Miyakogusa Predicted Gene

Lj0g3v0282799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0282799.1 tr|G3XKQ9|G3XKQ9_ORYSJ LAX PANICLE2 OS=Oryza
sativa subsp. japonica GN=LAX2 PE=2
SV=1,43.64,2e-17,seg,NULL,CUFF.18829.1
         (264 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13250.1 | Symbols:  | RING finger protein | chr5:4234486-424...    88   5e-18
AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | ch...    77   1e-14
AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...    74   1e-13
AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...    73   2e-13
AT1G28080.1 | Symbols:  | RING finger protein | chr1:9789826-979...    57   2e-08
AT3G23060.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    48   5e-06

>AT5G13250.1 | Symbols:  | RING finger protein |
           chr5:4234486-4241615 FORWARD LENGTH=387
          Length = 387

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 3/84 (3%)

Query: 150 RNPHQSGLWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEA-E 207
           R PH SG+WF L +S N++ E  LPQIPK+Y+R+ D  MTV ++ KYLV KL L  E+ +
Sbjct: 270 RRPH-SGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQ 328

Query: 208 IDISCMGQSLSHILTLKQVRDTIW 231
           ++I C GQ L  +LTL+ VRD IW
Sbjct: 329 VEIRCRGQELEPVLTLQHVRDAIW 352


>AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
           chr2:13026444-13030363 FORWARD LENGTH=420
          Length = 420

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 10/115 (8%)

Query: 150 RNPHQSGLWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEI 208
           RN H   +WF+L++S+N+ GEA LPQIP  Y+R+ D ++ V  ++KYL+RKL L  E E+
Sbjct: 306 RNGH---VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEV 362

Query: 209 DISCMGQSLSHILTLKQVRDTIWLPRLVESVNSSMPLSIGDSHDMSINHLMSLLY 263
           +I+CMG+ +   L L  + D +WL     S +  +  SIG S   +   +M L+Y
Sbjct: 363 EITCMGEPVIPTLQLHSLVD-LWLE--TTSKHQRVAASIGSS---AKEFVMVLVY 411


>AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2080658 REVERSE LENGTH=307
          Length = 307

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 136 DPQAVPCDSHHYSSRNPHQSGLWFTLLSSTNR-SGEALPQIPKAYIRVTDESMTVFMVKK 194
           D + +P      + +      +WF+L++S ++  G +LPQIP  ++R+ D + TV  ++K
Sbjct: 176 DSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQK 235

Query: 195 YLVRKLGLSDEAEIDISCMGQSLSHILTLKQVRDTIWLPR 234
           YL+RKL L  E EI+I CMG+++   LTL  + D +WL +
Sbjct: 236 YLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVD-LWLQK 274


>AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2081707 REVERSE LENGTH=421
          Length = 421

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 61/89 (68%), Gaps = 3/89 (3%)

Query: 148 SSRNPHQSG-LWFTLLSSTNRSG-EALPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDE 205
           S++   ++G +WF+L++S ++ G  +LPQIP  ++R+ D + TV  ++KYL+RKL L  E
Sbjct: 301 SAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESE 360

Query: 206 AEIDISCMGQSLSHILTLKQVRDTIWLPR 234
            EI+I CMG+++   LTL  + D +WL +
Sbjct: 361 NEIEIKCMGEAVIPTLTLYNLVD-LWLQK 388


>AT1G28080.1 | Symbols:  | RING finger protein |
           chr1:9789826-9790918 FORWARD LENGTH=291
          Length = 291

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)

Query: 150 RNPHQSGLWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEI 208
           R PH SGLWF L +S  +  E  LPQ+ K+Y+R+ D  +TV ++ KYL++KL L  E+E+
Sbjct: 231 RRPH-SGLWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEV 289

Query: 209 DI 210
           +I
Sbjct: 290 NI 291


>AT3G23060.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:8200868-8203116 FORWARD LENGTH=480
          Length = 480

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 130 PSSCQSDPQA-VPCDSHHYSSRNPHQSGLWFTLLSSTNRSGEAL-PQIPKAYIRVTDESM 187
           P++  + P+A V  +         + + +WF+L  S  ++ E L P I    IRV D +M
Sbjct: 337 PAAGTTTPEAPVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNM 396

Query: 188 TVFMVKKYLVRKLGLSDEAEIDISCMGQSLSHILTLKQVRD 228
           TV  +KKYL+ KLGL  E +++I    + +   LTL  + D
Sbjct: 397 TVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVD 437