA----EERYAKILKSGLMN 561
+ EM++KG PD SYT L+R G ++EA EE K +K+ L++
Sbjct: 492 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 3/321 (0%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
T N ++ L + + +LEE+ K + + T T+ M + +E +A ++
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKAVGIFEL 254
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M++ ++ V N L++ L + +L A + LK+ P+ TY +L+ +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRN 313
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
EA I M G+ PD +++ VM+ GL A +L M + P + +
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+I + + + AI D M+ G+ P+ Y LI + Y L +EM KG
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
PD TYN LI N + + ++ +M+Q P + ++ +++ + N +
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 493
Query: 549 ERYAKILKSGLMNDHVPVQIL 569
+ +++K G+ D +L
Sbjct: 494 AVWDEMIKKGICPDDNSYTVL 514
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 153 LEGKLEA-----AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
LEG L + AI+L +M KG P+V ++ ++ CK ME A ++ +M++ G
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF-DDMVDSG 398
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P+ Y LI G+ T +D L M + G P+ T N L+ + +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
++ +++ ++ + P + T + M YF R + ++W+EM + + D +Y VLI G
Sbjct: 459 RIYNKMIQNEIE-PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
L A Y EML KG+ YN + G+
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 182/419 (43%), Gaps = 57/419 (13%)
Query: 168 VQKGFL--PDVFTHNHIVNGLCKVGLMEKAHDW-LVREMLEFGPLPNLVTYNT---LIKG 221
++ GF P +F + +VN LCK E A W LV + + NLV+ +T LI+
Sbjct: 127 MKPGFTLSPSLF--DSVVNSLCKAREFEIA--WSLVFDRVRSDEGSNLVSADTFIVLIRR 182
Query: 222 YCTVNSVDKALYLYSSMADTGIQPNRVT----CNILVHALCENGHLKEAKKMLEEI--LN 275
Y V +A+ + T +L+ ALC+ GH++EA LE I
Sbjct: 183 YARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTM 242
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
D +P + + ++ +F++R+ QA LW EM+ +++ VV Y LI G C+ + +
Sbjct: 243 DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQ 302
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV---PDEISYK 392
+A EM + + +N +I L + G+ EA LG+M + + P ++Y
Sbjct: 303 IAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA---LGMMERFFVCESGPTIVTYN 359
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+++ C D+ A ++L +M+
Sbjct: 360 SLVKNFCKAGDLPGASKIL-----------------------------------KMMMTR 384
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
GV P TYN K +L +++ G PD +TY+L++ C A
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
+Q+ +EM +G PDL++ T L+ C +EA E + ++ G++ ++ +++ N
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDN 503
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 9/272 (3%)
Query: 323 VLINGLCKNQLMNLAYGYACEM---LKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
VL++ LCK + A Y + + +P +NIL+ ++ K ++A + M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
M + P ++Y +I G C R + A E+L M M +V+N IID G +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 440 SNAILTRDLMLKFGV---HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
S A+ +M +F V P + TYN+L+ K+G++ A + + M+T+G+ P TY
Sbjct: 337 SEAL---GMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
N + + L ++++ GH PD ++Y +++ C G A + ++
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 557 SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G+ D + +L ++ C+LE +AF F +
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 50/320 (15%)
Query: 127 LVKIGLRGYACEYSYT---EHAATVRLL-------CLEGKL-EAAIRLQRI--MVQKGFL 173
+V+ +R + SY + A +RLL C EG + EA++ L+RI + ++
Sbjct: 188 MVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWV 247
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P V N ++NG + +++A L EM P +VTY TLI+GYC + V A+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEK-LWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 234 LYSSMADTGIQ-----------------------------------PNRVTCNILVHALC 258
+ M ++ P VT N LV C
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+ G L A K+L+ ++ D P T F ++ K+ + + +L+ ++ + D
Sbjct: 367 KAGDLPGASKILKMMMTRGVD-PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+ Y++++ LC++ ++LA EM +G+ PD T +LI L + EA
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 379 MSKMGIVPDEISYKVMIRGL 398
+ GI+P I++K++ GL
Sbjct: 486 AVRRGIIPQYITFKMIDNGL 505
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 26/359 (7%)
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
L S++ +TGI+P+ LVHAL + L + +L + + P S D
Sbjct: 88 LESALDETGIEPSVE----LVHALFD--RLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSV 141
Query: 294 F----KNREFIQAFSL-WNEMR--QNSMEVDVVAYNVLIN-----GLCKNQLMNLAYGYA 341
K REF A+SL ++ +R + S V + VLI G+ + + + +
Sbjct: 142 VNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS 201
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL----GVMSKMGIVPDEISYKVMIRG 397
E + K + +L+ AL KEG REA L G M VP + +++ G
Sbjct: 202 YEPVCKSAT-ELRLLEVLLDALCKEGHVREASMYLERIGGTMDS-NWVPSVRIFNILLNG 259
Query: 398 LCFDRDIVRAKELLWCMLNNLMV-PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
R + +A E LW + + V P + + +I+ Y R + V A+ + M +
Sbjct: 260 WFRSRKLKQA-EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEI 318
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
N +N +I ++G + A + E P +VTYN L+ C A ++
Sbjct: 319 NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
+ M+ +G P +Y + T+E Y K++++G D + ++ M C+
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCE 437
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 155 GKLEAAI-RLQRIMV-QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNL 212
G+L A+ ++R V + G P + T+N +V CK G + A +++ M+ G P
Sbjct: 334 GRLSEALGMMERFFVCESG--PTIVTYNSLVKNFCKAGDLPGASK-ILKMMMTRGVDPTT 390
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
TYN K + N ++ + LY + + G P+R+T ++++ LCE+G L A ++ +E
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ N D PDL+T+T +LI+ LC+ +
Sbjct: 451 MKNRGID-PDLLTTT-----------------------------------MLIHLLCRLE 474
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
++ A+ +++G++P T+ ++ L +G + A + +MS +
Sbjct: 475 MLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSL 524
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 31/386 (8%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A + G +E A++ M + G P T+N ++ G G E++ + L+ MLE
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE-LLDLMLE 178
Query: 206 FGPL---PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
G + PN+ T+N L++ +C V++A + M + G++P+ VT N + + G
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 263 LKEAK-KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
A+ +++E+++ +K P+ T + + Y + M++ +E ++V +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 322 NVLINGLCKN-----------QLMNLAYGYACEMLKK--------------GVLPDAFTY 356
N LING + L+ +++ E++ V D TY
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITY 358
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+ ++ A G +A + M K G+ PD +Y ++ +G ++ +A+ELL ++
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
P +++ +I + + +A+ + M KFGV PN+ T+ L+ +++ ++
Sbjct: 419 ESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGA 502
A + + M G+ P+ T+ LL A
Sbjct: 478 AEEVLQMMRGCGVKPENSTFLLLAEA 503
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 199/453 (43%), Gaps = 55/453 (12%)
Query: 176 VFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI------KGYCTVNSV- 228
V + ++N L + G +A + + + E G P+L++Y TL+ K Y +++S+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQT-VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 229 ----------------------------DKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
+ A+ M + G+ P T N L+
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 261 GHLKEAKKMLEEILND-DKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
G + + ++L+ +L + + D+ P++ T V + + K ++ +A+ + +M + + D
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 319 VAYNVLINGLCKNQLMNLAYGYACE--MLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
V YN + + A E ++K+ P+ T I++G +EG+ R+ +
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 377 GVMSKMGIVPDEISYKVMIRGL--CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
M +M + + + + +I G DRD + L +++ +N ++L G
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMS---------FNEEVELVG 334
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
K + +LT LM + V +V TY+ ++ A +G + +A + +EM+ G+ PD
Sbjct: 335 NQK-MKVQVLT--LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
Y++L + A +L ++ + RP+++ +T ++ C G+ +A + K+
Sbjct: 392 AYSILAKGYVRAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 450
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
K G+ + + L Y ++++P KA + Q
Sbjct: 451 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 483
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 156/372 (41%), Gaps = 31/372 (8%)
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
L++ L E G EA+ + + L + P L++ T + +++ S+ +E+ Q+
Sbjct: 51 LMNVLIERGRPHEAQTVFK-TLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++D + +N +IN ++ M A +M + G+ P TYN LI GK +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 373 CYILGVMSKMGIV---PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLI 429
+L +M + G V P+ ++ V+++ C + + A E++ M + P + +N I
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 430 IDLYGRCKDV--SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
Y + + + + + +++K PN T ++ + + G + M
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 488 GLFPDVVTYNLLIGAACNLRSHD-------------------------FALQLRREMVQK 522
+ ++V +N LI + D +Q+ M +
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 523 GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
+ D+I+Y+ ++ G ++A + + +++K+G+ D IL Y + +EP KA
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 409
Query: 583 FNLFQDWLESKR 594
L + + R
Sbjct: 410 EELLETLIVESR 421
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 186/425 (43%), Gaps = 17/425 (4%)
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
I+ + F PDV N +++ + ++A V ++LE +P TY LIK YC
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV-QLLESRYVPTEDTYALLIKAYCMA 225
Query: 226 NSVDKALYLYSSMADTGIQPNRVTC---NILVHALCE-NGHLKEAKKMLEEILNDDKDIP 281
+++A + M + + P + N + L + G+ +EA + + + D+ P
Sbjct: 226 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR-MKRDRCKP 284
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
T + ++ Y K + ++ L+ EMR + + ++ Y L+N + L A
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI-----R 396
++ + G+ PD + YN L+ + + G A I +M MG PD SY +M+
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
GL D + V + M + P L++ Y + +DV+ M + GV P
Sbjct: 405 GLHSDAEAVFEE-----MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
+ F N+++ + + G + + EM D+ TYN+LI + +L
Sbjct: 460 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
E+ +K RPD++++T + + + E + +++ SG D ++L + C
Sbjct: 520 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSS 578
Query: 577 EEPVK 581
EE V+
Sbjct: 579 EEQVE 583
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P++ T+ +VN + GL EKA + + ++ E G P++ YN L++ Y A
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEE-IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
++S M G +P+R + NI+V A G +A+ + EE + P + + + + Y
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE-MKRLGIAPTMKSHMLLLSAY 436
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN--------------------GLCK--- 330
K R+ + ++ EM +N +E D N ++N G C
Sbjct: 437 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 331 ---NQLMNLAYGYA----------CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
N L+N+ YG A E+ +K PD T+ IGA ++ + +
Sbjct: 497 STYNILINI-YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL----MVPKPIVWNLIID 431
M G PD + KV++ + + + +L M + +VPK + +L ++
Sbjct: 556 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSLTVN 613
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 186/425 (43%), Gaps = 17/425 (4%)
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
I+ + F PDV N +++ + ++A V ++LE +P TY LIK YC
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV-QLLESRYVPTEDTYALLIKAYCMA 203
Query: 226 NSVDKALYLYSSMADTGIQPNRVTC---NILVHALCE-NGHLKEAKKMLEEILNDDKDIP 281
+++A + M + + P + N + L + G+ +EA + + + D+ P
Sbjct: 204 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR-MKRDRCKP 262
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
T + ++ Y K + ++ L+ EMR + + ++ Y L+N + L A
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI-----R 396
++ + G+ PD + YN L+ + + G A I +M MG PD SY +M+
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
GL D + V + M + P L++ Y + +DV+ M + GV P
Sbjct: 383 GLHSDAEAVFEE-----MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLR 516
+ F N+++ + + G + + EM D+ TYN+LI + +L
Sbjct: 438 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 517 REMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKL 576
E+ +K RPD++++T + + + E + +++ SG D ++L + C
Sbjct: 498 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSS 556
Query: 577 EEPVK 581
EE V+
Sbjct: 557 EEQVE 561
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P++ T+ +VN + GL EKA + + ++ E G P++ YN L++ Y A
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEE-IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
++S M G +P+R + NI+V A G +A+ + EE + P + + + + Y
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE-MKRLGIAPTMKSHMLLLSAY 414
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN--------------------GLCK--- 330
K R+ + ++ EM +N +E D N ++N G C
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 331 ---NQLMNLAYGYA----------CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
N L+N+ YG A E+ +K PD T+ IGA ++ + +
Sbjct: 475 STYNILINI-YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL----MVPKPIVWNLIID 431
M G PD + KV++ + + + +L M + +VPK + +L ++
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSLTVN 591
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 206/484 (42%), Gaps = 88/484 (18%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+LE A+R M +G PD T N ++NG C+ M++A V EM P++V+Y
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFV-EMKGNKIGPSVVSY 328
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE---- 271
T+IKGY V+ VD L ++ M +GI+PN T + L+ LC+ G + EAK +L+
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 272 ------------EILNDDKDIPDLVTST-------------------VFMDHYFKNREFI 300
++L D+ +T V +++ K +
Sbjct: 389 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 448
Query: 301 QAFSLWNEM--------RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+A L + + Q+++E++ AYN +I LC N A +++K+GV D
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QD 507
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
N LI KEG + IL +MS+ G+ + +Y+++I+ + AK L
Sbjct: 508 QDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 413 CMLNNLMVPKPIVWNLIIDLY---GRCKDVSNAIL-----------TRDLMLK------- 451
M+ + VP ++ +I+ GR + S ++ DL+ K
Sbjct: 568 SMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLM 627
Query: 452 -------------FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY-- 496
+ + ++L+ + G A L + L + L + +Y
Sbjct: 628 RGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDK 687
Query: 497 --NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
+ L+GA L ++ ++ ++KG D S EL++ GNTK+A+ +++
Sbjct: 688 VLDALLGAGKTLNAYSVLCKI----MEKGSSTDWKSSDELIKSLNQEGNTKQADV-LSRM 742
Query: 555 LKSG 558
+K G
Sbjct: 743 IKKG 746
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 187/460 (40%), Gaps = 15/460 (3%)
Query: 143 EHAATVRLLCLEGKLEAAIRLQRIMVQKGFLP-DVFTHNHIVNGLCKVGLMEKAHDWLVR 201
+H+ +L KLE A++ R + G + D TH ++ L +V + A L+
Sbjct: 116 DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILL- 174
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+M E G + + LI+ Y V +++ ++ M D G++ + N L + G
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
AK+ +++++ + P T + + +F + A + +M+ + D +
Sbjct: 235 RYMMAKRYFNKMVSEGVE-PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF 293
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N +ING C+ + M+ A EM + P +Y +I + + I M
Sbjct: 294 NTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK--PIVWNLIIDLYGRCKDV 439
GI P+ +Y ++ GLC +V AK +L M+ + PK I L++ + D+
Sbjct: 354 SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS-QSKAGDM 412
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF---PDVV-- 494
+ A M V Y LI K+ RA L + ++ K + D +
Sbjct: 413 AAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEM 472
Query: 495 ---TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
YN +I CN A L R+++++G + D + L+R GN + E
Sbjct: 473 EPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 552 AKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ + G+ + ++L Y EP A +E
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG-PLPNLVTYNTLIKGYCTVNSVD 229
G P+ N +V CK G + A +V EM G PN +TY+TL+ +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAF-LVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 230 KALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
+A+ L+ M + GI P+ VT N++++ C G ++ AKK+L+ + + P++ +
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD-FMKKNGCNPNVYNYSA 308
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
M+ + K + +A ++E+++ +++D V Y L+N C+N + A EM
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
D TYN+++ L EG++ EA +L G+ ++ SY++++ LC + ++ +A
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 409 ELLWCMLNNLMVPKPIVWN-LIIDLYGRCKDVSNAILTRDLM--LKFGVHPNVFTYNALI 465
+ L M + P WN L++ L C+ I R L+ L+ G+ P ++ A++
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRL---CESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 466 LAHVKSGNIYRAYSLKEEMLT 486
+ K + + L + +++
Sbjct: 486 ESICKERKLVHVFELLDSLVS 506
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF----GPLPNLV 213
EA + ++ ++G PD T N ++NG C+ G +E+A +++L+F G PN+
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA-----KKILDFMKKNGCNPNVY 304
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y+ L+ G+C V + +A + + TG++ + V L++ C NG EA K+L E
Sbjct: 305 NYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE- 363
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ + D +T V + +A + ++ + ++ +Y +++N LC N
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGE 423
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A + M ++G+ P T+N L+ L + G T +L ++G++P S+
Sbjct: 424 LEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGA 483
Query: 394 MIRGLCFDRDIVRAKELL 411
++ +C +R +V ELL
Sbjct: 484 VVESICKERKLVHVFELL 501
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 40/280 (14%)
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV-LPDAFTYNILIGALWKEGKTREA 372
++ + +N+L+ CKN +N A+ EM + G+ P++ TY+ L+ L+ +++EA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 373 CYIL-GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
+ ++SK GI PD +++ VMI G C ++ RAK++L
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL-------------------- 291
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
D M K G +PNV+ Y+AL+ K G I A +E+ GL
Sbjct: 292 ---------------DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERY 551
D V Y L+ C D A++L EM R D ++Y ++R G ++EA +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 552 AKILKSGLMNDHVPVQILFNMYC---KLEEPVKAFNLFQD 588
+ G+ + +I+ N C +LE+ VK ++ +
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE 436
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 3/311 (0%)
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ-PNRVTCNILVHALCENGHLK 264
G PN +N L+K +C ++ A + M +GI PN +T + L+ L + K
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
EA ++ E++++ + PD VT V ++ + + E +A + + M++N +V Y+ L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
+NG CK + A E+ K G+ D Y L+ + G+T EA +LG M
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
D ++Y V++RGL + A ++L + + + +I++ ++ A+
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
+M + G+ P+ T+N L++ +SG + L GL P ++ ++ + C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 505 NLRS--HDFAL 513
R H F L
Sbjct: 490 KERKLVHVFEL 500
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV-HPNVFTYNAL-- 464
K LL+ N + P ++N+++ + + D++ A L + M + G+ +PN TY+ L
Sbjct: 181 KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 465 -ILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
+ AH +S A L E+M++K G+ PD VT+N++I C + A ++ M +
Sbjct: 241 CLFAHSRSK---EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 297
Query: 523 GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
G P++ +Y+ L+ C G +EA++ + ++ K+GL D V L N +C+ E +A
Sbjct: 298 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 357
Query: 583 FNLFQDWLESK 593
L + S+
Sbjct: 358 MKLLGEMKASR 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM-LNNLMVPKPIVWNLIID-LYGRCKDV 439
+G+ P+ + ++++ C + DI A ++ M + + P I ++ ++D L+ +
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
L D++ K G+ P+ T+N +I ++G + RA + + M G P+V Y+ L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ C + A Q E+ + G + D + YT L+ C G T EA + ++ S
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 560 MNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
D + ++ +A + W
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQW 399
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++ C + ++A + C GK++ A + + + G D + ++N C+ G
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
++A L+ EM + +TYN +++G + ++AL + G+ N+ +
Sbjct: 354 TDEAMK-LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 252 ILVHALCENGHLKEAKKML 270
I+++ALC NG L++A K L
Sbjct: 413 IILNALCCNGELEKAVKFL 431
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 175/432 (40%), Gaps = 81/432 (18%)
Query: 140 SYTEHAATVRLLCLEGKLEAAIRL-QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW 198
SY + L C + A+ + + GF T N +++ L K E +
Sbjct: 44 SYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWAL 103
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
+ R + +PN VT+ + K Y T + V +A+ Y + D ++ N LV ALC
Sbjct: 104 INRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALC 162
Query: 259 ENGHLKEAK-------------------------------------KMLEEILNDDKDIP 281
E+ H+ EA+ K + ++ +
Sbjct: 163 EHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTK 222
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
DL + +++MD K+ + +A L+ EM+ M++DVVAYN +I + +Q +
Sbjct: 223 DLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVF 282
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
EM ++G P+ T+N +I L ++G+ R+A +L M K G PD I+Y
Sbjct: 283 REMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM--------- 333
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
C+ + L P I+ L+GR M++ GV P + TY
Sbjct: 334 -----------CLFSRLEKPSE-----ILSLFGR-------------MIRSGVRPKMDTY 364
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
L+ + G + + + M G PD YN +I A D A + EM++
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 522 KG----HRPDLI 529
+G RP+L+
Sbjct: 425 RGLSPRRRPELV 436
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLW---CMLNNLMVPKPIVWNLII------DLYGRCK 437
DE S+ ++ LC + +V A+EL + + N V + NLI+ +G+CK
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
+ + T GV ++F+Y+ + KSG ++A L +EM ++ + DVV YN
Sbjct: 210 EYWKKMDTE------GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYN 263
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
+I A + +F +++ REM ++G P++ ++ +++ C G ++A ++ K
Sbjct: 264 TVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKR 323
Query: 558 GLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
G D + LF+ +LE+P + +LF
Sbjct: 324 GCQPDSITYMCLFS---RLEKPSEILSLF 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
+R CE + H ++LLC +G++ A R+ M ++G PD T+ +C
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSR 338
Query: 192 MEKAHD--WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVT 249
+EK + L M+ G P + TY L++ + + LY++ +M ++G P+
Sbjct: 339 LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA 398
Query: 250 CNILVHALCENGHLKEAKKMLEEILN---DDKDIPDLVTSTV 288
N ++ AL + G L A++ EE++ + P+LV ++
Sbjct: 399 YNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSL 440
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 130/304 (42%), Gaps = 37/304 (12%)
Query: 188 KVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
K G +EK + L + EFG P+ TYN LI G D AL L+ M ++P
Sbjct: 130 KCGELEKMKERL-SSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTG 187
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
VT L+H LC++ +KEA KM ++L
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDML--------------------------------- 214
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
+ + V Y LI LC+ ++ A+ E + + DA Y+ LI +L K G
Sbjct: 215 --KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
++ E IL MS+ G PD ++Y V+I G C + D A +L M+ + P I +N
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYN 332
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
+I+ ++ R K A + M + G P+ +Y + + A + +EML K
Sbjct: 333 MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Query: 488 GLFP 491
G P
Sbjct: 393 GYKP 396
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD T+N +++G + G + A L EM++ P VT+ TLI G C + V +AL
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALK-LFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 234 LYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
+ M G++P L+ ALC+ G L A K+ +E + + ST+ +
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL-ISS 267
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
K + + EM + + D V YNVLING C A EM++KG+ PD
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC----FDRDIVRAK 408
+YN+++G ++ K EA Y+ M + G PD +SY+++ GLC F+ V
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 409 ELLW 412
E+L+
Sbjct: 388 EMLF 391
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 7/219 (3%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
D YN+LI+G ++ + A EM+KK V P T+ LI L K+ + +EA +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 377 GVMSKM-GIVPDEISYKVMIRGLCFDRDIVRAKELL-WCMLNNLMVPKPIVWNLIIDLY- 433
M K+ G+ P Y +I+ LC ++ A +L + V I LI L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 434 -GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
GR +VS + + M + G P+ TYN LI + A + +EM+ KGL PD
Sbjct: 271 AGRSNEVS---MILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
V++YN+++G ++ + A L +M ++G PD +SY
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 53/338 (15%)
Query: 113 GSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGF 172
G LE+ M+E +S + + AC Y+ H + G + A++L MV+K
Sbjct: 132 GELEK---MKERLSSIDEFGKPDACTYNILIHGCSQ-----SGCFDDALKLFDEMVKKKV 183
Query: 173 LPDVFTHNHIVNGLCKVGLMEKA----HDWLVREMLEFGPLPNLVTYNTLIKGYCTVN-- 226
P T +++GLCK +++A HD L +G P + Y +LIK C +
Sbjct: 184 KPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKV----YGVRPTVHIYASLIKALCQIGEL 239
Query: 227 ---------------SVDKALY------------------LYSSMADTGIQPNRVTCNIL 253
VD A+Y + M++ G +P+ VT N+L
Sbjct: 240 SFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVL 299
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
++ C + A ++L+E++ PD+++ + + +F+ +++ +A L+ +M +
Sbjct: 300 INGFCVENDSESANRVLDEMVEKGLK-PDVISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
D ++Y ++ +GLC+ A EML KG P + L + GK
Sbjct: 359 CSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Query: 374 YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
++ + + GI D + VMI +C + I + +LL
Sbjct: 419 KVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
PDA TYNILI + G +A + M K + P +++ +I GLC D R KE
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDS---RVKEA 206
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
L + D++ +GV P V Y +LI A +
Sbjct: 207 LK-------------------------------MKHDMLKVYGVRPTVHIYASLIKALCQ 235
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL-RSHDFALQLRREMVQKGHRPDLI 529
G + A+ LK+E + D Y+ LI + RS++ ++ L EM +KG +PD +
Sbjct: 236 IGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILE-EMSEKGCKPDTV 294
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+Y L+ C+ +++ A ++++ GL D + ++ ++ ++++ +A LF+D
Sbjct: 295 TYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFED 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
LL + +VP I++ +I+ +GR K S A+ D M ++ V + N+L+ A +
Sbjct: 70 LLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALL 129
Query: 470 KSGNIYRAYSLKEEMLTKGLF--PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
K G + + +KE + + F PD TYN+LI D AL+L EMV+K +P
Sbjct: 130 KCGELEK---MKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPT 186
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV-QILFNMYCKLEEPVKAFNLF 586
+++ L+ C KEA + +LK + V + L C++ E AF L
Sbjct: 187 GVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 587 QDWLESK 593
+ E K
Sbjct: 247 DEAYEGK 253
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 2/237 (0%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
A V LC +G A L M +KG P+V T+N +++ C G A D L+R M+
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA-DQLLRHMI 72
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
E P++VT++ LI + V +A +Y M I P +T N ++ C+ +
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
+AK+ML+ + + PD+VT + ++ Y K + ++ EM + + + V Y L
Sbjct: 133 DAKRMLDSMASKGCS-PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
I+G C+ ++ A EM+ GV PD T++ ++ L + + R+A IL + K
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
D+V ST +D K+ I A +L+ EM + + +V+ YN +I+ C + + A
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
M++K + PD T++ LI A KE K EA I M + I P I+Y MI G C
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
+ AK +L M + P + ++ +I+ Y + K V N + M + G+ N TY
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
LI + G++ A L EM++ G+ PD +T++ ++ C+ +
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M Q+ ++ DVV +++ LCK+ A EM +KG+ P+ TYN +I + G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+A +L M + I PD +++ +I +R + A+E+ ML + P I +N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+ID + + V +A D M G P+V T++ LI + K+ + + EM +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
+ + VTY LI C + D A L EM+ G PD I++ ++ C + ++A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%)
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
M + + D ++ L K+G A + M + GI P+ ++Y MI C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
A +LL M+ + P + ++ +I+ + + + VS A ML++ + P TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
+I K + A + + M +KG PDVVT++ LI C + D +++ EM ++G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAF 583
+ ++YT L+ C G+ A++ +++ G+ D++ + C +E KAF
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 584 NLFQDWLESK 593
+ +D +S+
Sbjct: 241 AILEDLQKSE 250
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + E K+ A + + M++ P T+N +++G CK ++ A ++ M
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK-RMLDSMA 142
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
G P++VT++TLI GYC VD + ++ M GI N VT L+H C+ G L
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
A+ +L E+++ PD +T + +E +AF++ +++++
Sbjct: 203 AAQDLLNEMISCGV-APDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 192/464 (41%), Gaps = 33/464 (7%)
Query: 141 YTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLV 200
Y++ V LC GK M + G PD T ++ K +KA ++
Sbjct: 232 YSKGGLKVHALCWLGK----------MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK 281
Query: 201 REMLEFGPLPNLV-----TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ + + V TYNT+I Y + +A + M + GI P VT N ++H
Sbjct: 282 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH 341
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
NG L E +++ + PD T + + + KN + +A + + EM+ + ++
Sbjct: 342 IYGNNGQLGEVTSLMKTM--KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLK 399
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY- 374
D V+Y L+ ++ A G EM V D +T + L ++ E + E +
Sbjct: 400 PDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALT-RMYVEAEMLEKSWS 458
Query: 375 ------ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+ G MS G + +Y +R + E ++ + I +N+
Sbjct: 459 WFKRFHVAGNMSSEGYSANIDAYG--------ERGYLSEAERVFICCQEVNKRTVIEYNV 510
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+I YG K A + M+ +GV P+ TYN L+ + ++ E+M G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
D + Y +I + L + A ++ +EMV+ PD++ Y L+ GN ++A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ ++G+ + V L +Y K+ +A +++ L+S
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS 674
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
E++V+ YN+++ L K EM++KG+ P TY LI K G A
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 243
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL--WCMLNNL----MVPKPIVWNL 428
LG MSK+G+ PDE++ ++++ R+ +A+E W N + +N
Sbjct: 244 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+ID YG+ + A T ML+ G+ P T+N +I + +G + SL + M
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH- 362
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
PD TYN+LI + A +EM G +PD +SY L+ IR +EAE
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
A++ + D L MY + E K+++ F+
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK 461
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 114/523 (21%), Positives = 216/523 (41%), Gaps = 72/523 (13%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEK 194
+ C SYT + + G+++ A + M+++G +P T N +++ G + +
Sbjct: 293 HVCLSSYT-YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGE 351
Query: 195 AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
+ + ++ P+ TYN LI + N +++A + M D G++P+ V+ L+
Sbjct: 352 VTSLM--KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTST-----VFMDHYFKNREFIQAFSLWNEM 309
+A ++EA+ ++ E+ +D+ +I + S V + K+ + + F + M
Sbjct: 410 YAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM 469
Query: 310 RQNSMEVDVVAYN----------VLI-------NGLCKNQLMNLAYGY------ACE--- 343
++ AY V I + + +M AYG ACE
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFE 529
Query: 344 -MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
M+ GV PD TYN L+ L + L M + G V D I Y +I
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
+ A+E+ M+ + P +V+ ++I+ + +V A+ + M + G+ N YN
Sbjct: 590 QLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYN 649
Query: 463 ALILAHVKSGNIYRAYSLKEEML---TKGLFPDVVTYNLLI------------------- 500
+LI + K G + A ++ ++L K +PDV T N +I
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 501 ---GAA---------CNLRSH---DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
G A C + + + A Q+ ++M + D +SY ++ + G K
Sbjct: 710 KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFK 769
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
EA E + +++ SG+ D + L + KL KA ++
Sbjct: 770 EAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
+R LC G + L + +++G P + + +++G C++G + ++ M+ +
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE-VLHTMIAWN 278
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P++ Y +IKG C +A ++ ++ D G P+RV ++ CE G L A+
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
K+ E++ P+ V + +FK E + +NEM +N +++ N +I G
Sbjct: 339 KLWFEMIKKGMR-PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
C + + A+ M + GV P+A TYN LI KE K + + + +G+ P
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 388 EISYKVMIRGL 398
++Y ++R L
Sbjct: 458 GMAYAALVRNL 468
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 168/414 (40%), Gaps = 56/414 (13%)
Query: 132 LRGYACEYSYTEHAATVRLL---CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK 188
R Y YT ++ +L L+GK A + + GF P+ V L +
Sbjct: 100 FRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAK--SFLDTTGFKPEPTLLEQYVKCLSE 157
Query: 189 VGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRV 248
GL+E+A + + + + G ++VT N+++ G +D+ L+ M ++ R+
Sbjct: 158 EGLVEEAIE-VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI 216
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
C L+ ALC+ G + E ++L++ L D V
Sbjct: 217 RC--LIRALCDGGDVSEGYELLKQGLKQGLDPGQYV------------------------ 250
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC------EMLKKGVLPDAFTYNILIGA 362
Y LI+G C ++ N YAC M+ P + Y +I
Sbjct: 251 ------------YAKLISGFC--EIGN----YACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
L K EA I + G PD + Y MIRG C + A++L + M+ M P
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPN 352
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+N++I + + ++S + ML+ G + + N +I G A+ + +
Sbjct: 353 EFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFK 412
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
M G+ P+ +TYN LI C + L+L +E+ G +P ++Y LVR
Sbjct: 413 NMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 175/430 (40%), Gaps = 31/430 (7%)
Query: 140 SYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-- 197
SYTE A TV + E + R Q+ +V F + L L++ ++
Sbjct: 46 SYTEMAKTVSTIMRERQ-----RWQQTLVSD------FPSFDFADPLFFGELLKSQNNVL 94
Query: 198 ---WLVREMLE-FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
W R + + P V+ N L +V A S + TG +P
Sbjct: 95 FSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAA---KSFLDTTGFKPEPTLLEQY 151
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
V L E G ++EA ++ +L D +VT + K R+ + + L EM ++
Sbjct: 152 VKCLSEEGLVEEAIEVYN-VLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES- 209
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
E D LI LC ++ Y + LK+G+ P + Y LI + G
Sbjct: 210 -EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMS 268
Query: 374 YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL----MVPKPIVWNLI 429
+L M P Y+ +I+GLC ++ + A +C+ NL P +V+ +
Sbjct: 269 EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA----YCIFKNLKDKGYAPDRVVYTTM 324
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
I + + +A M+K G+ PN F YN +I H K G I + EML G
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 490 FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+++ N +I C+ D A ++ + M + G P+ I+Y L++ C ++ +
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLK 444
Query: 550 RYAKILKSGL 559
Y ++ GL
Sbjct: 445 LYKELKALGL 454
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 135/352 (38%), Gaps = 49/352 (13%)
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK--NREFI-- 300
P V+ NIL AL + +K AK L D ++ Y K + E +
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFL--------DTTGFKPEPTLLEQYVKCLSEEGLVE 162
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+A ++N ++ + VV N ++ G K + ++ + EM++ D+ LI
Sbjct: 163 EAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLI 220
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
AL G E +L K G+ P + Y +I G C + E+L M
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM------ 274
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
I WN P+++ Y +I + AY +
Sbjct: 275 ---IAWNHF--------------------------PSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+ + KG PD V Y +I C A +L EM++KG RP+ +Y ++
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
RG E Y ++L++G + + +C + +AF +F++ E+
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET 417
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 3/324 (0%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+ T+ +++ Y VD+A+Y ++ M + PN V N L+ ALC++ ++++A+++
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E + D+ PD T ++ ++ + K +A ++ EM D+V Y+++++ LCK
Sbjct: 227 ENM--RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++ A G M P F Y++L+ E + EA M + G+ D
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
+ +I C + +L M + + P N+I+ + A M+
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
K P+ TY +I + + A + + M KG+FP + T+++LI C R+
Sbjct: 405 KV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 511 FALQLRREMVQKGHRPDLISYTEL 534
A L EM++ G RP +++ L
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRL 487
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 154/346 (44%), Gaps = 43/346 (12%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K++ AI +M + P++ N +++ LCK + KA + V E + P+ TY
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE--VFENMRDRFTPDSKTY 240
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+ L++G+ ++ KA ++ M D G P+ VT +I+V LC+ G + EA ++ +
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM-- 298
Query: 276 DDKDI--PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D I P +V + Y +A + EM ++ M+ DV +N LI CK
Sbjct: 299 -DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
M Y EM KGV P++ + NI++ L + G+ EA + M K+ PD +Y +
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTM 416
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+I+ C +++ A + VW M K G
Sbjct: 417 VIKMFCEKKEMETADK---------------VWK--------------------YMRKKG 441
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
V P++ T++ LI + +A L EEM+ G+ P VT+ L
Sbjct: 442 VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
E L A + R M+ G PD+ T++ +V+ LCK G +++A +VR M P
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG-IVRSMDPSICKPTTF 308
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
Y+ L+ Y T N +++A+ + M +G++ + N L+ A C+ +K ++L+E
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE- 367
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ P+ + + + H + E +AF ++ +M + E D Y ++I C+ +
Sbjct: 368 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKE 426
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISY 391
M A M KKGV P T+++LI L +E T++AC +L M +MGI P +++
Sbjct: 427 METADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 164/339 (48%), Gaps = 4/339 (1%)
Query: 255 HALCENGHLKEAKKMLEEILN--DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
H + E+ K++ +++N K + ++ T + M Y + ++ +A +N M +
Sbjct: 138 HMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKY 197
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+ ++VA+N L++ LCK++ + A E ++ PD+ TY+IL+ KE +A
Sbjct: 198 DLPPNLVAFNGLLSALCKSKNVRKAQE-VFENMRDRFTPDSKTYSILLEGWGKEPNLPKA 256
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
+ M G PD ++Y +M+ LC + A ++ M ++ P ++++++
Sbjct: 257 REVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 316
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
YG + A+ T M + G+ +V +N+LI A K+ + Y + +EM +KG+ P+
Sbjct: 317 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYA 552
+ N+++ D A + R+M+ K PD +YT +++ C + + A++ +
Sbjct: 377 SKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWK 435
Query: 553 KILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ K G+ +L N C+ KA L ++ +E
Sbjct: 436 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 474
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 3/233 (1%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C ++ V +LC G+++ A+ + R M P F ++ +V+ +E+A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
D + EM G ++ +N+LI +C N + + M G+ PN +CNI++
Sbjct: 327 VDTFL-EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
L E G EA + +++ + PD T T+ + + + +E A +W MR+ +
Sbjct: 386 HLIERGEKDEAFDVFRKMIKVCE--PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ ++VLINGLC+ + A EM++ G+ P T+ L L KE +
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 122/243 (50%), Gaps = 3/243 (1%)
Query: 190 GLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT-GIQPNRV 248
G+ E AH L EM E + ++N L+ Y +D+A+ + + + GI P+ V
Sbjct: 136 GMAEHAHK-LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
T N ++ ALC G + + + EE+ + + PDL++ ++ +++ F++ +W+
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFE-PDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M+ ++ ++ +YN + GL +N+ A M +G+ PD TYN LI A +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
E M + G+ PD ++Y ++I LC D+ RA E+ + + ++ +P ++
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 429 IID 431
+++
Sbjct: 374 VVE 376
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 20/313 (6%)
Query: 262 HLKEAKKM--LEEILN-----DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
L+EAKK ++E+L DD D V + + Y E A L++EM + +
Sbjct: 96 RLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAE--HAHKLFDEMPELNC 153
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREAC 373
E V ++N L++ ++ ++ A E+ +K G+ PD TYN +I AL ++G +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 374 YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL-MVPKPIVWNLIIDL 432
I + K G PD IS+ ++ + R++ + +W ++ + + P +N +
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEF-YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
R K ++A+ D+M G+ P+V TYNALI A+ N+ EM KGL PD
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKG--HRPDLISYTELVRESCIRGNTKEAEER 550
VTY +LI C D A+++ E ++ RP++ Y +V G EA
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEA--- 387
Query: 551 YAKILKSGLMNDH 563
+++K+G + +
Sbjct: 388 -TQLVKNGKLQSY 399
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQK-GFLPDVFTHNHIVNGLCKVGLMEKA 195
CE + A + KL+ A++ + + +K G PD+ T+N ++ LC+ G M+
Sbjct: 153 CERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDI 212
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ E+ + G P+L+++NTL++ + + ++ M + PN + N V
Sbjct: 213 LS-IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
L N +A ++ +++ + PD+ T + Y + + +NEM++ +
Sbjct: 272 GLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
D V Y +LI LCK ++ A + E +K +L Y ++ L GK EA +
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Query: 376 L 376
+
Sbjct: 391 V 391
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 49/361 (13%)
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
+ + Y N +A ++ M + GI+P + L+H+LC+ H+ A +E
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHA----QEFFGKA 199
Query: 278 KD---IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
K +P T ++ + + + R+ A +++EM + + VD++AYN L++ LCK+ +
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ Y EM G+ PDA+++ I I A G A +L M + +VP+ ++ +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
I+ LC + + V +A L D M++ G
Sbjct: 320 IKTLC-----------------------------------KNEKVDDAYLLLDEMIQKGA 344
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
+P+ +TYN+++ H + RA L M PD TYN+++ + D A +
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 515 LRREMVQKGHRPDLISYT----ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
+ M ++ P + +YT LVR+ +G +EA + ++ G+ V++L
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRK---KGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Query: 571 N 571
N
Sbjct: 462 N 462
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 16/339 (4%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEA-----AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVG 190
A EY+Y E ++ V + A A R MV+ G P V + +++ LC
Sbjct: 128 AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKK 187
Query: 191 LMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC 250
+ A ++ + FG +P+ TY+ L++G+ + A ++ M + + +
Sbjct: 188 HVNHAQEFFGKAK-GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAY 246
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
N L+ ALC++G + KM +E+ N PD + +F+ Y + A+ + + M+
Sbjct: 247 NALLDALCKSGDVDGGYKMFQEMGNLGLK-PDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
+ + +V +N +I LCKN+ ++ AY EM++KG PD +TYN ++ +
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 371 EACYILGVMSKMGIVPDEISY----KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
A +L M + +PD +Y K++IR FD RA E+ M P +
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD----RATEIWEGMSERKFYPTVATY 421
Query: 427 NLIIDLYGRCK-DVSNAILTRDLMLKFGVHPNVFTYNAL 464
++I R K + A ++M+ G+ P T L
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 9/304 (2%)
Query: 278 KDIPDLVTST----VFMDHYFKNREFIQAFSLWNEMRQ-NSMEVDVVAYNVLINGLCKNQ 332
+ IPD S + ++ +++F + E R+ N E+ + ++ +
Sbjct: 93 RRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRAN 152
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
L + A M++ G+ P + L+ +L + A G GIVP +Y
Sbjct: 153 LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
+++RG RD A+++ ML V + +N ++D + DV M
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G+ P+ +++ I A+ +G+++ AY + + M L P+V T+N +I C D A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L EM+QKG PD +Y ++ C A + +++ ++ + P + +NM
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL----PDRHTYNM 388
Query: 573 YCKL 576
KL
Sbjct: 389 VLKL 392
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 171/393 (43%), Gaps = 38/393 (9%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
T + ++ L K G KA D + +G + + N+L+ NS++ A ++
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNR 297
+ DT I+P+ T NIL+H C+ +A+ M++ ++ + PD+VT T F++ Y K
Sbjct: 265 LFDT-IKPDARTFNILIHGFCKARKFDDARAMMD-LMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYN 357
+F + + EMR+N +VV Y ++++ L K++ + A G +M + G +PDA Y+
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG-LCFDRDIVRAKELLWCMLN 416
LI L K G+ ++A I M+ G+ D + Y MI L RD
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD------------- 429
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR 476
+ + L R +D PNV TY L+ +
Sbjct: 430 ----------EMALRLLKRMEDEEGE----------SCSPNVETYAPLLKMCCHKKKMKL 469
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
L M+ + DV TY LLI C + A E V+KG P + LV
Sbjct: 470 LGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Query: 537 ESCIRGNTKEAEERYAKILKSGLMND-HVPVQI 568
E + N EA+ + +++S M D H P+ +
Sbjct: 530 E-LEKKNMAEAKLKIQSLVQSKTMIDSHSPLSV 561
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 5/265 (1%)
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVVAYNVLINGLCKNQL 333
N++ + L T + M K+ ++ +A + EM ++ ++ D +A N L++ L K
Sbjct: 195 NEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENS 254
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ ++ + PDA T+NILI K K +A ++ +M PD ++Y
Sbjct: 255 IEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTS 313
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
+ C + D R E+L M N P + + +++ G+ K V+ A+ + M + G
Sbjct: 314 FVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG 373
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P+ Y++LI K+G A + E+M +G+ DV+ YN +I AA + + AL
Sbjct: 374 CVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMAL 433
Query: 514 QLRREMV-QKGH--RPDLISYTELV 535
+L + M ++G P++ +Y L+
Sbjct: 434 RLLKRMEDEEGESCSPNVETYAPLL 458
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 135/326 (41%), Gaps = 42/326 (12%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQK-GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ +R L GK A+ M + G D N +++ L K +E AH+ ++
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-- 264
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L P+ T+N LI G+C D A + M T P+ VT V A C+ G
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+ +MLEE+ + + P++VT T+ M K+++ +A ++ +M+++ D Y+
Sbjct: 325 RRVNEMLEEMRENGCN-PNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA------------LWK--EGKT 369
LI+ L K A +M +GV D YN +I A L K E +
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 370 REAC--------------------YILGV----MSKMGIVPDEISYKVMIRGLCFDRDIV 405
E+C +LG+ M K + D +Y ++IRGLC +
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIID 431
A + MVP+ +++D
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 3/250 (1%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C K + A + +M F PDV T+ V CK G + ++ L EM E G P
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML-EEMRENGCNP 341
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N+VTY ++ V +AL +Y M + G P+ + L+H L + G K+A ++
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 271 EEILNDDKDIPDLVTSTVFMD--HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
E++ N LV +T+ H+ ++ ++ + S +V Y L+
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
C + M L M+K V D TY +LI L GK EAC + G+VP +
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 521
Query: 389 ISYKVMIRGL 398
+ K+++ L
Sbjct: 522 STCKMLVDEL 531
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLK--KGVLPDAFTYNILIGALWKEGKTREACYILG 377
YN +++ L K + +L + EM K + L T + ++ L K GK +A
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 378 VMSK-MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M K G+ D I+ ++ L + I A E+ + + + P +N++I + +
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK-PDARTFNILIHGFCKA 286
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
+ +A DLM P+V TY + + A+ K G+ R + EEM G P+VVTY
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
+++ + + AL + +M + G PD Y+ L+ G K+A E + +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 557 SGLMND 562
G+ D
Sbjct: 407 QGVRRD 412
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
+GV + N+L+ A VK +I A+ + ++ + PD T+N+LI C R D
Sbjct: 233 YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDD 291
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A + M PD+++YT V C G+ + E ++ ++G + V I+ +
Sbjct: 292 ARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMH 351
Query: 572 MYCKLEEPVKAFNLFQDWLE 591
K ++ +A +++ E
Sbjct: 352 SLGKSKQVAEALGVYEKMKE 371
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 174/394 (44%), Gaps = 42/394 (10%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P VF + +V K+ +E D + + + + G +++T NTLI Y + + +D ++
Sbjct: 164 PLVF--DLLVQCYAKIRYLELGFD-VFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVW 219
Query: 234 -LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH 292
+Y D I PN +T I++ LC+ G LKE +L+ I + +P ++ +T +
Sbjct: 220 RIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGK-RCLPSVIVNTSLVFR 278
Query: 293 YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD 352
+ ++ SL + +M VD + Y++++ K + A EML++G +
Sbjct: 279 VLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSAN 338
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
+F Y + + ++G +EA +L M + G+ P + ++ +I G F R K L +
Sbjct: 339 SFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGG--FARFGWEEKGLEY 396
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
C ++M+ G+ P+ +N ++ + K
Sbjct: 397 C---------------------------------EVMVTRGLMPSCSAFNEMVKSVSKIE 423
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
N+ RA + + + KG PD TY+ LI D AL+L EM + P +
Sbjct: 424 NVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFR 483
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
L+ C G EA E+Y KI+K L+ + +
Sbjct: 484 SLIVGLCTCGKV-EAGEKYLKIMKKRLIEPNADI 516
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 21/361 (5%)
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS--------------- 286
GI+ +T +ILV A L +A+ ++E L + DLV S
Sbjct: 112 GIKSYALTIHILVKARL----LIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVF 167
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG-YACEML 345
+ + Y K R F ++ + + V+ N LI+ K+++ +L + Y C +
Sbjct: 168 DLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAID 227
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
K+ + P+ T I+I L KEG+ +E +L + +P I ++ + + I
Sbjct: 228 KR-IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
+ LL +L MV I +++++ + D+ +A D ML+ G N F Y +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
+ G++ A L EM G+ P T+N LIG + L+ MV +G
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 526 PDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
P ++ E+V+ N A E K + G + D L + + + +A L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 586 F 586
F
Sbjct: 467 F 467
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 181/413 (43%), Gaps = 51/413 (12%)
Query: 122 RENISLVKIGLRGYACEYSYTEH---AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFT 178
R ++ VKI L+ E Y +RL C G + A ++ +M+ G V
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV 249
Query: 179 HNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM 238
+ +V+G + G +KA D L +M++ G PNLVTY +LIKG+ + VD+A + S +
Sbjct: 250 WSMLVSGFFRSGEPQKAVD-LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 239 ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNRE 298
G+ P+ V CN+++H G +EA+K+ L K +PD T + + +
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS-LEKRKLVPDQYTFASILSSLCLSGK 367
Query: 299 FIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
F + + + + D+V N+L N K + A M K D +TY +
Sbjct: 368 FDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTV 424
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
+ AL + G R A KM YK+ I++ K+ L ++
Sbjct: 425 YLSALCRGGAPRAAI-------KM--------YKI----------IIKEKKHLDAHFHSA 459
Query: 419 MVPKPI---VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP-NVFTYNALILAHVKSGNI 474
++ I +N + L+ RC IL + +P +V +Y I V++ I
Sbjct: 460 IIDSLIELGKYNTAVHLFKRC------ILEK--------YPLDVVSYTVAIKGLVRAKRI 505
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
AYSL +M G++P+ TY +I C + + ++ RE +Q+G D
Sbjct: 506 EEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/494 (19%), Positives = 211/494 (42%), Gaps = 23/494 (4%)
Query: 106 ALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLE----GKL-EAA 160
A D+M+ G +E K+ RE S+ +I R + S E V LL LE G + + A
Sbjct: 74 AFDHMV-GVVE--KLTREYYSIDRIIER---LKISGCEIKPRVFLLLLEIFWRGHIYDKA 127
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
I + M GF+P+ N +++ K+ ++ A E+ E N +++ +
Sbjct: 128 IEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGA-----LEIFEGIRFRNFFSFDIALS 182
Query: 221 GYCTVNSVDKAL---YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
+C+ + + M G PNR ++ C G + EA +++ ++
Sbjct: 183 HFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSG 242
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+ V S + + +F++ E +A L+N+M Q ++V Y LI G +++ A
Sbjct: 243 ISVSVNVWS-MLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
+ ++ +G+ PD N++I + G+ EA + + K +VPD+ ++ ++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
LC + + + + + NL+ + + + S A+ +M +
Sbjct: 362 LCLSGKFDLVPRITHGIGTDFDL---VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALD 418
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+TY + A + G A + + ++ + D ++ +I + L ++ A+ L +
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
+ + + D++SYT ++ +EA + + G+ + + + + CK +
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK 538
Query: 578 EPVKAFNLFQDWLE 591
E K + ++ ++
Sbjct: 539 ETEKVRKILRECIQ 552
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF----GPLP 210
GK A L M Q+G +PD+ + N ++N K G + L E+L+ G P
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN---LAVELLDMVRNSGLRP 295
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ +TYNTL+ +++D A+ ++ M QP+ T N ++ G EA+++
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E L PD VT + + + R + ++ +M++ D + YN +I+ K
Sbjct: 356 ME-LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 331 NQLMNLAYGYACEMLK-KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
++LA +M G PDA TY +LI +L K +T EA ++ M +GI P
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDL 448
+Y +I G A++ CML + P + +++++D+ R + A L RD
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRD- 533
Query: 449 MLKFGVHPNVFTYNALILAHVK---SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
M+ G P+ Y +IL +K S +I + EE+ G+ P ++ L+ G +
Sbjct: 534 MISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC--GMNPLEISSVLVKGECFD 591
Query: 506 LRSHDFALQL 515
L + + +
Sbjct: 592 LAARQLKVAI 601
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 7/321 (2%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE--AKKMLEE 272
YN ++ Y KA L +M G P+ ++ N L++A ++G L A ++L+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ N PD +T + ++ A ++ +M + + D+ YN +I+ +
Sbjct: 288 VRNSGLR-PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
L A E+ KG PDA TYN L+ A +E T + + M KMG DE++Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 393 VMIRGLCFDRDIVRAKELLWCMLN-NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
+I + A +L M + P I + ++ID G+ A ML
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P + TY+ALI + K+G A ML G PD + Y++++
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 512 ALQLRREMVQKGHRPDLISYT 532
A L R+M+ GH P SYT
Sbjct: 527 AWGLYRDMISDGHTP---SYT 544
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 17/311 (5%)
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML-- 345
M Y ++ +F +A L + MRQ D++++N LIN K+ L A E+L
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG--GLTPNLAVELLDM 287
Query: 346 --KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR--GLCFD 401
G+ PDA TYN L+ A ++ A + M PD +Y MI G C
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC-- 345
Query: 402 RDIVRAKELLWCMLN-NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+ E L+ L P + +N ++ + R ++ M K G + T
Sbjct: 346 -GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLF---PDVVTYNLLIGAACNLRSHDFALQLRR 517
YN +I + K G + A L ++M KGL PD +TY +LI + A L
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
EM+ G +P L +Y+ L+ G +EAE+ ++ +L+SG D++ ++ ++ +
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 578 EPVKAFNLFQD 588
E KA+ L++D
Sbjct: 523 ETRKAWGLYRD 533
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 19/328 (5%)
Query: 114 SLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFL 173
++E L M+R + GLR A Y+ T +A R + L+ A+++ M
Sbjct: 281 AVELLDMVRNS------GLRPDAITYN-TLLSACSR----DSNLDGAVKVFEDMEAHRCQ 329
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PD++T+N +++ + GL +A L E+ G P+ VTYN+L+ + + +K
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAER-LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHY 293
+Y M G + +T N ++H + G L A ++ +++ PD +T TV +D
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA 353
K ++A +L +EM ++ + Y+ LI G K A ML+ G PD
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD------RDIVRA 407
Y++++ L + +TR+A + M G P Y++MI GL + + +R
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRD 568
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGR 435
E L C +N L + +V DL R
Sbjct: 569 MEEL-CGMNPLEISSVLVKGECFDLAAR 595
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 132/302 (43%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PDL T M Y + + +A +++N M ++ V + N+L++ LC + + Y
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
E+ G + +++ A + G E I M G +P Y++MI LC
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+ + A+ ++ M + +WN ++ +Y +D + + + G+ P+ T
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
YN LI+ + + Y L ++M GL P + TY LI A + + A QL E++
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 521 QKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
KG + D Y +++ S G+ +AE+ + +G+ + +L Y P
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 581 KA 582
+A
Sbjct: 1085 EA 1086
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR--AKELLWC 413
YN ++G + GK +A ++ M + G VPD IS+ +I + A ELL
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
+ N+ + P I +N ++ R ++ A+ + M P+++TYNA+I + + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
A L E+ KG FPD VTYN L+ A R+ + ++ ++M + G D ++Y
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 534 LVRESCIRGNTKEAEERYAKILK-SGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
++ +G A + Y + SG D + +L + K V+A L + L+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 147/349 (42%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y TL+ +A ++S + +G + + C +V C+ G + A +++ +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
T ++ Y K + + +A S+ +RQ+ D+ +N L++ +
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A M++ G P + NIL+ AL +G+ E ++ + MG + S +M
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
+ +I K++ M +P ++ ++I+L + K V +A + M +
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
+ +N+++ + + + + + + GL PD TYN LI C R +
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
L ++M G P L +Y L+ + ++AE+ + ++L GL D
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 158/389 (40%), Gaps = 1/389 (0%)
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
CK+G E AH + + + Y +I+ Y KA + ++ +G P+
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
T N L+ A + G + A+ + ++ D P + + + + + + + +
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS-PTVESINILLHALCVDGRLEELYVVV 845
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
E++ ++ + ++++ + + M G LP Y ++I L K
Sbjct: 846 EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
+ R+A ++ M + + + M++ D + ++ + + P +
Sbjct: 906 KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTY 965
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
N +I +Y R + L M G+ P + TY +LI A K + +A L EE+L+
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE 546
KGL D Y+ ++ + + S A +L + M G P L + L+ GN +E
Sbjct: 1026 KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQE 1085
Query: 547 AEERYAKILKSGLMNDHVPVQILFNMYCK 575
AE+ + + + + +P + + Y +
Sbjct: 1086 AEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYR--AYSLKE 482
V+N ++ +Y R S A D M + G P++ ++N LI A +KSG + A L +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
+ GL PD +TYN L+ A + D A+++ +M +PDL +Y ++ G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 543 NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
EAE + ++ G D V L + + K ++Q
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 164 QRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYC 223
QRI + G PD T+N ++ C+ E+ + L+++M G P L TY +LI +
Sbjct: 951 QRIK-ETGLEPDETTYNTLIIMYCRDRRPEEGY-LLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 224 TVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
+++A L+ + G++ +R + ++ ++G +A+K+L+ + N + P L
Sbjct: 1009 KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE-PTL 1067
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
T + M Y + +A + + ++ +E+ + Y+ +I+ +++ N E
Sbjct: 1068 ATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE 1127
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
M K+G+ PD + + A + E +L + +G
Sbjct: 1128 MKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/478 (18%), Positives = 176/478 (36%), Gaps = 74/478 (15%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
L R M+ G P + ++ GL K + +R+M E + L + L+KG
Sbjct: 530 LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQK-TIRDMEELCGMNPLEISSVLVKGE 588
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
C D A G + T ++ + +G EA ++LE +
Sbjct: 589 C----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKR 644
Query: 283 LVTSTVF------------MDHYFK------------------------NREFIQAFSLW 306
L+T + +D YF N + +A ++
Sbjct: 645 LITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVF 704
Query: 307 NEMRQNSMEVDVVAYNVLINGLCK-----------NQLMNLAYGYACEMLKKGVLPDAFT 355
+++R + E ++ CK NQ + +AC +
Sbjct: 705 SDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPM---------- 754
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL----CFDRDIVRAKELL 411
Y +I A K+ ++A ++G + + G PD ++ ++ C++R A+ +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYER----ARAIF 810
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKD--VSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
M+ + P P V ++ I L+ C D + + + + G + + ++ A
Sbjct: 811 NTMMRD--GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFA 868
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
++GNI+ + M G P + Y ++I C + A + EM + + +L
Sbjct: 869 RAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELA 928
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
+ +++ + K+ + Y +I ++GL D L MYC+ P + + L Q
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 44/367 (11%)
Query: 199 LVREMLEFGPL---PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
L+ EM + P P L + L++ + + + V KA+ + M G +P+ L+
Sbjct: 169 LIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLD 226
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
ALC++G +K+A K+ E++ P +L T + + + + ++A + +M +
Sbjct: 227 ALCKHGSVKDAAKLFEDM---RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 283
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
E D+V Y L++G M AY +M ++G P+A Y +LI AL K + EA
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+ M + D ++Y ++ G C W I Y
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFC-------------------------KWGKIDKCY- 377
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
+ D M+K G+ P+ TY +++AH K + L E+M PD+
Sbjct: 378 ---------IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
YN++I AC L A++L EM + G P + ++ ++ +G EA + + ++
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 555 LKSGLMN 561
+ GL +
Sbjct: 489 VTRGLFS 495
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 163/395 (41%), Gaps = 43/395 (10%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++ AI + M + GF PD + +++ LCK G ++ A L +M P+ NL +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK-LFEDMRMRFPV-NLRYFT 256
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+L+ G+C V + +A Y+ M + G +P
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEP------------------------------- 285
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
D+V T + Y + A+ L +MR+ E + Y VLI LCK M
Sbjct: 286 -----DIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI-LGVMSKMGIVPDEISYKVMI 395
A EM + D TY L+ K GK + CYI L M K G++P E++Y ++
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKI-DKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
EL+ M P ++N++I L + +V A+ + M + G+
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF--PDVVTYNLLIGAACNLRSHDFAL 513
P V T+ +I G + A +EM+T+GLF T LL+ + + A
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAK 519
Query: 514 QLRREMVQKGH-RPDLISYTELVRESCIRGNTKEA 547
+ + KG +++S+T + +G KEA
Sbjct: 520 DVWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 128 VKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLC 187
V + + Y CE + A V C GK++ + M++KG +P T+ HI+
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 188 KVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
K E+ + L+ +M + P++ YN +I+ C + V +A+ L++ M + G+ P
Sbjct: 404 KKESFEECLE-LMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDK-DIPDLVTSTVFMDHYFKNREFIQAFSLW 306
T I+++ L G L EA +E++ + T + ++ K+++ A +W
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Query: 307 NEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK 365
+ + + + E++V+++ + I+ L A Y EM++ +P T+ L+ L K
Sbjct: 523 SCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 41/277 (14%)
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKG---VLPDAFTYNILIGALWKEGKTREACY 374
+ Y ++ L K + +G EM K+ + P+ F +L+ ++A
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIE 204
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG 434
+L M K G PDE + ++ LC +G
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALC--------------------------------KHG 232
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
KD A L D+ ++F V+ FT +L+ + G + A + +M G PD+V
Sbjct: 233 SVKDA--AKLFEDMRMRFPVNLRYFT--SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIV 288
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
Y L+ N A L R+M ++G P+ YT L++ C +EA + + ++
Sbjct: 289 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ D V L + +CK + K + + D ++
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 2/302 (0%)
Query: 188 KVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNR 247
K G ++KA D + ++ F + + + NTLI ++KA + D ++PN
Sbjct: 128 KAGSVDKAID-VFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNS 186
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
V+ NIL+ + + A K+ +E+L + P +VT + +N + +A SL
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
+M + + + V + +L+ GLC N A +M +G P Y IL+ L K G
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
+ EA +LG M K I PD + Y +++ LC + + A +L M P +
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYR 365
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK 487
++ID + R +D + + + ML P T+ ++ +K GN+ A + E M K
Sbjct: 366 MMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKK 425
Query: 488 GL 489
L
Sbjct: 426 NL 427
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
EAA ++ M++ P V T+N ++ LC+ M KA L+ +M++ PN VT+
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS-LLEDMIKKRIRPNAVTFGL 261
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
L+KG C ++A L M G +P V IL+ L + G + EAK +L E +
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGE-MKKR 320
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
+ PD+V + ++H +A+ + EM+ + + Y ++I+G C+ + +
Sbjct: 321 RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
ML P T+ ++ L K G AC++L VM K + +++ ++
Sbjct: 381 LNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSD 440
Query: 398 LC 399
LC
Sbjct: 441 LC 442
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 137/330 (41%), Gaps = 36/330 (10%)
Query: 218 LIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
LI+ Y SVDKA+ ++ + + N L++ L +NG L++AK +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK----SFFDGA 177
Query: 278 KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
KD+ +R NS V++N+LI G A
Sbjct: 178 KDM---------------------------RLRPNS-----VSFNILIKGFLDKCDWEAA 205
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
EML+ V P TYN LIG L + +A +L M K I P+ +++ ++++G
Sbjct: 206 CKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
LC + AK+L++ M P + + +++ G+ + A L M K + P+
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
V YN L+ + AY + EM KG P+ TY ++I C + D L +
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLN 385
Query: 518 EMVQKGHRPDLISYTELVRESCIRGNTKEA 547
M+ H P ++ +V GN A
Sbjct: 386 AMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
+ N LI L G+ +A M + P+ +S+ ++I+G D A ++ M
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
L + P + +N +I R D+ A + M+K + PN T+ L+ G
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A L +M +G P +V Y +L+ D A L EM ++ +PD++ Y L
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESK 593
V C EA ++ G + +++ + +C++E+ N+ L S+
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + + L G+++ A L M ++ PDV +N +VN LC + +A
Sbjct: 286 GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ L EM G PN TY +I G+C + D L + ++M + P T +V
Sbjct: 346 YRVLT-EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVA 404
Query: 256 ALCENGHLKEAKKMLE 271
L + G+L A +LE
Sbjct: 405 GLIKGGNLDHACFVLE 420
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M +FG P+ ++N ++ + D+ ++ S G++ + NIL+ LCE+G+
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
L+ A ++L+E K P+++T + + + +F +AF L M + +E D + +N
Sbjct: 218 LEAALQLLDE-FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+LI+GL K + M KG P+ TY ++ L + + EA ++ M
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID-LYGRCKDVSN 441
G+ P +SYK M+ GLC + +V +L M+N+ VPK ++W ++ + + D S
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQ 396
Query: 442 AILTR 446
A L R
Sbjct: 397 ANLDR 401
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
++N ++N L +L + + K GV DA NILI L + G A +L
Sbjct: 169 SFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEF 228
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
+ P+ +++ +IRG C A +LL M + P I +N++I + V
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
I + M G PN TY ++ + A + +M++ G+ P ++Y +
Sbjct: 289 EEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKM 348
Query: 500 IGAACNLRS---HDFALQLRREMVQKGHRPDLISYTELVR 536
+ C +S D+ L R+MV G P + + ++V+
Sbjct: 349 VLGLCETKSVVEMDWVL---RQMVNHGFVPKTLMWWKVVQ 385
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR---EML 204
++ LC G LEAA++L Q+ P+V T + ++ G C G E+A L R E +
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
E P+ +T+N LI G V++ + L M G +PN T +++ L +
Sbjct: 269 E----PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 265 EAKKMLEEILN 275
EAK+M+ ++++
Sbjct: 325 EAKEMMSQMIS 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+ +R C +GK E A +L M ++ PD T N +++GL K G +E+ D L R +
Sbjct: 241 SPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKV 300
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G PN TY ++ G +A + S M G++P+ ++ +V LCE +
Sbjct: 301 K-GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVV 359
Query: 265 EAKKMLEEILN 275
E +L +++N
Sbjct: 360 EMDWVLRQMVN 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 35/212 (16%)
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
G P + ++N ++ L E I K+G+ D ++I+GLC ++ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
+LL D + + K PNV T++ LI
Sbjct: 222 LQLL-------------------DEFPQQKS----------------RPNVMTFSPLIRG 246
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
G A+ L E M + + PD +T+N+LI + + L M KG P+
Sbjct: 247 FCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+Y E++ + EA+E ++++ G+
Sbjct: 307 PGTYQEVLYGLLDKKRNLEAKEMMSQMISWGM 338
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 16/382 (4%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GKLE + ++ M + ++ + N I++ K+G ++ A L+ EM G P++VT
Sbjct: 138 GKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIG-LLDEMEICGLKPDIVT 192
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+N+L+ GY + A+ + M G++P+ + + L+ A+ E GHLK K + IL
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ + D+ T +D Y K A +++ M ++VA+N L++GL L+
Sbjct: 253 RN-QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLL 307
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A M K+G+ PDA T+N L GK +A ++G M + G+ P+ +S+ +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
G + + A ++ M + P + ++ + G + + L+ +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN-LLIGAACNLRSHDFAL 513
+ + AL+ + KSG++ A + + K L ++N +L+G A R + +
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEE-GI 482
Query: 514 QLRREMVQKGHRPDLISYTELV 535
M++ G PD I++T ++
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVL 504
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 18/416 (4%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D N IV + G EKA + L REM G T L++ + +
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVE-LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQI 111
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ + G++ N CN L+ NG L+ ++K + N KD +L + + Y
Sbjct: 112 HGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK----VFNSMKD-RNLSSWNSILSSYT 166
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K A L +EM ++ D+V +N L++G L A M G+ P
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
+ + L+ A+ + G + I G I+ +++ Y V + D I M
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGY-----ILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 415 LNNLMVPKPIV-WN-LIIDLYGRC--KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+ ++M K IV WN L+ L C KD + A++ R M K G+ P+ T+N+L +
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKD-AEALMIR--MEKEGIKPDAITWNSLASGYAT 338
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
G +A + +M KG+ P+VV++ + + AL++ +M ++G P+ +
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 531 YTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
+ L++ +E + L+ L+ D L +MY K + A +F
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 184/435 (42%), Gaps = 48/435 (11%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+L+ A + R M ++ DV N ++ C+ G E+A + LV+EM + G P LVT
Sbjct: 230 GELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVE-LVKEMEKEGISPGLVT 284
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE-- 272
+N LI GY + D A+ L M GI + T ++ L NG +A M +
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 273 ----------------------ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
++N ++ + F+D + +S ++
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL- 403
Query: 311 QNSMEV-------DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+++ +V DV +N +I G C+ AY M + P+ T+N +I
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 364 WKEGKTREACYILGVMSKMGIVP-DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
K G EA + M K G V + ++ ++I G + A EL M + +P
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDL---MLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+ I+ L C ++ A + R++ +L+ + NAL + KSG+I + +
Sbjct: 524 SVT---ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
+ M TK D++T+N LIG S+ AL L +M +G P+ + + ++
Sbjct: 581 IFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636
Query: 540 IRGNTKEAEERYAKI 554
+ GN E ++ + I
Sbjct: 637 LMGNVDEGKKVFYSI 651
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 182/447 (40%), Gaps = 53/447 (11%)
Query: 159 AAIRLQRIMVQKGFL---PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
+I L RI+ + L PDVF +++ K G + A R++ + NL T+
Sbjct: 95 GSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADA-----RKVFDSMRERNLFTW 149
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+ +I Y N + L+ M G+ P+ ++ C N EA K++ ++
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG-CANCGDVEAGKVIHSVVI 208
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
L S + Y K E A + MR E DV+A+N ++ C+N
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHE 264
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A EM K+G+ P T+NILIG + GK A ++ M GI D ++ MI
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPI------------------------------- 424
GL + +A ++ M +VP +
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 425 ----VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
V N ++D+Y +C + +A D + + +V+T+N++I + ++G +AY L
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH-RPDLISYTELVRESC 539
M L P+++T+N +I A+ L + M + G + + ++ ++
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPV 566
G EA E + K+ S M + V +
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTI 527
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 178/432 (41%), Gaps = 11/432 (2%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + E + +L R+M++ G LPD F I+ G G +E A + ++
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE-AGKVIHSVVI 208
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G L N+++ Y +D A + M + + + N ++ A C+NG +
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHE 264
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
EA ++++E + + P LVT + + Y + + A L +M + DV + +
Sbjct: 265 EAVELVKE-MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I+GL N + A +M GV+P+A T + A + + + KMG
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
+ D + ++ + A+++ + N + WN +I Y + A
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY----TWNSMITGYCQAGYCGKAYE 439
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG-LFPDVVTYNLLIGAA 503
M + PN+ T+N +I ++K+G+ A L + M G + + T+NL+I
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
D AL+L R+M P+ ++ L+ K E + +L+ L H
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH 559
Query: 564 VPVQILFNMYCK 575
L + Y K
Sbjct: 560 AVKNALTDTYAK 571
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 26/318 (8%)
Query: 257 LCENGHLKEAKKMLEEILNDDKDIP-----DLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
LC NG L EA+K L+ + + L+ S + R F L+ E
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE--- 112
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
DV L++ K + A M ++ + FT++ +IGA +E + RE
Sbjct: 113 ----PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWRE 164
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
+ +M K G++PD+ + +++G D+ K + ++ M V N I+
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 432 LYGRCKDVSNAILTRDLMLKFGV---HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+Y +C ++ D KF +V +N+++LA+ ++G A L +EM +G
Sbjct: 225 VYAKCGEL-------DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
+ P +VT+N+LIG L D A+ L ++M G D+ ++T ++ G +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 549 ERYAKILKSGLMNDHVPV 566
+ + K+ +G++ + V +
Sbjct: 338 DMFRKMFLAGVVPNAVTI 355
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
+ I V+ GF+ DV N +V+ K G +E A R++ + ++ T+N++I GY
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA-----RKVFDSVKNKDVYTWNSMITGY 428
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
C KA L++ M D ++PN +T N ++ +NG EA + + + D K +
Sbjct: 429 CQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMR-----QNSMEV--------------------- 316
T + + Y +N + +A L+ +M+ NS+ +
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Query: 317 -----DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
++ A + + N L + Y+ + D T+N LIG G
Sbjct: 549 CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL-MVPKPIVWNLII 430
A + M GI P+ + +I ++ K++ + + N+ ++P + ++
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 431 DLYGRCKDVSNAI 443
LYGR + A+
Sbjct: 669 YLYGRANRLEEAL 681
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN--ILVHALCENGHLKEAKK 268
+++T+N+LI GY S AL L++ M GI PNR T + IL H L G++ E KK
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM--GNVDEGKK 646
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
+ I ND IP L + + Y + +A EM S
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 18/321 (5%)
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL---CKNQLMNLAY 338
D+++ST +KN++F + + M++N+ V +V +VL+ L C+ L ++
Sbjct: 167 DILSST-----KYKNKQFRIVIDMLDYMKRNNKTVVLV--DVLLEILRKYCERYLTHVQK 219
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
+ ++ P+ +N+L+ AL K G +E +L M + + PD ++ V+ G
Sbjct: 220 FAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGW 278
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH--- 455
C RD +A +LL M+ P+ + ID + + V A D M+ G
Sbjct: 279 CRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA 338
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
P T+ +I+A K+ + L M++ G PDV TY +I C D A +
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
EM KG+ PD+++Y +R C T EA + Y ++++S +L +M+ +
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 576 LEEPVKAFNLFQDWLE-SKRD 595
+++P AFN W E KRD
Sbjct: 459 MDDPDGAFNT---WTEMDKRD 476
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 128/328 (39%), Gaps = 37/328 (11%)
Query: 162 RLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKG 221
+ +RI V+ P++ N +++ LCK GL+++ L R P N T+N L G
Sbjct: 222 KRKRIRVKTQ--PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDAN--TFNVLFFG 277
Query: 222 YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP 281
+C V KA+ L M + G +P T + C+ G + EA + + ++ +
Sbjct: 278 WCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYA 341
T + ++I L KN +
Sbjct: 338 APTAKT---------------------------------FALMIVALAKNDKAEECFELI 364
Query: 342 CEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
M+ G LPD TY +I + K EA L MS G PD ++Y +R LC +
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 424
Query: 402 RDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
R A +L M+ + P +N++I ++ D A T M K +V TY
Sbjct: 425 RKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGL 489
A+I A L EE++ KGL
Sbjct: 485 CAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
QP N+L+ ALC+ G +KE + +L + + K PD T V + + R+ +A
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK--PDANTFNVLFFGWCRVRDPKKAM 288
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL---PDAFTYNILI 360
L EM + + + Y I+ C+ +++ A M+ KG P A T+ ++I
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
AL K K E ++G M G +PD +YK +I G+C + A + L M N
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P + +N + + + A+ M++ P+V TYN LI + + A++
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
EM + DV TY +I + A L E+V KG
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 12/255 (4%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNT 217
EA +R R V+ PD T N + G C+V +KA L+ EM+E G P TY
Sbjct: 254 EALLRRMRHRVK----PDANTFNVLFFGWCRVRDPKKAMK-LLEEMIEAGHKPENFTYCA 308
Query: 218 LIKGYCTVNSVDKALYLYSSMADTG---IQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
I +C VD+A L+ M G P T +++ AL +N +E +++ ++
Sbjct: 309 AIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMI 368
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ +PD+ T ++ + +A+ +EM D+V YN + LC+N+
Sbjct: 369 STGC-LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A M++ P TYN+LI ++ A M K V D +Y M
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAM 487
Query: 395 IRGLCFDRDIVRAKE 409
I GL D RAKE
Sbjct: 488 INGLF---DCHRAKE 499
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFL---PDVFTHNHIVNGLCKVGLMEKAHDWLV 200
+ A + C G ++ A L M+ KG P T ++ L K E+ + L+
Sbjct: 306 YCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE-LI 364
Query: 201 REMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
M+ G LP++ TY +I+G C VD+A M++ G P+ VT N + LCEN
Sbjct: 365 GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCEN 424
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
EA K+ ++ + + P + T + + +F+ + AF+ W EM + DV
Sbjct: 425 RKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET 483
Query: 321 YNVLINGL 328
Y +INGL
Sbjct: 484 YCAMINGL 491
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C+ K++ A + M KG+ PD+ T+N + LC+ ++A R M+E P
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGR-MVESRCAP 444
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++ TYN LI + ++ D A ++ M + T +++ L + KEA +L
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLL 504
Query: 271 EEILNDDKDIPDLVTSTVFM 290
EE++N +P V + M
Sbjct: 505 EEVVNKGLKLPYRVFDSFLM 524
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 152/347 (43%), Gaps = 5/347 (1%)
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G PN+++Y L++ Y + A ++ M +G +P+ +T I++ E K
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 265 EAKKMLEEILNDDKDI--PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
EA+++ E +L++ K PD + + Y K + +A +++ M + V YN
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
L++ + ++ Y +M + + PD +Y +LI A + + EA + M
Sbjct: 287 SLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G+ P +Y +++ + +AK + M + + P + ++ Y D+ A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+ G PN+ TY LI + K+ ++ + + E+M G+ + ++ A
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+ ++ AL +EM G PD + L+ + + +EA+E
Sbjct: 464 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 510
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 140/311 (45%), Gaps = 7/311 (2%)
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+L+ A + G+ A+++L +L+ P++++ T M+ Y + + A +++ M+
Sbjct: 144 MLITAYGKLGNFNGAERVLS-VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLA---YGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ E + Y +++ + A + + K + PD Y+++I K G
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+A + M G+ ++Y + + F+ ++ M + + P + + L
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+I YGR + A+ + ML GV P YN L+ A SG + +A ++ + M
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
+FPD+ +Y ++ A N + A + + + G P++++Y L++ + ++
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 549 ERYAKILKSGL 559
E Y K+ SG+
Sbjct: 440 EVYEKMRLSGI 450
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 11/259 (4%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G E A ++ MV KG T+N +++ + K +D + R ++ P++V+
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ----PDVVS 316
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y LIK Y ++AL ++ M D G++P NIL+ A +G +++AK + + +
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS-M 375
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D+ PDL + T + Y + A + ++ + E ++V Y LI G K +
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM---GIVPDEISY 391
+M G+ + IL + G+ + LG +M G+ PD+ +
Sbjct: 436 EKMMEVYEKMRLSGIKANQ---TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 492
Query: 392 KVMIRGLCFDRDIVRAKEL 410
V++ ++ AKEL
Sbjct: 493 NVLLSLASTQDELEEAKEL 511
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 10/318 (3%)
Query: 275 NDDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMR-QNSMEVDVVAYNVLINGLCKNQ 332
+ D+ +P DLV T+ K + W +R QN + + +LI K
Sbjct: 96 DGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEW--LRYQNWWNFSEIDFLMLITAYGKLG 153
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
N A + K G P+ +Y L+ + + GK A I M G P I+Y+
Sbjct: 154 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 213
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVP-KP--IVWNLIIDLYGRCKDVSNAILTRDLM 449
++++ A+E+ +L+ P KP +++++I +Y + + A M
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
+ GV + TYN+L+ + + Y ++M + PDVV+Y LLI A R
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
+ AL + EM+ G RP +Y L+ I G ++A+ + + + + D +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 570 FNMYCKLEEPVKAFNLFQ 587
+ Y + A F+
Sbjct: 391 LSAYVNASDMEGAEKFFK 408
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
+V++Y L+ + N A M G P A TY I++ + K +EA +
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 377 GVM---SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
+ K + PD+ Y +MI + +A+++ M+ + + +N ++
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
K+VS D M + + P+V +Y LI A+ ++ A S+ EEML G+ P
Sbjct: 293 TSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
YN+L+ A + A + + M + PDL SYT ++ + + AE+ + +
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
I G + V L Y K + K +++
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 152/347 (43%), Gaps = 5/347 (1%)
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ G PN+++Y L++ Y + A ++ M +G +P+ +T I++ E K
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 265 EAKKMLEEILNDDKDI--PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
EA+++ E +L++ K PD + + Y K + +A +++ M + V YN
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
L++ + ++ Y +M + + PD +Y +LI A + + EA + M
Sbjct: 294 SLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
G+ P +Y +++ + +AK + M + + P + ++ Y D+ A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
+ G PN+ TY LI + K+ ++ + + E+M G+ + ++ A
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+ ++ AL +EM G PD + L+ + + +EA+E
Sbjct: 471 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 517
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 140/311 (45%), Gaps = 7/311 (2%)
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+L+ A + G+ A+++L +L+ P++++ T M+ Y + + A +++ M+
Sbjct: 151 MLITAYGKLGNFNGAERVLS-VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML---KKGVLPDAFTYNILIGALWKEGK 368
+ E + Y +++ + A +L K + PD Y+++I K G
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+A + M G+ ++Y + + F+ ++ M + + P + + L
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+I YGR + A+ + ML GV P YN L+ A SG + +A ++ + M
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
+FPD+ +Y ++ A N + A + + + G P++++Y L++ + ++
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 549 ERYAKILKSGL 559
E Y K+ SG+
Sbjct: 447 EVYEKMRLSGI 457
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G E A ++ MV KG T+N +++ + K +D + R ++ P++V+
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ----PDVVS 323
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y LIK Y ++AL ++ M D G++P NIL+ A +G +++AK + + +
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS-M 382
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK-NQL 333
D+ PDL + T + Y + A + ++ + E ++V Y LI G K N +
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM---GIVPDEIS 390
+ Y +M G+ + IL + G+ + LG +M G+ PD+ +
Sbjct: 443 EKMMEVYE-KMRLSGIKANQ---TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKA 498
Query: 391 YKVMIRGLCFDRDIVRAKEL 410
V++ ++ AKEL
Sbjct: 499 KNVLLSLASTQDELEEAKEL 518
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 10/318 (3%)
Query: 275 NDDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMR-QNSMEVDVVAYNVLINGLCKNQ 332
+ D+ +P DLV T+ K + W +R QN + + +LI K
Sbjct: 103 DGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEW--LRYQNWWNFSEIDFLMLITAYGKLG 160
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
N A + K G P+ +Y L+ + + GK A I M G P I+Y+
Sbjct: 161 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 220
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVP-KP--IVWNLIIDLYGRCKDVSNAILTRDLM 449
++++ A+E+ +L+ P KP +++++I +Y + + A M
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSH 509
+ GV + TYN+L+ + + Y ++M + PDVV+Y LLI A R
Sbjct: 281 VGKGVPQSTVTYNSLMSFETSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 510 DFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
+ AL + EM+ G RP +Y L+ I G ++A+ + + + + D +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 570 FNMYCKLEEPVKAFNLFQ 587
+ Y + A F+
Sbjct: 398 LSAYVNASDMEGAEKFFK 415
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
+V++Y L+ + N A M G P A TY I++ + K +EA +
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 377 GVM---SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY 433
+ K + PD+ Y +MI + +A+++ M+ + + +N ++
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 299
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
K+VS D M + + P+V +Y LI A+ ++ A S+ EEML G+ P
Sbjct: 300 TSYKEVSKIY---DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAK 553
YN+L+ A + A + + M + PDL SYT ++ + + AE+ + +
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 554 ILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
I G + V L Y K + K +++
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 144/329 (43%), Gaps = 7/329 (2%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q+ ++PD ++ +++ + K G A WL EM G P+ YN LI +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAM-WLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 229 DKAL-----YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
KAL YL QPN VT NIL+ A ++G + + + ++ L+ PD+
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD-LDMSPVSPDV 243
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
T MD Y KN + ++ MR N + D++ +NVLI+ K Q
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
+++ P T+N +I K +A ++ M+ M +P I+Y+ MI +
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+ RA+E+ + + V K N ++++Y R A F VHP+ TY
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 423
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
L A+ K+ + L ++M G+ P+
Sbjct: 424 LYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 9/228 (3%)
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC----KNQLMN 335
IPD + + K + A L++EM+ + D YN LI K + +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 336 LAYGYACEMLKKGV---LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
GY +M KG+ P+ TYNIL+ A + GK + + + + PD ++
Sbjct: 190 KVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++ + I + +L M +N P I +N++ID YG+ ++ T +++
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
P + T+N++I+ + K+ I +A + ++M P +TY +I
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 17/322 (5%)
Query: 282 DLVTSTVFMDHYF-------KNREFIQAFSLWNEMRQNSMEV-DVVAYNVLINGLCKNQL 333
D V DH F K+ +++Q ++ M++ + D Y+ LI+ + K
Sbjct: 89 DKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQ 148
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGA-LWKEGKTREACYILGVMSKMGIV----PDE 388
+A EM G PDA YN LI A L K + + G + KM + P+
Sbjct: 149 TRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNV 208
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN--AILTR 446
++Y +++R + + L + + + P +N ++D YG+ + A+LTR
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR 268
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M P++ T+N LI ++ K + + ++ P + T+N +I
Sbjct: 269 --MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
R D A + ++M + P I+Y ++ G+ A E + ++ +S + +
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 567 QILFNMYCKLEEPVKAFNLFQD 588
+ +YC+ ++A LF +
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHN 408
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 2/252 (0%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C+ + + +R GK++ L + + PDV+T N +++ K G++++
Sbjct: 204 CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
L R M P+++T+N LI Y +K + S+ + +P T N ++
Sbjct: 264 AVLTR-MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN 322
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
+ + +A+ + ++ +ND IP +T + Y +A ++ E+ ++ +
Sbjct: 323 YGKARMIDKAEWVFKK-MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
N ++ C+N L A V PDA TY L A K + ++
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILM 441
Query: 377 GVMSKMGIVPDE 388
M K GIVP++
Sbjct: 442 KKMEKDGIVPNK 453
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
W +P V++ +I + G+ A+ M G P+ YNALI AH+ +
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 472 GNIYRAYSLKEEMLTK--GL---FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ +A L K G+ P+VVTYN+L+ A D L +++ P
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
D+ ++ ++ G KE E ++ + D + +L + Y K +E K F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 587 QDWLESK 593
+ + SK
Sbjct: 302 KSLMRSK 308
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 290 MDHYFKNREFIQ-AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+D +R ++Q AF L+ R + + + +YN+L+ C N +++AY +ML++
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
V+PD +Y ILI ++G+ A +L M G VPD +SY ++ LC + A
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
+LL C+ + LK G +P++ YN +IL
Sbjct: 281 KLL------------------------CR----------MKLK-GCNPDLVHYNTMILGF 305
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
+ A + ++ML+ G P+ V+Y LIG C+ D + EM+ KG P
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSG 558
LV+ C G +EA + ++K+G
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 2/250 (0%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
L+ G L+ A L + G +P+ ++N ++ C + A+ L +MLE +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAY-QLFGKMLERDVV 222
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P++ +Y LI+G+C V+ A+ L M + G P+R++ L+++LC L+EA K+
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L + + PDLV + + + + A + ++M N + V+Y LI GLC
Sbjct: 283 LCRMKLKGCN-PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ + Y EM+ KG P N L+ GK EAC ++ V+ K G
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 401
Query: 390 SYKVMIRGLC 399
+++++I +C
Sbjct: 402 TWEMVIPLIC 411
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 130/314 (41%), Gaps = 55/314 (17%)
Query: 202 EMLEFGPLPNLVTYNTLI------KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+MLEF P N ++ +GY + KA L+ S G+ PN + N+L+
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGY-----LQKAFELFKSSRLHGVMPNTRSYNLLMQ 198
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
A C LNDD I A+ L+ +M + +
Sbjct: 199 AFC---------------LNDDLSI---------------------AYQLFGKMLERDVV 222
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
DV +Y +LI G C+ +N A +ML KG +PD +Y L+ +L ++ + REA +
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
L M G PD + Y MI G C + + A+++L ML+N P + + +I G
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG--GL 340
Query: 436 CK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
C D L M+ G P+ N L+ G + A + E ++ G
Sbjct: 341 CDQGMFDEGKKYLEE--MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 492 DVVTYNLLIGAACN 505
T+ ++I CN
Sbjct: 399 HSDTWEMVIPLICN 412
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
GV PN +YN L+ A + ++ AY L +ML + + PDV +Y +LI C + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
++L +M+ KG PD +SYT L+ C + +EA + ++ G D V +
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 573 YCKLEEPVKAFNLFQDWL 590
+C+ + + A + D L
Sbjct: 305 FCREDRAMDARKVLDDML 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK-SGNIYRAYSLKEE 483
++ +I +Y K + T ML+F P N ++ V G + +A+ L +
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
G+ P+ +YNLL+ A C A QL +M+++ PD+ SY L++ C +G
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 544 TKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
A E +L G + D + L N C+ + +A+ L
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 111 LKGSLERLKMMRENISLV-KIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQ 169
L SL R +RE L+ ++ L+G C + + C E + A ++ M+
Sbjct: 266 LLNSLCRKTQLREAYKLLCRMKLKG--CNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
G P+ ++ ++ GLC G+ ++ +L EM+ G P+ N L+KG+C+ V+
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYL-EEMISKGFSPHFSVSNCLVKGFCSFGKVE 382
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
+A + + G + T +++ +C ++ K LE+ + ++
Sbjct: 383 EACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEE 430
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 144/329 (43%), Gaps = 7/329 (2%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q+ ++PD ++ +++ + K G A WL EM G P+ YN LI +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAM-WLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 229 DKAL-----YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDL 283
KAL YL QPN VT NIL+ A ++G + + + ++ L+ PD+
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD-LDMSPVSPDV 243
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACE 343
T MD Y KN + ++ MR N + D++ +NVLI+ K Q
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
+++ P T+N +I K +A ++ M+ M +P I+Y+ MI +
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+ RA+E+ + + V K N ++++Y R A F VHP+ TY
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 423
Query: 464 LILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
L A+ K+ + L ++M G+ P+
Sbjct: 424 LYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 17/322 (5%)
Query: 282 DLVTSTVFMDHYF-------KNREFIQAFSLWNEMRQNSMEV-DVVAYNVLINGLCKNQL 333
D V DH F K+ +++Q ++ M++ + D Y+ LI+ + K
Sbjct: 89 DKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQ 148
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGA-LWKEGKTREACYILGVMSKMGIV----PDE 388
+A EM G PDA YN LI A L K + + G + KM + P+
Sbjct: 149 TRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNV 208
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN--AILTR 446
++Y +++R + + L + + + P +N ++D YG+ + A+LTR
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR 268
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M P++ T+N LI ++ K + + ++ P + T+N +I
Sbjct: 269 --MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
R D A + ++M + P I+Y ++ G+ A E + ++ +S + +
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 567 QILFNMYCKLEEPVKAFNLFQD 588
+ +YC+ ++A LF +
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHN 408
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 9/228 (3%)
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC----KNQLMN 335
IPD + + K + A L++EM+ + D YN LI K + +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 336 LAYGYACEMLKKGV---LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
GY +M KG+ P+ TYNIL+ A + GK + + + + PD ++
Sbjct: 190 KVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++ + I + +L M +N P I +N++ID YG+ ++ T +++
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
P + T+N++I+ + K+ I +A + ++M P +TY +I
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 134/325 (41%), Gaps = 18/325 (5%)
Query: 72 LMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIG 131
L+S +G+ Q +M + + +V+NAL + ++ K + +
Sbjct: 139 LISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK-------- 190
Query: 132 LRGY--------ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIV 183
+RGY C+ + + +R GK++ L + + PDV+T N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 184 NGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGI 243
+ K G++++ L R M P+++T+N LI Y +K + S+ +
Sbjct: 251 DAYGKNGMIKEMEAVLTR-MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
+P T N ++ + + +A+ + ++ +ND IP +T + Y +A
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKK-MNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
++ E+ ++ + N ++ C+N L A V PDA TY L A
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 364 WKEGKTREACYILGVMSKMGIVPDE 388
K + ++ M K GIVP++
Sbjct: 429 TKADMKEQVQILMKKMEKDGIVPNK 453
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
W +P V++ +I + G+ A+ M G P+ YNALI AH+ +
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 472 GNIYRAYSLKEEMLTK--GL---FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ +A L K G+ P+VVTYN+L+ A D L +++ P
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF 586
D+ ++ ++ G KE E ++ + D + +L + Y K +E K F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 587 QDWLESK 593
+ + SK
Sbjct: 302 KSLMRSK 308
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 184/442 (41%), Gaps = 36/442 (8%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+L A L M++ G D T N +++ G + +A L+++M E G P+ T
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES-LLKKMEEKGISPDTKT 377
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE-- 272
YN L+ + ++ AL Y + G+ P+ VT ++H LC+ + E + ++ E
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 273 ---ILNDDKDIP------------------------DLVTSTV----FMDHYFKNREFIQ 301
I D+ +P D V S+ +D Y + +++
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVE 497
Query: 302 AFSLWNEMRQNSMEV-DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A +++ R S + DV+ YNV+I K +L A M +G PD TYN L
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
L EA IL M G P +Y MI + A +L M +
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P +V+ +I+ + V AI +M + GV N +LI A+ K G + A +
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
++M PDV N ++ +L A + + +KG D+IS+ ++
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKG 736
Query: 541 RGNTKEAEERYAKILKSGLMND 562
G EA E ++ +SGL++D
Sbjct: 737 MGMLDEAIEVAEEMRESGLLSD 758
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 36/361 (9%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
++ A R+ M+ G P T+ ++ ++GL+ A D L M + G PN V Y
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD-LYEAMEKTGVKPNEVVYG 624
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+LI G+ V++A+ + M + G+Q N + L+ A + G L+EA+++ ++ + D
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK-MKD 683
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ PD+ S + +A S++N +R+ DV+++ ++ +++
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDE 742
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A A EM + G+L D ++N ++ +G+ E C + M ++ R
Sbjct: 743 AIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM-------------LVER 789
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
L D + L+ +L VP V L Y K ++ +T L G++
Sbjct: 790 KLLLDWGTFKT---LFTLLKKGGVPSEAVSQLQT-AYNEAKPLATPAITATLFSAMGLYA 845
Query: 457 NV----------------FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
F YNA+I + SG+I A M KGL PD+VT L+
Sbjct: 846 YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Query: 501 G 501
G
Sbjct: 906 G 906
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 195/482 (40%), Gaps = 64/482 (13%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI------- 219
M G LP T+ +V+ K GL+++A W ++ M + P+ VT T++
Sbjct: 171 MAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW-IKHMGQRMHFPDEVTMATVVRVFKNSG 229
Query: 220 ---------KGYCTVNSVDKALYLYSSMADTGIQPNRVTC-NILVHALCENGHLKEAKKM 269
KG+C VD L G + V L L + G +K
Sbjct: 230 EFDRADRFFKGWC-AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKS 288
Query: 270 LEEILNDDKDI--PDLVTS-TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
L D P L ++ +D Y K A +L++EM ++ + +D V +N +I+
Sbjct: 289 LHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH 348
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
+ ++ A +M +KG+ PD TYNIL+ G A + K+G+ P
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
Query: 387 DEISYKVMIRGLC--------------FDRDIVRAKELLWCMLNNLMVPKPIVWN----- 427
D ++++ ++ LC DR+ +R E ++ + V + +V
Sbjct: 409 DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF 468
Query: 428 ---------------LIIDLY---GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+ID+Y G + + M G +V YN +I A+
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM--SGQRNDVLEYNVMIKAYG 526
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLI 529
K+ +A SL + M +G +PD TYN L + D A ++ EM+ G +P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK---LEEPVKAFNLF 586
+Y ++ G +A + Y + K+G+ + V L N + + +EE ++ F +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 587 QD 588
++
Sbjct: 647 EE 648
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 185/468 (39%), Gaps = 37/468 (7%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L A L + M +KG PD T+N +++ G +E A ++ R++ + G P+ VT
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY-RKIRKVGLFPDTVT 412
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+ ++ C V + + + M I+ + + +++ G + +AK + E
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ 472
Query: 275 ND----------------DKDI------------------PDLVTSTVFMDHYFKNREFI 300
D +K + D++ V + Y K +
Sbjct: 473 LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
+A SL+ M+ D YN L L L++ A EML G P TY +I
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ + G +A + M K G+ P+E+ Y +I G + A + M + +
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
IV +I Y + + A D M P+V N+++ G + A S+
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
+ KG DV+++ ++ + D A+++ EM + G D S+ +++
Sbjct: 713 FNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 541 RGNTKEAEERYAKIL-KSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
G E E + ++L + L+ D + LF + K P +A + Q
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQ 819
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 144/358 (40%), Gaps = 57/358 (15%)
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
TV + + ++ F + S +V+ YN+++ L + + EM
Sbjct: 116 TVLLKEQTRWERVLRVFRFFQS--HQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAH 173
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR---------- 396
GVLP TY +L+ K G +EA + M + PDE++ ++R
Sbjct: 174 NGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR 233
Query: 397 ------GLC---FDRDI---------------VRAKELLWCMLNNLMVPKPI-------- 424
G C D D+ V K+ L L + PI
Sbjct: 234 ADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFAS 293
Query: 425 -------------VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
+N +IDLYG+ +++A MLK GV + T+N +I
Sbjct: 294 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH 353
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G++ A SL ++M KG+ PD TYN+L+ + + AL+ R++ + G PD +++
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH 413
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
++ C R E E A++ ++ + D V ++ MY V+A LF+ +
Sbjct: 414 RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 109/277 (39%), Gaps = 21/277 (7%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
+PN++ YN +++ D+ + MA G+ P T +LV + G +KEA
Sbjct: 142 VPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
++ + PD VT + + + EF +A + +++D+ + +
Sbjct: 202 WIKH-MGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNG 260
Query: 329 CKNQLMNLAYGYACEMLKKGVLPD--------------------AFTYNILIGALWKEGK 368
+NL + E+ K G T+N LI K G+
Sbjct: 261 SAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+A + M K G+ D +++ MI + A+ LL M + P +N+
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
++ L+ D+ A+ + K G+ P+ T+ A++
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 11/354 (3%)
Query: 223 CTVNSVDKALYLYS-SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP 281
T S + +L ++ + ++ P + L +L + + K+L+++ + DI
Sbjct: 86 ATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDIS 145
Query: 282 DLVTSTVFMDHYFKNREFIQAFSLWNEMRQN---SMEVDVVAYNVLINGLCKNQLMNLAY 338
T ++ Y KN QA L+N + + VDV YN L++ LC ++ + AY
Sbjct: 146 G-ETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAY 202
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
M++KG+ PD TY IL+ GK +EA L MS+ G P ++I GL
Sbjct: 203 ALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGL 262
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
+ AKE++ M VP +N++I+ + +V I K G+ ++
Sbjct: 263 LNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDI 322
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
TY LI A K G I A+ L + G P Y +I C D A +
Sbjct: 323 DTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSD 382
Query: 519 MVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
M K H P+ YT L+ G +A ++ + GL VP+ F+M
Sbjct: 383 MKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL----VPISRCFDM 432
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 2/263 (0%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ + + + + LC A L R M++KG PD T+ +VNG C G M++A
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
++L EM G P + LI+G ++ A + S M G P+ T NIL+
Sbjct: 237 QEFL-DEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
A+ ++G ++ +M + D+ T + K + +AF L N ++ +
Sbjct: 296 AISKSGEVEFCIEMYYTACKLGLCV-DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHK 354
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
Y +I G+C+N + + A+ + +M K P+ Y +LI + GK +A
Sbjct: 355 PFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANY 414
Query: 376 LGVMSKMGIVPDEISYKVMIRGL 398
L M++MG+VP + ++ GL
Sbjct: 415 LVEMTEMGLVPISRCFDMVTDGL 437
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 428 LIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
II+ YG+ V A+ L + G V YN+L+ A + AY+L M+
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKE 546
KGL PD TY +L+ C+ A + EM ++G P L+ G +
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 547 AEERYAKILKSGLMNDHVPVQILFNMYCKLEE 578
A+E +K+ K G + D IL K E
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 15/337 (4%)
Query: 261 GHLKEAKKMLE--EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
G K+ +M E E + DK + L T M + E+ +A +++ + + +E +
Sbjct: 132 GKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+ N+L++ LCK + + A + LK + P+A T+NI I K + EA + +
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M G P ISY +IR C + ++ E+L M N P I + I+ K+
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL-KEEMLTKGLFPDVVTYN 497
A+ M + G P+ YN LI ++G + A + + EM G+ + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGH-RPDLISYTELVRESCIRGNTKEAEERYAKILK 556
+I C+ D A++L +EM PD+ +Y L+R RG+ E K+LK
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV----GKLLK 425
Query: 557 SGLMNDHVPVQ-----ILFNMYCKLEEPVKAFNLFQD 588
+ H+ + L C+ A+ LF++
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 170/380 (44%), Gaps = 18/380 (4%)
Query: 189 VGLMEKAHDW-LVREMLEFGPLPNLVTYNT---LIKGYCTVNSVDKALYLYSSMADTGIQ 244
V ++ KA W ++E +E LVT NT +++ + ++A+ ++ + + G++
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
N + N+L+ LC+ +++A+ +L ++ P+ T +F+ + K +A
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIFIHGWCKANRVEEALW 245
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
EM+ + V++Y +I C+ Y EM G P++ TY ++ +L
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP-KP 423
+ + EA + M + G PD + Y +I L + A+ + + L V
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365
Query: 424 IVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+N +I +Y + AI L +++ +P+V TY L+ + K G++ L +
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425
Query: 483 EMLTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG----HRPDLISYTELVRE 537
EM+TK L D TY LI C ++A L EM+ + HR L L+ E
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL-----LLLE 480
Query: 538 SCIRGNTKEAEERYAKILKS 557
+ N E+ ER I+K+
Sbjct: 481 EVKKKNMHESAERIEHIMKT 500
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 160/374 (42%), Gaps = 41/374 (10%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
A +R G+ E A+ + + + G + + N +++ LCK +E+A L++ L
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ--L 216
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ PN T+N I G+C N V++AL+ M G +P ++ ++ C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
+ +ML E + + P+ +T T M +EF +A + M+++ + D + YN L
Sbjct: 277 KVYEMLSE-MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 325 INGLCK-NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
I+ L + +L + EM + GV + TYN +I + +A +L M
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 384 IV-PDEISYKVMIRGLCFDR-DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
+ PD +Y+ ++R CF R D+V +LL
Sbjct: 396 LCNPDVHTYQPLLRS-CFKRGDVVEVGKLL------------------------------ 424
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
++++ K + + TY LI ++ AY L EEM+++ + P T LL+
Sbjct: 425 ----KEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
Query: 502 AACNLRSHDFALQL 515
H+ A ++
Sbjct: 481 EVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 15/337 (4%)
Query: 261 GHLKEAKKMLE--EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
G K+ +M E E + DK + L T M + E+ +A +++ + + +E +
Sbjct: 132 GKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT 190
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+ N+L++ LCK + + A + LK + P+A T+NI I K + EA + +
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M G P ISY +IR C + ++ E+L M N P I + I+ K+
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL-KEEMLTKGLFPDVVTYN 497
A+ M + G P+ YN LI ++G + A + + EM G+ + TYN
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGH-RPDLISYTELVRESCIRGNTKEAEERYAKILK 556
+I C+ D A++L +EM PD+ +Y L+R RG+ E K+LK
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV----GKLLK 425
Query: 557 SGLMNDHVPVQ-----ILFNMYCKLEEPVKAFNLFQD 588
+ H+ + L C+ A+ LF++
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 170/380 (44%), Gaps = 18/380 (4%)
Query: 189 VGLMEKAHDW-LVREMLEFGPLPNLVTYNT---LIKGYCTVNSVDKALYLYSSMADTGIQ 244
V ++ KA W ++E +E LVT NT +++ + ++A+ ++ + + G++
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
N + N+L+ LC+ +++A+ +L ++ P+ T +F+ + K +A
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIFIHGWCKANRVEEALW 245
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
EM+ + V++Y +I C+ Y EM G P++ TY ++ +L
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305
Query: 365 KEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP-KP 423
+ + EA + M + G PD + Y +I L + A+ + + L V
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365
Query: 424 IVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+N +I +Y + AI L +++ +P+V TY L+ + K G++ L +
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK 425
Query: 483 EMLTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG----HRPDLISYTELVRE 537
EM+TK L D TY LI C ++A L EM+ + HR L L+ E
Sbjct: 426 EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL-----LLLE 480
Query: 538 SCIRGNTKEAEERYAKILKS 557
+ N E+ ER I+K+
Sbjct: 481 EVKKKNMHESAERIEHIMKT 500
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 160/374 (42%), Gaps = 41/374 (10%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
A +R G+ E A+ + + + G + + N +++ LCK +E+A L++ L
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ--L 216
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ PN T+N I G+C N V++AL+ M G +P ++ ++ C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
+ +ML E + + P+ +T T M +EF +A + M+++ + D + YN L
Sbjct: 277 KVYEMLSE-MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 325 INGLCK-NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
I+ L + +L + EM + GV + TYN +I + +A +L M
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 384 IV-PDEISYKVMIRGLCFDR-DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
+ PD +Y+ ++R CF R D+V +LL
Sbjct: 396 LCNPDVHTYQPLLRS-CFKRGDVVEVGKLL------------------------------ 424
Query: 442 AILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIG 501
++++ K + + TY LI ++ AY L EEM+++ + P T LL+
Sbjct: 425 ----KEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
Query: 502 AACNLRSHDFALQL 515
H+ A ++
Sbjct: 481 EVKKKNMHESAERI 494
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 320 AYNVLIN---GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
+YN +++ G+ + +L++ Y +ML+ G PD TYNI++ A ++ GKT +L
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYE---QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLL 280
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M K G PD +Y +++ L + A LL M + P I + +ID R
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
+ D +K G P+V Y +I ++ G + +A + +EM KG P+V TY
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
N +I C A L +EM +G P+ + Y+ LV G EA E +++
Sbjct: 401 NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
Query: 557 SG 558
G
Sbjct: 461 KG 462
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 146/348 (41%), Gaps = 42/348 (12%)
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGI---QPNRVTC 250
KA L+ EM++ G T+N LI CT A + + +P + +
Sbjct: 169 KAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
N ++H+L K + E++L +D PD++T + M F+ + + + L +EM
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ D+ YN+L++ L A M + GV P + LI L + GK
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
Y + K+G PD + Y VMI G ++ +A+E+
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF------------------- 385
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
M + G PNVFTYN++I +G A +L +EM ++G
Sbjct: 386 ----------------KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
P+ V Y+ L+ N A ++ ++MV+KGH LIS + R S
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRRS 477
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 2/277 (0%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+ +A RL M++ G+ T N ++ + GL + ++ F P +
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKT-FNYRPYKHS 224
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN ++ V ++Y M + G P+ +T NI++ A G ++L+E++
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D PDL T + + H + + A +L N MR+ +E V+ + LI+GL + +
Sbjct: 285 KDGFS-PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ E +K G PD Y ++I G+ +A + M++ G +P+ +Y M
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
IRG C A LL M + P +V++ +++
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 16/285 (5%)
Query: 140 SYTEHAATVRLL---CLEGKLEAAIRLQRIMVQK-GFLPDVFTHNHIVNGLCKVGLMEKA 195
Y A T LL C E L + Q I + + P ++N I++ L V K
Sbjct: 182 GYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK-QYKL 240
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
DW+ +MLE G P+++TYN ++ + D+ L M G P+ T NIL+H
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 256 ALCENGHLKEAKKMLE--EILNDDKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
HL K L +LN +++ P ++ T +D + + +E
Sbjct: 301 ------HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETV 354
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
+ DVV Y V+I G + A EM +KG LP+ FTYN +I GK +
Sbjct: 355 KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFK 414
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
EAC +L M G P+ + Y ++ L ++ A E++ M+
Sbjct: 415 EACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+LE A + + M +KG LP+VFT+N ++ G C G ++A L++EM G PN V
Sbjct: 376 GELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC-ALLKEMESRGCNPNFVV 434
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTG 242
Y+TL+ V +A + M + G
Sbjct: 435 YSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%)
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
+YN ++N L + L +ML+ G PD TYNIL+ ++ GK + M
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
++ G PD +Y +++ L + A L M + P + + +ID R ++
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
D M+K G P+V Y +I +V SG + +A + EM KG P+V TYN +
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
I C A L +EM +G P+ + Y+ LV G EA + +++K G
Sbjct: 401 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Query: 560 MNDHVP 565
VP
Sbjct: 461 YVHLVP 466
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 145/347 (41%), Gaps = 43/347 (12%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH-DWLVREMLEFGPLPNLV 213
G+ +A RL MVQ GF T N ++ + GL ++A ++ + + P +
Sbjct: 163 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKH-- 220
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+YN ++ V ++Y M + G P+ +T NIL+ G + ++ +E+
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
D PD T + + K + + A + N M++ ++ V+ Y LI+GL +
Sbjct: 281 ARDGFS-PDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ + EM+K G PD Y ++I G+ +A + M+ G +P+ +Y
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
MIRGLC + +E W L+ ++ R G
Sbjct: 400 MIRGLCMAGEF---REACW---------------LLKEMESR-----------------G 424
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG----LFPDVVTY 496
+PN Y+ L+ K+G + A + EM+ KG L P ++ Y
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 153 LEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNL 212
+ G+L+ A + R M KG LP+VFT+N ++ GLC G +A WL++EM G PN
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC-WLLKEMESRGCNPNF 429
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTG 242
V Y+TL+ + +A + M G
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%)
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
ML+ G P+V TYN L+ + + G + R L +EM G PD TYN+L+
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
AL M + G P ++ YT L+ GN + + +++K+G D V +
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 569 LFNMYCKLEEPVKAFNLFQD 588
+ Y E KA +F++
Sbjct: 365 MITGYVVSGELDKAKEMFRE 384
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 157/328 (47%), Gaps = 7/328 (2%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
NL +T+I Y + +A LY ++ +G+ +R+ +I+V + G L+EA +L
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 271 EEILNDDKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
E I+++ KDI PD+ + Y K + L+ +R++ + + YN +IN
Sbjct: 617 E-IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCA 675
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ ++ G EM++ G P+ T+N+L+ K ++ + + + G+V D I
Sbjct: 676 RALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVI 734
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN--AILTRD 447
SY +I ++D + M + +N ++D YG+ K + +IL R
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKR- 793
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M K P+ +TYN +I + + G I + +E+ GL PD+ +YN LI A
Sbjct: 794 -MKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 508 SHDFALQLRREMVQKGHRPDLISYTELV 535
+ A+ L +EM + PD ++YT LV
Sbjct: 853 MVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 4/308 (1%)
Query: 148 VRLLCLEGKLEAAIRLQRIM-VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
VR+ G LE A + IM QK +PDV+ ++ K L +K R + +
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYR-IRKS 658
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G N YN +I +D+ + M G PN VT N+L+ + K+
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++ +L + D+++ + Y KN+++ S M+ + V + AYN L++
Sbjct: 719 NELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
K++ M M K PD +TYNI+I ++G E +L + + G+ P
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
D SY +I+ + A L+ M ++P + + ++ R + AI
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWS 896
Query: 447 DLMLKFGV 454
M + G+
Sbjct: 897 LWMKQMGI 904
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 169/452 (37%), Gaps = 87/452 (19%)
Query: 180 NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA 239
N ++ K G ++ A W MLEFG PN+ T L+ Y +V++A + +S M
Sbjct: 214 NTVIYACTKKGNVKLASKWF-HMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREF 299
GI +CE+ + ++T + Y K E
Sbjct: 273 KFGI-------------VCESAY------------------SSMITIYTRLRLYDKAEEV 301
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
I M+Q+ + + + + V++N + M LA M G P+ YN L
Sbjct: 302 IDL------MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTL 355
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK----ELLWCML 415
I K K A + + +G+ PDE SY+ MI G + AK EL C
Sbjct: 356 ITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGY 415
Query: 416 NNLMVPKPIVWNL--IIDLYGRCKDVSNAILTRDLMLKFG-------------------- 453
KP +NL +I+L + D AI T + M G
Sbjct: 416 ------KPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKI 469
Query: 454 --------------VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
+ N ++++L++A+VK G + L E + + Y+LL
Sbjct: 470 DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLL 529
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
I + A+++ ++ +L + ++ + G EAE+ Y + SG+
Sbjct: 530 ICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGV 589
Query: 560 MNDHVPVQILFNMYCK---LEEPVKAFNLFQD 588
+ D + I+ MY K LEE + +
Sbjct: 590 VLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 159/385 (41%), Gaps = 43/385 (11%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
+GK+E A + M GF P++ +N ++ G K+ ME A L + G P+
Sbjct: 327 QGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG-LFHRLCNIGLEPDET 385
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+Y ++I+G+ ++ ++A + Y + G +PN L++ + G A K +E++
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
++ + + Y K + + N + ++ +++ L+ K+ +
Sbjct: 446 TGIGCQYSSIL--GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGM 503
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI------------LGVMSK 381
++ G E + ++ Y++LI + + G+ +A I L + S
Sbjct: 504 VDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITST 563
Query: 382 M-----------------------GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
M G+V D I + +++R + A +L M
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 419 -MVPKPIVWNLIIDLYGRC--KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
+VP ++ ++ +Y +C +D + R + K G+H N YN +I ++ +
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYR--IRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLI 500
EEM+ G P+ VT+N+L+
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLL 706
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 160/374 (42%), Gaps = 23/374 (6%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMA--DTGIQPNRVTCNILVHALCENGHLKEAKK 268
N ++++L+ Y VD L L D+ + + ++L+ + E+G L +A K
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESH--LYHLLICSCKESGQLTDAVK 544
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+ + D++I +TST+ +D Y EF +A L+ ++ + + +D + +++++
Sbjct: 545 IYNHKMESDEEINLHITSTM-IDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMY 603
Query: 329 CKNQLMNLAYGYACEML-----KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
K + AC +L +K ++PD + + ++ K + ++ + K G
Sbjct: 604 VKAGSLE----EACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSG 659
Query: 384 IVPDEISYKVMI----RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
I ++ Y +I R L D +E M+ P + +N+++D+YG+ K
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEE----MIRYGFTPNTVTFNVLLDVYGKAKLF 715
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
L + GV +V +YN +I A+ K+ + S + M G + YN L
Sbjct: 716 KKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ A + + + + M + PD +Y ++ +G E + ++ +SGL
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 560 MNDHVPVQILFNMY 573
D L Y
Sbjct: 835 GPDLCSYNTLIKAY 848
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 3/289 (1%)
Query: 302 AFSLWNEMRQNSMEV-DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF-TYNIL 359
A ++ MR N V + VAY++++ L + + + A E+ ++ +N +
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I A K+G + A +M + G+ P+ ++ M+ GL V E + +
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPN-VATIGMLMGLYQKNWNVEEAEFAFSHMRKFG 275
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+ ++ +I +Y R + A DLM + V + + ++ A+ + G + A S
Sbjct: 276 IVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
+ M G P+++ YN LI + + A L + G PD SY ++
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
N +EA+ Y ++ + G + + L N+ K + A +D
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIED 444
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 202/522 (38%), Gaps = 72/522 (13%)
Query: 111 LKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQK 170
L +L K M+E S+ C Y+ + + +LCL GK + A+ + +
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYN-----SLIHVLCLFGKAKDALIVWDELKVS 318
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
G PD T+ ++ G CK M+ A + EM G +P+ + YN L+ G V +
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMR-IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A L+ M G++ + T NIL+ L NG EA L L D +T ++
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGR-AEAGFTLFCDLKKKGQFVDAITFSIVG 436
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ + A L EM VD+V + L+ G K + + + ++
Sbjct: 437 LQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLV 496
Query: 351 PDAFTYNILIGALWKEGKTREACY---------ILGVMSKMG----------IVP---DE 388
P+ +N + A K ++++ Y L +MS +G + P D
Sbjct: 497 PNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDP 556
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW-----NLIIDLYGRCKDVSNAI 443
S + L R+ + K L + KP + N + +Y D+S A
Sbjct: 557 WSSSPYMDQLAHQRN--QPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLAC 614
Query: 444 LTRDLMLKFGVHP-NVFTYNALILAHVKSGNIYRAYSLKEEM------------------ 484
++ GV +TYN+++ + VK G A + ++M
Sbjct: 615 KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
Query: 485 ----------------LTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
LTK G + D+V YN LI A D A QL M G PD
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD 734
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
++SY ++ + G KEA + +L +G + +HV IL
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 12/273 (4%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE--------FGPLPNLVT 214
+++ K F D +++N ++G G ++ A L +EM E FGP ++ T
Sbjct: 235 FEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS-LFKEMKERSSVYGSSFGP--DICT 291
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN+LI C AL ++ + +G +P+ T IL+ C++ + +A ++ E +
Sbjct: 292 YNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE-M 350
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ +PD + +D K R+ +A L+ +M Q + YN+LI+GL +N
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ C++ KKG DA T++I+ L +EGK A ++ M G D ++ +
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWN 427
+ G ++L+ + +VP + WN
Sbjct: 471 LIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 169/391 (43%), Gaps = 26/391 (6%)
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
++ G+ ++ I +C+ GL+ + D L+ M E G + L+
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPD-LLGSMKEDGVNLDQTMAKILLDSLIRSGK 142
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
+ AL + M + G N + ++ AL + L+ A +L ++L + D T
Sbjct: 143 FESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGR 202
Query: 288 VFMDHYFKN-----------------REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
V + Y EF + F M++ + D +YN+ I+G
Sbjct: 203 VIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR--FKFDTWSYNICIHGFGC 260
Query: 331 NQLMNLAYGYACEMLKKGVL------PDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
++ A EM ++ + PD TYN LI L GK ++A + + G
Sbjct: 261 WGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
PD +Y+++I+G C + A + M N VP IV+N ++D + + V+ A
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
+ M++ GV + +TYN LI ++G ++L ++ KG F D +T++++ C
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 505 NLRSHDFALQLRREMVQKGHRPDLISYTELV 535
+ A++L EM +G DL++ + L+
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV--FMDHYFKNREFIQAFSLWNE 308
N + G L A K+ E I N + DL + T M + K F A + ++
Sbjct: 598 NTFLSIYLSKGDLSLACKLFE-IFNG-MGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQ 655
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M +N D+ YNV+I GL K +LA + K+G D YN LI AL K +
Sbjct: 656 MFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATR 715
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
EA + M GI PD +SY MI + A + L ML+ +P + +
Sbjct: 716 LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DT 774
Query: 429 IIDLYGR 435
I+D G+
Sbjct: 775 ILDYLGK 781
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 151/392 (38%), Gaps = 57/392 (14%)
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
Y+ + + C + + L SM + G+ ++ IL+ +L +G + A +L+
Sbjct: 93 TAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDY 152
Query: 273 ILNDDKDIPDLVTSTVF---MDHYFKNREFIQAFSLW--------NEMRQNSMEVDVVAY 321
+ +++ D + +V+ + K E A S+ N ++ V +V+Y
Sbjct: 153 M----EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY 208
Query: 322 -------NVLINGLCKNQLMNLAYGYACEMLK--KGVLPDAFTYNILIGALWKEGKTREA 372
N L+ GL + M + E LK K D ++YNI I G A
Sbjct: 209 LPGTVAVNELLVGLRRAD-MRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAA 267
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
+ E+ + + G F DI C N+L+ ++ L
Sbjct: 268 LSLF----------KEMKERSSVYGSSFGPDI--------CTYNSLI--------HVLCL 301
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
+G+ KD A++ D + G P+ TY LI KS + A + EM G PD
Sbjct: 302 FGKAKD---ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD 358
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYA 552
+ YN L+ R A QL +MVQ+G R +Y L+ G + +
Sbjct: 359 TIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFC 418
Query: 553 KILKSGLMNDHVPVQILFNMYC---KLEEPVK 581
+ K G D + I+ C KLE VK
Sbjct: 419 DLKKKGQFVDAITFSIVGLQLCREGKLEGAVK 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 65/418 (15%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVR--------- 201
LC GK+ A +L + ++ DV T H++ G K+G M +A + R
Sbjct: 56 LCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 202 -----------------EMLEFGPLP--NLVTYNTLIKGYCTVNSVDKALYLYSSMADTG 242
EML F +P N+V++NT+I GY +DKAL L+ M +
Sbjct: 112 WTAMVSGYLRSKQLSIAEML-FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
I V+ N +V AL + G + EA + E + D+V+ T +D KN + +A
Sbjct: 171 I----VSWNSMVKALVQRGRIDEAMNLFERMPR-----RDVVSWTAMVDGLAKNGKVDEA 221
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
L++ M E +++++N +I G +N ++ A M ++ D ++N +I
Sbjct: 222 RRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITG 273
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
+ + +AC + M + + IS+ MI G +++ A + ML + V K
Sbjct: 274 FIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSV-K 328
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDL--MLKFGVH-PNVFTYNALILAHVKSGNIYRAYS 479
P V + + C D++ + + + ++ VH N +AL+ + KSG + A
Sbjct: 329 PNV-GTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA-- 385
Query: 480 LKEEMLTKGLF--PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
+M GL D++++N +I + A+++ +M + G +P ++Y L+
Sbjct: 386 --RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
LVR + P + LI C V + +A L+ + + + VT ++
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGYI 88
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+ G ++EA+++ + + D + ++VT T + Y ++++ A L+ EM E +V
Sbjct: 89 KLGDMREARELFDRV--DSR--KNVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNV 140
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
V++N +I+G ++ ++ A EM ++ ++ ++N ++ AL + G+ EA +
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFER 196
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M + +V S+ M+ GL + + A+ L CM + I WN +I Y +
Sbjct: 197 MPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQ--- 245
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+N I D + + + ++N +I +++ + +A L + M K +V+++
Sbjct: 246 -NNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTT 300
Query: 499 LIGAACNLRSHDFALQLRREMVQKGH-RPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
+I + ++ AL + +M++ G +P++ +Y ++ E ++ + I KS
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 558 GLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRD 595
+ + L NMY K E + A +F + L +RD
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 203 MLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGH 262
M+ G P+ VT + ++ C VD+A L + + P+ T N L+ LC+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
L + ++E+ +D PDLV+ T+ +D+ ++ +A L +++ + D YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
++ G C + A G +M ++GV PD TYN LI L K G+ EA L M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 383 GIVPDEISYKVMIRGLC 399
G PD +Y ++ G+C
Sbjct: 330 GYEPDTATYTSLMNGMC 346
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 131/271 (48%), Gaps = 15/271 (5%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGP--LPNLVTYNTLIKGYC-----TVNS 227
D+ HN ++ + ++ L + +L+ P P T+ L+ C ++++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTV-KLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
V + L L M + G++P++VT +I V +LCE G + EAK +++E L + PD T
Sbjct: 143 VHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYN 198
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ H K ++ + +EMR + ++ D+V++ +LI+ +C ++ + A ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
G PD F YN ++ K EA + M + G+ PD+I+Y +I GL +
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
A+ L M++ P + +++ G C+
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMN--GMCR 347
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 162 RLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKG 221
R+ +MV G PD T + V LC+ G +++A D L++E+ E P+ TYN L+K
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD-LMKELTEKHSPPDTYTYNFLLKH 203
Query: 222 YCTVNSVDKALYLYSSMADT-GIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI 280
C + M D ++P+ V+ IL+ +C + +L+EA ++ ++ N
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK- 262
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PD M + + +A ++ +M++ +E D + YN LI GL K + A Y
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEG 367
M+ G PD TY L+ + ++G
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSM--ADTGIQPNRVTCNILVHALCE--NGHLKEA 266
+L +N++++ Y ++ V+ + L+ + + +P R T IL+ C + +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
++L ++N+ + PD VT+ + + + +A L E+ + D YN L+
Sbjct: 144 HRVLNLMVNNGLE-PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 327 GLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
LCK + +++ Y + EM V PD ++ ILI + REA Y++ + G
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
PD Y +++G C + + E + +Y + K+
Sbjct: 263 PDCFLYNTIMKGFC---TLSKGSE-------------------AVGVYKKMKEE------ 294
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC 504
GV P+ TYN LI K+G + A + M+ G PD TY L+ C
Sbjct: 295 -------GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
VR LC G+++ A L + + +K PD +T+N ++ LCK + ++++ +F
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA- 266
P+LV++ LI C ++ +A+YL S + + G +P+ N ++ C EA
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 267 ---KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
KKM EE + PD +T + K +A M E D Y
Sbjct: 286 GVYKKMKEEGVE-----PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 324 LINGLCK 330
L+NG+C+
Sbjct: 341 LMNGMCR 347
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 294 FKNREFIQAFSLWNEMRQNS-MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK--KGVL 350
FK+ A SL+N + S + +D+ +N ++ ++N +LK
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 351 PDAFTYNILIGALWK--EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
P T+ IL+ + + +L +M G+ PD+++ + +R LC + AK
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK-FGVHPNVFTYNALILA 467
+L+ + P +N ++ +CKD+ D M F V P++ ++ LI
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
S N+ A L ++ G PD YN ++ C L A+ + ++M ++G PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
I+Y L+ G +EA ++ +G D L N C+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
M+ G+ PD T +I + +L + G+ EA ++ +++ PD +Y +++ LC +D
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 404 IVRAKELLWCMLNNLMV-PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
+ E + M ++ V P + + ++ID K++ A+ + G P+ F YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
++ A + ++M +G+ PD +TYN LI + A + MV
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 523 GHRPDLISYTELVRESCIRG 542
G+ PD +YT L+ C +G
Sbjct: 330 GYEPDTATYTSLMNGMCRKG 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
+C L A+ L + GF PD F +N I+ G C + +A + ++M E G P
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV-GVYKKMKEEGVEP 298
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
+ +TYNTLI G V++A +M D G +P+ T L++ +C G
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+SN +LM+ G+ P+ T + + + ++G + A L +E+ K PD TYN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 499 LIGAACNLRS----HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
L+ C + ++F ++R + K PDL+S+T L+ C N +EA +K+
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+G D + +C L + +A +++ E
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 50/357 (14%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA---- 266
NL N LI + + A ++S + G PN T + + ALC+ + A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 267 KKMLEE-ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN--EMRQNSMEVDVVAYNV 323
+KML+ +L++ + + +++T + K + +A+S++ + ++ S+ VA
Sbjct: 290 EKMLKSGVLSEGEQMGNIIT------WFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--T 341
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
LI LCKN + +A EML G L E + R G
Sbjct: 342 LITALCKN---DGTITFAQEML---------------GDLSGEARRR------------G 371
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
I P + +I LC R++ AK LL M++ P V+NL++ + D+ A
Sbjct: 372 IKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 427
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
LM G+ P+V+TY +I + K G + A + E K VTY+ LI
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG-NTKEAEERYAKILKSGL 559
C + +D AL+L EM + G +P+ Y +L++ C++ + ++AE + ++ + GL
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 49/352 (13%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW---LVREMLEFGPLPN 211
GK +AA + + GF P+ T+ + LCK M DW + +ML+ G L
Sbjct: 245 GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFM----DWACSVCEKMLKSGVLSE 300
Query: 212 LVTYNTLIKGYCTVNSVDKALYLY--SSMADTGIQPNRVTCNILVHALCEN-GHLKEAKK 268
+I +C ++A +Y + + + P V L+ ALC+N G + A++
Sbjct: 301 GEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT--LITALCKNDGTITFAQE 358
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
ML ++ + + R I+ FS DV I+ L
Sbjct: 359 MLGDLSGEAR------------------RRGIKPFS------------DV------IHSL 382
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
C+ + + A +M+ KG P +N+++ A K G EA +L +M G+ PD
Sbjct: 383 CRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDV 442
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
+Y V+I G + A+E+L P+ ++ +I Y + ++ A+ +
Sbjct: 443 YTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNE 502
Query: 449 MLKFGVHPNVFTYNALILAH-VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
M +FGV PN YN LI + +K+ + +A L EEM KGL + ++ L+
Sbjct: 503 MDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 40/290 (13%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
AF ++++ + + Y + + LCK M+ A +MLK GVL + +I
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 362 ALWKEGKTREA--CYILGVMSKMGIVPDEISYKVMIRGLCF-DRDIVRAKELLWCMLNNL 418
KEGK EA Y L + + P ++ +I LC D I A+E+L
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLG------ 361
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
DL G + + G+ P ++ +I + + N+ A
Sbjct: 362 ------------DLSGEAR-------------RRGIKP----FSDVIHSLCRMRNVKDAK 392
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRES 538
+L +M++KG P +NL++ A D A ++ + M +G +PD+ +YT ++
Sbjct: 393 ALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGY 452
Query: 539 CIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
G EA+E A+ K V L YCK+EE +A L +
Sbjct: 453 AKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNE 502
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 17/273 (6%)
Query: 138 EYSYTEHAATVRL----LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
E+ +T +A T L LC ++ A + M++ G L + +I+ CK G E
Sbjct: 259 EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAE 318
Query: 194 KAHD-WLVREMLEFGPLPNLVTYNTLIKGYC----TVNSVDKALYLYSSMADT-GIQPNR 247
+A+ + + + E P V TLI C T+ + L S A GI+P
Sbjct: 319 EAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKP-- 374
Query: 248 VTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWN 307
+ ++H+LC ++K+AK +L ++++ P + + K + +A +
Sbjct: 375 --FSDVIHSLCRMRNVKDAKALLLDMISKGP-APGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 308 EMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
M ++ DV Y V+I+G K +M+ A E KK TY+ LI K
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+ EA +L M + G+ P+ Y +I+ C
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 172/401 (42%), Gaps = 55/401 (13%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
LE ++ ++++ GF+ DV+ N +++ K+G W ++ E P ++V++N
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA-----WDAEKVFEEMPERDIVSWN 200
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
++I GY + +L L+ M G +P+R + + A K K++ +
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
+ D++ T +D Y K E A ++N M Q ++VA+NV+I +N +
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR----NIVAWNVMIGCYARNGRVTD 316
Query: 337 AYGYACEMLKK-GVLPDAFT-YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A+ +M ++ G+ PD T N+L + EG+T I M
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILEGRT-------------------IHGYAM 357
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
RG +P ++ +ID+YG C + +A + D M
Sbjct: 358 RRGF---------------------LPHMVLETALIDMYGECGQLKSAEVIFDRM----A 392
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
NV ++N++I A+V++G Y A L +E+ L PD T ++ A S +
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKIL 555
+ +V+ + + I LV + G+ ++A + + IL
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 140/354 (39%), Gaps = 58/354 (16%)
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
++G K A+ +L + K + D T + + +R A L++EM + D
Sbjct: 41 DSGISKPARLVLRDRYKVTKQVNDPAL-TRALRGFADSRLMEDALQLFDEMNK----ADA 95
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
+NV+I G L A + M+ GV D FTY +I ++ E I +
Sbjct: 96 FLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAM 155
Query: 379 MSKMGIVPDEISYKVMIR-----GLCFDRDIVRAKELLWCMLNNLMVPKPIV-WNLIIDL 432
+ K+G V D +I G +D + V + M + IV WN +I
Sbjct: 156 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE----------MPERDIVSWNSMISG 205
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVF-TYNAL-------------------ILAHVKSG 472
Y D ++++ MLK G P+ F T +AL + + +++G
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 473 NI------------YRAYSLKEEMLTKGLFPDVVTYNLLIGA-ACNLRSHDFALQLRREM 519
++ Y S E + + ++V +N++IG A N R D L ++
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
Q G +PD+I+ L+ S I E + ++ G + V L +MY
Sbjct: 326 EQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 144/367 (39%), Gaps = 52/367 (14%)
Query: 158 EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME--KAHDWLVREMLEFGPLPNLVTY 215
+A + Q++ Q G PDV T +N L ++E H + +R G LP++V
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITS---INLLPASAILEGRTIHGYAMRR----GFLPHMVLE 368
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
LI Y + A ++ MA + N ++ N ++ A +NG A ++ +E L
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMA----EKNVISWNSIIAAYVQNGKNYSALELFQE-LW 423
Query: 276 DDKDIPDLVTSTVFMDHYFKN------REFIQAFSLWNEMRQNSMEV------------- 316
D +PD T + Y ++ RE I A+ + + N++ +
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGRE-IHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 317 -------------DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
DVV++N +I + ++ EM+ V P+ T+ L+ A
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 364 WKEGKTREAC-YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
G E Y + + GI P Y M+ + + AK L M VP
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM---PFVPT 599
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
+W +++ KD++ A + + K H N Y L+ + ++G +K
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKME-HDNTGCYVLLLNMYAEAGRWEDVNRIKL 658
Query: 483 EMLTKGL 489
M +KG+
Sbjct: 659 LMESKGI 665
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 168/413 (40%), Gaps = 11/413 (2%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
+CE + A+ +R G+LE AI L + + + + + + ++ + K +E A
Sbjct: 76 SCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA 135
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ + + N L+K C VN D A ++ M G P+R + IL+
Sbjct: 136 CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMK 195
Query: 256 ALCENGHLKEAKKMLEEI---LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
C G L+EA +L + ++ D+V + +D E A + ++ +
Sbjct: 196 GFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 313 SMEVDVVAYNVLING--LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ Y+ + G ++ + E L +G +P +Y+ + L++EGK
Sbjct: 256 GLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLV 315
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL-WCMLNNLMVPKPIVWNLI 429
E +L M G P Y ++ LC + A ++ M+ +P V+N++
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 430 IDLYGRCKD---VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
I G C D + + + + N TY L+ + G A + EEML
Sbjct: 376 IK--GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLI 433
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
K FP V TY+++I C++ A+ EMV + P+ + L C
Sbjct: 434 KSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 21/352 (5%)
Query: 60 WEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLK 119
WE + +++ N LM + CQ+N D +S + +G + ++ ++KG K
Sbjct: 146 WEVNSRITALNLLMKVL---CQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 120 MMRENISLVKIGLRGYACEYSYTEHAATVRLL----CLEGKLEAAIRLQRIMVQKGFLPD 175
+ L + R + E R+L C G+++ AI + +++KG
Sbjct: 203 LEEATHLLYSMFWR--ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 176 VFTHNHIVNGLCKVGLMEKAHDWLVR------EMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
++HI + G E + + + R E L G +P L +Y+ + +
Sbjct: 261 KRCYHHI-----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLV 315
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
+ + +M G +P V ALC G LKEA ++ + + +P + V
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 290 MDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+ + + ++A +M +Q S + Y L++GLC++ A EML K
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
P TY+++I L + EA L M +VP+ +K + +CF
Sbjct: 436 HFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 168/413 (40%), Gaps = 11/413 (2%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
+CE + A+ +R G+LE AI L + + + + + + ++ + K +E A
Sbjct: 76 SCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA 135
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+ + + N L+K C VN D A ++ M G P+R + IL+
Sbjct: 136 CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMK 195
Query: 256 ALCENGHLKEAKKMLEEI---LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
C G L+EA +L + ++ D+V + +D E A + ++ +
Sbjct: 196 GFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 313 SMEVDVVAYNVLING--LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ Y+ + G ++ + E L +G +P +Y+ + L++EGK
Sbjct: 256 GLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLV 315
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL-WCMLNNLMVPKPIVWNLI 429
E +L M G P Y ++ LC + A ++ M+ +P V+N++
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 430 IDLYGRCKD---VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
I G C D + + + + N TY L+ + G A + EEML
Sbjct: 376 IK--GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLI 433
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
K FP V TY+++I C++ A+ EMV + P+ + L C
Sbjct: 434 KSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 21/352 (5%)
Query: 60 WEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLK 119
WE + +++ N LM + CQ+N D +S + +G + ++ ++KG K
Sbjct: 146 WEVNSRITALNLLMKVL---CQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 120 MMRENISLVKIGLRGYACEYSYTEHAATVRLL----CLEGKLEAAIRLQRIMVQKGFLPD 175
+ L + R + E R+L C G+++ AI + +++KG
Sbjct: 203 LEEATHLLYSMFWR--ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 176 VFTHNHIVNGLCKVGLMEKAHDWLVR------EMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
++HI + G E + + + R E L G +P L +Y+ + +
Sbjct: 261 KRCYHHI-----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLV 315
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
+ + +M G +P V ALC G LKEA ++ + + +P + V
Sbjct: 316 EGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVL 375
Query: 290 MDHYFKNREFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
+ + + ++A +M +Q S + Y L++GLC++ A EML K
Sbjct: 376 IKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
P TY+++I L + EA L M +VP+ +K + +CF
Sbjct: 436 HFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 47/369 (12%)
Query: 199 LVREMLEFGPLP--NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
L R + + P P N + ++ +I+ Y + + +KAL LY M ++G++P + T ++ A
Sbjct: 53 LARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKA 112
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
C + K++ +N D+ T +D Y K E A +++EM +
Sbjct: 113 -CAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR---- 167
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLK-KGVLPDAFTYNILIGALWKEGKTREACYI 375
D+VA+N +I+G + + G +M + G+ P+ T + AL + G RE +
Sbjct: 168 DMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Query: 376 LGVMSKMGIVPD-------------------------------EISYKVMIRGLCFDRDI 404
G ++MG D E+++ MI G + I
Sbjct: 228 HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 405 VRAKELLWCML--NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
A E+ + ML +N+ + P+ LI+ R D+S +K G ++ N
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI-GAACNLRSHDFALQLRREMVQ 521
+I + K G++ A+ E+ K DV++YN LI G N R + + +L EM
Sbjct: 348 TIISFYAKYGSLCDAFRQFSEIGLK----DVISYNSLITGCVVNCRPEE-SFRLFHEMRT 402
Query: 522 KGHRPDLIS 530
G RPD+ +
Sbjct: 403 SGIRPDITT 411
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 194/430 (45%), Gaps = 51/430 (11%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G +E + I + G D ++N CKVGL+E A + + M E ++VT
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA-EMVFDRMFE----KDVVT 342
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+N +I GY V+ A+Y+ M ++ + VT L+ A +LK K++ +
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ D+V ++ MD Y K + A +++ +++E D++ +N L+ ++ L
Sbjct: 403 RHSFE-SDIVLASTVMDMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAYAESGLS 457
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A M +GV P+ T+N++I +L + G+ EA + M GI+P+ IS+ M
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 395 IRGL----CFDRDIVRAKE----------------LLWCM-LNNLMVPKPI----VWNL- 428
+ G+ C + I+ ++ L C L +L + + I + NL
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Query: 429 ----------IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
++D+Y +C D++ A + + ++ + NA+I A+ GN+ A
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSNAMISAYALYGNLKEAI 633
Query: 479 SLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-GHRPDLISYTELVRE 537
+L + GL PD +T ++ A + + A+++ ++V K +P L Y +V
Sbjct: 634 ALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDL 693
Query: 538 SCIRGNTKEA 547
G T++A
Sbjct: 694 LASAGETEKA 703
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 190/433 (43%), Gaps = 25/433 (5%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
+V+ G VF + + + K G+++ A ++ + P N V +N L+ GY
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDAS-----KVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
++A+ L+S M G++P RVT + + A G ++E K+ + + ++ D +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL-DNILG 312
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T ++ Y K A +++ M E DVV +N++I+G + L+ A Y C++++
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAI-YMCQLMR 367
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR---- 402
+ Y+ + A R LG + + +++ D
Sbjct: 368 L----EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 403 -DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY 461
IV AK++ ++ + I+WN ++ Y A+ M GV PNV T+
Sbjct: 424 GSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW 479
Query: 462 NALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQ 521
N +IL+ +++G + A + +M + G+ P+++++ ++ + A+ R+M +
Sbjct: 480 NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 522 KGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI-LFNMYCKLEEPV 580
G RP+ S T + + + I+++ + V ++ L +MY K +
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 581 KAFNLFQDWLESK 593
KA +F L S+
Sbjct: 600 KAEKVFGSKLYSE 612
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 156/336 (46%), Gaps = 34/336 (10%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
HN ++ G ME A R++ + P+ +LV++N LI GY + +KA+Y+Y
Sbjct: 193 VHNASIHMFASCGDMENA-----RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD--KDIPDLVTSTVFMDHYFK 295
M G++P+ VT LV + G L K+ E + + IP LV + MD + K
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP-LVNA--LMDMFSK 304
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ +A +++ + + + +V++ +I+G + L++++ +M +K D
Sbjct: 305 CGDIHEARRIFDNLEKRT----IVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVL 356
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
+N +IG + + ++A + M PDEI+ MI L + +W +
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT---MIHCLSACSQLGALDVGIW--I 411
Query: 416 NNLMVPKPIVWNL-----IIDLYGRCKDVSNAILTRDLMLKFGVHP-NVFTYNALILAHV 469
+ + + N+ ++D+Y +C ++S A L + G+ N TY A+I
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEA-----LSVFHGIQTRNSLTYTAIIGGLA 466
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
G+ A S EM+ G+ PD +T+ L+ A C+
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 154/373 (41%), Gaps = 56/373 (15%)
Query: 162 RLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKG 221
++Q M+ G + D F + ++ C + + D+ V+ +L+ PN+ ++N I+G
Sbjct: 71 QIQAQMIINGLILDPFASSRLI-AFCALS-ESRYLDYSVK-ILKGIENPNIFSWNVTIRG 127
Query: 222 YCTVNSVDKALYLYSSMADTGI---QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
+ + ++ LY M G +P+ T +L +C + L M+
Sbjct: 128 FSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLF-KVCADLRLSSLGHMI-------- 178
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
+ H K R +E+ +N I+ M A
Sbjct: 179 -----------LGHVLKLR----------------LELVSHVHNASIHMFASCGDMENAR 211
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
++ + + D ++N LI K G+ +A Y+ +M G+ PD+++ ++
Sbjct: 212 ----KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Query: 399 CFDRDIVRAKELL-WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
D+ R KE + N L + P+V N ++D++ +C D+ A D + K
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLV-NALMDMFSKCGDIHEARRIFDNLEK----RT 322
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
+ ++ +I + + G + + L ++M K DVV +N +IG + + AL L +
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 518 EMVQKGHRPDLIS 530
EM +PD I+
Sbjct: 379 EMQTSNTKPDEIT 391
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 9/280 (3%)
Query: 287 TVFMDHYFKNREFIQAFSLWNEMR----QNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
T+F + K+ F + F L EM ++ +E+D + Y+ +I + L N A +
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR--GLCF 400
M K G++PD TY+ ++ K GK E + G PD I++ V+ + G
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
D D +R +L M + + P +V+N +++ GR A + ML+ G+ PN T
Sbjct: 306 DYDGIRY--VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT 363
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
AL+ + K+ A L EEM K D + YN L+ ++ + A +L +M
Sbjct: 364 LTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Query: 521 QKGH-RPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ RPD SYT ++ G ++A E + ++LK+G+
Sbjct: 424 ESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 2/298 (0%)
Query: 297 REFIQAFSLWNEMRQNSM-EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
RE+ + + +N ++ S+ ++ + YNV + L + L A EM+K GV D T
Sbjct: 164 REWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNIT 223
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
Y+ +I + +A M K G++PDE++Y ++ + L +
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
P I ++++ ++G D M V PNV YN L+ A ++G
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
A SL EML GL P+ T L+ R ALQL EM K D I Y L+
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Query: 536 RESCIRGNTKEAEERYAKILKS-GLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
G +EAE + + +S D+ + N+Y + KA LF++ L++
Sbjct: 404 NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 3/292 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
MV+ G D T++ I+ + L KA +W R M + G +P+ VTY+ ++ Y
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER-MYKTGLMPDEVTYSAILDVYSKSG 270
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
V++ L LY TG +P+ + ++L E G + +L+E+ + D P++V
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK-PNVVVY 329
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
++ + + A SL+NEM + + + L+ K + A EM
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSK-MGIVPDEISYKVMIRGLCFDRDIV 405
K D YN L+ G EA + M + + PD SY M+
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAE 449
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
+A EL ML + + ++ G+ K + + + DL +K GV P+
Sbjct: 450 KAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 4/293 (1%)
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
EM++ G + +TY+T+I N +KA+ + M TG+ P+ VT + ++ ++G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
++E + E + PD + +V + + ++ + EM+ ++ +VV Y
Sbjct: 271 KVEEVLSLYERAVATGWK-PDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVY 329
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
N L+ + + LA EML+ G+ P+ T L+ K R+A + M
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP--IVWNLIIDLYGRCKDV 439
D I Y ++ +C D + E L+ + + +P + ++++YG
Sbjct: 390 KKWPMDFILYNTLL-NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKA 448
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
A+ + MLK GV NV L+ K+ I + + + +G+ PD
Sbjct: 449 EKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
++A + + GK+E + L V G+ PD + + + G + ++++EM
Sbjct: 259 YSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIR-YVLQEM 317
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
PN+V YNTL++ A L++ M + G+ PN T LV +
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 264 KEAKKMLEEILNDDKDIP-DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM-EVDVVAY 321
++A ++ EE+ K P D + ++ +A L+N+M+++ D +Y
Sbjct: 378 RDALQLWEEM--KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSY 435
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
++N A EMLK GV + L+ L K + + Y+ + K
Sbjct: 436 TAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Query: 382 MGIVPDE 388
G+ PD+
Sbjct: 496 RGVKPDD 502
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVR-EMLEFGPLPNLVTYNTLIKGYCTVNSVDKAL 232
P + ++ L K +E L E+ E P + + +I Y +++A+
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSGRIEEAI 128
Query: 233 YLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF--- 289
++ + + P+ T N L+ L +++ +++ EIL + + + F
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLEESTFGIL 185
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL--AYGYACEMLKK 347
+D + E A L M Q+S+ VD Y+ L++ +CK++ + GY ++ K
Sbjct: 186 IDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKT 245
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
P Y +++ L + G+ +E +L M + PD + Y ++++G+ D D +A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFTYNALI 465
+L +L + P +N+ I+ G CK D+ A+ M K G PNV TYN LI
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYIN--GLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
A VK+G++ RA +L +EM T G+ + T++++I A
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
PDV+T+N +NGLCK +E A ++ M + G PN+VTYN LIK + +A
Sbjct: 319 PDVYTYNVYINGLCKQNDIEGALK-MMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKT 377
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
L+ M G+ N T +I++ A E + A +LEE N
Sbjct: 378 LWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 157/369 (42%), Gaps = 25/369 (6%)
Query: 234 LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK-DIPDLVTSTVFMDH 292
L SS +P ++ L ++ L+ +L + +K D P+ + V +
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAY 118
Query: 293 YFKNR--EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC-----KNQLMNLAYGYACEML 345
F R E I+ F R V +N L K Q + L +
Sbjct: 119 GFSGRIEEAIEVFFKIPNFR-------CVPSAYTLNALLLVLVRKRQSLELVPEILVKAC 171
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD-- 403
+ GV + T+ ILI AL + G+ A ++ MS+ ++ D Y ++ +C +D
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS 231
Query: 404 ----IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
I ++L + + +V +++ GR K+V + + + M V P++
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVE-GGRGKEVVSVL---NQMKCDRVEPDLV 287
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
Y ++ + + +A L +E+L GL PDV TYN+ I C + AL++ M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEP 579
+ G P++++Y L++ G+ A+ + ++ +G+ + I+ + Y +++E
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Query: 580 VKAFNLFQD 588
V A L ++
Sbjct: 408 VCAHGLLEE 416
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK---------VGLME-------- 193
LC G+++ A L R M Q + D ++ +++ +CK +G +E
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248
Query: 194 ---KAHDWLVREMLEFGP----------------LPNLVTYNTLIKGYCTVNSVDKALYL 234
+ + ++R ++E G P+LV Y +++G KA L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ + G+ P+ T N+ ++ LC+ ++ A KM+ +N P++VT + +
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSS-MNKLGSEPNVVTYNILIKALV 367
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K + +A +LW EM N + + ++++I+ + + A+G E V +
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSS 427
Query: 355 TYNILIGALWKEGKTREACYILG 377
+I L ++G +A +L
Sbjct: 428 RIEEVISRLCEKGLMDQAVELLA 450
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 161/365 (44%), Gaps = 45/365 (12%)
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
+A + R + + PN+ N++ K + ++ + L LY + GI P+ + ++
Sbjct: 53 RAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVV 112
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ-- 311
+ + G L +A L E L KD V MD Y K+ A +++++ Q
Sbjct: 113 IKSAGRFGILFQA---LVEKLGFFKDP---YVRNVIMDMYVKHESVESARKVFDQISQRK 166
Query: 312 ----NSM---------------------EVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
N M E DVV++ V+I G K + + A Y M +
Sbjct: 167 GSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
K V+ ++N ++ + G T +A + M ++G+ P+E ++ ++I F D
Sbjct: 227 KSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
+ L+ + + V ++D++ +C+D+ +A R + + G N+ T+NA+I
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA---RRIFNELGTQRNLVTWNAMIS 339
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG-HR 525
+ + G++ A L + M + +VV++N LI + A++ +M+ G +
Sbjct: 340 GYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 526 PDLIS 530
PD ++
Sbjct: 396 PDEVT 400
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 58/416 (13%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G E A +L +M + DV + ++ G KV +E A R+ + P ++V+
Sbjct: 181 GNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENA-----RKYFDRMPEKSVVS 231
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+N ++ GY + AL L++ M G++PN T I++ A C + L +++
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA-CSFRADPSLTRSLVKLI 290
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
++ + + T +D + K R+ A ++NE+ + ++V +N +I+G + M
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDM 347
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG-IVPDEISYKV 393
+ A M K+ V+ ++N LI G+ A M G PDE++
Sbjct: 348 SSARQLFDTMPKRNVV----SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT--- 400
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFG 453
MI ++ G D+ D + K
Sbjct: 401 MIS--------------------------------VLSACGHMADLELGDCIVDYIRKNQ 428
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
+ N Y +LI + + GN++ A + +EM + DVV+YN L A L
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETL 484
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQIL 569
L +M +G PD ++YT ++ +C R + +R K +++ L + + + +L
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVL-TACNRAGLLKEGQRIFKSIRNPLADHYACMDLL 539
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 150 LLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPL 209
LL + K +RI + G ++ T N +++G ++G M A R++ + P
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA-----RQLFDTMPK 359
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG-IQPNRVTCNILVHALCENGHLKEAKK 268
N+V++N+LI GY A+ + M D G +P+ VT ++ L GH+ + +
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT---MISVLSACGHMADLEL 416
Query: 269 ---MLEEILNDDKDIPDL-VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
+++ I + + D S +FM Y + +A +++EM+ E DVV+YN L
Sbjct: 417 GDCIVDYIRKNQIKLNDSGYRSLIFM--YARGGNLWEAKRVFDEMK----ERDVVSYNTL 470
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
N +M +G+ PD TY ++ A + G +E I
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 161/391 (41%), Gaps = 41/391 (10%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
QKGF +N ++ L K+ + W + + ++ L + T+ + + Y V
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLI--WSLVDDMKAKKLLSKETFALISRRYARARKV 178
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
+A+ + M + G + N ++ L ++ ++ +A+K+ ++ + + PD+ + T+
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDK-MKKKRFEPDIKSYTI 237
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
++ + + ++ + EM+ E DVVAY ++IN CK + A + EM ++
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
P + LI L E K +A G + +Y ++ C
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYC--------- 348
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
W+ + + +A T D M GV PN TY+ ++
Sbjct: 349 -----------------WS---------QRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 382
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
++ AY + + M + P V TY +++ CN D A+++ EM KG P +
Sbjct: 383 IRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 439
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGL 559
++ L+ C EA E + ++L G+
Sbjct: 440 HMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 7/273 (2%)
Query: 110 MLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQ 169
+L+G + L ++R + V ++ E + + C K E AIR M Q
Sbjct: 238 LLEGWGQELNLLR--VDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQ 295
Query: 170 KGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVD 229
+ P ++NGL + A ++ R PL TYN L+ YC ++
Sbjct: 296 RNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPL-EAPTYNALVGAYCWSQRME 354
Query: 230 KALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVF 289
A M G+ PN T +I++H L KEA ++ + + + P + T +
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE----PTVSTYEIM 410
Query: 290 MDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGV 349
+ + A +W+EM+ + + ++ LI LC ++ A Y EML G+
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
P ++ L L EG+ + ++ M ++
Sbjct: 471 RPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 426 WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEML 485
+N ++D + ++V +A D M K P++ +Y L+ + N+ R + EM
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
+G PDVV Y ++I A C + ++ A++ EM Q+ +P + L+
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYC 574
+A E + + SG + L YC
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYC 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 4/283 (1%)
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K ++F +SL ++M+ + + + ++ + + + A G +M + G ++
Sbjct: 140 KIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESS 198
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
+N ++ L K +A + M K PD SY +++ G + +++R E+ M
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNI 474
+ P + + +II+ + + K AI + M + P+ + +LI +
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 475 YRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
A E + G + TYN L+GA C + + A + EM KG P+ +Y +
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
+ +KEA E Y + ++ + +I+ M+C E
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCEPTVSTY---EIMVRMFCNKE 418
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 31/259 (11%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN------LVTYNTL 218
R M ++GF I++ K G+ E A F +PN ++++N L
Sbjct: 104 RDMSKEGF------AARIISLYGKAGMFENAQKV-------FEEMPNRDCKRSVLSFNAL 150
Query: 219 IKGYCTVNSVDKALYLYSSM-ADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDD 277
+ Y D L++ + I+P+ V+ N L+ ALCE L EA +L+EI N
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 278 KDIPDLVT-STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC----KNQ 332
PD+VT +T+ + Y K +F +W +M + ++ +D+ YN + GL +
Sbjct: 211 LK-PDIVTFNTLLLSSYLKG-QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKE 268
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
L+NL +G E+ G+ PD F++N +I EGK EA + K G PD+ ++
Sbjct: 269 LVNL-FG---ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFA 324
Query: 393 VMIRGLCFDRDIVRAKELL 411
+++ +C D A EL
Sbjct: 325 LLLPAMCKAGDFESAIELF 343
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVV 319
G + A+K+ EE+ N D +++ + Y +++F L+NE+ S++ D+V
Sbjct: 123 GMFENAQKVFEEMPNRDCK-RSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 320 AYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVM 379
+YN LI LC+ + A E+ KG+ PD T+N L+ + + +G+ I M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 380 SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
+ + D +Y + GL + ++KEL ++L+G K
Sbjct: 242 VEKNVAIDIRTYNARLLGLANE---AKSKEL-------------------VNLFGELKAS 279
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
G+ P+VF++NA+I + G + A + +E++ G PD T+ LL
Sbjct: 280 -------------GLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ A C + A++L +E K + + +LV E ++G+ +E E KI K+
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE-LVKGSKREEAEEIVKIAKT-- 383
Query: 560 MNDHVPVQI 568
ND + +++
Sbjct: 384 -NDFLKLKL 391
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 38/215 (17%)
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
K+ I PD +SY +I+ LC + A LL + N
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK----------------------- 209
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL-L 499
G+ P++ T+N L+L+ G + +M+ K + D+ TYN L
Sbjct: 210 ------------GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARL 257
Query: 500 IGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+G A +S + + L E+ G +PD+ S+ ++R S G EAE Y +I+K G
Sbjct: 258 LGLANEAKSKEL-VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGY 316
Query: 560 MNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKR 594
D +L CK + A LF++ SKR
Sbjct: 317 RPDKATFALLLPAMCKAGDFESAIELFKETF-SKR 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 153 LEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNL 212
L+G+ E + MV+K D+ T+N + GL ++ + L E+ G P++
Sbjct: 227 LKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN-LFGELKASGLKPDV 285
Query: 213 VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
++N +I+G +D+A Y + G +P++ T +L+ A+C+ G + A ++ +E
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Query: 273 ILN 275
+
Sbjct: 346 TFS 348
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 52/329 (15%)
Query: 269 MLEEILND------DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
M++E++++ DKDI T T+ + Y K ++ + ++ +MR++ E+D AYN
Sbjct: 207 MVDELVSEMEKNGCDKDIR---TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYN 263
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWK----------------- 365
++I LC +LA + EM++KG+ TY +L+ + K
Sbjct: 264 IMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRI 323
Query: 366 ------------------EGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
GK +EA ++ + + D ++++++GLC +V A
Sbjct: 324 CEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDA 383
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILA 467
E++ M + V+ +II Y R DVS A+ +++ K G P V TY ++
Sbjct: 384 LEIVDIM-KRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQH 442
Query: 468 HVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPD 527
K + +L EM+ G+ PD V ++ A ++ M +KG +P
Sbjct: 443 LFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPT 502
Query: 528 LISYTELVRESCIRGNTKEAEERYAKILK 556
SY+ V+E C RY +I+K
Sbjct: 503 WKSYSIFVKELC-------RSSRYDEIIK 524
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 9/245 (3%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
+E A R R M++ GF+PD + LC+VG + A L + L P V Y+
Sbjct: 766 VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCL--DSLGKIGFPVTVAYS 823
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
I+ C + +++AL +S ++ T +VH L + G L++A L+++ N
Sbjct: 824 IYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA---LDKV-NS 879
Query: 277 DKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
K+I P + T + ++FK ++ + +M S E VV Y +I G
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ A+ M ++G PD TY+ I L + K+ +A +L M GI P I+++
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 394 MIRGL 398
+ GL
Sbjct: 1000 VFYGL 1004
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 134/336 (39%), Gaps = 41/336 (12%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L EM G L T+ +I Y + A+ + M D G+ P+ T L+ LC
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 259 ENG--HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
E +++EA + E++ +PD RE +Q +
Sbjct: 760 EKKGRNVEEATRTFREMIRSGF-VPD--------------RELVQDY------------- 791
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYAC-EMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
+ LC ++ N +C + L K P Y+I I AL + GK EA
Sbjct: 792 --------LGCLC--EVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSE 841
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
L + D+ +Y ++ GL D+ +A + + M P V+ +I + +
Sbjct: 842 LASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFK 901
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
K + + T M P+V TY A+I ++ G + A++ M +G PD T
Sbjct: 902 EKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKT 961
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
Y+ I C + AL+L EM+ KG P I++
Sbjct: 962 YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC--EMLKKGVLPDAFTYNIL 359
A + EM+ + + LI LC+ + N+ EM++ G +PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
+G L + G T++A L + K+G P ++Y + IR LC + A L
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+ + I+ + D+ A+ + M + G P V Y +LI+ K + +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
++M + P VVTY +I +L + A R M ++G PD +Y++ + C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 540 IRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
+++A + +++L G+ + + +F
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 171/427 (40%), Gaps = 56/427 (13%)
Query: 166 IMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV 225
++ + G P V T+ I+ L K+ EK + L EM+E G P+ V ++ G+
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN-LFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
N V +A ++SSM + GI+P + +I V LC + E K+ ++ I D +
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK---NQLMNLAYGYAC 342
S V + KN E + L E+++ S +Y +NG K +Q L Y C
Sbjct: 542 SWV-ISSMEKNGE-KEKIHLIKEIQKRSN-----SYCDELNGSGKAEFSQEEELVDDYNC 594
Query: 343 -EMLKKGVLPDAFTY----------NILIGAL-WKEGKTREAC----------------- 373
+++++ LP A + +L + W+ +T+EA
Sbjct: 595 PQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWE--RTQEALEKSTVQFTPELVVEVLR 652
Query: 374 -----------YILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
+ V + G + +Y + I+ +D + + L + M +
Sbjct: 653 HAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLIT 712
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI--LAHVKSGNIYRAYSL 480
W ++I YGR + AI T M G+ P+ T+ LI L K N+ A
Sbjct: 713 QDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRT 772
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
EM+ G PD +G C + + A + + G P ++Y+ +R C
Sbjct: 773 FREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCR 831
Query: 541 RGNTKEA 547
G +EA
Sbjct: 832 IGKLEEA 838
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 45/260 (17%)
Query: 137 CEYSYTEHAATVRLL---CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
CE S EH A LL C+ GK++ A+ L R + K D +V GLC+ M
Sbjct: 324 CEIS--EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 381
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
A + + ++++ L + Y +I GY N V KAL + + +G +P RV+
Sbjct: 382 DALE--IVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG-RPPRVS---- 434
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
T T M H FK ++F + +L+NEM +N
Sbjct: 435 -------------------------------TYTEIMQHLFKLKQFEKGCNLFNEMIENG 463
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+E D VA ++ G + A+ M +KG+ P +Y+I + L + + E
Sbjct: 464 IEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEII 523
Query: 374 YILGVM--SKMGIVPDEISY 391
I M SK+ I D S+
Sbjct: 524 KIFNQMHASKIVIRDDIFSW 543
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 93/242 (38%), Gaps = 40/242 (16%)
Query: 127 LVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL 186
L +G G+ +Y+ + +R LC GKLE A+ + L D +T+ IV+GL
Sbjct: 808 LDSLGKIGFPVTVAYSIY---IRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 187 CKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPN 246
+ G ++KA D V M E G P + Y +LI + ++K L M +P+
Sbjct: 865 LQRGDLQKALD-KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPS 923
Query: 247 RVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLW 306
VT ++ G ++EA ++ +
Sbjct: 924 VVTYTAMICGYMSLGKVEEA------------------------------------WNAF 947
Query: 307 NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKE 366
M + D Y+ IN LC+ A EML KG+ P + + L +E
Sbjct: 948 RNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Query: 367 GK 368
GK
Sbjct: 1008 GK 1009
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 425 VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
W ++I +YG+ K + +L + M K G + YN +I + +G A +EM
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 485 LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
+ KG+ + TY +L+ D + +MV+ + ++ L++ C+ G
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKI 345
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNL 585
KEA E ++ + D +IL C+ V A +
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 1/272 (0%)
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
YN +++ + + +++ EM K G D T+ ILI K K + + M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
K G D +Y +MIR LC A E M+ + + +++D + + V
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
D M++ + L+ + SG I A L E+ K + D + +L+
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 501 GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
C AL++ +++++ D Y ++ + + +A E++ I KSG
Sbjct: 372 KGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 561 NDHVPVQILFNMYCKLEEPVKAFNLFQDWLES 592
+ KL++ K NLF + +E+
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 3/328 (0%)
Query: 148 VRLLCLEGKL---EAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
V+L+ + GK E A L + M+ +G + + + +V+ + G + A L R
Sbjct: 154 VKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKS 213
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
P++ TY+ LIK + V + DK L S M GI+PN +T N L+ A +
Sbjct: 214 SHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
E + L ++L +D PD T + + N + + + + + + +E ++ +N+L
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
++ K+ M K TYN++I A + G ++ Y+ +M I
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAIL 444
P ++ ++R + +L + N+ + + +N ++D YGR + +
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 445 TRDLMLKFGVHPNVFTYNALILAHVKSG 472
+LM K G P+ TY ++ A+ SG
Sbjct: 454 VLELMEKKGFKPDKITYRTMVKAYRISG 481
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 7/354 (1%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L+RE L + P N+ Y LI +KA L+ M + G N LV A
Sbjct: 139 LLREQLWYKP--NVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYS 196
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+G A +LE + + PD+ T ++ + + + F + L ++MR+ + +
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNT 256
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEML-KKGVLPDAFTYNILIGALWKEGKTR--EACYI 375
+ YN LI+ K ++ +ML + PD++T N + A G+ E CY
Sbjct: 257 ITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY- 315
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
GI P+ ++ +++ + + ++ M + +N++ID +GR
Sbjct: 316 -EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
D+ LM + P+ T +L+ A+ ++ + + + + D+V
Sbjct: 375 AGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEE 549
+N L+ A + + M +KG +PD I+Y +V+ I G T +E
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKE 488
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDW-LVREMLEFGP-LPNLVTYNTLIKGYCTVN 226
Q+G++ V ++ +++ L K+ + A W L+ EM +F P L N T +I+ YC V+
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTA--WTLIDEMRKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALC------ENGHL----------------- 263
V KA+ + + ++ L+ ALC + GHL
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNI 271
Query: 264 ------------KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
+EA+++ E+ N D+V+ + + Y K + L++ M++
Sbjct: 272 VLNGWCNVIGSPREAERVWMEMGNVGVK-HDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK-KGVLPDAFTYNILIGALWKEGKTR 370
+E D YN +++ L K ++ A M + KG+ P+ TYN LI L K KT
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
EA + M + G+ P +Y +R L ++ ELL M P + ++I
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVF---ELLAKMRKMGCEPTVETYIMLI 447
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
R +D N +L D M + V P++ +Y +I +G I AY +EM KG+
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Query: 491 PD 492
P+
Sbjct: 508 PN 509
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G L ++L M ++ PD +N +V+ L K + +A + + E G PN+VT
Sbjct: 316 GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVT 375
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN+LIK C ++A ++ M + G+ P T + + L + E + ++
Sbjct: 376 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMG 435
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ P + T + + + R+F LW+EM++ ++ D+ +Y V+I+GL N +
Sbjct: 436 CE----PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKI 491
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
AYGY EM KG+ P+ +++ W GK
Sbjct: 492 EEAYGYYKEMKDKGMRPNENVEDMIQS--WFSGK 523
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 281 PDLVTST---VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA 337
P LV S + + Y + +A + ++ ++ +E+ + + L++ LC+ + ++ A
Sbjct: 192 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 251
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKE--GKTREACYILGVMSKMGIVPDEISYKVMI 395
G+ K DA ++NI++ W G REA + M +G+ D +SY MI
Sbjct: 252 -GHLIFCNKDKYPFDAKSFNIVLNG-WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI 309
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGV 454
+ + +L M + P V+N ++ + VS A L + + + G+
Sbjct: 310 SCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGI 369
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PNV TYN+LI K+ A + +EML KGLFP + TY+ + LR+ + +
Sbjct: 370 EPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFE 426
Query: 515 LRREMVQKGHRPDLISYTELVRESC 539
L +M + G P + +Y L+R+ C
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLC 451
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA---HDWLVREMLEFGPLPN 211
G A R+ M G DV +++ +++ K G + K D + +E +E P+
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE----PD 336
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMAD-TGIQPNRVTCNILVHALCENGHLKEAKKML 270
YN ++ + V +A L +M + GI+PN VT N L+ LC+ +EAK++
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+E+L + P + T FM + E + F L +MR+ E V Y +LI LC+
Sbjct: 397 DEML-EKGLFPTIRTYHAFM-RILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
+ + EM +K V PD +Y ++I L+ GK EA M G+ P+E
Sbjct: 453 WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP---IVWNLIIDLYGRCKDVSNAILTRD 447
++ ++ LC +++ A L++C + IV N ++ G ++ +
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME-- 292
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLR 507
M GV +V +Y+++I + K G++ + L + M + + PD YN ++ A
Sbjct: 293 -MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 508 SHDFALQLRREMVQ-KGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLM 560
A L + M + KG P++++Y L++ C T+EA++ + ++L+ GL
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 182/406 (44%), Gaps = 24/406 (5%)
Query: 155 GKLEAAIR---LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
GK++A R +Q ++++G +VF N++++ L+ AH + EM E N
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHK-VFDEMSE----RN 70
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ-PNRVTCNILVHALCENGHLKEAKKML 270
+VT+ T++ GY + +KA+ LY M D+ + N + ++ A G ++ +
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E I ++ D+V +D Y KN I+A S + E+ + S ++N LI+G CK
Sbjct: 131 ERIGKENLR-GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS----TSWNTLISGYCK 185
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
LM+ A + + P+ ++N LI +G R A L M + G+V D +
Sbjct: 186 AGLMD----EAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFA 240
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM- 449
++ F + K+L C++ + + P + +ID+Y C + I D+
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL---IYAADVFH 297
Query: 450 -LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
K V+ +V +N+++ + + A L ++ L D T + + N +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
LQ+ +V G+ D I + LV GN ++A + + ++
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 154/331 (46%), Gaps = 11/331 (3%)
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++ TY++ IK + +V KAL +Y S+ D + N CN ++ L +NG L K+
Sbjct: 131 SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNRE-FIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+++ D PD+VT + K + + +A L E+ N +++D V Y ++
Sbjct: 190 DQMKRDGLK-PDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICA 248
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
N A + +M +G P+ + Y+ L+ + +G ++A ++ M +G+VP+++
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 390 S----YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
KV I+G FD R++ELL + + + + +++D + + A
Sbjct: 309 MMTTLLKVYIKGGLFD----RSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
D M GV + + + +I A +S A L + T D+V N ++ A C
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVR 536
+ +++ ++M ++ PD ++ L++
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 148/355 (41%), Gaps = 44/355 (12%)
Query: 175 DVFTHNHIVNGLCKVGLME---KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTV-NSVDK 230
+V+ N I++ L K G ++ K D + R+ L+ P++VTYNTL+ G V N K
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK----PDVVTYNTLLAGCIKVKNGYPK 220
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
A+ L + GIQ + V ++ NG +EA+ +++ + + P++ + +
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ-MKVEGHSPNIYHYSSLL 279
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ Y ++ +A L EM+ + + V L+ K L + + E+ G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
+ Y +L+ L K GK EA I M G+ D + +MI LC + AKEL
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+D DL++ N ++ A+ +
Sbjct: 400 -------------------------SRDSETTYEKCDLVM----------LNTMLCAYCR 424
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
+G + + ++M + + PD T+++LI + H A Q +M KGHR
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHR 479
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 150 LLCL--EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
L CL GKL++ I+L M + G PDV T+N ++ G KV L+ E+ G
Sbjct: 173 LSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNG 232
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+ V Y T++ + ++A M G PN + L+++ G K+A
Sbjct: 233 IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+++ E + +P+ V T + Y K F ++ L +E+ + + Y +L++G
Sbjct: 293 ELMTE-MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDG 351
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
L K + A +M KGV D + +I+I AL + + +EA
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIY-RAYSLKEEMLTKGLFPDVVTYNLLIG-AAC 504
D M + G+ P+V TYN L+ +K N Y +A L E+ G+ D V Y ++ A
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249
Query: 505 NLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
N RS + A ++M +GH P++ Y+ L+ +G+ K+A+E ++ GL+ + V
Sbjct: 250 NGRSEE-AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 565 PVQILFNMYCK 575
+ L +Y K
Sbjct: 309 MMTTLLKVYIK 319
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 120/297 (40%), Gaps = 19/297 (6%)
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEI--LNDDKDIPDLVTSTVFMDHYFKNREF 299
G N +TC + L + K L ++ + K++ + T M +
Sbjct: 122 GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFV 181
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL--PDAFTYN 357
+A + + M++ + DV AYN +IN LC+ A +M G PD +TY
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 358 ILIGALWKEG-----------KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
ILI + + G + EA + M G VPD ++Y +I G C I R
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH-PNVFTYNALI 465
A EL M VP + +N I Y ++ AI M K G P TY LI
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
A V++ A L EM+ GL P TY L+ A L S A L E+ ++
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA---LSSEGLASTLDEELHKR 415
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 26/278 (9%)
Query: 177 FTHNHIVNGLCK--VGLMEKAHDW-----LVREMLEFGPLPNLVTYNT---LIKGYCTVN 226
F HN I C+ L+ K +D+ +R++ N+VT + L+K
Sbjct: 123 FDHNEIT---CRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEG 179
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEI-LNDDKDIPDLVT 285
V +AL + M + +P+ N +++ALC G+ K+A+ +L+++ L + PD T
Sbjct: 180 FVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYT 239
Query: 286 STVFMDHYFK-----------NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
T+ + Y + R +A ++ EM DVV YN LI+G CK +
Sbjct: 240 YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRI 299
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG-IVPDEISYKV 393
A +M KG +P+ TYN I + A ++ M K+G VP +Y
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTP 359
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
+I L R A++L+ M+ +VP+ + L+ D
Sbjct: 360 LIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCD 397
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 48/286 (16%)
Query: 94 SGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCL 153
S E G++ V A L L ++E ++ ++ Y C+ + + LC
Sbjct: 154 SRRENGKNVVTTASITCLMKCLGEEGFVKEALATF-YRMKEYHCKPDVYAYNTIINALCR 212
Query: 154 EGKLEAAIRLQRIMVQKGFL--PDVFTHNHIVNGLCKVGLME------KAHDW----LVR 201
G + A L M GF PD +T+ +++ C+ G+ + W + R
Sbjct: 213 VGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFR 272
Query: 202 EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG 261
EML G +P++VTYN LI G C N + +AL L+ M G PN+VT N +
Sbjct: 273 EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTN 332
Query: 262 HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAY 321
++ A +M+ + +P T Y
Sbjct: 333 EIEGAIEMMRTMKKLGHGVPGSST-----------------------------------Y 357
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG 367
LI+ L + + A EM++ G++P +TY ++ AL EG
Sbjct: 358 TPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 107/282 (37%), Gaps = 20/282 (7%)
Query: 305 LWNEMRQNSME------VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
LW+ +RQ S V + L+ L + + A M + PD + YN
Sbjct: 146 LWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNT 205
Query: 359 LIGALWKEGKTREACYILGVMSKMGI--VPDEISYKVMIRGLC-----------FDRDIV 405
+I AL + G ++A ++L M G PD +Y ++I C R +
Sbjct: 206 IINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMW 265
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
A + ML VP + +N +ID + + A+ + M G PN TYN+ I
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGL-FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
+ + I A + M G P TY LI A R A L EMV+ G
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPV 566
P +Y + G +E K ++ G+ + V
Sbjct: 386 VPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRV 427
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF--PDVVTY 496
V A+ T M ++ P+V+ YN +I A + GN +A L ++M G PD TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 497 NLLIGAACNL-----------RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTK 545
+LI + C R A ++ REM+ +G PD+++Y L+ C
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 546 EAEERYAKILKSGLMNDHVPVQILFNMYCK 575
A E + + G VP Q+ +N + +
Sbjct: 301 RALELFEDMKTKGC----VPNQVTYNSFIR 326
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 5/284 (1%)
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
N L+ LC+ + +A+ + + + + PDL T + + + + +A + + EM+
Sbjct: 184 NALLRTLCQEKSMTDARNVYHSLKHQFQ--PDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
++ DVV YN LI+ CK++ + AY +M ++ PD TY +IG L G+
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+A +L M + G PD +Y IR C R + A +L+ M+ + P +NL
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
+ D+ + ML PN + LI + + A L E+M+ KG
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 418
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
+ ++L+ C+L + A + EMV+KGHRP +S+ +
Sbjct: 419 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 45/360 (12%)
Query: 232 LYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMD 291
Y Y+S A G + + + +++ L N + ++L E D+ + T V +
Sbjct: 94 FYRYAS-AIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLG 152
Query: 292 HYFK---NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
K R+ +++F W R D +N L+ LC+ + M A LK
Sbjct: 153 RVAKLCSVRQTVESF--WKFKRLVPDFFDTACFNALLRTLCQEKSMTDARN-VYHSLKHQ 209
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
PD T+NIL+ WK + A M G+ PD ++Y
Sbjct: 210 FQPDLQTFNILLSG-WKSSEE--AEAFFEEMKGKGLKPDVVTY----------------- 249
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
N +ID+Y + +++ A D M + P+V TY +I
Sbjct: 250 ------------------NSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL 291
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
G +A + +EM G +PDV YN I C R A +L EMV+KG P+
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+Y R + + + E Y ++L + + + L M+ + E+ A L++D
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWED 411
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 17/301 (5%)
Query: 278 KDIPDLVTSTVFMDH--YFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
KD+ D V V H + EF + S +S +D + Y L +N+ +
Sbjct: 71 KDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI-----LGRNRKFD 125
Query: 336 LAYGYACEMLKKG-VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS---Y 391
+ E +K L T +++G + K R+ ++ VPD +
Sbjct: 126 QIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRL--VPDFFDTACF 183
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK 451
++R LC ++ + A+ + + L + P +N+++ + K A + M
Sbjct: 184 NALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKG 239
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF 511
G+ P+V TYN+LI + K I +AY L ++M + PDV+TY +IG + D
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 512 ALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
A ++ +EM + G PD+ +Y +R CI +A++ +++K GL + + F
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 572 M 572
+
Sbjct: 360 V 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
++G + + + + + C + ++E A +L M ++ PDV T+ ++ GL +G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+KA + +++EM E+G P++ YN I+ +C + A L M G+ PN T N
Sbjct: 297 PDKARE-VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQ-AFSLWNEM 309
+ L L + ++ +L ++ +P+ S +F+ FK E + A LW +M
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNEC-LPN-TQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 41/218 (18%)
Query: 146 ATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLE 205
A +R LC E + A + + + F PD+ T N +++G E EM
Sbjct: 185 ALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAF----FEEMKG 239
Query: 206 FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
G P++VTYN+LI YC ++KA L M + P+ +T ++ L G +
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
A+++L+ EM++ DV AYN I
Sbjct: 300 AREVLK------------------------------------EMKEYGCYPDVAAYNAAI 323
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
C + + A EM+KKG+ P+A TYN+ L
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 35/332 (10%)
Query: 100 QHAVFNALDNMLKGSLERLKMMRENISLVKI-GLRGYACEYSYTEHAATVRLLCLEGKLE 158
++A + +D + G ER K + LV GL + C Y + E A T L C
Sbjct: 187 RYAAAHKVDEAV-GVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAET--LFCSR---- 239
Query: 159 AAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTL 218
++ F D+ N I+NG C +G + +A + ++++ P++V+Y T+
Sbjct: 240 ----------RREFGCDIKAMNMILNGWCVLGNVHEAKRFW-KDIIASKCRPDVVSYGTM 288
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
I + KA+ LY +M DT P+ CN ++ ALC + EA ++ EI
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 348
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEM--RQNSMEVDVVAYNVLINGLCKNQLMNL 336
D P++VT + H K R + + L EM + S + V ++ L+ +++ +++
Sbjct: 349 D-PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI 407
Query: 337 AYGY----ACEMLKKGVLPDAFTYNILIGALW-KEGKTREACYILGVMSKMGIVPDEISY 391
CEM D + + W KE K RE I M + G+ PD+ +Y
Sbjct: 408 VLERMAKNKCEMTS-----DLYNLMFRLYVQWDKEEKVRE---IWSEMERSGLGPDQRTY 459
Query: 392 KVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ I GL I A M++ MVP+P
Sbjct: 460 TIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 159/379 (41%), Gaps = 24/379 (6%)
Query: 159 AAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTL 218
A I Q ++ Q L +N I++ L K+ E+ H + EM + N TY L
Sbjct: 126 AYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQ-VFDEMSKRDGFVNEKTYEVL 184
Query: 219 IKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML----EEIL 274
+ Y + VD+A+ ++ + GI + V + L+ LC H++ A+ + E
Sbjct: 185 LNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFG 244
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
D K + ++ + + + + F W ++ + DVV+Y +IN L K +
Sbjct: 245 CDIKAMNMILNGWCVLGNVHEAKRF------WKDIIASKCRPDVVSYGTMINALTKKGKL 298
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
A M PD N +I AL + + EA + +S+ G P+ ++Y +
Sbjct: 299 GKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSL 358
Query: 395 IRGLCFDRDIVRAKELLWCMLNNLMV------PKPIVWNLIIDLYGRCKDVSNAILTRDL 448
++ LC +R E +W ++ + + P + ++ ++ R KDV + +L R
Sbjct: 359 LKHLC----KIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV-DIVLER-- 411
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
M K YN + +V+ + + EM GL PD TY + I
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 509 HDFALQLRREMVQKGHRPD 527
AL +EM+ KG P+
Sbjct: 472 IGEALSYFQEMMSKGMVPE 490
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 7/225 (3%)
Query: 137 CEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
C + + L +GKL A+ L R M PDV N++++ LC + +A
Sbjct: 278 CRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEAL 337
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG--IQPNRVTCNILV 254
+ + RE+ E GP PN+VTYN+L+K C + +K L M G PN VT + L
Sbjct: 338 E-VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYL- 395
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
L + K+ +LE + + ++ + + +F + ++E + +W+EM ++ +
Sbjct: 396 --LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKE-EKVREIWSEMERSGL 452
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
D Y + I+GL + A Y EM+ KG++P+ T +L
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
YN +++ L K + + EM K+ + TY +L+ K EA +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
+ GI D +++ ++ LC + + A E L+C N+I++ + +V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
A ++ P+V +Y +I A K G + +A L M PDV N +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 501 GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
A C + AL++ RE+ +KG P++++Y L++ C
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC 363
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 25/229 (10%)
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI--GA 362
++ MR+++M++D YN++I+GLCK + A +L G+ PD TYN++I +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
L + K + M + G+VPD I+Y MI GLC + +A++ V K
Sbjct: 61 LGRAEK------LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK----------VSK 104
Query: 423 PI-VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+N +I+ Y + V + + M + G+ NV TY LI + G+ A +
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 482 EEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
+EM++ G++ +T+ ++ C+ + +LR+ + + ++S
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRK------ELRKAVAMLLQKSSMVS 207
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
++M + D +N I++GLCK G ++A + +L G P++ TYN +I+
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFT-NLLISGLQPDVQTYNMMIR---- 57
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
+S+ +A LY+ M G+ P+ +T N ++H LC+ L +A+K+ +
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS------------ 105
Query: 285 TSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
+N LING CK + CEM
Sbjct: 106 ---------------------------------CSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
++G++ + TY LI + G A I M G+ I+++ ++ LC +++
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
Query: 405 VRAKELL 411
+A +L
Sbjct: 193 RKAVAML 199
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
D YNI+I L K GK EA I + G+ PD +Y +MIR + RA++L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLY 68
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M+ +VP I +N +I +G CK L V + T+N LI + K+
Sbjct: 69 AEMIRRGLVPDTITYNSMI--HGLCKQ-------NKLAQARKVSKSCSTFNTLINGYCKA 119
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
+ +L EM +G+ +V+TY LI + + AL + +EMV G I++
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 532 TELVRESCIRGNTKEAEERYAKIL-KSGLMNDHVPV 566
+++ + C R KE + A +L KS +++++V +
Sbjct: 180 RDILPQLCSR---KELRKAVAMLLQKSSMVSNNVTL 212
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
L A +L M+++G +PD T+N +++GLCK + +A + T+N
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS----------KSCSTFN 110
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
TLI GYC V + L+ M GI N +T L+H + G A + +E++++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC GK + A + ++ G PDV T+N ++ +G EK L EM+ G +P
Sbjct: 24 LCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEK----LYAEMIRRGLVP 78
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
+ +TYN++I G C N + +A + S + T N L++ C+ +K+ +
Sbjct: 79 DTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKATRVKDGMNLF 129
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
E+ + +++T T + + + +F A ++ EM N + + + ++ LC
Sbjct: 130 CEMYRRGI-VANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 331 NQ 332
+
Sbjct: 189 RK 190
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 38/187 (20%)
Query: 426 WNLIIDLYGRCK----DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
+N+II +G CK D + I T +L G+ P+V TYN +I + ++ RA L
Sbjct: 17 YNIII--HGLCKAGKFDEAGNIFTN--LLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 482 EEMLTKGLFPDVVTYN--------------------------LLIGAACNLRSHDFALQL 515
EM+ +GL PD +TYN LI C + L
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCK 575
EM ++G ++I+YT L+ G+ A + + +++ +G+ + + + + C
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 576 LEEPVKA 582
+E KA
Sbjct: 189 RKELRKA 195
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 141/339 (41%), Gaps = 2/339 (0%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
+E A + R++ + G D + +++ K G ++ + + +M G NL T+
Sbjct: 483 IEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE-VFHQMSNSGVEANLHTFG 541
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
LI G V KA Y + ++P+RV N L+ A ++G + A +L E+ +
Sbjct: 542 ALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAE 601
Query: 277 DKDI-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
I PD ++ M + +A ++ + + + Y + +N K+ +
Sbjct: 602 THPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWD 661
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A +M +K V PD ++ LI EA IL GI ISY ++
Sbjct: 662 FACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM 721
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
C +D +A EL + + + P N +I + A+ D + G+
Sbjct: 722 GACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLK 781
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
PN TY+ L+LA + + ++ L + G+ P+++
Sbjct: 782 PNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 143/332 (43%), Gaps = 7/332 (2%)
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
+ P T N+L+ ++C + E + + ++ + D T + K+ +
Sbjct: 463 LNPTMSTFNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAM 521
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
F ++++M + +E ++ + LI+G + + A+G + K V PD +N LI A
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 363 LWKEGKTREACYILGVMS--KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ G A +L M I PD IS +++ C + RAKE+ + +
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
P V+ + ++ + D A M + V P+ ++ALI + + A+ +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
++ ++G+ ++Y+ L+GA CN + AL+L ++ RP + + L+ C
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 541 RGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
+A E +I GL P I ++M
Sbjct: 762 GNQLPKAMEYLDEIKTLGLK----PNTITYSM 789
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 162/390 (41%), Gaps = 43/390 (11%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
+ ++ ++ G + G ++A ++F + V N L+ GY ++A+ +
Sbjct: 143 NAVSYATMITGFVRAGRFDEAEFLYAETPVKF---RDSVASNVLLSGYLRAGKWNEAVRV 199
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
+ MA + V+C+ +VH C+ G + +A+ + + + + ++T T +D YF
Sbjct: 200 FQGMAVKEV----VSCSSMVHGYCKMGRIVDARSLFDRMTERN-----VITWTAMIDGYF 250
Query: 295 KNREFIQAFSLWNEMRQ--------NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
K F F L+ MRQ N++ V A + +Q+ L E
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF-- 308
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
D F N L+ K G EA + GVM D +S+ +I GL + I
Sbjct: 309 -----DLFLGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLITGLVQRKQISE 359
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP--NVFTYNAL 464
A EL M MV W +I + ++S + FG+ P + T+ A+
Sbjct: 360 AYELFEKMPGKDMVS----WTDMIKGFSGKGEISKCVEL------FGMMPEKDNITWTAM 409
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I A V +G A +ML K + P+ T++ ++ A +L LQ+ +V+
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKI 554
DL LV C GNT +A + ++ I
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 159/393 (40%), Gaps = 46/393 (11%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
GK A+R+ + M K +V + + +V+G CK+G + A L M E N++T
Sbjct: 191 GKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARS-LFDRMTE----RNVIT 241
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTG-IQPNRVTCNILVHALCENGHLKEAKKMLEEI 273
+ +I GY + L+ M G ++ N T ++ A + +E ++ +
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 274 LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+ DL M Y K +A +++ M+ D V++N LI GL + +
Sbjct: 302 SRMPLEF-DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQ 356
Query: 334 MNLAYGYACEMLKK-------------------------GVLP--DAFTYNILIGALWKE 366
++ AY +M K G++P D T+ +I A
Sbjct: 357 ISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 367 GKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW 426
G EA M + + P+ ++ ++ D++ ++ ++ +V V
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ 476
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLT 486
N ++ +Y +C + ++A + PN+ +YN +I + +G +A L + +
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 487 KGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
G P+ VT+ L+ A ++ D + + M
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGL 191
L+ C SYT + L +E +++ +V+ + D+ N +V+ CK G
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEG-LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 192 MEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
A+ ++ PN+V+YNT+I GY KAL L+S + +G +PN VT
Sbjct: 489 TNDAY-----KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 252 ILVHALCENGHL 263
L+ A G++
Sbjct: 544 ALLSACVHVGYV 555
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 55/429 (12%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
I++ ++V+ G+ D+F N +V+ + G ++ A + EM E N+V++ ++I
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARK-VFDEMSE----RNVVSWTSMI 207
Query: 220 KGYCTVNSVDKALYLYSSMA-DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
GY + A+ L+ M D + PN VT ++ A + L+ +K+ I N
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
++ DL+ S + +D Y K A L++E ++++ L N + N +
Sbjct: 268 EVNDLMVSAL-VDMYMKCNAIDVAKRLFDEYGASNLD--------LCNAMASNYV----- 313
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
++G TREA + +M G+ PD IS I
Sbjct: 314 --------------------------RQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
R+I+ K +L N + N +ID+Y +C A D M + V
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM----SNKTV 403
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
T+N+++ +V++G + A+ E M K ++V++N +I + A+++
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 519 M-VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
M Q+G D ++ + G A+ Y I K+G+ D L +M+ +
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 578 EPVKAFNLF 586
+P A ++F
Sbjct: 520 DPESAMSIF 528
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 150/352 (42%), Gaps = 45/352 (12%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
+V+ L + + A D R E+G NL N + Y +AL +++ M D+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 242 GIQPNRVTC-----------NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
G++P+R++ NIL C L+ + + I N +
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN------------ALI 379
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
D Y K AF +++ M + VV +N ++ G +N ++ A+ M +K ++
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKT----VVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVM-SKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
++N +I L + EA + M S+ G+ D ++ + + AK
Sbjct: 436 ----SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+ + + N + + ++D++ RC D +A+ + + + +V + A I A
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL----TNRDVSAWTAAIGAMA 547
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA--ACNLRSHDFALQLRREM 519
+GN RA L ++M+ +GL PD V + +GA AC SH +Q +E+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAF---VGALTAC---SHGGLVQQGKEI 593
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L REM + G + N VTY TLI+G D A ++ M G+ P+ +T NIL+ LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+NG L++A LV V + L+ + ++ +V
Sbjct: 63 KNGKLEKA----------------LVAGKV-----------EDGWDLFCSLSLKGVKPNV 95
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEG---------KT 369
V Y +I+G CK AY +M + G LPD+ TYN LI A ++G K
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 370 REACYILGVMSKMGIVPD 387
+C G S G+V D
Sbjct: 156 MRSCRFAGDASTYGLVTD 173
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 161 IRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIK 220
+ L R M Q+G + + T+ ++ GL + G + A + + +EM+ G P+++TYN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE-IFKEMVSDGVPPDIMTYNILLD 59
Query: 221 GYCTVNSVDKALY---------LYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
G C ++KAL L+ S++ G++PN VT ++ C+ G +EA +
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
+ + +D +PD T + + ++ + + L EMR D Y ++ + L
Sbjct: 120 K-MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Query: 332 QL 333
+L
Sbjct: 179 RL 180
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLA-- 337
+ + VT T + F+ + A ++ EM + + D++ YN+L++GLCKN + A
Sbjct: 13 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALV 72
Query: 338 -------YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ C + KGV P+ TY +I K+G EA + M + G +PD +
Sbjct: 73 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGT 132
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
Y +IR D D + EL+ M + + L+ D+
Sbjct: 133 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 174
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA-------H 196
+ ++ L G + A + + MV G PD+ T+N +++GLCK G +EKA
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVED 78
Query: 197 DWLVREMLEF-GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
W + L G PN+VTY T+I G+C ++A L+ M + G P+ T N L+
Sbjct: 79 GWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Query: 256 ALCENGHLKEAKKMLEEI 273
A +G + ++++E+
Sbjct: 139 AHLRDGDKAASAELIKEM 156
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 44/204 (21%)
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
L+ EM Q + + V Y LI GL + ++A EM+ GV PD TYNIL+ L
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 365 KEGKTREACYILGV---------MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
K GK +A V +S G+ P+ ++Y MI G C KE + +
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKK----GFKEEAYTLF 118
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
+ P+ P+ TYN LI AH++ G+
Sbjct: 119 RKMKEDGPL-------------------------------PDSGTYNTLIRAHLRDGDKA 147
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLL 499
+ L +EM + D TY L+
Sbjct: 148 ASAELIKEMRSCRFAGDASTYGLV 171
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
EM ++G++ + TY LI L++ G A I M G+ PD ++Y +++ GLC
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC--- 62
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
N + K +V + D + L L LK GV PNV TY
Sbjct: 63 -------------KNGKLEKALVAGKVEDGWD---------LFCSLSLK-GVKPNVVTYT 99
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA--LQLRREM 519
+I K G AY+L +M G PD TYN LI A +LR D A +L +EM
Sbjct: 100 TMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIKEM 156
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 29/180 (16%)
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
MS+ G+V + ++Y +I+GL D A+E+ M+++ + P + +N+++D G CK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD--GLCK- 63
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG-NIYRAYSLKEEMLTKGLFPDVVTYN 497
N L + AL+ V+ G +++ + SLK G+ P+VVTY
Sbjct: 64 --NGKLEK----------------ALVAGKVEDGWDLFCSLSLK------GVKPNVVTYT 99
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
+I C + A L R+M + G PD +Y L+R + +R K A K ++S
Sbjct: 100 TMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR-AHLRDGDKAASAELIKEMRS 158
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 188/416 (45%), Gaps = 48/416 (11%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
++N +++G + G E L R++ + P +LV++N +IKGY ++ KA L+
Sbjct: 97 SYNGMISGYLRNGEFE-----LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE- 150
Query: 238 MADTGIQPNRVTC--NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK 295
I P R C N ++ +NG + +A+ + + + + V+ + Y +
Sbjct: 151 -----IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND-----VSWNALLSAYVQ 200
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
N + +A L+ R+N +V++N L+ G K + + A + M + D +
Sbjct: 201 NSKMEEACMLFKS-RENWA---LVSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVS 252
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
+N +I + GK EA + V D ++ M+ G +R + A+EL
Sbjct: 253 WNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEAREL----F 304
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP--NVFTYNALILAHVKSGN 473
+ + + WN ++ Y + + + + ++L F V P NV T+N +I + + G
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERME---MAKEL---FDVMPCRNVSTWNTMITGYAQCGK 358
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF-ALQLRREMVQKGHRPDLISYT 532
I A +L ++M + D V++ +I A + H F AL+L +M ++G R + S++
Sbjct: 359 ISEAKNLFDKMPKR----DPVSWAAMI-AGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+ + ++ + +++K G L MYCK +A +LF++
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 177/435 (40%), Gaps = 96/435 (22%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G+ E A +L M ++ D+ + N ++ G + + KA RE+ E P ++ +
Sbjct: 109 GEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKA-----RELFEIMPERDVCS 159
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+NT++ GY VD A ++ M + N V+ N L+ A +N ++EA +L
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEAC-----ML 210
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
++ LV+ + + K ++ ++A ++ M DVV++N +I G ++ +
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKI 266
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVM 394
+ A ++ + + D FT+ ++ + EA + M + +E+S+ M
Sbjct: 267 DEAR----QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAM 318
Query: 395 IRGLCFDRDIVRAKELL----------WCML-------------NNLM--VPK--PIVWN 427
+ G + AKEL W + NL +PK P+ W
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 428 LIIDLY--------------------GR------------CKDVSNAILTRDL---MLKF 452
+I Y GR C DV L + L ++K
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
G F NAL+L + K G+I A L +EM K D+V++N +I + A
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVA 494
Query: 513 LQLRREMVQKGHRPD 527
L+ M ++G +PD
Sbjct: 495 LRFFESMKREGLKPD 509
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 55/429 (12%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLI 219
I++ ++V+ G+ D+F N +V+ + G ++ A + EM E N+V++ ++I
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARK-VFDEMSE----RNVVSWTSMI 207
Query: 220 KGYCTVNSVDKALYLYSSMA-DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK 278
GY + A+ L+ M D + PN VT ++ A + L+ +K+ I N
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 279 DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAY 338
++ DL+ S + +D Y K A L++E ++++ L N + N +
Sbjct: 268 EVNDLMVSAL-VDMYMKCNAIDVAKRLFDEYGASNLD--------LCNAMASNYV----- 313
Query: 339 GYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGL 398
++G TREA + +M G+ PD IS I
Sbjct: 314 --------------------------RQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 399 CFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
R+I+ K +L N + N +ID+Y +C A D M + V
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM----SNKTV 403
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
T+N+++ +V++G + A+ E M K ++V++N +I + A+++
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 519 M-VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
M Q+G D ++ + G A+ Y I K+G+ D L +M+ +
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 578 EPVKAFNLF 586
+P A ++F
Sbjct: 520 DPESAMSIF 528
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 150/352 (42%), Gaps = 45/352 (12%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
+V+ L + + A D R E+G NL N + Y +AL +++ M D+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 242 GIQPNRVTC-----------NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
G++P+R++ NIL C L+ + + I N +
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN------------ALI 379
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
D Y K AF +++ M + VV +N ++ G +N ++ A+ M +K ++
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKT----VVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVM-SKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
++N +I L + EA + M S+ G+ D ++ + + AK
Sbjct: 436 ----SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 410 LLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
+ + + N + + ++D++ RC D +A+ + + + +V + A I A
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL----TNRDVSAWTAAIGAMA 547
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA--ACNLRSHDFALQLRREM 519
+GN RA L ++M+ +GL PD V + +GA AC SH +Q +E+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAF---VGALTAC---SHGGLVQQGKEI 593
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 4/249 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWL--VREMLEFGPLPNLVTYNTLIKGYCT 224
++ K F PD + ++ G K G + L +R + P+ VTY T++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
+D+A + + MA G+ NR+T N+L+ C+ + A+ +L E+ D PD+V
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 285 TSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
+ + +D + A + +NEMR + ++Y L+ + LA EM
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 345 LKKG-VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
+ V D +N+L+ + G +A ++ M + G P+ +Y + G+ R
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 404 IVRAKELLW 412
A LLW
Sbjct: 645 PGDAL-LLW 652
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 24/275 (8%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
E +YT V G ++ A ++ M + G + T+N ++ G CK +++A D
Sbjct: 452 EVTYT---TVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 198 WLVREMLE-FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
L+REM E G P++V+YN +I G ++ AL ++ M GI P +++ L+ A
Sbjct: 509 -LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Query: 257 LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEV 316
+G K A ++ +E++ND + DL+ + ++ Y + A + + M++N
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYP 627
Query: 317 DVVAYNVLINGLCKNQ------LMNLAYGYACEMLKKG-------------VLPDAFTYN 357
+V Y L NG+ + + L+ C + KK + PD +
Sbjct: 628 NVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLD 687
Query: 358 ILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
L + ++A I+ M + GI P++ YK
Sbjct: 688 TLADICVRAAFFKKALEIIACMEENGIPPNKTKYK 722
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
PD TY ++ A G A +L M++MG+ + I+Y V+++G C I RA++L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 411 LWCMLNNLMV-PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHV 469
L M + + P + +N+IID D + A+ + M G+ P +Y L+ A
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 470 KSGNIYRAYSLKEEMLTKGLFP-DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
SG A + +EM+ D++ +N+L+ C L + A ++ M + G P++
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 529 ISYTELV 535
+Y L
Sbjct: 630 ATYGSLA 636
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN---SMEVDVVAYNVLINGLCKNQLMNLA 337
PD T M Y KN + MR+ + D V Y +++ LM+ A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK-MGIVPDEISYKVMIR 396
EM + GV + TYN+L+ K+ + A +L M++ GI PD +SY ++I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY---GRCKDVSNAILTRDLMLKFG 453
G D A M + P I + ++ + G+ K ++N + ++M
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK-LANRVFD-EMMNDPR 589
Query: 454 VHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
V ++ +N L+ + + G I A + M G +P+V TY L R AL
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 514 QLRREMVQK 522
L +E+ ++
Sbjct: 650 LLWKEIKER 658
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
Query: 414 MLNNLMVPKPIVWNLIIDLY---GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
+L + P ++ ++ Y GR D + + HP+ TY ++ A V
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-GHRPDLI 529
+G + RA + EM G+ + +TYN+L+ C D A L REM + G PD++
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 530 SYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDW 589
SY ++ + ++ A + ++ G+ + L + +P A +F +
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 590 LESKR 594
+ R
Sbjct: 585 MNDPR 589
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 183/461 (39%), Gaps = 43/461 (9%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
Q G+ D +++ I L + A D L +++ L + Y +LI
Sbjct: 75 QPGYSHDSISYHSIFKSL-SLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKA 133
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV 288
A ++ TG + + CN L+ L +G A+K+ ++ + + L V
Sbjct: 134 QSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTL-GFGV 192
Query: 289 FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI-NGLCKNQLMNLAYGYACEMLKK 347
++ + ++ E Q L +E+++ ++ ++ +LI + LCK A+ E+
Sbjct: 193 YIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNI 252
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA 407
PD Y ++ A G E +L K+G+ P Y+ I L + + A
Sbjct: 253 DCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEA 312
Query: 408 KELLWCMLNNLMVPKPIVWNLIIDLYGRCK--DVSNAILTRDLMLKFGVHPNVFT----- 460
KE+ +++ P+ +++ L G D +A+ M+ G P + T
Sbjct: 313 KEVAEVIVSGKF---PMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLS 369
Query: 461 ------------------------------YNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
Y+ +I K+G + +Y+ +EM +GL
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLA 429
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEER 550
PDV YN LI A C A +L EM +G + +L +Y L+R+ G +E+
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
+ K+L+ G+ D L CK + A +F+ +E
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCME 530
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC---ENGHLK 264
P+ N + + LI V+ D A+ M TG P T + L LC ++ HL
Sbjct: 325 PMDNDI-LDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI 382
Query: 265 EAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVL 324
+A E+L+ +L + ++ + K ++++ EM++ + DV YN L
Sbjct: 383 KAY----ELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
I CK +++ A EM +G + TYN+LI L +EG+ E+ + M + GI
Sbjct: 439 IEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 385 VPDEISYKVMIRGLCFDRDIVRAKELLW-CM-LNNLMVPKPIVWNLIIDL--YGRCKDVS 440
PDE Y +I GLC + I A E+ CM ++ V + ++ +++L G + S
Sbjct: 499 EPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEAS 558
Query: 441 NAILTRDLMLKFGVH 455
+ R+ + G H
Sbjct: 559 QLLREREHLEHTGAH 573
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 145/375 (38%), Gaps = 51/375 (13%)
Query: 182 IVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADT 241
I++ LCK A +++ E+ P+ + Y + + + ++ + +
Sbjct: 229 ILHSLCKCSREMDAF-YILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 242 GIQPNRVTCNILVHALCENGHLKEAKKMLEEILND----DKDIPDLVTSTVFMDHYFKNR 297
G+ P + L L EAK++ E I++ D DI D + +V
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN-LAYGYACEMLK-KGVLPDAFT 355
EF+ M + + L LC++ + L Y E+L KG + +
Sbjct: 348 EFLVY------MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAY--ELLSSKGYFSELQS 399
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
Y+++I L K G+ RE+ L M K G+ PD Y +I C +++R + LW
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC-KAEMIRPAKKLW--- 455
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
D M G N+ TYN LI + G
Sbjct: 456 -------------------------------DEMFVEGCKMNLTTYNVLIRKLSEEGEAE 484
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP-DLISYTEL 534
+ L ++ML +G+ PD Y LI C + A+++ R+ +++ H+ +E
Sbjct: 485 ESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEF 544
Query: 535 VRESCIRGNTKEAEE 549
V C G++ EA +
Sbjct: 545 VLNLCSNGHSGEASQ 559
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 118/551 (21%), Positives = 214/551 (38%), Gaps = 67/551 (12%)
Query: 94 SGHEKGQH---AVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRL 150
+ + G H A F+A+ +L+G+ K++ I + + +C +S A V
Sbjct: 136 AARQPGFHHTRATFHAIFKILRGA----KLVTLMIDFLDRSVGFESCRHSLRLCDALVVG 191
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDW--LVREMLEFGP 208
+ G+ + A++ M +G D F ++ ++N L + EK D ++ + +
Sbjct: 192 YAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVE----EKCFDSFDVIFDQISVRG 247
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
VT++ L+K +C +D+A ++ ILV ALC +EA K
Sbjct: 248 FVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATK 307
Query: 269 MLEEI-----LNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+L+EI +N D+ + + + +F+Q S E++V YN
Sbjct: 308 LLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL-----EGCELEVFRYNS 362
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
++ L K ++ Y EM+ +GV P+ T N + K G EA + S++G
Sbjct: 363 MVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIG 422
Query: 384 IVPDEISYKVMIRGLCFDRDIVR-----------------------------------AK 408
P +SY +I LC + + + A+
Sbjct: 423 FAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
EL+ ++PK I II V +A++ +L K GV + + +LI
Sbjct: 483 ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGS 542
Query: 469 VK--SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD---FALQLRREMVQKG 523
+ G+I A L M KG P Y +I C + S + F L+ ++
Sbjct: 543 ITLMRGDI--AAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWE 600
Query: 524 HRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAF 583
H+ + +Y + + G K A Y + + G+ ++ Y K E+ A
Sbjct: 601 HK--VQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADAL 658
Query: 584 NLFQDWLESKR 594
+ F D E +
Sbjct: 659 HFFHDLREQGK 669
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 169/436 (38%), Gaps = 82/436 (18%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
LQ+I +G +VF +N +V L K ++ +D L EM+ G PN T N + +
Sbjct: 344 LQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILT-EMMVRGVSPNKKTMNAALCFF 402
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
C VD+AL LY S ++ G P ++ N L+H LC N +++A D
Sbjct: 403 CKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY--------------D 448
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
++ + H+ + F + L N LC ++A
Sbjct: 449 VLKGAIDRGHFLGGKTF----------------------STLTNALCWKGKPDMARELVI 486
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI-----------------V 385
++ +LP +I AL GK +A I + +K G+ +
Sbjct: 487 AAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLM 546
Query: 386 PDEISYKVMIR----GLCFDRDIVR------------AKELLWCMLN---NLMVPKPIVW 426
+I+ K++IR G R + R K +L +L K +
Sbjct: 547 RGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAY 606
Query: 427 NLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA----YSLKE 482
NL I+ G A L D+M + G+ P V + ++ +++K+ I A + L+E
Sbjct: 607 NLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Query: 483 EMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
+ TK Y ++I C D A+ EM +G +P + Y +++ C
Sbjct: 667 QGKTKKRL-----YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEE 721
Query: 543 NTKEAEERYAKILKSG 558
EA + KSG
Sbjct: 722 KYDEAVGLVNEFRKSG 737
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 169/431 (39%), Gaps = 87/431 (20%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K+E + R M+ G P FT++ ++NG K+G R ++ L +L
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS-DSLADLPLD 338
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
N L+ YC+ + +A Y++ + + PN V+ N ++ ENG ++A M +L
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHN----PNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 276 DDKDIPDLVT-----------------------------------STVFMDHYFKNREFI 300
PD T T + YFKNRE
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAE 454
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A +++ M+ E DVV + +I G + LA + EM ++ D F+ + +I
Sbjct: 455 SAQKVFDVMK----ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
GA C D ++R E+ C+
Sbjct: 511 GA------------------------------------CSDMAMLRQGEVFHCLAIRTGF 534
Query: 421 PKPI-VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
+ V ++D+YG+ + T + + +P++ +N+++ A+ + G + +A S
Sbjct: 535 DCVMSVCGALVDMYGK----NGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALS 590
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ-LRREMVQKGHRPDLISYTELVRES 538
E++L G PD VTY L + AAC+ R + L +M ++G + Y+ +V
Sbjct: 591 FFEQILENGFMPDAVTY-LSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLV 649
Query: 539 CIRGNTKEAEE 549
G EA E
Sbjct: 650 SKAGLVDEALE 660
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 152/397 (38%), Gaps = 57/397 (14%)
Query: 177 FTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYC-TVNSVDKALYLY 235
+ +N++++ + G +E+A R++ + P N+V+YN L Y + A L
Sbjct: 133 YANNNLISMYVRCGSLEQA-----RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLT 187
Query: 236 SSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK 295
+ MA ++PN T LV + + +I+ ++V T + Y
Sbjct: 188 THMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS-DNVVVQTSVLGMYSS 246
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ A +++ + D VA+N +I G KN + + ML GV P FT
Sbjct: 247 CGDLESARRIFDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 356 YNILIGALWKEGK-----------------------------------TREACYILGVMS 380
Y+I++ K G REA Y+ G +
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP--IVWNLIIDLYGRCKD 438
P+ +S+ +I G C + L++ L + P+P ++ I +
Sbjct: 363 N----PNLVSWNSIISG-CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
+ L + K G +VF L+ + K+ A + + M + DVV +
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER----DVVLWTE 473
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
+I L + + A+Q EM ++ +R D S + ++
Sbjct: 474 MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/409 (17%), Positives = 170/409 (41%), Gaps = 31/409 (7%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
L +++ G+ +V ++ G +E A R + + + V +NT+I G
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA-----RRIFDCVNNRDAVAWNTMIVGS 275
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
+ ++ L + +M +G+ P + T +I+++ + G K + I+ D + D
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS-LAD 334
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
L +D Y + +AF ++ + ++V++N +I+G +N A
Sbjct: 335 LPLDNALLDMYCSCGDMREAFYVFGRIHNP----NLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 343 EMLKKGV-LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+L+ PD +T++ I A + + + G ++K+G ++ +
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN 450
Query: 402 RDIVRAKELLWCMLNNLMVPKPIV-WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
R+ A+++ ++M + +V W +I + R + A+ M + + F+
Sbjct: 451 REAESAQKVF-----DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 461 YNALI-----LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+++I +A ++ G ++ +++ F V++ + GA ++ + +
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTG------FDCVMS---VCGALVDMYGKNGKYET 556
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
+ PDL + ++ G ++A + +IL++G M D V
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAV 605
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 176/401 (43%), Gaps = 48/401 (11%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
+ +++ ++ + FL DV+ + +V+ K G + A R E G N+V++N
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ----RVFDEMGD-RNVVSWN 222
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
+LI + +AL ++ M ++ ++P+ VT ++ A +K +++ ++ +
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
DK D++ S F+D Y K +A +++ M +V+A +I+G M
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR----NVIAETSMISGYA----MAA 334
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
+ A M K + ++N LI + G+ EA + ++ + + P S+ +++
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
C D EL M ++ V L + G
Sbjct: 395 A-CAD-----LAELHLGMQAHVHV-----------------------LKHGFKFQSGEED 425
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN-LLIGAACNLRSHDFALQL 515
++F N+LI +VK G + Y + +M+ + D V++N ++IG A N ++ AL+L
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNE-ALEL 480
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
REM++ G +PD I+ ++ G +E ++ + +
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 49/403 (12%)
Query: 140 SYTEHAATVRLL--CLEGKLEAA-IR-LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
S+T+ + +LL C++ KL A +R + +++ GF ++F N +++ K G +E
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC--NIL 253
R++ + P N+ T+N+++ G + +D+A L+ SM P R C N +
Sbjct: 75 -----RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM------PERDQCTWNSM 123
Query: 254 V-----HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
V H CE A E + ++ ++++ ++ K +Q SL
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG---VQVHSL--- 177
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ ++ DV + L++ K +N A EM + V+ ++N LI + G
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV----SWNSLITCFEQNGP 233
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW-N 427
EA + +M + + PDE++ +I I +E+ ++ N + I+ N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 428 LIIDLYGRCKDVSNAILTRDLMLKFGVHP--NVFTYNALILAHVKSGNIYRAYSLKEEML 485
+D+Y +C + A D M P NV ++I + + + A M
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSM------PIRNVIAETSMISGYAMAASTKAA----RLMF 343
Query: 486 TKGLFPDVVTYNLLIGAACNLRSHDFALQ----LRREMVQKGH 524
TK +VV++N LI ++ AL L+RE V H
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 15/253 (5%)
Query: 284 VTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD------VVAYNVLINGLCKNQLMNLA 337
V + F + F I A+S + D + +N ++ GL K ++ A
Sbjct: 46 VIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEA 105
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
M ++ D T+N ++ + + EA +M K G V +E S+ ++
Sbjct: 106 DSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 398 LCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
D+ + ++ + + + + + ++D+Y +C +V++A D M N
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD----RN 217
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRR 517
V ++N+LI ++G A + + ML + PD VT +I A +L + ++
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 518 EMVQKGH-RPDLI 529
+V+ R D+I
Sbjct: 278 RVVKNDKLRNDII 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 118/323 (36%), Gaps = 60/323 (18%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
R++ D+ N V+ K +++A R + + P+ N++ ++I GY
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEA-----RFIFDSMPIRNVIAETSMISGYAM 332
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML-------------- 270
S A +++ MA+ N V+ N L+ +NG +EA +
Sbjct: 333 AASTKAARLMFTKMAER----NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 271 -EEILNDDKDIP-------------------------DLVTSTVFMDHYFKNREFIQAFS 304
IL D+ D+ +D Y K + +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
++ +M ME D V++N +I G +N N A EML+ G PD T ++ A
Sbjct: 449 VFRKM----MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 365 KEGKTREACYILGVMSK-MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
G E + M++ G+ P Y M+ L + AK ++ M M P
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM---PMQPDS 561
Query: 424 IVWNLIIDLYGRCKDVSNAILTR 446
++W L CK N L +
Sbjct: 562 VIWG---SLLAACKVHRNITLGK 581
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 151/352 (42%), Gaps = 46/352 (13%)
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFS 304
P CN L+ + L+E KK+ E I +P +V + Y K + A
Sbjct: 84 PASTYCN-LIQVCSQTRALEEGKKVHEHIRTSGF-VPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALW 364
+++EM D+ ++NV++NG + L+ A EM +K D++++ ++
Sbjct: 142 VFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYV 193
Query: 365 KEGKTREACYILGVMSKM-GIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
K+ + EA + +M ++ P+ + + + + I R KE+ ++ +
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
++W+ ++D+YG+C + A R++ K V +V ++ ++I + KS +SL E
Sbjct: 254 VLWSSLMDMYGKCGCIDEA---RNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH------------------- 524
++ P+ T+ ++ A +L + + Q+ M + G
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 525 ------------RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHV 564
+PDL+S+T L+ G EA + + +LKSG DHV
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHV 421
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 171/415 (41%), Gaps = 57/415 (13%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-----WLVREMLEF---GPLPNLVT 214
L+R +K F P+ +V LC+ +A D L+RE ++ P T
Sbjct: 28 LKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPAST 87
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y LI+ ++++ ++ + +G P V N L+ + G L +A+K+ +E+
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK-NQL 333
N D L + V ++ Y + +A L++EM E D ++ ++ G K +Q
Sbjct: 148 NRD-----LCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQP 198
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
Y+ P+ FT +I + A R I G + + G+ DE+ +
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 394 MIR--GLC---------FDRDIVRAKELLWCMLNNLMVPKPIVW----NLIIDLYGRCK- 437
++ G C FD+ IV + W + + K W +L +L G C+
Sbjct: 259 LMDMYGKCGCIDEARNIFDK-IVEKDVVSWTSMIDRYF-KSSRWREGFSLFSELVGSCER 316
Query: 438 --------------DVSNAILTRDL---MLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
D++ L + + M + G P F ++L+ + K GNI A
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA--- 373
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
+ ++ PD+V++ LIG D AL+ +++ G +PD +++ ++
Sbjct: 374 -KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 174/384 (45%), Gaps = 26/384 (6%)
Query: 173 LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP--NLVTYNTLIKGYCTVNSVDK 230
L ++++ N++V+G K G+ LVR + F +P ++V++NT++ GY ++ +
Sbjct: 110 LRNLYSWNNMVSGYVKSGM-------LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHE 162
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
AL+ Y +GI+ N + L+ A ++ L+ ++ ++L + ++V S +
Sbjct: 163 ALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG-FLSNVVLSCSII 221
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
D Y K + A ++EM D+ + LI+G K M A CEM +K
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK--- 274
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
+ ++ LI ++G A + M +G+ P++ ++ + + KE+
Sbjct: 275 -NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
M+ + P IV + +ID+Y + + + R + H VF +N +I A +
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS--ERVFRICDDKHDCVF-WNTMISALAQ 390
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM-VQKGHRPDLI 529
G ++A + ++M+ + P+ T +++ A + + L+ M VQ G PD
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 530 SYTELV----RESCIRGNTKEAEE 549
Y L+ R C + ++ EE
Sbjct: 451 HYACLIDLLGRAGCFKELMRKIEE 474
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 28/288 (9%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G++E+A R M K D+ +++G K+G ME A L EM P N V+
Sbjct: 228 GQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEK-LFCEM----PEKNPVS 278
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
+ LI GY S ++AL L+ M G++P + T + + A L+ K++ ++
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ P+ + + +D Y K+ + ++ R + D V +N +I+ L ++ L
Sbjct: 339 RTNVR-PNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMISALAQHGLG 394
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS-KMGIVPDEISYKV 393
+ A +M+K V P+ T +++ A G E M+ + GIVPD+ Y
Sbjct: 395 HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC 454
Query: 394 MI----RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
+I R CF KEL+ + P +WN I+ G C+
Sbjct: 455 LIDLLGRAGCF-------KELMRKIEEMPFEPDKHIWNAIL---GVCR 492
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 162/379 (42%), Gaps = 25/379 (6%)
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENG---HLKEAKKMLEE 272
+ + + T + +A+ S+ GI R+ ++L L + G LK+ K +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGI---RLPFDLLASLLQQCGDTKSLKQGKWIHRH 71
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
+ P+ + S + Y K + I A ++++M ++ ++N +++G K+
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSG 127
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
++ A M ++ D ++N ++ ++G EA + + GI +E S+
Sbjct: 128 MLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFA 183
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKF 452
++ R + ++ +L + ++ IID Y +C + +A D M
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 453 GVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFA 512
+H + LI + K G++ A L EM K + V++ LI S + A
Sbjct: 244 DIH----IWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRA 295
Query: 513 LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNM 572
L L R+M+ G +P+ +++ + S + + +E + ++++ + + + + L +M
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 573 YCK---LEEPVKAFNLFQD 588
Y K LE + F + D
Sbjct: 356 YSKSGSLEASERVFRICDD 374
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 54/340 (15%)
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
++ GF V +V+ K G +E A L MLE N+V++N++I Y +
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQ-LFDGMLE----RNVVSWNSMIDAYVQNEN 317
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM--LEEILNDDKDIPDLVT 285
+A+ ++ M D G++P V+ +HA + G L+ + + L L D+++ +V
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV-SVVN 376
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
S + M Y K +E A S++ +++ ++ V++N +I G +N A Y +M
Sbjct: 377 SLISM--YCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ V PD FTY +I A+ + T A +I GV+ + C D+++
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS----------------CLDKNV- 473
Query: 406 RAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALI 465
V ++D+Y +C + A L D+M + +V T+NA+I
Sbjct: 474 ------------------FVTTALVDMYAKCGAIMIARLIFDMMSE----RHVTTWNAMI 511
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
+ G A L EEM + P+ VT+ L + +AC+
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTF-LSVISACS 550
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 172/421 (40%), Gaps = 38/421 (9%)
Query: 143 EHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVRE 202
EH A + LL L+ ++ ++ + G + F +V+ C+ G +++A
Sbjct: 37 EHPAAL-LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARV---- 91
Query: 203 MLEFGPLPNL--VTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCEN 260
F P+ + V Y+T++KG+ V+ +DKAL + M ++P L+ +
Sbjct: 92 ---FEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
L+ K++ ++ + DL T + Y K R+ +A +++ M E D+V+
Sbjct: 149 AELRVGKEIHGLLVKSGFSL-DLFAMTGLENMYAKCRQVNEARKVFDRMP----ERDLVS 203
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
+N ++ G +N + +A M ++ + P T ++ A+ I G
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 381 KMGI--VPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
+ G + + + V + C + R + + ++ + WN +ID Y + ++
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQ------LFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
A+L ML GV P + + A G++ R + + + GL +V N
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 499 LIGAACNLRSHDFALQL-----RREMV----------QKGHRPDLISYTELVRESCIRGN 543
LI C + D A + R +V Q G D ++Y +R ++ +
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 544 T 544
T
Sbjct: 438 T 438
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 30/397 (7%)
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
W ++ + P + V+Y TLIKGY N +A+ L+ M + GI N VT ++ A
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISAC 183
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
G + + +ML+ + K + ST + Y A L++EM E +
Sbjct: 184 SHLGGIWDC-RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP----ERN 238
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+V +NV++NG K L+ A E+ + D ++ +I ++ + EA
Sbjct: 239 LVTWNVMLNGYSKAGLIEQAE----ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK-----PIVWNLIIDL 432
M + G+ P E+ ++ R + +K L L+ +V + + II
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASA--RSVGSSKGL---QLHGTIVKRGFDCYDFLQATIIHF 349
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
Y VSN I + V ++ + NALI VK+G + +A + ++ K D
Sbjct: 350 YA----VSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK----D 401
Query: 493 VVTYNLLIGAACNLRSHDFALQLRREMVQKGH-RPDLISYTELVRESCIRGNTKEAEERY 551
+ ++N +I S AL L REM+ +PD I+ + G+ +E + +
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 552 AKILKSGL-MNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
+ S + ND++ I+ +MY K A N+F
Sbjct: 462 DYLNFSTIPPNDNLTAAII-DMYAKCGSIETALNIFH 497
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 170/390 (43%), Gaps = 33/390 (8%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
++ T N ++NG K GL+E+A + L ++ E ++V++ T+I G N +D+AL
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEE-LFDQITE----KDIVSWGTMIDGCLRKNQLDEALVY 292
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
Y+ M G++P+ V L+ A + + ++ I+ D D + +T+ H++
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII--HFY 350
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
I+ L + + S++ + + N LI G KN ++ A E+ + D F
Sbjct: 351 AVSNDIK---LALQQFEASVKDHIASRNALIAGFVKNGMVEQAR----EVFDQTHDKDIF 403
Query: 355 TYNILIGALWKEGKTREACYILGVM-SKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
++N +I + + A ++ M S + PD I+ + + + K
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAI----LTRDLMLKFGVHPNVFTYNALILAHV 469
+ + + P + IID+Y +C + A+ T+++ + +NA+I
Sbjct: 464 LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNI-----SSSTISPWNAIICGSA 518
Query: 470 KSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-----GH 524
G+ A L ++ + + P+ +T+ ++ A C H ++L + + G
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC----HAGLVELGKTYFESMKSDHGI 574
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKI 554
PD+ Y +V G +EA+E K+
Sbjct: 575 EPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 19/284 (6%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK----VGLMEKAHDWLVREM 203
V+ L LE A+ ++ M KGF+ D +++++ G K G+++ L +E+
Sbjct: 208 VKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLK-----LYQEL 262
Query: 204 LE--FGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA--DTGIQPNRVTCNILVHALCE 259
E G + + V Y L+KGY +A+ Y ++ ++ + + N ++ AL E
Sbjct: 263 KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSE 322
Query: 260 NGHLKEAKKMLEEILNDDKDIP-----DLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
NG EA K+ + + + + P +L T V ++ Y +F +A ++ +M
Sbjct: 323 NGKFDEALKLFDAV-KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC 381
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
D +++N L+N LC N+L+ A EM +K V PD +TY +L+ +KEGK E
Sbjct: 382 SPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAA 441
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
M + + P+ Y + L + AK M++ L
Sbjct: 442 YYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKL 485
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 171/407 (42%), Gaps = 15/407 (3%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
AA +R + K A ++L + Q G P++ T+N I V E A + + +
Sbjct: 138 AAQLR----QAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHY-KLFI 192
Query: 205 EFGPL-PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
+ PL P++ T+ L+KG + ++++KA+ + MA G + V + L+ +N
Sbjct: 193 DNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDA 252
Query: 264 KEAKKMLEEILND-DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE-MRQNS-MEVDVVA 320
K+ +E+ + D V M YF +A + E + +NS + + +A
Sbjct: 253 DGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMA 312
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF-----TYNILIGALWKEGKTREACYI 375
YN ++ L +N + A + K+ P T+N+++ GK EA +
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
M PD +S+ ++ LC + + A++L M + P + L++D +
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK 432
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
+ M++ + PN+ YN L +K+G + A S + M++K L D
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEA 491
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRG 542
Y ++ A D L++ EM+ E V+E +G
Sbjct: 492 YKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKG 538
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 159/427 (37%), Gaps = 53/427 (12%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGL---CKVGLMEKAHDWLVREMLEFG 207
L E LE A R V P +FT N ++ K G + + H ++ + G
Sbjct: 105 LIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQA----G 160
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG-IQPNRVTCNILVHALCENGHLKEA 266
PN++TYN + + Y V + AL Y D + P+ T ILV L N +L++A
Sbjct: 161 IAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKA 220
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN--SMEVDVVAYNVL 324
++ E++ + D V + M KN + L+ E+++ D V Y L
Sbjct: 221 MEIKEDMAVKGF-VVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 325 INGLCKNQLMNLAYGYACEMLKKG--VLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+ G ++ A E + + V A YN ++ AL + GK EA + + K
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE 339
Query: 383 GIVPDEI-----SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
P + ++ VM+ G C A E+ M +
Sbjct: 340 HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD--------------------- 378
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
F P+ ++N L+ + + A L EM K + PD TY
Sbjct: 379 --------------FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYG 424
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKS 557
LL+ D + MV+ RP+L Y L + G +A+ + ++
Sbjct: 425 LLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Query: 558 GLMNDHV 564
M+D
Sbjct: 485 LKMDDEA 491
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 31/258 (12%)
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
I+PN T N ++ + G + +++ E+ + P++ + V M+ Y +A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
+W EM+ + D+VAYN +I GLC N + A +M KG+ TY L+
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 363 LWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPK 422
K G + M + G D ++ + ++ GLC DRD R
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRV--------------- 405
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
V A + +D + + +P+ Y L+ + G + RA +++
Sbjct: 406 ----------------VEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQA 449
Query: 483 EMLTKGLFPDVVTYNLLI 500
EM+ KG P TY I
Sbjct: 450 EMVGKGFKPSQETYRAFI 467
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 52/338 (15%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
++ LIK +D A+ + + GI TCN L+ + KM E+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 275 N-DDKDI-----------PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN-SMEVDVVAY 321
DD + P+ T M +++ E +W EM + +V +Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 322 NVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSK 381
NVL+ C LM+ A EM +GV+ D YN +IG
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIG-------------------- 324
Query: 382 MGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSN 441
GLC + ++V+AKEL M + + + +++ Y + DV +
Sbjct: 325 ---------------GLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDS 369
Query: 442 AILTRDLMLKFGVHPNVFTYNALI--LAHVKSGN-IYRAYSLKEEMLTKGLF-PDVVTYN 497
++ M + G + T AL+ L + G + A + ++ + + +F P Y
Sbjct: 370 GLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYE 429
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
LL+ C D AL ++ EMV KG +P +Y +
Sbjct: 430 LLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 46/251 (18%)
Query: 154 EGKLEAAIRLQRIMVQK-GFLPDVFTHNHIVNGLCKVGLMEKAHD-WLVREMLEFGPLPN 211
EG+ E R+ R M ++ G P+V+++N ++ C GLM +A W EM G + +
Sbjct: 258 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW--EEMKVRGVVYD 315
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
+V YNT+I G C+ V KA L+ M GI+ +T LV+ C+ G +
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVD------- 368
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKN 331
++ EM++ E D + L+ GLC +
Sbjct: 369 -----------------------------SGLVVYREMKRKGFEADGLTIEALVEGLCDD 399
Query: 332 QLMNLAYGYACEMLKKGV-----LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
+ A +++K V P Y +L+ L ++GK A I M G P
Sbjct: 400 RDGQRVV-EAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKP 458
Query: 387 DEISYKVMIRG 397
+ +Y+ I G
Sbjct: 459 SQETYRAFIDG 469
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
R++ + G PNV++YN L+ A+ G + A + EEM +G+ D+V YN +IG C+
Sbjct: 269 REMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCS 328
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
A +L R+M KG ++Y LV C G+ Y ++ + G D +
Sbjct: 329 NFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT 388
Query: 566 VQILFNMYC 574
++ L C
Sbjct: 389 IEALVEGLC 397
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 423 PIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKE 482
P V++L+I K++ A++ + G++ + T NALI + Y +
Sbjct: 162 PFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYR 221
Query: 483 EM-------------LTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-GHRPDL 528
E+ + + P+ T+N ++ + + ++ REM ++ G P++
Sbjct: 222 EVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV 281
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
SY L+ C RG EAE+ + ++ G++ D V + C E VKA LF+D
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 19/306 (6%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PNL+ +NT+ +G+ + AL LY M G+ PN T ++ + ++ KE +++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+L D+ DL T + Y +N A ++++ S DVV+Y LI G
Sbjct: 157 HGHVLKLGCDL-DLYVHTSLISMYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYA 211
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ A E+ K D ++N +I + G +EA + M K + PDE
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 390 SYKVMIRGLCFDRDIVRAKEL-LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRD 447
+ ++ I +++ LW + IV N +IDLY +C ++ A L
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV-NALIDLYSKCGELETACGLFER 326
Query: 448 LMLKFGVHPNVFTYNALILAHVKSGNIYR-AYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
L K +V ++N LI + N+Y+ A L +EML G P+ VT ++ A +L
Sbjct: 327 LPYK-----DVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 507 RSHDFA 512
+ D
Sbjct: 381 GAIDIG 386
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 155/386 (40%), Gaps = 51/386 (13%)
Query: 136 ACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKA 195
C+ H + + + G+LE A ++ K DV ++ ++ G G +E A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKV----FDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 196 HDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVH 255
+++ + P+ ++V++N +I GY + +AL L+ M T ++P+ T +V
Sbjct: 220 -----QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 256 ALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSME 315
A ++G + E + + ++D +L +D Y K E A L+ +
Sbjct: 275 ACAQSGSI-ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK--- 330
Query: 316 VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYI 375
DV+++N LI G L A EML+ G P+ T ++ AC
Sbjct: 331 -DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL----------PACAH 379
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGR 435
LG + + I ++ + + A L +ID+Y +
Sbjct: 380 LGAIDIGRWIHVYIDKRL--------KGVTNASSLR---------------TSLIDMYAK 416
Query: 436 CKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVT 495
C D+ A + +L H ++ ++NA+I G ++ L M G+ PD +T
Sbjct: 417 CGDIEAAHQVFNSIL----HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQ 521
+ L+ A + D + R M Q
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
P+ + + M RG D V A +L CM++ ++P + ++ + K
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
+LK G +++ + +LI +V++G + A+ ++ K DVV+Y LI +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH----KVFDKSPHRDVVSYTALIKGYAS 212
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
+ A +L E+ K D++S+ ++ GN KEA E + ++K+ + D
Sbjct: 213 RGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 23/294 (7%)
Query: 245 PNRVTCNILVHALCENGHLKE------------AKKMLEEILN--DDKDIPDLVTSTVFM 290
P+ V + L + GH+KE KK L D + PD+V +
Sbjct: 541 PDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVL 600
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ + +++ AF + +++Q + V Y +++ + + NL + + +M +K +
Sbjct: 601 NACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM-QKSSI 659
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+A Y +L+ LWKEGK+ EA + + M GIV Y + R LC R E
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLC---SAGRCNE- 715
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
LN + P+V LI +L + V + + P V TY LI A V
Sbjct: 716 ---GLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVD 772
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
SGNI A + ++M K P++VT N+++ A + A +L ++M + G+
Sbjct: 773 SGNIKNAAYIFDQM-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGN 825
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 170/420 (40%), Gaps = 33/420 (7%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWL--VREMLEFGPLP-NLVTYNTLIKGYCTVNSVDKA 231
D+ ++N ++ C G ++ A D + M G L + TY T+IK + A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 232 LYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMD 291
L + M G+ PN T + L+ A G +++A + EE+L + P+ + +
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCE-PNSQCFNILLH 452
Query: 292 HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLP 351
+ ++ +AF L+ + +S+ + A +++ G + P
Sbjct: 453 ACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSS-------------------P 493
Query: 352 DAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+ N G + + YI + P +Y ++++ D R KEL+
Sbjct: 494 NILKNN---GPGSLVNRNSNSPYIQA-SKRFCFKPTTATYNILLKAC--GTDYYRGKELM 547
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
M + + P I W+ +ID+ G DV A+ M G P+V Y I ++
Sbjct: 548 DEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAEN 607
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAAC---NLRSHDFALQLRREMVQKGHRPDL 528
+ A+SL EEM + P+ VTYN L+ A +L L + ++M G++P+
Sbjct: 608 KCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPND 667
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
EL+ E C G +E + KI N PV +L + A NL D
Sbjct: 668 HFLKELIEEWC-EGVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAID 726
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 151/367 (41%), Gaps = 52/367 (14%)
Query: 142 TEHAATVRLLCLEGKLEAA---IRLQRIMVQKGFLP-DVFTHNHIVNGLCKVGLMEKAHD 197
T + ++ CL G+++ A + + M G L D FT+ I+ KV K
Sbjct: 336 TSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTII----KVFADAKMWK 391
Query: 198 WLVR---EMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILV 254
W ++ +M G PN T+++LI V++A +L+ M +G +PN NIL+
Sbjct: 392 WALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
Query: 255 HALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
HA E A ++ + V +++ D + ++ R +S
Sbjct: 452 HACVEACQYDRAFRLFQSWKGSS------VNESLYAD------------DIVSKGRTSSP 493
Query: 315 EVDVVAYNVLIN---GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI---GALWKEGK 368
N+L N G N+ N Y A + P TYNIL+ G + GK
Sbjct: 494 -------NILKNNGPGSLVNRNSNSPYIQASKRF--CFKPTTATYNILLKACGTDYYRGK 544
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
++ M +G+ P++I++ +I D+ A +L M + P + +
Sbjct: 545 E-----LMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTT 599
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN---IYRAYSLKEEML 485
I + K + A + M ++ + PN TYN L+ A K G+ + + ++ ++M
Sbjct: 600 AIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMR 659
Query: 486 TKGLFPD 492
G P+
Sbjct: 660 NAGYKPN 666
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV- 385
GLC + + + Y Y ++LK+ + P+ + N L+ + + Y L V M I+
Sbjct: 278 GLCGDYVKS-RYIYE-DLLKENIKPNIYVINSLMNV-----NSHDLGYTLKVYKNMQILD 330
Query: 386 --PDEISYKVMIRGLCFDRDIVRA----KELLWCMLNNLMVPKPIVWNLIIDLYGRCKDV 439
D SY ++++ C + A KE + L+ + II ++ K
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLL 499
A+ +D M GV PN T+++LI A +G + +A L EEML G P+ +N+L
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 500 IGAACNLRSHDFALQL 515
+ A +D A +L
Sbjct: 451 LHACVEACQYDRAFRL 466
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G +E A+R+ R M G PDV + + +C K L EM + PN VT
Sbjct: 573 GDVEGAVRILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKPNWVT 631
Query: 215 YNTLIKG---YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
YNTL+K Y ++ V + L +Y M + G +PN L+ CE G ++E + +
Sbjct: 632 YNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE-GVIQENGQSQD 690
Query: 272 EILNDDKD 279
+I + + D
Sbjct: 691 KISDQEGD 698
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 165/414 (39%), Gaps = 85/414 (20%)
Query: 109 NMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQR-IM 167
N + ++ R K E+ISL + + + + + C EG ++ A+ + R I+
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL 243
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
F P T+ H+ GL + G + A L+REML G + YN LI+GY +
Sbjct: 244 ANAPFAPSSVTYRHLTKGLVQAGRIGDAAS-LLREMLSKGQAADSTVYNNLIRGYLDLGD 302
Query: 228 VDKALYL-----------------------------------YSSMADTGIQPNRVTCNI 252
DKA+ Y S+ D + + T N+
Sbjct: 303 FDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNV 362
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLV-----TSTVFMDHYFKNREFIQAFSLW- 306
L+ + G EA + E+L D+ P+++ T + ++ FK EF +A + +
Sbjct: 363 LLEVFLKFGKKDEAWALFNEML-DNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFK 421
Query: 307 ---NEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI--- 360
+++ +D + Y ++ C+ ++ A + E + + + DA ++ +I
Sbjct: 422 KVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAY 481
Query: 361 --------------------------------GALWKEGKTREACYILGVMSKMGIVPDE 388
G L K GK E+ +L M + PD
Sbjct: 482 LKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDP 541
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLY---GRCKDV 439
Y V++RGLC + +AK+++ M+ + + ++ II+++ GR +++
Sbjct: 542 SIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEI 595
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 37/270 (13%)
Query: 325 INGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG- 383
+ L + ++ A A + + P FT N +I A+++ + E+ + K
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI 443
IVP+ +SY +I C + ++ A E+
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVY-------------------------------- 239
Query: 444 LTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
R ++ P+ TY L V++G I A SL EML+KG D YN LI
Sbjct: 240 --RHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
+L D A++ E+ K D I + +GN KEA E Y +L H
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRM-H 356
Query: 564 VPV-QILFNMYCKLEEPVKAFNLFQDWLES 592
P +L ++ K + +A+ LF + L++
Sbjct: 357 PPTGNVLLEVFLKFGKKDEAWALFNEMLDN 386
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 147/345 (42%), Gaps = 18/345 (5%)
Query: 247 RVTCNILVHALCENGHLKEAKKML-EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSL 305
R+ + V +L L A K+ + + ++ + P + T + ++ + + ++ SL
Sbjct: 145 RLNLHNRVQSLIRASDLDAASKLARQSVFSNTR--PTVFTCNAIIAAMYRAKRYSESISL 202
Query: 306 WNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL-PDAFTYNILIGAL 363
+ +Q+++ +VV+YN +IN C ++ A +L P + TY L L
Sbjct: 203 FQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGL 262
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ G+ +A +L M G D Y +IRG D +A E + + V
Sbjct: 263 VQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDG 322
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLML--KFGVHPNVFTYNALILAHVKSGNIYRAYSLK 481
IV ++ + + A+ + +L KF +HP T N L+ +K G A++L
Sbjct: 323 IVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP--TGNVLLEVFLKFGKKDEAWALF 380
Query: 482 EEMLTKGLFPDVVTYN-----LLIGAACNLRSHDFALQLRREMVQK-GHRP---DLISYT 532
EML P++++ N +++ + A+ +++ K +P D + Y
Sbjct: 381 NEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC 440
Query: 533 ELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLE 577
+V C +G EAE +A+ + L D + + + Y K E
Sbjct: 441 NIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAE 485
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 152/364 (41%), Gaps = 30/364 (8%)
Query: 162 RLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKG 221
R+ +++ GF D N IV L + G + A R++ + P N V+ NT+I G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAA-----RKVYDEMPHKNTVSTNTMISG 88
Query: 222 YCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK-DI 280
+ V A L+ +M D + VT IL+ N H EA K+ ++ +
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 281 PDLVTSTVFM----DHYFKNR-EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
PD VT T + D +N + AF++ N + NVL+ C+ + ++
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF---LTVSNVLLKSYCEVRRLD 201
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
LA C + ++ D+ T+N LI K+G E+ ++ M + G P + ++ ++
Sbjct: 202 LA----CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ + D ++L + V N I+D Y + V + D M +
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL--- 314
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ +YN +I ++ ++ + EM G + ++ A NL S LQ+
Sbjct: 315 -DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS----LQM 369
Query: 516 RREM 519
R++
Sbjct: 370 GRQL 373
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
Y+TLI+ Y + + A+ + M G + V+ N L++A + + + ++ +EI
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 275 ND-DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL 333
+K IPD ++ + + Y + +A + +M+ MEV +A+ +++ L K
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKV 393
+ +A EM+KKG D YN+ I + KE R ++ MS MG+ PD ISY
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPER-VKELIEEMSSMGLKPDTISYNY 283
Query: 394 MIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVW-NLIIDL-YGRCKDVSNAILTRDLML 450
++ C + AK++ + N P + LI L Y R + AI + + +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYM 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 37/194 (19%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
+P+ ++Y LIK YC + +KA+ + M G++ + ++ +L + G L+ A
Sbjct: 171 IPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD- 229
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+LWNEM + E+D AYNV I
Sbjct: 230 -----------------------------------NLWNEMVKKGCELDNAAYNVRIMSA 254
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
K + EM G+ PD +YN L+ A + G EA + + P+
Sbjct: 255 QKESPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNA 313
Query: 389 ISYKVMIRGLCFDR 402
+++ +I LC+ R
Sbjct: 314 ATFRTLIFHLCYSR 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 229 DKALYLYSSMADTGIQP--NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
DKAL +Y++++D P +R + V L + + + ++E ND K + S
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYS 106
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
T+ + Y + F A + +M Q V++N L+N ++ + E+ +
Sbjct: 107 TL-IRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
+ YN I+PD+ISY ++I+ C +
Sbjct: 166 R--------YN-------------------------KIIPDKISYGILIKSYCDSGTPEK 192
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A E++ M M I + I+ + ++ A + M+K G + YN I+
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ K + R L EEM + GL PD ++YN L+ A C D A ++ + P
Sbjct: 253 SAQKE-SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKSGLMN 561
+ ++ L+ C ++ E+ YA KS M+
Sbjct: 312 NAATFRTLIFHLCY---SRLYEQGYAIFKKSVYMH 343
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISY--KVMIRGLCFDRDIVRAKELLWCMLNNL 418
L KE +A I +S P Y ++ +R L R + L+ N+
Sbjct: 38 STLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDP 97
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAY 478
+ + ++ +I YG+ ++A+ T + M ++G + ++NAL+ A + S N +
Sbjct: 98 KIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVP 157
Query: 479 SLKEEMLTK--GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
L +E+ + + PD ++Y +LI + C+ + + A+++ R+M KG I++T ++
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
Query: 537 ESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
+G + A+ + +++K G D+ + M + E P + L ++
Sbjct: 218 SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEE 268
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 194/466 (41%), Gaps = 58/466 (12%)
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
++ G + N +VN K GL+ +A + + EMLE N+ ++N +I Y N+
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARN-VFDEMLE----RNVYSWNAVIAAYVKFNN 69
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCE-NGHLKEAKKMLEEILNDDKD---IPDL 283
V +A L+ S + + +T N L+ + +G EA +M E+ +KD I D
Sbjct: 70 VKEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 284 VTST----------VFMDHY--------------FKNREFIQAFSLWNEMRQ-------N 312
+T VF F I +S + ++ +
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 313 SME-VDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
+E VD VA N +I C+ ++ A + L D ++N LI + G E
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSV---FWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIID 431
A + M + G+ DE S+ ++ L + + KE+ +L N V + I+D
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
+Y +C ++ A + L+ FG N+++ +++I+ + G + A L + + K L
Sbjct: 304 VYCKCGNMKYA-ESAHLLYGFG---NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNL-- 357
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMV-QKGHRPDLISYTELVRESCIRGNTKEAEER 550
V + + NLR D L+L R + + + PD + ++ ++ + +E
Sbjct: 358 --VVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEI 415
Query: 551 YAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRDS 596
+ L++G++ D V +MY K A +F E RD+
Sbjct: 416 HGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE--RDT 459
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
AYG E +KG P A T +IL+ AL GK REA +I + I D + Y +I+
Sbjct: 723 AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIK 782
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPI-VWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ + A E+ + ++ VP I +N +I +YGR + AI + G++
Sbjct: 783 AMLEAGKLQCASEI-YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
+ Y +I+ + K G + A SL EM KG+ P +YN+++ R H +L
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+ M + G DL +Y L++ EAE+ + + G+
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 8/340 (2%)
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
+ D+ L+ P++V Y +++ Y V + A + M + G +P+ V C +
Sbjct: 170 QVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM 229
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTV--FMDHYFKNREF-IQAFSLWNEMR 310
LC ML ++ L++++V FM + + F + LW EM
Sbjct: 230 ---LCTYARWGRHSAML-TFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV 285
Query: 311 QNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTR 370
+ + + Y ++++ K A EM G +P+ TY+ +I K G
Sbjct: 286 EEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWE 345
Query: 371 EACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+A + M GIVP + M+ + +A L M N + ++ LII
Sbjct: 346 KAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
+YG+ +A + + + + TY A+ H+ SGN+ +A + E M T+ +
Sbjct: 406 RIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIP 465
Query: 491 PDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLIS 530
Y +++ +++ D A + R + + G PD S
Sbjct: 466 LSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG-LPDASS 504
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 19/376 (5%)
Query: 111 LKGSLERLKMMREN-ISLVKIGLRGYACEYSYTEHAATVRLLCLE---GKLEAAIRLQRI 166
L G + ++KM E + ++++G CE + A +LC G+ A + +
Sbjct: 197 LYGQVGKIKMAEETFLEMLEVG-----CE---PDAVACGTMLCTYARWGRHSAMLTFYKA 248
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD-WLVREMLEFGPLPNLVTYNTLIKGYCTV 225
+ ++ L +N +++ L K K D WL EM+E G PN TY ++ Y
Sbjct: 249 VQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWL--EMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
++AL + M G P VT + ++ + G ++A + E+ + +P T
Sbjct: 307 GFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED-MRSQGIVPSNYT 365
Query: 286 STVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEML 345
+ Y+K + +A SL+ +M +N + D V ++I K L + A E
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 346 KKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR-DI 404
+ +L D TY + G +A ++ +M I +Y VM++ C+ +
Sbjct: 426 RLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQ--CYAKIQN 483
Query: 405 VRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
V E + L+ +P N +++LY R A ++ VH ++ Y
Sbjct: 484 VDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTA 543
Query: 465 ILAHVKSGNIYRAYSL 480
+ + K G + A L
Sbjct: 544 MRVYCKEGMVAEAQDL 559
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 1/283 (0%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P ++I Y ++ A L+ A+ G P VT +ILV+AL G +EA+ +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
L + ++ D V + + + A ++ M + + + YN +I+
Sbjct: 762 SRTCLEKNIEL-DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 330 KNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEI 389
+ ++ A + G+ D Y +I K GK EA + M K GI P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 390 SYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLM 449
SY +M++ R ELL M N + +I +Y + A T L+
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 450 LKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
+ G+ + +++L+ A VK+G + A +M G+ PD
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%)
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
W L P +V+ +++ LYG+ + A T ML+ G P+ ++ + +
Sbjct: 177 WMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARW 236
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G + + + + + YN ++ + H + L EMV++G P+ +Y
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 532 TELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
T +V +G +EA + + ++ G + + V + ++ K + KA L++D
Sbjct: 297 TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 125/323 (38%), Gaps = 40/323 (12%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G LE A L +KG P T + +VN L G +A + + R LE + V
Sbjct: 718 GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA-EHISRTCLEKNIELDTVG 776
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YNTLIK + A +Y M +G+ + T N ++ L +A ++
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 275 NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLM 334
+ + + + + M HY K + +A SL++EM++ ++ +YN+++ ++L
Sbjct: 837 RSGLYLDEKIYTNMIM-HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLH 895
Query: 335 NLAYGYACEMLKKGVLPDAFTYNILI---------------------------------- 360
+ M + G D TY LI
Sbjct: 896 HEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSL 955
Query: 361 -GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
AL K G EA MS+ GI PD + +++G D + M+ + +
Sbjct: 956 LSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Query: 420 VPKPIVWNLIIDLY---GRCKDV 439
V +++ DLY G+ +DV
Sbjct: 1016 EDDRFVSSVVEDLYKAVGKEQDV 1038
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 146/353 (41%), Gaps = 5/353 (1%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P TY L K D+A L+ M G++P L+ ++ L +A
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
LE + + PD+ T TV + K F S+ EM + V YN +I+G
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 330 KNQLMNLAYGYACEMLKKG-VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
K + +M++ G LPD T N +IG+ R+ MG+ PD
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 389 ISYKVMIRGLCFDRDIVRAK--ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
++ ++I L F + + K ++ M + +N++I+ +G+ +
Sbjct: 322 TTFNILI--LSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
M GV PN TY +L+ A+ K+G + + S+ +++ + D +N +I A
Sbjct: 380 RKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQA 439
Query: 507 RSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
+L +M ++ +PD I++ +++ G +E +++ S +
Sbjct: 440 GDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 10/279 (3%)
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK--GVLPDAFTYNI 358
QA L+ M ++ + Y LI+ K++L++ A+ E +K PD FT+ +
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS-TLEYMKSVSDCKPDVFTFTV 220
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
LI K G+ I+ MS +G+ ++Y +I G + +L M+ +
Sbjct: 221 LISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 419 -MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRA 477
+P N II YG +++ GV P++ T+N LIL+ K+G +
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM 340
Query: 478 YSLKEEMLTKGLFPDVVTYNLLI---GAACNLRSHDFALQLRREMVQKGHRPDLISYTEL 534
S+ + M + VTYN++I G A + D + R+M +G +P+ I+Y L
Sbjct: 341 CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMD---DVFRKMKYQGVKPNSITYCSL 397
Query: 535 VRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
V G + + +I+ S ++ D + N Y
Sbjct: 398 VNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAY 436
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFG-PLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
T+N I++G K G+ E+ L +M+E G LP++ T N++I Y ++ K YS
Sbjct: 252 TYNTIIDGYGKAGMFEEMESVLA-DMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST--VFMDHYF 294
G+QP+ T NIL+ + + G K+ +++ + +K L T T + ++ +
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM---EKRFFSLTTVTYNIVIETFG 367
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
K + ++ +M+ ++ + + Y L+N K L+ +++ V+ D
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP 427
Query: 355 TYNILIGALWKEG--KTREACYILGVMSKMGIVPDEISYKVMIR 396
+N +I A + G T + YI M + PD+I++ MI+
Sbjct: 428 FFNCIINAYGQAGDLATMKELYIQ--MEERKCKPDKITFATMIK 469
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 13/234 (5%)
Query: 189 VGLMEKAHDW-----LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK-------ALYLYS 236
+ LM KA W + ++L+ GP PN ++Y ++ + + S + L +
Sbjct: 388 IWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLN 447
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
M D G++P R N ++ A C A + + + D+ + P +++ + K
Sbjct: 448 KMEDKGLKPQRRHWNAVLVA-CSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 506
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
+ + +AF +WN M + +E ++ AY + + L Q NL EM KG+ P T+
Sbjct: 507 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 566
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
N +I + G + A M + P+EI+Y+++I L D A EL
Sbjct: 567 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 40/364 (10%)
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKAL----YLYSSMADTG--IQPNRVTCNILVHALCEN 260
G LP L + +IKG+ + A+ +L +++G I PN N L+ A+
Sbjct: 142 GELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGF 200
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
G EA+K+L++ + ++ +P++VT M Y + EF++A + + ++ E + +
Sbjct: 201 G---EAEKILKD-MEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPIT 256
Query: 321 YNVLI-------NGL-------------CKNQLMN-LAYGYACEMLKKGVLPDAFTYNIL 359
Y+ + +G+ K ++ N + Y + E +K Y ++
Sbjct: 257 YSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVM 316
Query: 360 IGALWKEGK-TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
L K+ T +L M G+ P ++ +I + + KEL +
Sbjct: 317 RRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERF 376
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTY-------NALILAHVKS 471
V N +I L G+ K A+ + +L G PN +Y N L+ A K
Sbjct: 377 SEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKR 436
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G L +M KGL P +N ++ A A+Q+ + MV G +P +ISY
Sbjct: 437 GIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISY 496
Query: 532 TELV 535
L+
Sbjct: 497 GALL 500
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 188/492 (38%), Gaps = 80/492 (16%)
Query: 166 IMVQKGFLP-DVFTHNHIVNGLCKVGLMEKAH---DWLVREMLEFGPL--PNLVTYNTLI 219
++ KG LP VF ++ G K ++ A DWL R+ E G + PNL YN+L+
Sbjct: 137 VLKDKGELPLQVFCA--MIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLL 194
Query: 220 KGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD 279
+K L M + GI PN VT N L+ E G +A +L+ L +K
Sbjct: 195 GAMRGFGEAEKIL---KDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILD--LTKEKG 249
Query: 280 I-PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN------------SMEVDVVAYNVLIN 326
P+ +T + + Y + + + A + E+R+ E + V I
Sbjct: 250 FEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIG 309
Query: 327 GLCKNQLMNLAY---GYACEMLK-------KGVLPDAFTYNILIGA-------------- 362
+C + + +LK GV P + LI A
Sbjct: 310 RICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELY 369
Query: 363 ------------------LWKEGKTREACYILGVMSKM---GIVPDEISYKVMIR----- 396
+W GK ++ L + + G P+ +SY++++
Sbjct: 370 KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 429
Query: 397 -GLCFDRDIVR-AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
R I R LL M + + P+ WN ++ + + + AI M+ G
Sbjct: 430 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 489
Query: 455 HPNVFTYNALILAHVKSGNIY-RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFAL 513
P V +Y AL L+ ++ G +Y A+ + M+ G+ P++ Y + + +
Sbjct: 490 KPTVISYGAL-LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD 548
Query: 514 QLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMY 573
L +EM KG P ++++ ++ G + A E + ++ + + + ++L
Sbjct: 549 TLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Query: 574 CKLEEPVKAFNL 585
+P A+ L
Sbjct: 609 ANDAKPRLAYEL 620
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 13/290 (4%)
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
L+ + +HY +E L+ +R+ E+ + N LI + K + A
Sbjct: 352 LIWACTREEHYIVGKE------LYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYE 405
Query: 343 EMLKKGVLPDAFTY-------NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
++L +G P+ +Y NIL+ A K G R +L M G+ P + ++
Sbjct: 406 DLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVL 465
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVH 455
+ A ++ M++N P I + ++ + K A + M+K G+
Sbjct: 466 VACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIE 525
Query: 456 PNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQL 515
PN++ Y + +L +EM +KG+ P VVT+N +I A +
Sbjct: 526 PNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEW 585
Query: 516 RREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVP 565
M + P+ I+Y L+ + A E + K GL P
Sbjct: 586 FHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKP 635
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 169/424 (39%), Gaps = 39/424 (9%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHN-------HIVNGLCK----VGLMEK-------- 194
EG+ A+ + + +KGF P+ T++ + +G+ V L EK
Sbjct: 232 EGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGN 291
Query: 195 --AHDWLVREMLEFGPLPNLVT---YNTLIKGYCTV-NSVDKALYLYSSMADTGIQPNRV 248
+DW EF L N + Y + + N + L L ++M G++P+R
Sbjct: 292 DVGYDW----EFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSRE 347
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
L+ A H K++ + I +I L + K +++ A ++ +
Sbjct: 348 EHERLIWACTREEHYIVGKELYKRIRERFSEI-SLSVCNHLIWLMGKAKKWWAALEIYED 406
Query: 309 MRQN-------SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
+ S E+ V +N+L++ K + +M KG+ P +N ++
Sbjct: 407 LLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLV 466
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
A K +T A I M G P ISY ++ L + A + M+ + P
Sbjct: 467 ACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEP 526
Query: 422 KPIVWNLIID-LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
+ + L G+ K L +++ K G+ P+V T+NA+I ++G AY
Sbjct: 527 NLYAYTTMASVLTGQQKFNLLDTLLKEMASK-GIEPSVVTFNAVISGCARNGLSGVAYEW 585
Query: 481 KEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
M ++ + P+ +TY +LI A N A +L + +G + Y +V+ +
Sbjct: 586 FHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAET 645
Query: 541 RGNT 544
G T
Sbjct: 646 YGAT 649
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
+V+ YNV + K++ + + EML++G+ PD T+ +I + G + A
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 377 GVMSKMGIVPDEISYKVMIR--GLCFDRDIV-----RAKELLWCMLNNLMVPKPIVWNLI 429
MS G PD ++ MI G + D+ RA+ W + + ++ +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI-------DAVTFSTL 286
Query: 430 IDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGL 489
I +YG + + + M GV PN+ YN LI + ++ ++A + ++++T G
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 490 FPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
P+ TY L+ A R D AL + REM +KG +I Y L+
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 392
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 9/315 (2%)
Query: 147 TVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEF 206
T+++ LE + +L M+++G PD T I++ + G+ ++A +W +M F
Sbjct: 181 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF-EKMSSF 239
Query: 207 GPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEA 266
G P+ VT +I Y +VD AL LY + + VT + L+ +G+
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 267 KKMLEEILNDDKDI---PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
+ EE+ K + P+LV +D + + QA ++ ++ N + Y
Sbjct: 300 LNIYEEM----KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
L+ + + + A EM +KG+ YN L+ EA I M
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 384 IV-PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
PD ++ +I + A+ L M P V +I YG+ K V +
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDV 475
Query: 443 ILTRDLMLKFGVHPN 457
+ T D +L+ G+ P+
Sbjct: 476 VRTFDQVLELGITPD 490
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 136/321 (42%), Gaps = 2/321 (0%)
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P ++ YN +K + ++K+ L+ M + GI+P+ T ++ +NG K A
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 268 KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
+ E++ + + PD VT +D Y + A SL++ R +D V ++ LI
Sbjct: 231 EWFEKMSSFGCE-PDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRI 289
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
+ + EM GV P+ YN LI ++ + + +A I + G P+
Sbjct: 290 YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTR 446
+Y ++R R A + M + I++N ++ + + V A + +
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQ 409
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNL 506
D+ P+ +T+++LI + SG + A + +M G P + +I
Sbjct: 410 DMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Query: 507 RSHDFALQLRREMVQKGHRPD 527
+ D ++ ++++ G PD
Sbjct: 470 KQVDDVVRTFDQVLELGITPD 490
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 414 MLNNLM-VPKP----IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAH 468
+LNNL+ KP I++N+ + ++ + KD+ + D ML+ G+ P+ T+ +I
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 469 VKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDL 528
++G RA E+M + G PD VT +I A + D AL L + R D
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 529 ISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQD 588
++++ L+R + GN Y ++ G+ + V L + + + P +A +++D
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M++ P T+N +++G CK ++ A ++ M G P++VT++TLI GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAK-RMLDSMASKGCSPDVVTFSTLINGYCKAK 59
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
VD + ++ M GI N VT L+H C+ G L A+ +L E+++ PD +T
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV-APDYITF 118
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQN 312
+ +E +AF++ +++++
Sbjct: 119 HCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 75/145 (51%)
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
ML++ + P TYN++I K + A + + M +KG PDVVT++ LI C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
D +++ EM ++G + ++YT L+ C G+ A++ +++ G+ D++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 569 LFNMYCKLEEPVKAFNLFQDWLESK 593
+ C +E KAF + +D +S+
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
C + +++ A R+ M KG PDV T + ++NG CK ++ + EM G +
Sbjct: 20 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC-EMHRRGIVA 78
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N VTY TLI G+C V +D A L + M G+ P+ +T + ++ LC L++A +L
Sbjct: 79 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 138
Query: 271 EEI 273
E++
Sbjct: 139 EDL 141
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 280 IPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYG 339
P +T +D + K A + + M DVV ++ LING CK + ++
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 340 YACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC 399
CEM ++G++ + TY LI + G A +L M G+ PD I++ M+ GLC
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 400 FDRDIVRAKELL 411
+++ +A +L
Sbjct: 127 SKKELRKAFAIL 138
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
I P +T N ++ C+ + +AK+ML+ + + PD+VT + ++ Y K +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS-PDVVTFSTLINGYCKAKRVDNG 64
Query: 303 FSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGA 362
++ EM + + + V Y LI+G C+ ++ A EM+ GV PD T++ ++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 363 LWKEGKTREACYILGVMSK 381
L + + R+A IL + K
Sbjct: 125 LCSKKELRKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M + I P I+Y MI G C + AK +L M + P + ++ +I+ Y + K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNL 498
V N + M + G+ N TY LI + G++ A L EM++ G+ PD +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 499 LIGAACN 505
++ C+
Sbjct: 121 MLAGLCS 127
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
ML + P I +N +ID + + V +A D M G P+V T++ LI + K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
+ + EM +G+ + VTY LI C + D A L EM+ G PD I++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 534 LVRESCIRGNTKEA 547
++ C + ++A
Sbjct: 121 MLAGLCSKKELRKA 134
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 66/141 (46%)
Query: 344 MLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRD 403
ML+ + P TYN +I K+ + +A +L M+ G PD +++ +I G C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 404 IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNA 463
+ E+ M +V + + +I + + D+ A + M+ GV P+ T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 464 LILAHVKSGNIYRAYSLKEEM 484
++ + +A+++ E++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+ YN +I+G CK ++ A M KG PD T++ LI K + I
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M + GIV + ++Y +I G C D+ A++LL M++ + P I ++ + L G C
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM--LAGLC 126
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 154/353 (43%), Gaps = 50/353 (14%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDK 230
GF D+F N +V+ ++GL+ +A R++ + P+ +LV++N+LI GY + ++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRA-----RQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
AL +Y + ++ I P+ T + ++ A +K+ + + L + +V + +
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS-VVVVNNGLV 249
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
Y K R A +++EM D V+YN +I G K +++ + E L
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVEESVRMFLENL----- 300
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
D F PD ++ ++R RD+ AK +
Sbjct: 301 -DQFK------------------------------PDLLTVSSVLRACGHLRDLSLAKYI 329
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVK 470
ML V + V N++ID+Y +C D+ I RD+ V ++N++I +++
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDM---ITARDVFNSMECKDTV-SWNSIISGYIQ 385
Query: 471 SGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
SG++ A L + M+ D +TY +LI + L F L ++ G
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 158/364 (43%), Gaps = 21/364 (5%)
Query: 175 DVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYL 234
D ++N ++ G K+ ++E++ + + +F P +L+T +++++ + + A Y+
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP--DLLTVSSVLRACGHLRDLSLAKYI 329
Query: 235 YSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYF 294
Y+ M G NIL+ + G + A+ + + + D V+ + Y
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM-----ECKDTVSWNSIISGYI 384
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAF 354
++ + ++A L+ M + D + Y +LI+ + + G +K G+ D
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
N LI K G+ ++ L + S MG D +++ +I D ++ M
Sbjct: 445 VSNALIDMYAKCGEVGDS---LKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL---MLKFGVHPNVFTYNALILAHVKS 471
+ +VP + + + + C ++ L +++ +L+FG + NALI + K
Sbjct: 501 RKSEVVPDMATFLVTLPM---CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISY 531
G + + + E M + DVVT+ +I A + AL+ +M + G PD + +
Sbjct: 558 GCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 532 TELV 535
++
Sbjct: 614 IAII 617
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
+++D V++N+ I C+ +++ AY EM K G+ PD TY LI AL+K +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
+ +M G P+ ++ V I+ L R A +LL M + P I +N++I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 433 Y--GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
+ R D++ + T M G PN+ Y +I K+GN AY++ ++ + K +
Sbjct: 292 FFLARFPDMAERVYT--AMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 491 PDVVTYNLLI 500
P++ T +L+
Sbjct: 350 PNLDTVEMLL 359
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 135 YACEYSYTEHAATVRLLCLEGKLEAAIR-LQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
Y C+ S A +++L L L + G D + N + C++G+++
Sbjct: 135 YGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILD 194
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
A+ +REM + G P++VTY TLI L++ M G +PN T N+
Sbjct: 195 GAY-MAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVR 253
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
+ L +A +L ++ + PD +T + + +F R A ++ M
Sbjct: 254 IQFLVNRRRAWDANDLLL-LMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC 373
+ ++ Y +I+ LCK +LAY + ++K P+ T +L+ L K+G+ +A
Sbjct: 313 YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Query: 374 YILGVMSK 381
I+ ++ +
Sbjct: 373 SIMELVHR 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIG 361
A+ EM ++ + DVV Y LI+ L K++ + G M+ KG P+ T+N+ I
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 362 ALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP 421
L + +A +L +M K+ + PD I+Y ++I+G R A+ + M P
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 422 KPIVWNLIIDLYGRCKDVSNA-ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
++ +I + + A + +D M K +PN+ T L+ VK G + +A S+
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK-KWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 481 KE 482
E
Sbjct: 375 ME 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 246 NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD-----LVTSTVFMDHYFKNREFI 300
NR V L G L +E++L K +P + + + Y K
Sbjct: 70 NRFAFEDTVSRLAGAGRLD----FIEDLLEHQKTLPQGRREGFIVRIIML--YGKAGMTK 123
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNIL 359
QA + M + V ++N + L N ++ + + + K G+ DA ++NI
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIA 183
Query: 360 IGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLM 419
I + + G A + M K G+ PD ++Y +I L C++ N +
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHER---------CVIGNGL 234
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
WNL++ LK G PN+ T+N I V + A
Sbjct: 235 ------WNLMV-------------------LK-GCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
L M + PD +TYN++I R D A ++ M KG++P+L Y ++ C
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 540 IRGN 543
GN
Sbjct: 329 KAGN 332
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 295 KNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ-LMNLAYGYACEMLKKG-VLPD 352
K F++ +L E+ + E+ V YN +I C + L N A+ +ML+ PD
Sbjct: 122 KRNNFVE--TLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPD 179
Query: 353 AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLW 412
TY +L+ +L K CY+ Y +R L
Sbjct: 180 LETYTLLLSSLLKRFNKLNVCYV---------------YLHAVRSLTKQ----------- 213
Query: 413 CMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSG 472
M +N ++P V N+II Y +C +V AI M +G PN +TY+ L+ + G
Sbjct: 214 -MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 473 NIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYT 532
+ + +EM KG+ P+ Y +LI + R D A+++ +M+ PD+++Y
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Query: 533 ELVRESCIRGNTKEAEE 549
++ E C G EA E
Sbjct: 333 TVLTELCRGGRGSEALE 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 36/202 (17%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L ++M G +P+ N +IK Y VD+A+ ++ MA G +PN T + LV +C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
E G + Q + EM+ M +
Sbjct: 270 EKGRVG------------------------------------QGLGFYKEMQVKGMVPNG 293
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
Y VLI L + ++ A +ML + PD TYN ++ L + G+ EA ++
Sbjct: 294 SCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Query: 379 MSKMGIVPDEISYKVMIRGLCF 400
K V E +Y+ ++ + F
Sbjct: 354 WKKRDPVMGERNYRTLMDEVYF 375
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
CLE ++ AIR+ + M G P+ +T++++V G+C+ G + + + +EM G +PN
Sbjct: 236 CLE--VDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY-KEMQVKGMVPN 292
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE 271
Y LI +D+A+ + M + P+ +T N ++ LC G EA +M+E
Sbjct: 293 GSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVE 352
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNR 297
E D + + T+ + YF N+
Sbjct: 353 EWKKRDPVMGERNYRTLMDEVYFLNK 378
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%)
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
A + L + + + IPD + + Y K E +A ++ EM E + Y+ L+
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
G+C+ + G+ EM KG++P+ Y +LI +L E + EA ++ M +
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 386 PDEISYKVMIRGLC 399
PD ++Y ++ LC
Sbjct: 326 PDMLTYNTVLTELC 339
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 272 EILNDDKDIPDLVTSTVFMDHYFKNRE-------FIQAF-SLWNEMRQNSMEVDVVAYNV 323
++L D PDL T T+ + K ++ A SL +M+ N + D N+
Sbjct: 169 KMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNM 228
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
+I K ++ A EM G P+A+TY+ L+ + ++G+ + M G
Sbjct: 229 IIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKG 288
Query: 384 IVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
+VP+ Y V+I L +R + A E+++ ML N + P + +N ++
Sbjct: 289 MVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVL 335
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYS-SMADTGIQPNRVTCNILVHALCENGHLKEAK 267
+PN+V +K V VD AL L+ + P+ +L L + +
Sbjct: 169 VPNMVHITQSLK---IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQ 225
Query: 268 KMLEEILNDDKDIPDLVTSTV--FMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
+ EE++ D DL + + + K + AF + + +++ ++D YN L+
Sbjct: 226 SLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLM 285
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
L A+ M K L D TY ++I +L K G+ A + M + +
Sbjct: 286 MLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR 345
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILT 445
P + ++ + + + ++ M P ++ +ID Y + + A+
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 446 RDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACN 505
D M K G PN Y +I +H KSG + A ++ ++M G P TY+ L+
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 506 LRSHDFALQLRREMVQKGHRPDLISYTELV 535
D A+++ M G RP L SY L+
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 3/275 (1%)
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSM---EVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
V D + R+F+ SL+ EM Q+S ++ AYN +I L K + + +A+ +
Sbjct: 210 VLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKA 269
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
+ G D TYN L+ +G +A I M K + D +Y+++I L +
Sbjct: 270 QESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRL 329
Query: 405 VRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
A +L M + P V++ ++D G+ + ++ M FG P+ + +L
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I ++ K+G + A L +EM G P+ Y ++I + + A+ + ++M + G
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGL 559
P +Y+ L+ G A + Y + +GL
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 156/388 (40%), Gaps = 3/388 (0%)
Query: 138 EYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHD 197
+ S+ + ++ L KLE A + + G D T+N+++ GL KA +
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 198 WLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
+ M + L + TY +I +D A L+ M + ++P+ + LV ++
Sbjct: 300 -IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSM 358
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
+ G L + K+ E + P +D Y K + A LW+EM+++ +
Sbjct: 359 GKAGRLDTSMKVYME-MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
Y ++I K+ + +A +M K G LP TY+ L+ G+ A I
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M+ G+ P SY ++ L R + A ++L M + + + ++ +Y +
Sbjct: 478 SMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM-KAMGYSVDVCASDVLMIYIKDA 536
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
V A+ M G+ N F L + +K+G A L E ++ D+V Y
Sbjct: 537 SVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYT 596
Query: 498 LLIGAACNLRSHDFALQLRREMVQKGHR 525
++ + D QL + H+
Sbjct: 597 SILAHLVRCQDEDKERQLMSILSATKHK 624
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 67 SSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNAL-DNMLKGSLERLKMMRENI 125
S+ ++ ++ ++ +L++ M + +VF++L D+M K R +
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG-------RLDT 366
Query: 126 SL-VKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVN 184
S+ V + ++G+ S T + + GKL+ A+RL M + GF P+ + I+
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 185 GLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQ 244
K G +E A + ++M + G LP TY+ L++ + VD A+ +Y+SM + G++
Sbjct: 427 SHAKSGKLEVAMT-VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 245 PNRVTCNILVHALCENGHLKEAKKMLEEI 273
P + L+ L + A K+L E+
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 129 KIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCK 188
+IG RG + ++ ++ L +L+ + +M G+L +V T N V LCK
Sbjct: 137 EIGKRGLVNDKTF---RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCK 193
Query: 189 VGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRV 248
L+E+A ++ + EF P+ +TY T+I+G+C V + +A L++ M D G +
Sbjct: 194 EKLVEEAKFVFIK-LKEFIK-PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
++ L + EA K+ +++ D V +D KN A +++E
Sbjct: 252 AGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDE 311
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL-PDAFTYNILIGALWKEG 367
MR+ + VD + + LI GL + + AYG L +GV PD Y+ LI L K
Sbjct: 312 MRERGVYVDNLTWASLIYGLLVKRRVVEAYG-----LVEGVENPDISIYHGLIKGLVKIK 366
Query: 368 KTREACYILGVMSKMGIVPDEISYKVMIRG 397
+ EA + M + G P +Y ++++G
Sbjct: 367 RASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 7/262 (2%)
Query: 209 LPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKK 268
L N T+ ++K + + K + + M G N T N V LC+ ++EAK
Sbjct: 143 LVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKF 202
Query: 269 MLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
+ ++ K PD +T + + + I+A LWN M +VD+ A ++ L
Sbjct: 203 VFIKLKEFIK--PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETL 260
Query: 329 CK-NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPD 387
K NQ + + + K+G D Y ++I L K G+ A + M + G+ D
Sbjct: 261 LKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVD 320
Query: 388 EISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRD 447
+++ +I GL R +V A L+ + N P +++ +I + K S A
Sbjct: 321 NLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFR 376
Query: 448 LMLKFGVHPNVFTYNALILAHV 469
M++ G P + TY L+ H+
Sbjct: 377 KMIQRGCEPIMHTYLMLLQGHL 398
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLC-------- 399
G L + T N + L KE EA ++ + K I PDEI+Y+ MI+G C
Sbjct: 176 GYLYNVETMNRGVETLCKEKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEA 234
Query: 400 -----------FDRDIVRAKELLWCMLNN-----------LMVPK------PIVWNLIID 431
FD DI K+++ +L +MV K + ++ID
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 432 LYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFP 491
+ + A D M + GV+ + T+ +LI + + AY L E + P
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----P 350
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVR 536
D+ Y+ LI ++ A ++ R+M+Q+G P + +Y L++
Sbjct: 351 DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYIL 376
D VAYN++I +N+A EM G+ PD TY +I GK +A +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN----NLMVPKPIVWNLIIDL 432
MSK V + ++Y ++ G+C D+ RA ELL M L+ P + + L+I
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS-LKEEMLTKGLFP 491
+ + V A+L D M G PN T LI +++ +A S L ++++ G
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVS 343
Query: 492 DVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCI 540
++ + ++ + A ++ R M+ +G RPD ++ + + RE C+
Sbjct: 344 LSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 14/290 (4%)
Query: 121 MRENISLVKIGLRGYACEYSYTEHAATVRL---LCLEGKL-EAAIRLQRIMVQKGFLPDV 176
+R L+K + Y E + + T+R+ LC + L + A+ + R + D
Sbjct: 107 IRAKPDLIKYVIESYRKEECFV-NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADT 165
Query: 177 FTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYS 236
+N ++ G + A D L++EM G P+++TY ++I GYC +D A L
Sbjct: 166 VAYNLVIRLFADKGDLNIA-DMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 237 SMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKD---IPDLVTSTVFMDHY 293
M+ N VT + ++ +C++G ++ A ++L E+ +D P+ VT T+ + +
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAF 284
Query: 294 FKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK--GV-L 350
+ R +A + + M + V VLI G+ +N A + L K GV L
Sbjct: 285 CEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSL 344
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCF 400
+ F+ + +L + + EA I +M G+ PD ++ + R LC
Sbjct: 345 SECFSSATV--SLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 28/260 (10%)
Query: 338 YGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRG 397
Y AC++LK PD Y I E +E C++ + ++
Sbjct: 98 YTKACDILKIRAKPDLIKYVI-------ESYRKEECFV------------NVKTMRIVLT 138
Query: 398 LCFDRDIVRAKELLWCMLNNL---MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
LC ++ A E LW + + + +NL+I L+ D++ A + M G+
Sbjct: 139 LCNQANL--ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGL 196
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
+P+V TY ++I + +G I A+ L +EM + VTY+ ++ C + AL+
Sbjct: 197 YPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALE 256
Query: 515 LRREMVQKGH----RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
L EM ++ P+ ++YT +++ C + +EA ++ G M + V +L
Sbjct: 257 LLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Query: 571 NMYCKLEEPVKAFNLFQDWL 590
+ +E VKA + D L
Sbjct: 317 QGVLENDEDVKALSKLIDKL 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
V D YN++I +G A ++ M +G+ PD I+Y MI G C I A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 409 ELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFG---VHPNVFTYNAL 464
L M + V + ++ I++ + D+ A+ L ++ + G + PN TY +
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH 524
I A + + A + + M +G P+ VT +LI + +D ++ +++ K
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG---VLENDEDVKALSKLIDKLV 337
Query: 525 RPDLISYTELVRESCIR----GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPV 580
+ +S +E + + +EAE+ + +L G+ D + +F C LE +
Sbjct: 338 KLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYL 397
Query: 581 KAFNLFQD 588
F L+Q+
Sbjct: 398 DCFLLYQE 405
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 166/379 (43%), Gaps = 27/379 (7%)
Query: 180 NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA 239
N++ N L K ME + + ++ P P++ ++N +I GY +AL LY M
Sbjct: 166 NYLWNSLVKF-YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMV 224
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAK--KMLEEILNDDKDI--PDLVTSTVFMDHYFK 295
GI+P+ T +L +C GHL + + K + + + +L+ S +D YFK
Sbjct: 225 SDGIEPDEYT--VLSLLVC-CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFK 281
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+E A ++ M++ M ++N ++ G + M A +M K+ D +
Sbjct: 282 CKESGLAKRAFDAMKKKDMR----SWNTMVVGFVRLGDMEAAQAVFDQMPKR----DLVS 333
Query: 356 YNILIGALWKEG----KTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELL 411
+N L+ K+G RE Y + ++ K + PD ++ +I G + ++ + +
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEK--VKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 412 WCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS 471
++ + + + +ID+Y +C + A ++ K +V + ++I
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAF----MVFKTATEKDVALWTSMITGLAFH 447
Query: 472 GNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-GHRPDLIS 530
GN +A L M +G+ P+ VT ++ A + + L + M K G P+
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 531 YTELVRESCIRGNTKEAEE 549
Y LV C G +EA++
Sbjct: 508 YGSLVDLLCRAGRVEEAKD 526
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 66/397 (16%)
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
L F P PN+ YNT+I + S ++ LYSSM + P+R T L+ A + L
Sbjct: 92 LNFTPNPNVFVYNTMISAVSS--SKNECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFL 146
Query: 264 KEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNV 323
E K++ I+ V+ + + +Y LWN + + ME+
Sbjct: 147 SEVKQIHCHII---------VSGCLSLGNY-----------LWNSLVKFYMELG------ 180
Query: 324 LINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMG 383
+G A ++ + PD ++N++I K+G + EA + M G
Sbjct: 181 -------------NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 384 IVPDEISYKVMIRGLCFDR--DIVRAKELL-WCMLNNLMVPKPIVW-NLIIDLYGRCKDV 439
I PDE Y V+ +C DI K + W + ++ N ++D+Y +CK+
Sbjct: 228 IEPDE--YTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 440 SNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN-L 498
A D M K ++ ++N +++ V+ G++ A ++ ++M + D+V++N L
Sbjct: 286 GLAKRAFDAMKK----KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSL 337
Query: 499 LIG---AACNLRSHDFALQLRREM-VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
L G C+ R+ +L EM + + +PD ++ L+ + G + +
Sbjct: 338 LFGYSKKGCDQRT---VRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV 394
Query: 555 LKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLE 591
++ L D L +MYCK +AF +F+ E
Sbjct: 395 IRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 46/302 (15%)
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
+CNI+++ +NG L+ A+ + E + K + D V+ T +D Y + + +AF L+ +
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERV----KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
+ D V + V+I+GL +N+L A +M++ G+ P TY++L+ +
Sbjct: 426 LHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+ +I V++K C+D D+ I+ N
Sbjct: 482 LDQGKHIHCVIAKTTA--------------CYDPDL-------------------ILQNS 508
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
++ +Y +C + +A ++ K V + ++N++I+ G +A +L +EML G
Sbjct: 509 LVSMYAKCGAIEDAY---EIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK-GHRPDLISYTELVRESCIRGNTKEA 547
P+ VT+ ++ A + L+L + M + +P + Y ++ G KEA
Sbjct: 565 KKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA 624
Query: 548 EE 549
EE
Sbjct: 625 EE 626
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 192/454 (42%), Gaps = 93/454 (20%)
Query: 151 LCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP 210
LC +G+ E A+ L M ++ +V + N +V GL + G MEKA +++ + P
Sbjct: 148 LCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKA-----KQVFDAMPSR 198
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
++V++N +IKGY + +++A L+ M+ + N VT +V+ C G ++EA
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREA---- 250
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+ L+ EM E ++V++ +I+G
Sbjct: 251 --------------------------------YRLFCEMP----ERNIVSWTAMISGFAW 274
Query: 331 NQLMNLAYGYACEMLK--KGVLPDAFTYNILIGALWKEGKTREACYILGV-MSKMGIVPD 387
N+L A EM K V P+ T LI + AC LGV ++G +
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGET---LISLAY-------ACGGLGVEFRRLG---E 321
Query: 388 EISYKVMIRGL-CFDRDIVRAKELLWCMLNNLMVPKPIVW----------NLIIDLYGRC 436
++ +V+ G D D AK L+ ++ ++ N+II+ Y +
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
D+ A L + + ++ ++I ++++G++ RA+ L +++ K D VT+
Sbjct: 382 GDLERA---ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTW 434
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
++I A L +MV+ G +P +Y+ L+ + N + + + I K
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Query: 557 SGLMNDHVPVQILFN----MYCKLEEPVKAFNLF 586
+ D P IL N MY K A+ +F
Sbjct: 495 TTACYD--PDLILQNSLVSMYAKCGAIEDAYEIF 526
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 33/269 (12%)
Query: 133 RGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLM 192
RG++ E A +R L EG L A L + Q+G + V +++ K G +
Sbjct: 40 RGFS-----NEEALILRRLS-EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYL 93
Query: 193 EKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNI 252
++A R + E P N+VT N ++ GY +++A L+ M N V+ +
Sbjct: 94 DEA-----RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTV 143
Query: 253 LVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQN 312
++ ALC++G ++A ++ +E+ ++V+ + +N + +A +++ M
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
DVV++N +I G +N M A +M +K V+ T+ ++ + G REA
Sbjct: 199 ----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREA 250
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFD 401
+ M + IV S+ MI G ++
Sbjct: 251 YRLFCEMPERNIV----SWTAMISGFAWN 275
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 313 SMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
S+E DV +YN LI GLC A E+ KG+ PD T+NIL+ + +GK E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 373 CYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDL 432
I M + + D SY + GL + L + N + P + +I
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 433 YGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPD 492
+ + AI + K G P F +N+L+ A K+G++ AY L +E+ K L D
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Query: 493 VVTYNLLIGAACNLRSHDFALQL 515
++ A D A ++
Sbjct: 352 EAVLQEVVDALVKGSKQDEAEEI 374
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P++ +YNTLIKG C S +A+ L + + G++P+ +T NIL+H G +E +++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 270 LEEIL--NDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLING 327
++ N +DI + + K+ E + SL+++++ N ++ DV + +I G
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMV---SLFDKLKGNELKPDVFTFTAMIKG 291
Query: 328 LCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREA 372
++ A + E+ K G P F +N L+ A+ K G A
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 9/268 (3%)
Query: 147 TVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHN---HIVNGLCKVGLMEKAHDWLVREM 203
TVR L K E ++ I+ ++ P++ I+N +VG+ E A + EM
Sbjct: 77 TVRRLAAAKKFEW---VEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK-VFDEM 132
Query: 204 LEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSM-ADTGIQPNRVTCNILVHALCENGH 262
E +++N L+ D ++ + I+P+ + N L+ LC G
Sbjct: 133 PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGS 192
Query: 263 LKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYN 322
EA +++EI N PD +T + + + +F + +W M + +++ D+ +YN
Sbjct: 193 FTEAVALIDEIENKGLK-PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 323 VLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKM 382
+ GL ++ + PD FT+ +I EGK EA + K
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 383 GIVPDEISYKVMIRGLCFDRDIVRAKEL 410
G P + + ++ +C D+ A EL
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 12/310 (3%)
Query: 262 HLKEAKKM--LEEILNDDKDIPDLVTSTV---FMDHYFKNREFIQAFSLWNEMRQNSMEV 316
L AKK +EEIL + P++ ++ Y + F A +++EM + + +
Sbjct: 80 RLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKR 139
Query: 317 DVVAYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILIGALWKEGKTREACYI 375
+++N L+N ++ +L G E+ K + PD +YN LI L +G EA +
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 376 LGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPI-VWNLIIDLYG 434
+ + G+ PD I++ +++ + + E +W + V + I +N +
Sbjct: 200 IDEIENKGLKPDHITFNILLHE-SYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 435 RCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV 494
+ D + + P+VFT+ A+I V G + A + +E+ G P
Sbjct: 259 MENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKF 318
Query: 495 TYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKI 554
+N L+ A C + A +L +E+ K D E+V ++ ++G+ ++ E ++
Sbjct: 319 VFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV-DALVKGSKQDEAEEIVEL 377
Query: 555 LKSGLMNDHV 564
K+ ND++
Sbjct: 378 AKT---NDYL 384
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 191/441 (43%), Gaps = 36/441 (8%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A RLL LE E + R V+KGF D + ++ +V+ K +E A RE+
Sbjct: 216 SACSRLLWLERGKE----IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA-----REVF 266
Query: 205 EFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLK 264
+ P +LV +N++IKGY + + + M G +P++ T ++ A + +L
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 265 EAK----KMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
K ++ ++N D+ + +D YFK E A +++++ +++ E +
Sbjct: 327 HGKFIHGYVIRSVVN-----ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE----S 377
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMS 380
+NV+I+ A +M+ GV PD T+ ++ A + + I +S
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 381 KMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVS 440
+ + DE+ ++ L ++ + + N++ + W ++I YG
Sbjct: 438 ESRLETDEL----LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 441 NAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLL 499
A+ D M KFG+ P+ T A++ A +G I +M +K G+ P + Y+ +
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 500 I---GAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILK 556
I G A L A ++ ++ + +L+S + +C +R A++L
Sbjct: 554 IDILGRAGRLLE---AYEIIQQTPETSDNAELLS---TLFSACCLHLEHSLGDRIARLLV 607
Query: 557 SGLMNDHVPVQILFNMYCKLE 577
+D +LFN+Y E
Sbjct: 608 ENYPDDASTYMVLFNLYASGE 628
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 178/426 (41%), Gaps = 53/426 (12%)
Query: 163 LQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
+ ++V+ G++ DV + +V K L E + ++ + P ++ ++NT+I +
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENS-----LQVFDEMPERDVASWNTVISCF 183
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
+KAL L+ M +G +PN V+ + + A L+ K++ + + ++ +
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
V S + +D Y K A ++ +M + S+ VA+N +I G
Sbjct: 244 YVNSAL-VDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVA------------ 286
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
+G ++ IL M G P + + ++ R
Sbjct: 287 -----------------------KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 403 DIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
+++ K + ++ +++ V +IDLY +C + + A + + ++N
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA----ETVFSKTQKDVAESWN 379
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
+I +++ GN ++A + ++M++ G+ PDVVT+ ++ A L + + Q+ + +
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 523 GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
D + + L+ GN KEA + I K D V ++ + Y +P +A
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREA 495
Query: 583 FNLFQD 588
F +
Sbjct: 496 LYQFDE 501
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 164/391 (41%), Gaps = 60/391 (15%)
Query: 245 PNRVTCNILVHALCENGHLKE------------AKKMLEEILN--DDKDIPDLVTSTVFM 290
P+ V + L + GH+KE KK L D + PD+V +
Sbjct: 541 PDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVL 600
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
+ + +++ AF + +++Q + V Y +++ + + NL + + +M +K +
Sbjct: 601 NACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM-QKSSI 659
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
P+A Y +L+ LWKEGK+ EA + + M GIV Y + R LC R E
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLC---SAGRCNEG 716
Query: 411 LWCMLNNL--MVPKPIV--WNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
L ML + + KP+V + +I ++ NA D M K PN+ T N ++
Sbjct: 717 L-NMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLK 774
Query: 467 AHVKSGNIYRAYSLKEEMLTKG------------LFPDVVTYNLLIGAACNLRSHDFALQ 514
A+++ G A L ++M G + PD T+N ++ D
Sbjct: 775 AYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGY 834
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAE-------------------ERYAKIL 555
REM++ G+ + + +V E+ G + E ER+ + L
Sbjct: 835 AYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKL 894
Query: 556 KSGLMNDHVP-VQILFNMYCKLEE-PVKAFN 584
+ G DH+ + L ++ K+EE ++AF+
Sbjct: 895 EKG---DHISAISSLADLNGKIEETELRAFS 922
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 148 VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFG 207
V L EGK + A+ M +G + + + LC G + + +++++
Sbjct: 669 VNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLN-MLKKICRVA 727
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAK 267
P +VTY LI+ ++ A Y++ M PN VTCNI++ A + G +EA+
Sbjct: 728 NKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEAR 786
Query: 268 KMLEEILNDDKDIPDL--VTSTVFMDHY 293
++ +++ D I + S V D Y
Sbjct: 787 ELFQKMSEDGNHIKNSSDFESRVLPDTY 814
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 197/461 (42%), Gaps = 75/461 (16%)
Query: 180 NHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMA 239
N +N + + G + +A D + E LE N VT+NT+I GY +++A L+ M
Sbjct: 44 NKELNQMIRSGYIAEARD--IFEKLE---ARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 240 DTGIQPNRVTCNILVHALCENG---HLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
+ VT N ++ G L+EA+K+ +E+ + D + + Y KN
Sbjct: 99 KRDV----VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS-----FSWNTMISGYAKN 149
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
R +A L+ +M E + V+++ +I G C+N ++ A + +K + D+
Sbjct: 150 RRIGEALLLFEKMP----ERNAVSWSAMITGFCQNGEVD----SAVVLFRKMPVKDSSPL 201
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEI--SYKVMIRGLCFDRDIVRAKELLWCM 414
L+ L K + EA ++LG + +++ +Y +I G R V A L+
Sbjct: 202 CALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYG-QRGQVEAARCLFDQ 260
Query: 415 LNNL------------MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
+ +L + WN +I Y + DV +A L D M + ++N
Sbjct: 261 IPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWN 316
Query: 463 ALILAHVKSGNIYRAYSLKEEM----------------------LTKGLF---PD--VVT 495
+I +V + A++L EM L + F P+ V+
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 496 YNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKIL 555
+N +I A + + A+ L M +G +PD + T L+ S N + + + ++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 556 KSGLMNDHVPVQ-ILFNMYCKLEEPVKAFNLFQDWLESKRD 595
K+ + + VPV L MY + E +++ +F D ++ KR+
Sbjct: 437 KTVIPD--VPVHNALITMYSRCGEIMESRRIF-DEMKLKRE 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 180/420 (42%), Gaps = 42/420 (10%)
Query: 145 AATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREML 204
+A + C G++++A+ L R M K P +V GL K + +A W+ +
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLC----ALVAGLIKNERLSEAA-WV---LG 222
Query: 205 EFGPLPN-----LVTYNTLIKGYCTVNSVDKALYLYSSMAD-----------TGIQPNRV 248
++G L + + YNTLI GY V+ A L+ + D N V
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 249 TCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNE 308
+ N ++ A + G + A+ + +++ KD D ++ +D Y AF+L++E
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQM----KD-RDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 309 MRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGK 368
M D ++N++++G + LA Y +K ++N +I A K
Sbjct: 338 MPNR----DAHSWNMMVSGYASVGNVELARHY----FEKTPEKHTVSWNSIIAAYEKNKD 389
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
+EA + M+ G PD + ++ ++ ++ ++ + +P V N
Sbjct: 390 YKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV-IPDVPVHNA 448
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
+I +Y RC ++ + +R + + + V T+NA+I + GN A +L M + G
Sbjct: 449 LITMYSRCGEI---MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 489 LFPDVVTYNLLIGAACNLRSHDFA-LQLRREMVQKGHRPDLISYTELVRESCIRGNTKEA 547
++P +T+ ++ A + D A Q M P + Y+ LV + +G +EA
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 153/368 (41%), Gaps = 61/368 (16%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVN--GLCKVGLMEKAHDWLVREMLEFGPLP-- 210
G++ + ++++ GF DV V+ G CK L FG +P
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD---------LFSARKVFGEMPER 174
Query: 211 NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKML 270
N V++ L+ Y +++A SM D + N + N LV L ++G L AKK+
Sbjct: 175 NAVSWTALVVAYVKSGELEEA----KSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLF 230
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
+E+ D +++ T +D Y K + + A L+ E R VDV A++ LI G +
Sbjct: 231 DEMPKRD-----IISYTSMIDGYAKGGDMVSARDLFEEARG----VDVRAWSALILGYAQ 281
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREAC-----YILGVMSKMG-- 383
N N A+ EM K V PD F L+ A + G E C Y+ M+K
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMG-CFELCEKVDSYLHQRMNKFSSH 340
Query: 384 -IVP-------------------------DEISYKVMIRGLCFDRDIVRAKELLWCMLNN 417
+VP D +SY M+ G+ A L M++
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 418 LMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML-KFGVHPNVFTYNALILAHVKSGNIYR 476
+VP + + +I+ + G+ + V + +LM K+ + + Y+ ++ ++G +
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 477 AYSLKEEM 484
AY L + M
Sbjct: 461 AYELIKSM 468
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 157/387 (40%), Gaps = 30/387 (7%)
Query: 208 PLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGI-QPNRVTCNILVHALCENGHLKEA 266
P P +N LIKGY + + + M TG+ +P+ T +++ NG ++
Sbjct: 70 PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVG 129
Query: 267 KKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLIN 326
+ +L D D+V T F+D Y K ++ A ++ EM E + V++ L+
Sbjct: 130 SSVHGLVLRIGFD-KDVVVGTSFVDFYGKCKDLFSARKVFGEMP----ERNAVSWTALVV 184
Query: 327 GLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP 386
K+ + A M ++ + ++N L+ L K G A + M K I
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNL----GSWNALVDGLVKSGDLVNAKKLFDEMPKRDI-- 238
Query: 387 DEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTR 446
ISY MI G D+V A++L W+ +I Y + + A
Sbjct: 239 --ISYTSMIDGYAKGGDMVSARDL----FEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 447 DLMLKFGVHPNVFTYNALILAHVKSGNI---YRAYSLKEEMLTKGLFPDVVTYNLLIGAA 503
M V P+ F L+ A + G + S + + K VV + + A
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 504 CNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDH 563
C D A +L EM Q+ DL+SY ++ I G EA + K++ G++ D
Sbjct: 353 CG--HMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 564 VPVQILFNMYCK---LEEPVKAFNLFQ 587
V ++ + + +EE ++ F L +
Sbjct: 407 VAFTVILKVCGQSRLVEEGLRYFELMR 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 27/244 (11%)
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIV-PDEISYKVMIRGLCFDRDIVRAKE 409
P + +N LI + E IL M + G+ PDE ++ ++++ +C + VR
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMK-VCSNNGQVRVGS 130
Query: 410 LLWCMLNNLMVPKPIVWNL-IIDLYGRCKDVSNAILTRDLMLKFGVHP--NVFTYNALIL 466
+ ++ + K +V +D YG+CKD+ +A R + FG P N ++ AL++
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSA---RKV---FGEMPERNAVSWTALVV 184
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDF--ALQLRREMVQKGH 524
A+VKSG + A S+ + M + L ++N L+ ++S D A +L EM ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNL----GSWNALVDGL--VKSGDLVNAKKLFDEMPKR-- 236
Query: 525 RPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFN 584
D+ISYT ++ G+ A + + + D L Y + +P +AF
Sbjct: 237 --DIISYTSMIDGYAKGGDMVSARD----LFEEARGVDVRAWSALILGYAQNGQPNEAFK 290
Query: 585 LFQD 588
+F +
Sbjct: 291 VFSE 294
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 172/442 (38%), Gaps = 74/442 (16%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K+ +A+ L M G P+ N ++ L + G ++KA + V E + TY
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKA--FTVFEFMRKKENVTGHTY 179
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTC-NILVH----ALCENGHLKEAKKML 270
+ ++K V + AL ++ + +P R +C +++++ +LC + + +
Sbjct: 180 SLMLKAVAEVKGCESALRMFRELER---EPKRRSCFDVVLYNTAISLCGRINNVYETERI 236
Query: 271 EEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK 330
++ D I +T ++ + + + A +++EM N + + A +I+ K
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296
Query: 331 NQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
+ +LA MLKKG+ P+ N LI +L K GK + V+ +G PDE +
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 391 YKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML 450
+ ++ L K + ++ L+ + + L
Sbjct: 357 WNALLTAL----------------------YKANRYEDVLQLFDMIRSENLCCL------ 388
Query: 451 KFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHD 510
N + YN +++ K G +A L EM GL +YNL+I A R
Sbjct: 389 ------NEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSK 442
Query: 511 FALQLRREMVQKGHRPDLISYTELVRES------------------------------CI 540
AL + M Q+ +P+ +Y LVR C+
Sbjct: 443 VALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCL 502
Query: 541 RGNTKEAEERYAKILKSGLMND 562
R K A+E Y K+ + GL D
Sbjct: 503 RREFKFAKELYVKMREMGLEPD 524
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 161/405 (39%), Gaps = 56/405 (13%)
Query: 184 NGLCKVGLMEK-AHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTG 242
N +C + L EK A D R + F N T + ++ ++ V AL L+ SM G
Sbjct: 81 NVVCGLELEEKTAGD---RNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLG 137
Query: 243 IQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQA 302
+QPN CN + L NG +++A + E + +++ T ++ + + + A
Sbjct: 138 LQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGH-TYSLMLKAVAEVKGCESA 195
Query: 303 FSLWNEMRQNSME---VDVVAYNVLINGLCKNQLMNLAYGYACE-----MLKKGVLPDAF 354
++ E+ + DVV YN I+ LC ++ N+ Y E M G +
Sbjct: 196 LRMFRELEREPKRRSCFDVVLYNTAIS-LC-GRINNV---YETERIWRVMKGDGHIGTEI 250
Query: 355 TYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCM 414
TY++L+ + G++ A + M I E + MI + A ++ M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 415 LNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKS--- 471
L M P + N +I+ G+ V ++ G P+ +T+NAL+ A K+
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 472 ---------------------------------GNIYRAYSLKEEMLTKGLFPDVVTYNL 498
G +A L EM GL +YNL
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 499 LIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGN 543
+I A R AL + M Q+ +P+ +Y LVR SCI G+
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR-SCIWGS 474
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 153/384 (39%), Gaps = 44/384 (11%)
Query: 237 SMADTGIQPNRVTCNILVHA-LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFK 295
S+ + GI+PN T L+ L NG L E +K+ +IL D ++ +F D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF-DFYLF 132
Query: 296 NREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+ AF +++EM + + + +N +I L L+ +G M+ + V P+ T
Sbjct: 133 KGDLYGAFKVFDEMPERT----IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGT 188
Query: 356 YNILIGALWKEGKT-----------------REACYI----LGVMSKMGIV--------- 385
++ ++ A + G R++ + + + S+ G V
Sbjct: 189 FSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 386 ---PDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNA 442
D S+ MI GL + A L M ++P P ++ ++ + + +
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
L+LK G + + NAL+ + GN+ A + M + D VTYN LI
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLING 363
Query: 503 ACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMND 562
+ A++L + M G PD + LV G ++ +A K G ++
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 563 HVPVQILFNMYCKLEEPVKAFNLF 586
+ L N+Y K + A + F
Sbjct: 424 NKIEGALLNLYAKCADIETALDYF 447
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 38/446 (8%)
Query: 138 EYSYTEHAAT-VRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH 196
+Y+Y T +RL G LE ++ +++ F + + + +++ K+G ++ A
Sbjct: 490 QYTYPSILKTCIRL----GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 197 DWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA 256
D L+R F ++V++ T+I GY N DKAL + M D GI+ + V V A
Sbjct: 546 DILIR----FAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 257 LCENGHLKEAKKMLEE--ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSM 314
LKE +++ + + D+P K E AF + +
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF-------EQTE 653
Query: 315 EVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACY 374
D +A+N L++G ++ A M ++G+ + FT+ + A + ++
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 375 ILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA-KELLWCMLNNLMVPKPIVWNLIIDLY 433
+ V++K G + +I I A K+ L N + WN II+ Y
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN-----EVSWNAIINAY 768
Query: 434 GRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPD 492
+ S A+ + D M+ V PN T ++ A G + + + E M ++ GL P
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 493 ----VVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
V ++L A R+ +F +EM K PD + + L+ +C+ E
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFI----QEMPIK---PDALVWRTLL-SACVVHKNMEIG 880
Query: 549 ERYAKILKSGLMNDHVPVQILFNMYC 574
E A L D +L N+Y
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYA 906
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 206/484 (42%), Gaps = 44/484 (9%)
Query: 113 GSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGF 172
GSL+ + + I +K+GL C +E L +G L A ++ M ++
Sbjct: 99 GSLDEGRKLHSQI--LKLGLDSNGC---LSEKLFDFYLF--KGDLYGAFKVFDEMPER-- 149
Query: 173 LPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV--DK 230
+FT N ++ L L+ + VR M+ PN T++ +++ C SV D
Sbjct: 150 --TIFTWNKMIKELASRNLIGEVFGLFVR-MVSENVTPNEGTFSGVLEA-CRGGSVAFDV 205
Query: 231 ALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFM 290
+++ + G++ + V CN L+ NG + A+++ D + D + +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF-----DGLRLKDHSSWVAMI 260
Query: 291 DHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVL 350
KN +A L+ +M + A++ +++ K + + + +LK G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKEL 410
D + N L+ + G A +I MS+ D ++Y +I GL +A EL
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMEL 376
Query: 411 LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLML-----KFGVHPNVFTYNALI 465
M + + P N + L C ++ L R L K G N AL+
Sbjct: 377 FKRMHLDGLEPDS---NTLASLVVACS--ADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 466 LAHVKSGNIYRA--YSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKG 523
+ K +I A Y L+ E+ +VV +N+++ A L + ++ R+M +
Sbjct: 432 NLYAKCADIETALDYFLETEV------ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 524 HRPDLISYTELVRESCIR-GNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKA 582
P+ +Y +++ +CIR G+ + E+ +++I+K+ + +L +MY KL + A
Sbjct: 486 IVPNQYTYPSILK-TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 583 FNLF 586
+++
Sbjct: 545 WDIL 548
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 187/483 (38%), Gaps = 45/483 (9%)
Query: 135 YACEYSYTEHAATVRLLCL-EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
+ + S A +R LC L +I L + + D T N +V CK G
Sbjct: 557 WGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSR 616
Query: 194 KAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNIL 253
+ + + P+ N VTY +LI+ +C +++ L ++ + + P+ C L
Sbjct: 617 HSKLIFHKMVQMHHPIDN-VTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDL 675
Query: 254 VHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
+ L G ++E ++ E + + +F++ A S+ +
Sbjct: 676 WNCLVRKGLVEEVVQLFERVF-ISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEG 734
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPD--------------------- 352
V+ YN LI GLC + + A+ EML K +P
Sbjct: 735 CIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAF 794
Query: 353 --------AFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDI 404
++ + LI L GK +A L +M G+ Y VM +G C +
Sbjct: 795 NLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNW 854
Query: 405 VRAKELLWCMLNNLMVPKPIVWNL------IIDLYGRCKDVSNAILTRDLMLKFGVHPNV 458
++ +E+L LMV K I+ ++ + + + +S L L+L V
Sbjct: 855 MKVEEVL-----GLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGV 909
Query: 459 FTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRRE 518
YN LI ++ N + EM +G+ PD T+N L+ + + +L+
Sbjct: 910 IIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSA 969
Query: 519 MVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSG--LMNDHVPVQILFNMYCKL 576
M+ KG +P+ S + C G+ K+A + + + G L + V +I+ + K
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 577 EEP 579
E P
Sbjct: 1030 EIP 1032
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 162/358 (45%), Gaps = 8/358 (2%)
Query: 140 SYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPD-VFTHNHIVNGLCKVGLMEKAHDW 198
SY E+ VR +CLE + +AI L+ ++ P V +N ++ + + + +
Sbjct: 875 SYREY---VRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKV 931
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
L+ EM G LP+ T+N L+ GY + +L S+M G++PN + + +LC
Sbjct: 932 LL-EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLC 990
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
+NG +K+A + + + + ++ V T ++ E +A + +N M
Sbjct: 991 DNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP- 1049
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGV 378
Y+ +I L +++A MLK +P + +Y+ +I L + + +A
Sbjct: 1050 -NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 379 MSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKD 438
M ++G+ P ++ ++ C ++ ++ L+ M+ P ++ +ID + K+
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKN 1168
Query: 439 VSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
A ++M K G + T+ +LI +++ S + + E L++ L + T+
Sbjct: 1169 TVKASEMMEMMQKCGYEVDFETHWSLI-SNMSSSKEKKTTTAGEGFLSRLLSGNGFTW 1225
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 194/476 (40%), Gaps = 46/476 (9%)
Query: 160 AIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAH----DWLVREMLEFGPLPNLVTY 215
A+ L M +KG +P + +++ L +V E A+ DW V E + N+ +
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDW-VETRAELNHM-NIDSI 259
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILN 275
+I+ C V +A L + G N + + E ++ + E+
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV-- 317
Query: 276 DDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMN 335
K PD+ + + +A+ E+ + D V + +LI C +
Sbjct: 318 --KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIK 375
Query: 336 LAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI 395
A Y E++ KG PD ++YN ++ L+++G + IL M + G++ ++K+M+
Sbjct: 376 RAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMV 435
Query: 396 RGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYG---------RCKDVSNAILTR 446
G C R AK ++ M ++ V + + + + R K +++ ++
Sbjct: 436 TGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSK 495
Query: 447 -----DLMLKFGVHPNVFTY----------------NALILAHVKSGNIYRAYSLKEEML 485
DL +H ++ Y N+LI+ + G++ A L +EM
Sbjct: 496 AEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMA 555
Query: 486 TKGLFPDVVTYNLLIGAACNLRSH-DFALQLRREMVQKGHRPDLISYTELVRESCIRGNT 544
G ++ +L+ + C R+H ++ L + + ++ D + LV+E C +G +
Sbjct: 556 RWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFS 615
Query: 545 KEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLF-----QDWLESKRD 595
+ ++ + K+++ D+V L +CK E N++ +WL D
Sbjct: 616 RHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLND 671
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 195/498 (39%), Gaps = 90/498 (18%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPN 211
C EG ++ A+ ++ KG+ PDV+++N I++GL + GL + H ++ EM E G + +
Sbjct: 369 CYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTH-CILDEMKENGMMLS 427
Query: 212 LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC------------- 258
L T+ ++ GYC ++A + + M G+ + L A
Sbjct: 428 LSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKR 487
Query: 259 ENGHLKEAKKMLEEILN-------------------DDKDIPDLVTSTVFMDHYFKNREF 299
+N + +++ N D +P+ + V ++ +
Sbjct: 488 DNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIV---RASEDGDL 544
Query: 300 IQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL-MNLAYGYACEMLKKGVLPDAFTYNI 358
A L +EM + ++ ++ VL+ LC ++ + ++ + K D T N
Sbjct: 545 QTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNF 604
Query: 359 LIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNL 418
L+ K+G +R + I M +M D ++Y +IR C KE L +LN
Sbjct: 605 LVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFC-------KKETLNDLLNVW 657
Query: 419 MVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLK-FGVHPNVFTYNALILAHVKSGNIYR- 476
+ W + DL C D+ N ++ + L+ + + VF + L+ ++ I+
Sbjct: 658 GAAQNDNW--LPDL-NDCGDLWNCLVRKGLVEEVVQLFERVFI--SYPLSQSEACRIFVE 712
Query: 477 ----------AYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
A+S+ + + +G + YN LI C + A + EM+ K H P
Sbjct: 713 KLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIP 772
Query: 527 DLISYTELVRESC-----------------------------IRGNTKEAEERYAKILKS 557
L S L+ C + G +AE + +L +
Sbjct: 773 SLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSN 832
Query: 558 GLMNDHVPVQILFNMYCK 575
GL + + ++F YCK
Sbjct: 833 GLSSYNKIYNVMFQGYCK 850
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 172/476 (36%), Gaps = 86/476 (18%)
Query: 132 LRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDV--------------- 176
L G C + ++ LC E K AA + M+ K +P +
Sbjct: 730 LEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANK 789
Query: 177 --------------FTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGY 222
+ H ++ GL G M A + L R ML G YN + +GY
Sbjct: 790 AGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQL-RIMLSNGLSSYNKIYNVMFQGY 848
Query: 223 CTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPD 282
C N+ K + M I + + V +C A + E +L + +
Sbjct: 849 CKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGG 908
Query: 283 LVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYAC 342
++ + + + F+ + N +EV+ V
Sbjct: 909 VIIYNMLIFYMFRAK--------------NHLEVNKVL---------------------L 933
Query: 343 EMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDR 402
EM +GVLPD T+N L+ + L M G+ P+ S + + LC +
Sbjct: 934 EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993
Query: 403 DIVRAKELLWCM------LNNLMVPKPIVWNLIIDLYGRCKDVSNAI--LTRDLMLKFGV 454
D+ +A +L M L + +V IV LI G + + +TR+ M+
Sbjct: 994 DVKKALDLWQVMESKGWNLGSSVVQTKIVETLISK--GEIPKAEDFLTRVTRNGMMA--- 1048
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
PN Y+ +I GN+ A L ML P +Y+ +I D A+
Sbjct: 1049 -PN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMD 1104
Query: 515 LRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILF 570
EMV+ G P + +++ LV + C E+E +++KS + P Q +F
Sbjct: 1105 FHTEMVELGLSPSISTWSGLVHKFCEACQVLESE----RLIKSMVGLGESPSQEMF 1156
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 175/428 (40%), Gaps = 28/428 (6%)
Query: 144 HAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREM 203
+ + +R C + L + + +LPD+ + N L + GL+E+ R
Sbjct: 637 YTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVF 696
Query: 204 LEFGPLPN------LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHAL 257
+ + PL V T++ C +SV K L G + N L+ L
Sbjct: 697 ISY-PLSQSEACRIFVEKLTVLGFSCIAHSVVKRL------EGEGCIVEQEVYNHLIKGL 749
Query: 258 CENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVD 317
C A +L+E+L D K IP L + + + + + AF+L ++ +
Sbjct: 750 CTEKKDSAAFAILDEML-DKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS----- 803
Query: 318 VVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+ LI GL M A ML G+ YN++ K + +LG
Sbjct: 804 -YVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLG 862
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP-IVWNLIIDLYGRC 436
+M + I+ SY+ +R +C + + A L +L P I++N++I R
Sbjct: 863 LMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRA 922
Query: 437 K---DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDV 493
K +V+ +L M GV P+ T+N L+ + S + + M++KG+ P+
Sbjct: 923 KNHLEVNKVLLE---MQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 494 VTYNLLIGAACNLRSHDFALQLRREMVQKG-HRPDLISYTELVRESCIRGNTKEAEERYA 552
+ + + C+ AL L + M KG + + T++V +G +AE+
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLT 1039
Query: 553 KILKSGLM 560
++ ++G+M
Sbjct: 1040 RVTRNGMM 1047
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 143/356 (40%), Gaps = 53/356 (14%)
Query: 232 LYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMD 291
++ ++S+ G + C I+ L G +KE + +L E+ ++ +V +F D
Sbjct: 132 IFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEM---ERHGDTMVNEGIFCD 188
Query: 292 ---HYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKG 348
Y + + +A L++ MR+ + Y +LI+ L + AY +
Sbjct: 189 LIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLD----- 243
Query: 349 VLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAK 408
W E + ++ M I D I +I LC D+ + A+
Sbjct: 244 ---------------WVETRAE--------LNHMNI--DSIGK--VIELLCLDQKVQEAR 276
Query: 409 EL------LWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYN 462
L L C+LN+ + K + Y +D + + + + P+VF N
Sbjct: 277 VLARKLVALGCILNSSIYSKITIG------YNEKQDFEDLL---SFIGEVKYEPDVFVGN 327
Query: 463 ALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQK 522
++ + + RAY EE+ G D VT+ +LIG C A+ E++ K
Sbjct: 328 RILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSK 387
Query: 523 GHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEE 578
G++PD+ SY ++ +G + ++ ++G+M +I+ YCK +
Sbjct: 388 GYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQ 443
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 24/330 (7%)
Query: 157 LEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYN 216
E ++ + + G+ DV+ N ++N G + AH + + P P+ V++N
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAH-----LLFDRIPEPDDVSWN 185
Query: 217 TLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND 276
++IKGY +D AL L+ MA + N ++ ++ + KEA ++ E+ N
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 277 DKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNL 336
D + PD V+ + + Q + + + + + +D V VLI+ K M
Sbjct: 242 DVE-PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 337 AYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIR 396
A + KK V + LI G REA M KMGI P+ I++ ++
Sbjct: 301 ALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIV--WNLIIDLYGRCKDVSNAILTRDLMLKFGV 454
+ + K + + M + + KP + + I+DL GR + A + + + +
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNL-KPTIEHYGCIVDLLGRAGLLDEA---KRFIQEMPL 412
Query: 455 HPNVFTYNALILAHVKSGNIYRAYSLKEEM 484
PN + AL+ K+ I++ L EE+
Sbjct: 413 KPNAVIWGALL----KACRIHKNIELGEEI 438
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 151/372 (40%), Gaps = 24/372 (6%)
Query: 136 ACEYSYTEHAATVRLLCLE--GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLME 193
+C +S EH + CL+ K E ++ M++ G + D + + +
Sbjct: 5 SCSFSL-EHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYA----ITKFLSFCISS 59
Query: 194 KAHDWLVREMLEFGPL--PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCN 251
+ D+L + F P+ +N +I+G+ + +++L LY M + N T
Sbjct: 60 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 252 ILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQ 311
L+ A +E ++ +I + D+ ++ Y F A L++ +
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIP- 177
Query: 312 NSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTRE 371
E D V++N +I G K M++A + +K +A ++ +I + +E
Sbjct: 178 ---EPDDVSWNSVIKGYVKAGKMDIAL----TLFRKMAEKNAISWTTMISGYVQADMNKE 230
Query: 372 ACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVP-KPIVWNLII 430
A + M + PD +S + C + + + LN + ++ ++I
Sbjct: 231 ALQLFHEMQNSDVEPDNVSLANALSA-CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 431 DLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLF 490
D+Y +C ++ A+ + K V + ALI + G+ A S EM G+
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIK 345
Query: 491 PDVVTYNLLIGA 502
P+V+T+ ++ A
Sbjct: 346 PNVITFTAVLTA 357
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 240 DTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILND---DKDIPDLVTSTVFMDHYFKN 296
D G++ ++ + ++V LCE GH A+KM++ N+ D++I DL+ S +
Sbjct: 204 DYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAE---- 259
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCK-------NQLMNLAYGYACEMLKKGV 349
+ +A L EM + E+ AYN++++ +CK +L EM +GV
Sbjct: 260 -KLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGV 318
Query: 350 LPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
+ T+N+LI L K +T EA + G M + G PD +Y V+IR L I E
Sbjct: 319 PRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDE 378
Query: 410 LLWCMLN---NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
++ M + ++ K + + L G + + +A+ M G P + TY+ L+
Sbjct: 379 MIDKMKSAGYGELLNKKEYYGFLKILCG-IERLEHAMSVFKSMKANGCKPGIKTYDLLMG 437
Query: 467 AHVKSGNIYRAYSLKEEMLTKGL 489
+ + RA L +E KG+
Sbjct: 438 KMCANNQLTRANGLYKEAAKKGI 460
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 152 CLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKV-------GLMEKAHDWLVREML 204
C+ KL+ A RL M + GF +N +++ +CK+ L + L+ +
Sbjct: 256 CIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLE--M 313
Query: 205 EFGPLP-NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHL 263
EF +P N T+N LI C + ++A+ L+ M + G QP+ T +L+ +L + +
Sbjct: 314 EFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARI 373
Query: 264 KEAKKMLE--------EILNDDK--DIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNS 313
E +M++ E+LN + ++ ++H A S++ M+ N
Sbjct: 374 GEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEH---------AMSVFKSMKANG 424
Query: 314 MEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNI 358
+ + Y++L+ +C N + A G E KKG+ Y +
Sbjct: 425 CKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 154/350 (44%), Gaps = 20/350 (5%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G LE I + + ++ G D + +V ++G ME A +++ + P+ N V
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESA-----QKVFDEIPVRNSVL 177
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLE--E 272
+ L+KGY + + L+ M DTG+ + +T LV A C N + K +
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA-CGNVFAGKVGKCVHGVS 236
Query: 273 ILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQ 332
I D D + +++ +D Y K R A L+ + S++ +VV + LI+G K +
Sbjct: 237 IRRSFIDQSDYLQASI-IDMYVKCRLLDNARKLF----ETSVDRNVVMWTTLISGFAKCE 291
Query: 333 LMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYK 392
A+ +ML++ +LP+ T ++ + G R + G M + GI D +++
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT 351
Query: 393 VMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIV-WNLIIDLYGRCKDVSNAILTRDLMLK 451
I +I A+ + ++M + ++ W+ +I+ +G A+ M
Sbjct: 352 SFIDMYARCGNIQMARTVF-----DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Query: 452 FGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTK-GLFPDVVTYNLLI 500
V PN T+ +L+ A SGN+ + E M G+ P+ Y ++
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 37/253 (14%)
Query: 155 GKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVT 214
G++E ++ + MV+ GF PD +++H++ GL + G + + + + + G +P+
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE-IFDNIKHKGNVPDANV 327
Query: 215 YNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEIL 274
YN +I + + D+++ Y M D +PN T + LV L + + +A ++ EE+L
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 387
Query: 275 NDDKDIPDLVTSTVFMDH-------------YFKNRE------------FIQAFS----- 304
+ +P T F+ Y K+R+ ++ S
Sbjct: 388 SRGV-LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKC 446
Query: 305 -----LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNIL 359
+W+EM+++ DV Y +++GLC + A E ++KG P+ F Y+ L
Sbjct: 447 GMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Query: 360 IGALWKEGKTREA 372
L KT A
Sbjct: 507 SSKLMASNKTELA 519
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 8/278 (2%)
Query: 207 GPLP-NLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKE 265
G +P + +YN +I G+ + V++ + M ++G P+ ++ + L+ L G + +
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 266 AKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLI 325
+ ++ + I ++PD + ++ R+F ++ + M E ++ Y+ L+
Sbjct: 309 SVEIFDNI-KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 326 NGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIV 385
+GL K + ++ A EML +GVLP + L G A I K G
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 386 PDEISYKVMIRGLCFDRDIVRAKELL--WCMLNNLMVPKPI-VWNLIIDLYGRCKDVSNA 442
E +YK++++ L + LL W + P + V+ I+D + NA
Sbjct: 428 ISESAYKLLLKRLS---RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Query: 443 ILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
+L + ++ G PN F Y+ L + S AY L
Sbjct: 485 VLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 7/391 (1%)
Query: 169 QKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSV 228
+ G DV +++ I+ L + L D +++ M+ G P+L + + V+ V
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMD-VLKGMVCEGVNPDLECLTIAMDSFVRVHYV 202
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDK-DIP-DLVTS 286
+A+ L+ G++ + + N L+ LCE H+ AK + N K +IP D +
Sbjct: 203 RRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKS----VFNAKKGNIPFDSCSY 258
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ + + K E + + EM ++ D ++Y+ LI GL + +N + +
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
KG +PDA YN +I E+ M P+ +Y ++ GL R +
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALIL 466
A E+ ML+ ++P + + A++ K G + Y L+
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 467 AHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRP 526
+ G ++ +EM G DV Y ++ C + + A+ + E ++KG P
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Query: 527 DLISYTELVRESCIRGNTKEAEERYAKILKS 557
+ Y+ L + T+ A + + KI K+
Sbjct: 499 NRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 127/295 (43%), Gaps = 12/295 (4%)
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQL----MNLAYGYACEMLKKGVLPDA 353
E + F W +R+ + DV +Y+V++ L + +L M++ G CE GV PD
Sbjct: 132 EAMVTFFDW-AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCE----GVNPDL 186
Query: 354 FTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWC 413
I + + + R A + G+ S+ ++R LC + AK +
Sbjct: 187 ECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA 246
Query: 414 MLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGN 473
N+ +N++I + + +V M++ G P+ +Y+ LI ++G
Sbjct: 247 KKGNIPF-DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGR 305
Query: 474 IYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTE 533
I + + + + KG PD YN +I + R D +++ R M+ + P+L +Y++
Sbjct: 306 INDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSK 365
Query: 534 LVRESCIRG-NTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQ 587
LV I+G +A E + ++L G++ V C P A ++Q
Sbjct: 366 LV-SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 122/313 (38%), Gaps = 38/313 (12%)
Query: 281 PDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGY 340
PDL T+ MD + + +A L+ E ++ ++N L+ LC+ ++ A
Sbjct: 184 PDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKS- 242
Query: 341 ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVP-DEISYKVMIRGLC 399
+N +K G +P D SY +MI G
Sbjct: 243 --------------VFN----------------------AKKGNIPFDSCSYNIMISGWS 266
Query: 400 FDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVF 459
++ +++L M+ + P + ++ +I+ GR +++++ D + G P+
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 460 TYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREM 519
YNA+I + + + + ML + P++ TY+ L+ R AL++ EM
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 520 VQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEP 579
+ +G P T ++ C G A Y K K+G ++L + +
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKC 446
Query: 580 VKAFNLFQDWLES 592
N++ + ES
Sbjct: 447 GMLLNVWDEMQES 459
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 52/345 (15%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHA------------- 256
PN+ YN L KG+ T + ++L LY M + P+ T + LV A
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 257 --------------------LCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKN 296
G ++EA+K+ +E+ D + T + Y +
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDD-----IAWTTMVSAYRRV 948
Query: 297 REFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY 356
+ A SL N+M E + N LING L NL A + + + D ++
Sbjct: 949 LDMDSANSLANQMS----EKNEATSNCLINGYMG--LGNLE--QAESLFNQMPVKDIISW 1000
Query: 357 NILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLN 416
+I + + REA + M + GI+PDE++ +I + KE+ L
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 417 NLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGV-HPNVFTYNALILAHVKSGNIY 475
N V + + ++D+Y +C L R L++ F + N+F +N++I G
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGS-----LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
A + +M + + P+ VT+ + A + D ++ R M+
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 178 THNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSS 237
T N ++NG +G +E+A L +M P+ +++++ T+IKGY +A+ ++
Sbjct: 968 TSNCLINGYMGLGNLEQAES-LFNQM----PVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 238 MADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNR 297
M + GI P+ VT + ++ A G L+ K++ L + + D+ + +D Y K
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-VLDVYIGSALVDMYSKCG 1081
Query: 298 EFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK-------KGVL 350
+A ++ + + ++ +N +I GL A+G+A E LK + V
Sbjct: 1082 SLERALLVFFNLPKK----NLFCWNSIIEGLA-------AHGFAQEALKMFAKMEMESVK 1130
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVM-SKMGIVPDEISYKVMIRGLCFDRDIVRAKE 409
P+A T+ + A G E I M IV + Y M+ I A E
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Query: 410 LLWCMLNNLMVPKPIVWNLIID 431
L+ M P ++W ++D
Sbjct: 1191 LIGNM---EFEPNAVIWGALLD 1209
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 63/351 (17%)
Query: 72 LMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKI- 130
++SA R ++S + + MS +E + + N M G+LE+ + + + + I
Sbjct: 941 MVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGY--MGLGNLEQAESLFNQMPVKDII 998
Query: 131 ----GLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIM------------------- 167
++GY+ Y E A + EG + + + ++
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 168 VQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP--NLVTYNTLIKGYCTV 225
+Q GF+ DV+ + +V+ K G +E+A +L F LP NL +N++I+G
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSKCGSLERA-------LLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 226 NSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVT 285
+AL +++ M ++PN VT + A G + E +++ ++ DD I V
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI-DDYSIVSNVE 1170
Query: 286 STVFMDHYFKNREFI-QAFSLWNEMRQNSMEVDVVAYNVLING-----------LCKNQL 333
M H F I +A L M E + V + L++G + N+L
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNME---FEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Query: 334 MNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGI 384
M L E + G Y +L+ ++ + R+ I G M ++GI
Sbjct: 1228 MVL------EPMNSGY------YFLLVSMYAEQNRWRDVAEIRGRMRELGI 1266
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 4/311 (1%)
Query: 251 NILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMR 310
N ++ +NG E ++ E + N++ I D T T+ + + + + A ++ M
Sbjct: 143 NSMIMVYSDNGKFSEVVEVFEYMKNNEVKI-DEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 311 QNSMEV-DVVAYNVLINGLCKNQLMNLAYGYACEM-LKKGVLPDAFTYNILIGALWKEGK 368
++ ++V V + V++ LC N + A EM L KGV + T+ +IG K
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 369 TREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNL 428
E +L +M K ++ D SYKV+I G + A+ L+ M + + + ++NL
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 429 IIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKG 488
I++ Y R V I M GV PN TY L+ K+G + A S E+
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 489 LFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAE 548
D Y+ L + D +L++ EM++ G P + E + +S N KEA+
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPG-ATICERLADSLFEVNRKEAQ 440
Query: 549 ERYAKILKSGL 559
++K G+
Sbjct: 441 MLITIVVKCGI 451
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 165 RIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCT 224
++M ++ + D+ ++ +++G G +E+A + LV M + YN ++ GY
Sbjct: 270 KLMEKESVMLDLDSYKVLIDGFTSYGKVEEA-ERLVLMMHDKKLRVESYLYNLIMNGYSR 328
Query: 225 VNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLV 284
V+K + LYS M+ G+ PN+ T +L++ LC+ G + E
Sbjct: 329 FGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCE------------------- 369
Query: 285 TSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEM 344
A S NE+R N E+D Y+ L + +++ + EM
Sbjct: 370 -----------------AMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEM 412
Query: 345 LKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEIS 390
++ G +P A L +L+ E +EA ++ ++ K GI P S
Sbjct: 413 IRDGFIPGATICERLADSLF-EVNRKEAQMLITIVVKCGIKPKSCS 457
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 168/394 (42%), Gaps = 54/394 (13%)
Query: 182 IVNGLCKVGLMEKAHDW-LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMAD 240
I++ L +V + A D R +L T+N L +GY + +S +++++YS M
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 241 TGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFI 300
GI+PN++T L+ A L +++ E+L D D+ + Y ++
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF-DVYVGNNLIHLYGTCKKTS 165
Query: 301 QAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILI 360
A +++EM E +VV++N ++ L +N +NL + CEM+ K PD T +L+
Sbjct: 166 DARKVFDEM----TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL 221
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
A G +G + + +VM+R L + C L +V
Sbjct: 222 SA-------------CGGNLSLGKL---VHSQVMVRELELN-----------CRLGTALV 254
Query: 421 PKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSL 480
D+Y + + A L + M V NV+T++A+I+ + G A L
Sbjct: 255 ----------DMYAKSGGLEYARLVFERM----VDKNVWTWSAMIVGLAQYGFAEEALQL 300
Query: 481 KEEMLTK-GLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGH--RPDLISYTELVRE 537
+M+ + + P+ VT+ ++ A + D + EM +K H +P +I Y +V
Sbjct: 301 FSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM-EKIHKIKPMMIHYGAMVD- 358
Query: 538 SCIRGNTKEAEERYAKILKSGLMNDHVPVQILFN 571
I G E Y I K D V + L +
Sbjct: 359 --ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLS 390
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 297 REFIQAFSLWNEM-RQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFT 355
+++ +A ++ EM + +E D+ YN +I C++ + +Y EM +KG+ P++ +
Sbjct: 165 KDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSS 224
Query: 356 YNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCML 415
+ ++I + E K+ E +L +M G+ +Y + I+ LC + AK LL ML
Sbjct: 225 FGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGML 284
Query: 416 NNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIY 475
+ M P + ++ +I + D A +M+ G P+ Y LI K G+
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
Query: 476 RAYSLKEEMLTKGLFPDVVTYNLLI 500
A SL +E + K P L+
Sbjct: 345 TALSLCKESMEKNWVPSFSIMKSLV 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 46/308 (14%)
Query: 246 NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDH----YFKNREFIQ 301
+R+ + V L E H +L+ + + PDL S F H Y +
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENR---PDL-KSERFAAHAIVLYAQANMLDH 134
Query: 302 AFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK-GVLPDAFTYNILI 360
+ ++ ++ + + V + N L+ + A EM K G+ PD TYN +I
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 361 GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMV 420
+ G + I+ M + GI P+ S+ +MI G
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF---------------------- 232
Query: 421 PKPIVWNLIIDLYGRCK-DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYS 479
Y K D +L +M GV+ V TYN I + K A +
Sbjct: 233 ------------YAEDKSDEVGKVLA--MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKA 278
Query: 480 LKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESC 539
L + ML+ G+ P+ VTY+ LI CN + A +L + MV +G +PD Y L+ C
Sbjct: 279 LLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC 338
Query: 540 IRGNTKEA 547
G+ + A
Sbjct: 339 KGGDFETA 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 11/200 (5%)
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
M +KG P+ + +++G ++ L M + G + TYN I+ C
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM-MKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+A L M G++PN VT + L+H C +EAKK+ + ++N PD
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK-PDSECY 330
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ + K +F A SL E + + L+NGL K+ + A E++
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK----ELI- 385
Query: 347 KGVLPDAFTYNILIGALWKE 366
G + + FT N+ LW E
Sbjct: 386 -GQVKEKFTRNV---ELWNE 401
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 154 EGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLV 213
E K + ++ +M +G V T+N + LCK ++A L+ ML G PN V
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAK-ALLDGMLSAGMKPNTV 293
Query: 214 TYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEE 272
TY+ LI G+C + ++A L+ M + G +P+ L++ LC+ G + A + +E
Sbjct: 294 TYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKE 352
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 137/339 (40%), Gaps = 46/339 (13%)
Query: 199 LVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALC 258
R++ + P P + +N +I+GY N AL +YS+M + P+ T L+ A
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 259 ENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDV 318
HL+ + V + VF + + DV
Sbjct: 131 GLSHLQMGR---------------FVHAQVF---------------------RLGFDADV 154
Query: 319 VAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDA--FTYNILIGALWKEGKTREACYIL 376
N LI K + + G A + + LP+ ++ ++ A + G+ EA I
Sbjct: 155 FVQNGLIALYAKCRRL----GSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 377 GVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRC 436
M KM + PD ++ ++ +D+ + + + ++ + +P + + +Y +C
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 437 KDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTY 496
V+ A + D M PN+ +NA+I + K+G A + EM+ K + PD ++
Sbjct: 271 GQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 497 NLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
I A + S + A + + + +R D+ + L+
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 136/344 (39%), Gaps = 40/344 (11%)
Query: 171 GFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLP--NLVTYNTLIKGYCTVNSV 228
GF DVF N ++ K + A R + E PLP +V++ ++ Y
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSA-----RTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 229 DKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDI-PDLVTST 287
+AL ++S M ++P+ V +++A LK+ + + ++ +I PDL+ S
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKK 347
M Y K + A L+++M+ ++ + +N +I+G KN A EM+ K
Sbjct: 264 NTM--YAKCGQVATAKILFDKMKSPNL----ILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 348 GVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMI-----------R 396
V PD + I A + G +A + + + D +I
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 397 GLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHP 456
L FDR + R +VW+ +I YG AI M + GVHP
Sbjct: 378 RLVFDRTLDR---------------DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 457 NVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLI 500
N T+ L++A SG + + M + P Y +I
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVI 466
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
PNL+ +N +I GY +A+ ++ M + ++P+ ++ + A + G L++A+ M
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 270 LEEILNDD-KDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGL 328
E + D +D D+ S+ +D + K A +++ +++ DVV ++ +I G
Sbjct: 346 YEYVGRSDYRD--DVFISSALIDMFAKCGSVEGARLVFDR----TLDRDVVVWSAMIVGY 399
Query: 329 CKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDE 388
+ A M + GV P+ T+ L+ A G RE + M+ I P +
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQ 459
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLII 430
Y +I L + +A E++ CM + P VW ++
Sbjct: 460 QHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALL 498
>AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11286756-11288513 REVERSE
LENGTH=551
Length = 551
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 154/384 (40%), Gaps = 80/384 (20%)
Query: 210 PNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKM 269
P+ YN+L+ N AL LYS+M GI + +T +++ LCE G K K+
Sbjct: 186 PSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKL 245
Query: 270 LEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLC 329
+E + K +LV + Y +N EF FSL +EM +E+ +Y +++ C
Sbjct: 246 METGVESCKIYTNLV------ECYSRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDAC 299
Query: 330 K--------------------------------NQLMNLAYGYACEMLKKGV-------L 350
+ +L ++ +A EML + L
Sbjct: 300 RLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRL 359
Query: 351 PDAFTYNILIGALWKEGKTREACYILGVMSKMGI-VPDEISYKVMIRGLCFDRD------ 403
D+ TY ++ AL ++ +T+EA + ++ + GI V DE Y LC D +
Sbjct: 360 WDS-TYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSEEEE 418
Query: 404 ------IVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPN 457
I R KE P LI R + A++ + + K +
Sbjct: 419 ELLVDVIKRGKE----------DGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMKGSLD 468
Query: 458 VFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVV------TYNLLIGAACNLRSHDF 511
V YNA++ + R + EE + + + ++ ++I C ++
Sbjct: 469 VNAYNAVL-----DRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKK 523
Query: 512 ALQLRREMVQKGHRPDLISYTELV 535
A++ EM++ G +PDL++Y L+
Sbjct: 524 AMRSHDEMLRLGLKPDLVTYKRLI 547
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 158/391 (40%), Gaps = 46/391 (11%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTY 215
K+E A+R+ ++ DVF +V+G + L K EM G PN TY
Sbjct: 274 KMEDAVRVLNSSGEQ----DVFLWTSVVSGFVR-NLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 216 NTLIKGYCTVNSVDKALYLYSSMADTG--------------------------------I 243
+ ++ V S+D ++S G +
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
PN V+ L+ L ++G +++ +L E++ + + P++VT + + K R +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE-PNVVTLSGVLRACSKLRHVRRVL 447
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
+ + + ++ ++V N L++ ++ ++ A+ M ++ D TY L+
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRF 503
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKP 423
+ GK A ++ M GI D++S I + K L + +
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 424 IVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEE 483
V N ++D+Y +C + +A + + P+V ++N L+ +G I A S EE
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 484 MLTKGLFPDVVTYNLLIGAACNLRSHDFALQ 514
M K PD VT+ +L+ A N R D L+
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 148/370 (40%), Gaps = 43/370 (11%)
Query: 173 LPDVFTHNHIVNGLCKVGLMEKAHDW-----LVREMLEFGPLPNLVTYNTLIKGYCTVNS 227
L D +H + + K+ ++ L EM+ G PN T++++++ +
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 228 VDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTST 287
+ ++ S+ TG + N V + L + G KEA ++ + N D ++ T
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN-----ADTISWT 194
Query: 288 VFMDHYFKNREFIQAFSLWNEMRQ-------------------------NSMEVDVVAYN 322
+ + R++ +A ++EM + ++ +++
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRG 254
Query: 323 VLINGLCKNQLMNLAYGY-----ACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILG 377
+ +N + K L++ + A +L D F + ++ + + +EA
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 378 VMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCK 437
M +G+ P+ +Y ++ R + K++ + V N ++D+Y +C
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC- 373
Query: 438 DVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYN 497
S + + + V PNV ++ LIL V G + + L EM+ + + P+VVT +
Sbjct: 374 --SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 498 LLIGAACNLR 507
++ A LR
Sbjct: 432 GVLRACSKLR 441
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 183/498 (36%), Gaps = 85/498 (17%)
Query: 156 KLEAAIRLQRIMVQKGFLPDVFTHNHIVN---GLCKVGLMEKAHDWLVREMLE------- 205
+ +A+ L M+ G P+ FT + +V GL + + H +++ E
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 206 ------------------FGPLPN--LVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQP 245
F L N +++ +I +AL YS M G+ P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 246 NRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIP-DLVTSTVFMDHYFKNREFIQAFS 304
N T L+ A G L+ K + I+ + IP ++V T +D Y + + A
Sbjct: 224 NEFTFVKLLGASSFLG-LEFGKTIHSNIIV--RGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 305 LWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTY-------- 356
+ N +S E DV + +++G +N A G EM G+ P+ FTY
Sbjct: 281 VLN----SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 357 ---------------------------NILIGALWK-EGKTREACYILGVMSKMGIVPDE 388
N L+ K EA + G M + P+
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM----VSPNV 392
Query: 389 ISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDL 448
+S+ +I GL + LL M+ + P + + ++ + + V +
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 449 MLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRS 508
+L+ V + N+L+ A+ S + A+++ M + D +TY L+ L
Sbjct: 453 LLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGK 508
Query: 509 HDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQI 568
H+ AL + M G R D +S + S G + + + +KSG +
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568
Query: 569 LFNMYCK---LEEPVKAF 583
L +MY K LE+ K F
Sbjct: 569 LVDMYSKCGSLEDAKKVF 586
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 27/341 (7%)
Query: 244 QPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAF 303
+PN + N++V A ++ + A+++ +EI PD V+ + Y RE A
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ-----PDTVSYNTLISGYADARETFAAM 125
Query: 304 SLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGAL 363
L+ MR+ EVD + LI C ++L C + G + N +
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 364 WKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRA----KELLWCMLNNLM 419
K G REA + V M + DE+S+ MI ++ +A KE+++ M
Sbjct: 184 SKGGLLREA---VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 420 VPKPIVWNLIIDLYGRCKDVSNAILTRDL---MLKFGVHPNVFTYNALILAHVKSGNIYR 476
V N + L + I R ++K G H N + LI + K G
Sbjct: 241 FTLASVLNALTSL-------DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 477 AYSLKEEMLTKGLFPDVVTYNLLI-GAACNLRSHDFALQLRREMVQKGHRPDLISYTELV 535
Y E++ + L PD+V +N +I G + N + A++ R+M + GHRPD S+ +
Sbjct: 294 MYD-SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 536 RESCIRGNTKEAEERYAKILKSGLMNDHVPV-QILFNMYCK 575
+ + ++ + +KS + ++ + V L ++Y K
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYK 393
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 153/398 (38%), Gaps = 82/398 (20%)
Query: 174 PDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALY 233
P+VF++N IV K K H + R++ + P P+ V+YNTLI GY A+
Sbjct: 72 PNVFSYNVIVKAYAKD---SKIH--IARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 234 LYSSMADTGIQPNRVTCNILVHALCE---------------------------------N 260
L+ M G + + T + L+ A C+
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 261 GHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVA 320
G L+EA + + ++ D V+ + Y +++E +A +L+ EM ++D+
Sbjct: 187 GLLREAVSVFYGM----DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 321 YNVLINGLCKNQLMNLAYGYACEMLKKG-------------------------------- 348
++N L + + +++K G
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 349 --VLPDAFTYNILI-GALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIV 405
+ PD +N +I G E + EA M ++G PD+ S+ +
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 406 RAKELLWCMLNNLMVPKPI-VWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNAL 464
+ K++ + + + I V N +I LY + ++ +A D M + N ++N +
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL----NAVSFNCM 418
Query: 465 ILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGA 502
I + + G+ A L + ML G+ P+ +T+ ++ A
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 401 DRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFT 460
+RD+ K L + +++ + N ++LY +C +S A PNVF+
Sbjct: 21 ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYA----RAAFYSTEEPNVFS 76
Query: 461 YNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMV 520
YN ++ A+ K I+ A L +E+ PD V+YN LI + R A+ L + M
Sbjct: 77 YNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 521 QKGHRPDLISYTELVRESCIR 541
+ G D + + L+ C R
Sbjct: 133 KLGFEVDGFTLSGLIAACCDR 153
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 180/446 (40%), Gaps = 67/446 (15%)
Query: 122 RENISLVKIGLRGYACE-------------YSYTEHAAT--VRLLCLEGKLEAAIRLQRI 166
R N+S V + +GYAC+ + H T ++L K E L
Sbjct: 113 RNNVSFVTLA-QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 167 MVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVN 226
+V+ G+ + F ++N G ++ A R + E ++V + ++ Y
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSA-----RTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 227 SVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTS 286
+ +L L S M G PN T + + A G AK + +IL + D
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY-VLDPRVG 285
Query: 287 TVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLK 346
+ Y + + AF ++NEM +N DVV ++ +I C+N N A M +
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKN----DVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 347 KGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVR 406
V+P+ FT + ++ C I G S +G E + ++++ + FD DI
Sbjct: 342 AFVVPNEFTLSSIL----------NGCAI-GKCSGLG----EQLHGLVVK-VGFDLDIY- 384
Query: 407 AKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAI-LTRDLMLKFGVHPNVFTYNALI 465
V N +ID+Y +C+ + A+ L +L K N ++N +I
Sbjct: 385 ------------------VSNALIDVYAKCEKMDTAVKLFAELSSK-----NEVSWNTVI 421
Query: 466 LAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHR 525
+ + G +A+S+ E L + VT++ +GA +L S D +Q+ ++ +
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA 481
Query: 526 PDLISYTELVRESCIRGNTKEAEERY 551
+ L+ G+ K A+ +
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVF 507