Miyakogusa Predicted Gene
- Lj0g3v0282319.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0282319.1 tr|Q7XJ94|Q7XJ94_RAPSA Pentatricopeptide
repeat-containing protein OS=Raphanus sativus GN=Ppr.24
PE=,24.21,1e-18,HCP-like,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptid,CUFF.18810.1
(342 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 422 e-118
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 177 8e-45
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 8e-27
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 112 4e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 7e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 9e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 1e-21
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 1e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 7e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 98 8e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 9e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 97 1e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 97 2e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 5e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 9e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 9e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 8e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 9e-17
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 78 8e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 1e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 2e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 1e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 1e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 67 2e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 66 4e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 64 1e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 6e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 3e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 3e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 57 2e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 6e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 8e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 54 1e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 52 5e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 1e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 50 2e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 50 3e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 49 4e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 49 5e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 49 7e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-05
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 190/291 (65%), Positives = 232/291 (79%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
MYRAKRY+E+I+LF +FF QSNIVPN+VSYN +IN HCDEG VD ALE+YRHI+A APF
Sbjct: 190 MYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFA 249
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
PS+VTYRHLTKG + AGRI +A LLREML+KG ADS VYNNLI G+L+LG+ DKA E
Sbjct: 250 PSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEF 309
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
FDELK +C VYDG+VNAT+ME++F G DKEAM+SY+SL+D++F+M P T NVLLEV LK
Sbjct: 310 FDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLK 369
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
GKK +AWALF++MLDNH PPN +VNSDT IMVNECF +G+F EA+ TF+K G+K S
Sbjct: 370 FGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTS 429
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
K F MD GY NI++RFCE G+L+EAE F E S+SL D P+H A + A
Sbjct: 430 KPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDA 480
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 162/287 (56%), Gaps = 9/287 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R +Y A+ H F Q+ I PNI++YN + + D + ++ALE Y+ I AP PS
Sbjct: 142 RQAKYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPS 200
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+R L KG +S + +A+++ +M KG D +VY+ L+ G ++ + D +L+
Sbjct: 201 IATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQ 260
Query: 123 ELKERC--LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM--DRQFKMTPVTCNVLLEVL 178
ELKE+ V DGVV M+ +F +KEAM+ Y+ + + + +M+ + N +LE L
Sbjct: 261 ELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEAL 320
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
++GK +A LFD + H PP AVN TFN+MVN GKF EA+ FR+ G
Sbjct: 321 SENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFK 380
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
S D +NN++++ C+N LL+EAE L+ E+ K++ PD T+
Sbjct: 381 CSP----DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA-PFGPSAV- 64
Y EA+ S + + ++YN V+ + G+ D AL+L+ + P AV
Sbjct: 296 YEEAVG------ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN 349
Query: 65 --TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ + G+ + G+ EA+++ R+M + D+L +NNL++ + L +A +L+
Sbjct: 350 LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYG 409
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E++E+ + D M+ F G+ E YK++++ + N L + L+K G
Sbjct: 410 EMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Query: 183 KKTQAWALFDQML 195
K A + FD M+
Sbjct: 470 KLDDAKSFFDMMV 482
>AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22565440-22566678 REVERSE
LENGTH=412
Length = 412
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 163/290 (56%), Gaps = 28/290 (9%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R KR +A L+ FFF Q N+ PN +N +I + +G V+ AL + I +
Sbjct: 80 MLRDKRLKDAYDLYEFFFNQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVH 139
Query: 61 --PSAVTYRHLTKGFISAGRIVEALDLLR-EMLNKGHGADSLVYNNLISGFLELGNLDKA 117
PS ++R LTKG + +GR+ +A LR +N+ D + YNNLI GFL+LGN KA
Sbjct: 140 DYPSDDSFRILTKGLVHSGRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKA 199
Query: 118 NELFDELKERCLV-------------YDGVVN---ATYMEWFFNNGRDKEAMDSY-KSLM 160
N + E K L+ Y+ V AT+ME++F G+ EAM+ Y + ++
Sbjct: 200 NLVLGEFKRLFLIALSETKDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVL 259
Query: 161 DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 220
+ + T N LL+VLLK+G+K AWAL+ ++LD + ++SDT IMV+ECF+
Sbjct: 260 SNRLLVCAETGNALLKVLLKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFD 318
Query: 221 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 270
+G F EA+ T++KA K+ D II+RFCEN +LSEAE++F
Sbjct: 319 MGWFSEAMETYKKARPKN-------DYLSDKYIITRFCENRMLSEAESVF 361
>AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22535729-22536940 FORWARD
LENGTH=403
Length = 403
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 38/281 (13%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M AKRY++AI+LF++FF +S +PN +S + +I HCD+G VD ALELYRHI+
Sbjct: 98 MCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALELYRHILLDGRVA 157
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P TY L K + A R EA L R M +VY+ LI GFL++GN KA+++
Sbjct: 158 PGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFLDIGNFVKASQI 213
Query: 121 FDELKERCLVYDG--------VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 172
F+ELK G + N ++M ++F G+D+EAM+ +L D Q + P+ N
Sbjct: 214 FEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLEDAQV-LNPIVGN 272
Query: 173 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 232
+L+VL+KHGKKT+AW LF +M+ + +S+T +IM F E F
Sbjct: 273 RVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE------YFSEKTVPFE 318
Query: 233 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+ + Y +I CE+G +S+AE LF E+
Sbjct: 319 R-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEM 348
>AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10314118-10317160 FORWARD
LENGTH=435
Length = 435
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 152/275 (55%), Gaps = 35/275 (12%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
Y+EAI+LF +FF +S +PN++S N +I HCD+G VD ALELYRHI+ P TY
Sbjct: 133 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 192
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK- 125
R LTK + A R+ EA D++R M D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 193 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 248
Query: 126 -ERCLVYD------GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
L + + N ++M+++F G+D+EAM+ + +L + + ++ N +L+ L
Sbjct: 249 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVLKCL 307
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
++HG+KT+AW LF M+ + +S+T I++++ G F E F +
Sbjct: 308 VEHGRKTEAWELFLDMI--------EICDSETVGIIMSK---EGFFGEKTIPFERVRRTC 356
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
Y +I+ C+ G + EAE LF ++
Sbjct: 357 -----------YTRMIASLCQQGNMLEAEKLFADM 380
>AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10338723-10341007 REVERSE
LENGTH=390
Length = 390
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 41/299 (13%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
Y+EAI+LF +FF +S +PN++S N +I HCD+G VD ALELYRHI+ P TY
Sbjct: 88 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK- 125
R LTK + A R+ EA D++R M D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 148 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 203
Query: 126 -ERCLVYD------GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
L + + N ++M+++F G+D+EAM+ + +L + + ++ N +L+ L
Sbjct: 204 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVLKCL 262
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
++HG+KT+AW LF M+ + +S+T I++++ G F E F +
Sbjct: 263 VEHGRKTEAWELFLDMI--------EICDSETVGIIMSK---EGFFGEKTIPFERVRRTC 311
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS------LSPDVPTHFACVSA 291
Y +I+ C+ G + EAE LF ++ + PDV T A ++
Sbjct: 312 -----------YTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMING 359
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 19/295 (6%)
Query: 1 MYRAKRYNEAIALFHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP 58
+ + KR N+A F FF + I PN+V+Y ++N C+ R A L +I
Sbjct: 200 LCKTKRVNDA---FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KK 255
Query: 59 FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 118
P+ +TY L F+ G+++EA +L EM+ D + Y++LI+G +D+AN
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 119 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
++FD + + + D V T + F R ++ M ++ + R VT N L++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSD--TFNIMVNECFNLGKFHEALATFRKAGT 236
+ G +A F QM +F ++ D T+NI++ + G+ +AL F
Sbjct: 376 FQAGDVDKAQEFFSQM-------DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-- 426
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ +D+ Y +I C+ G + EA +LF L K L PD+ T+ +S
Sbjct: 427 --QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 129/285 (45%), Gaps = 11/285 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ + K+Y+ I+L I ++ ++N VIN C +V +AL + ++ +
Sbjct: 95 IVKLKKYDVVISLGKKMEVL-GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG-YE 152
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P VT L GF R+ +A+ L+ +M+ G+ D + YN +I + ++ A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F E++ + + + V + N+ R +A ++ ++ +T + LL+ +K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
+GK +A LF++M+ P+ T++ ++N + EA F S
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIV-----TYSSLINGLCLHDRIDEANQMFDLM----VS 323
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
K DV YN +I+ FC+ + + LF E+ + L + T+
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA +F ++ + ++VSYN +IN C RV+ ++L+R + + + VT
Sbjct: 310 RIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVT 367
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L +GF AG + +A + +M G D YN L+ G + G L+KA +F++++
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+R + D V T + G+ +EA + SL + K VT ++ L G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 186 QAWALFDQM 194
+ AL+ +M
Sbjct: 488 EVEALYTKM 496
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 17 FFTQSN---IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FF+Q + I P+I +YN ++ CD G ++ AL ++ + VTY + +G
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIVTYTTVIRGM 445
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER------ 127
G++ EA L + KG D + Y ++SG G L + L+ ++K+
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Query: 128 CLVYDG 133
C + DG
Sbjct: 506 CTLSDG 511
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 10/268 (3%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
++ PN V+Y V+ C G+ +A+EL R + AV Y + G G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDG 261
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ A +L EM KG AD ++Y LI GF G D +L ++ +R + D V +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++ F G+ +EA + +K ++ R VT L++ K + +A + D M+
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
PN + TFNI++N + L FRK + D YN +I F
Sbjct: 382 GCGPNIR-----TFNILINGYCKANLIDDGLELFRKMSL----RGVVADTVTYNTLIQGF 432
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTH 285
CE G L A+ LF+E+ S+ + PD+ ++
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSY 460
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 10/271 (3%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
H Q I P+ V+Y ++I+ C E ++D A + ++ + GP+ T+ L G+
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGY 397
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
A I + L+L R+M +G AD++ YN LI GF ELG L+ A ELF E+ R + D
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V ++ +NG ++A++ ++ + + ++ N+++ + K AW LF
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
+ P+ + T+NIM+ G EA FRK +S + YN +
Sbjct: 518 LPLKGVKPDVK-----TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP----NGCTYNIL 568
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
I G +++ L EE+ S D T
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 143/291 (49%), Gaps = 11/291 (3%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
A R+++ L + I P++V+++ +I+ EG++ A EL++ +I P
Sbjct: 295 AGRWDDGAKLLRDMI-KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDT 352
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY L GF ++ +A +L M++KG G + +N LI+G+ + +D ELF +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ R +V D V T ++ F G+ + A + ++ ++ R+ + V+ +LL+ L +G+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A +F+++ + ++ +NI+++ N K +A F K
Sbjct: 473 PEKALEIFEKI-----EKSKMELDIGIYNIIIHGMCNASKVDDAWDLF----CSLPLKGV 523
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGG 294
DV YN +I C+ G LSEA+ LF ++ SP+ T+ + A G
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R K+Y+ + L + I N+ + + +IN C ++ +A II + P
Sbjct: 84 RTKQYDLVLDLCKQMELK-GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG-YEPD 141
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L G GR+ EAL+L+ M+ GH + N L++G G + A L D
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ E + V ++ +G+ AM+ + + +R+ K+ V +++++ L K G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A+ LF++M F+A ++ C+ G++ + R +
Sbjct: 262 SLDNAFNLFNEM----EIKGFKADIIIYTTLIRGFCYA-GRWDDGAKLLRDM----IKRK 312
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV ++ +I F + G L EAE L +E+ + +SPD T+ + +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K ++A+ LF T+ I PN+V+Y+++I+ C+ GR A L +I P
Sbjct: 268 KYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPD 325
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ L F+ G++VEA L EM+ + + Y++LI+GF LD+A ++F+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + D V T ++ F R +E M+ ++ + R VT N+L++ L + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---------- 232
A +F +M+ + PPN T+N +++ GK +A+ F
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIM-----TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 233 ------------KAGTKSNS---------KAFAMDVAGYNNIISRFCENGLLSEAETLFE 271
KAG + K DV YN +IS FC G EA+ LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 272 ELCSKSLSPD 281
E+ P+
Sbjct: 561 EMKEDGTLPN 570
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 46/231 (19%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ +I P+IV+Y+++IN C R+D A +++ +++ F P VTY L KGF
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV--- 134
R+ E +++ REM +G +++ YN LI G + G+ D A E+F E+ V DGV
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-----VSDGVPPN 465
Query: 135 --VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW---- 188
T ++ NG+ ++AM ++ L + + T T N+++E + K GK W
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 189 -------------------------------ALFDQMLDNHTPPNFQAVNS 208
ALF +M ++ T PN N+
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PNIV+ ++++N +C R+ A+ L + T + P+ VT+ L G + EA+
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L+ M+ KG D + Y +++G + G+ D A L +++++ L ++ T ++
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+A++ +K + + + VT + L+ L +G+ + A L M++ P+
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TF+ +++ GK EA + + +S + + Y+++I+ FC + L
Sbjct: 328 -----TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS----IVTYSSLINGFCMHDRLD 378
Query: 265 EAETLFEELCSKSLSPDVPTH 285
EA+ +FE + SK PDV T+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTY 399
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +EA+AL + P++V+Y V+N C G D+A L + P +
Sbjct: 201 KASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLI 258
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G + +AL+L +EM KG + + Y++LIS G A+ L ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
ER + D + ++ F G+ EA Y ++ R + VT + L+ H +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A +F+ M+ H P+ T+N ++ + E + FR+ + +
Sbjct: 379 EAKQMFEFMVSKHCFPDVV-----TYNTLIKGFCKYKRVEEGMEVFREM----SQRGLVG 429
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ YN +I + G A+ +F+E+ S + P++ T+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 10/252 (3%)
Query: 40 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL 99
E ++D A+ L+ ++ + PF PS + + L + + L +M N G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 100 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL 159
Y+ LI+ F L A + ++ + + V ++ + + ++ R EA+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 160 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 219
++ VT N L+ L H K ++A AL D+M+ P+ T+ ++VN
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV-----TYGVVVNGLC 232
Query: 220 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 279
G A K V YN II C+ + +A LF+E+ +K +
Sbjct: 233 KRGDTDLAFNLLNKM----EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 280 PDVPTHFACVSA 291
P+V T+ + +S
Sbjct: 289 PNVVTYSSLISC 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA +F F ++ + P++V+YN +I C RV+ +E++R + G + VT
Sbjct: 376 RLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVT 433
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL--------------------- 104
Y L +G AG A ++ +EM++ G + + YN L
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 105 --------------ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 150
I G + G ++ +LF L + + D V T + F G +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 151 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
EA +K + + N L+ L+ G + + L +M
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +A+ +F + +S + P I +YN +I C G+V+ +L+ ++ + P V
Sbjct: 481 KLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVA 538
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + GF G EA L +EM G +S YN LI L G+ + + EL E++
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 11/294 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + ++A+ LF T+ I PN+V+Y+++I+ C GR A +L +I P+
Sbjct: 272 KYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPN 329
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L F+ G+ VEA L +M+ + D YN+L++GF LDKA ++F+
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + D V T ++ F + R ++ + ++ + R VT L++ L G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A +F QM+ + PP+ T++I+++ N GK +AL F KS K
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIM-----TYSILLDGLCNNGKLEKALEVFDYM-QKSEIK- 502
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+D+ Y +I C+ G + + LF L K + P+V T+ +S R
Sbjct: 503 --LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 17/285 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ ++ EA L+ +S I P+I +YN+++N C R+D A +++ +++ F P
Sbjct: 342 KEGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PD 399
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L KGF + R+ + +L REM ++G D++ Y LI G G+ D A ++F
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ + D + + ++ NNG+ ++A++ + + + K+ ++E + K G
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSN 239
K W LF + PN T+N M++ + EA A +K G N
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVV-----TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
S YN +I +G + + L E+ S D T
Sbjct: 575 S-------GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 46/318 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+++ I+L + IV + +YN +IN C ++ +AL L ++ + PS
Sbjct: 97 KMKKFDVVISLGEKM-QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG-YEPS 154
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT L G+ RI +A+ L+ +M+ G+ D++ + LI G +A L D
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 123 ELKER-----CLVYDGVVNA--------------TYME--------WFFNNGRDK----- 150
+ +R + Y VVN ME FN D
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 151 ---EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+A++ +K + + + VT + L+ L +G+ + A L M++ PN
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV--- 331
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
TFN +++ GKF EA + +S D+ YN++++ FC + L +A+
Sbjct: 332 --TFNALIDAFVKEGKFVEAEKLYDDMIKRS----IDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 268 TLFEELCSKSLSPDVPTH 285
+FE + SK PDV T+
Sbjct: 386 QMFEFMVSKDCFPDVVTY 403
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 13/283 (4%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
KR ++A+AL + P+ +++ +I+ + A+ L ++ P+
Sbjct: 168 GKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNL 225
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + G G AL+LL +M AD +++N +I + ++D A LF E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
++ + + + V ++ + + GR +A +++++ VT N L++ +K GK
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKA 242
+A L+D M+ P+ T+N +VN C H+ L ++ SK
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIF-----TYNSLVNGFC-----MHDRLDKAKQMFEFMVSKD 395
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
DV YN +I FC++ + + LF E+ + L D T+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 46/286 (16%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ ++AI LF +S +P+IV +N +++ + DV + L + T
Sbjct: 65 KLDDAIGLFGGM-VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYT 122
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L F +I AL LL +M+ G+ + ++L++G+ + A L D++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E ++ +T L+ L H K +
Sbjct: 183 EM-----------------------------------GYRPDTITFTTLIHGLFLHNKAS 207
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A AL D+M+ PN T+ ++VN G AL K +
Sbjct: 208 EAVALVDRMVQRGCQPNLV-----TYGVVVNGLCKRGDTDLALNLLNKM----EAAKIEA 258
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV +N II C+ + +A LF+E+ +K + P+V T+ + +S
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +A+ +F + +S I +I Y +I C G+VD +L+ + + P+ VT
Sbjct: 485 KLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVT 542
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G S + EA LL++M G +S YN LI L G+ + EL E++
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMD 154
V D + DK +D
Sbjct: 603 SCRFVGDASTIGLVANMLHDGRLDKSFLD 631
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 11/280 (3%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
+R+++A L + I PN+V++N +I+ EG++ A +LY +I + P
Sbjct: 309 ERWSDASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIF 366
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
TY L GF R+ EA + M++K + + YN LI+GF + +D+ ELF E+
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+R LV + V T + FF A +K ++ +T N LL+ L K+GK
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+A +F+ + + P T+NIM+ GK + F + K
Sbjct: 487 EKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVEDGWDLF----CSLSLKGVK 537
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
DV YN +IS FC GL EA+ LF ++ PD T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN+++Y+++I+ C+ R A L +I P+ VT+ L F+ G++VEA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEA 349
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L EM+ + D Y++LI+GF LD+A +F+ + + + V T +
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F R E ++ ++ + R VT L+ + A +F QM+ + PN
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
T+N +++ GK +A+ F + YN +I C+ G
Sbjct: 470 IM-----TYNTLLDGLCKNGKLEKAMVVFEYL----QRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 263 LSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ + LF L K + PDV + +S
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +EA+AL Q PN+V+Y V+N C G +D+A L + A A + V
Sbjct: 205 KASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEANVVI 262
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + +AL+L EM NKG + + Y++LIS A+ L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
ER + + V ++ F G+ EA Y ++ R T + L+ H +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKA 242
+A +F+ M+ PN T+N ++N + E + FR + G N+
Sbjct: 383 EAKHMFELMISKDCFPNVV-----TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 243 FAMDVAG----------------------------YNNIISRFCENGLLSEAETLFEELC 274
+ + G YN ++ C+NG L +A +FE L
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 275 SKSLSPDVPTH 285
+ P + T+
Sbjct: 498 RSKMEPTIYTY 508
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 130/289 (44%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+++ I+L + I N+ +YN +IN C ++ +AL L ++ + PS
Sbjct: 97 KMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG-YEPS 154
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT L G+ RI +A+ L+ +M+ G+ D++ + LI G +A L D
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ +R + V + G A + + + + V + +++ L K+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+ A LF +M + PN T++ +++ N ++ +A + + +
Sbjct: 275 HEDDALNLFTEMENKGVRPNVI-----TYSSLISCLCNYERWSDA----SRLLSDMIERK 325
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V +N +I F + G L EAE L++E+ +S+ PD+ T+ + ++
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 105/262 (40%), Gaps = 10/262 (3%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
Y ++ ++D A+ L+ ++ + P PS + L + + L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
G + YN LI+ F + A L ++ + V ++ + + + R
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 209
+A+ +++ ++ +T L+ L H K ++A AL D+M+ PN
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV----- 226
Query: 210 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 269
T+ ++VN G A K + +V Y+ +I C+ +A L
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKM----EAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 270 FEELCSKSLSPDVPTHFACVSA 291
F E+ +K + P+V T+ + +S
Sbjct: 283 FTEMENKGVRPNVITYSSLISC 304
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+++A++LF+ I ++V+Y+++I C++G+ D ++ R +I P VT+
Sbjct: 261 FDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII-PDVVTF 318
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L F+ G+++EA +L EM+ +G D++ YN+LI GF + L +AN++FD +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ D V + + + R + M ++ + + +T N L+ + GK
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 246
A LF +M+ PP+ T+ I+++ + G+ ++AL F K +
Sbjct: 439 AKELFQEMVSRGVPPSVV-----TYGILLDGLCDNGELNKALEIFEKM----QKSRMTLG 489
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ YN II C + +A +LF L K + PDV T+
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA+AL P++V+ + +IN C +GRV AL L ++ F P VT
Sbjct: 155 RVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVT 212
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + +G ALDL R+M + A + Y+ +I + G+ D A LF+E++
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ + D V ++ + N+G+ + + ++ R VT + L++V +K GK
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 186 QAWALFDQMLDNHTPPNFQAVNS------------------------------DTFNIMV 215
+A L+++M+ P+ NS T++I++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 216 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 275
N + + + FR+ +SK + YN ++ FC++G L+ A+ LF+E+ S
Sbjct: 393 NSYCKAKRVDDGMRLFREI----SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 276 KSLSPDVPTH 285
+ + P V T+
Sbjct: 449 RGVPPSVVTY 458
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 13/277 (4%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA L++ T+ I P+ ++YN++I+ C E + A +++ ++ + P VTY
Sbjct: 333 EAKELYNEMITRG-IAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSI 390
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L + A R+ + + L RE+ +KG +++ YN L+ GF + G L+ A ELF E+ R
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
+ V ++ +NG +A++ ++ + + + N+++ + K AW
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
+LF + D P+ T+N+M+ G EA FRK D
Sbjct: 511 SLFCSLSDKGVKPDVV-----TYNVMIGGLCKKGSLSEADMLFRKM----KEDGCTPDDF 561
Query: 249 GYNNII-SRFCENGLLSEAETLFEELCSKSLSPDVPT 284
YN +I + +GL+S E L EE+ S D T
Sbjct: 562 TYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSST 597
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ ++++ ++N C EGRV A+ L ++ P VT L G GR+ EAL
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALV 196
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L+ M+ G D + Y +++ + GN A +LF +++ER + V + ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+G +A+ + + + K VT + L+ L GK + +M+ + P+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TF+ +++ GK EA + + T+ A D YN++I FC+ L
Sbjct: 317 -----TFSALIDVFVKEGKLLEAKELYNEMITR----GIAPDTITYNSLIDGFCKENCLH 367
Query: 265 EAETLFEELCSKSLSPDVPTH 285
EA +F+ + SK PD+ T+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTY 388
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R K+Y+ + F + I ++ + +IN +C + ++ A + + P
Sbjct: 82 RTKQYDLVLG-FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG-YEPD 139
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+T+ L GF GR+ EA+ L+ M+ D + + LI+G G + +A L D
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ E D V + +G A+D ++ + +R K + V +++++ L K G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSD--TFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
A +LF++M + + +D T++ ++ N GK+ + R+ ++
Sbjct: 260 SFDDALSLFNEM-------EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN-- 310
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
DV ++ +I F + G L EA+ L+ E+ ++ ++PD T+
Sbjct: 311 --IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ N+AI LF QS +P + +N + + + D+ L + + T
Sbjct: 50 KVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG-IEHDMYT 107
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ + +++ A +L G+ D++ ++ L++GF G + +A L D +
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E D V +T + GR EA+ +++ F+ VT +L L K G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A LF +M + + + ++I+++ G F +AL+ F + K
Sbjct: 228 LALDLFRKMEERNIKASVVQ-----YSIVIDSLCKDGSFDDALSLFNEM----EMKGIKA 278
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV Y+++I C +G + + E+ +++ PDV T A +
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN V+Y V+N C G+ +A+EL R + AV Y + G G + A +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM KG + + YN LI GF G D +L ++ +R + + V + ++ F
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ +EA + +K ++ R +T L++ K +A + D M+ PN +
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TFNI++N + + L FRK + D YN +I FCE G L+
Sbjct: 405 -----TFNILINGYCKANRIDDGLELFRKMSL----RGVVADTVTYNTLIQGFCELGKLN 455
Query: 265 EAETLFEELCSKSLSPDVPTH 285
A+ LF+E+ S+ + P++ T+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTY 476
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
H I P+ ++Y ++I+ C E +D A ++ ++ + P+ T+ L G+
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGY 413
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
A RI + L+L R+M +G AD++ YN LI GF ELG L+ A ELF E+ R + +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V ++ +NG ++A++ ++ + + ++ N+++ + K AW LF
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
+ P + T+NIM+ G EA FRK A D YN +
Sbjct: 534 LPLKGVKPGVK-----TYNIMIGGLCKKGPLSEAELLFRKM----EEDGHAPDGWTYNIL 584
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
I +G +++ L EEL S D T
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 47/318 (14%)
Query: 14 FHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTK 71
F+ F I NI++YN +I C+ GR D +L R +I P+ VT+ L
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLID 341
Query: 72 GFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN------------- 118
F+ G++ EA +L +EM+++G D++ Y +LI GF + +LDKAN
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 119 ----------------------ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 156
ELF ++ R +V D V T ++ F G+ A + +
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 157 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 216
+ ++ R+ VT +LL+ L +G+ +A +F+++ + ++ +NI+++
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-----EKSKMELDIGIYNIIIH 516
Query: 217 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 276
N K +A F K V YN +I C+ G LSEAE LF ++
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPG----VKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 277 SLSPDVPTHFACVSAAGG 294
+PD T+ + A G
Sbjct: 573 GHAPDGWTYNILIRAHLG 590
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+Y+ +AL + I N+ + + +IN C ++ +A II + P+
Sbjct: 100 KTKQYDLVLALCKQMELKG-IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG-YEPN 157
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+T+ L G GR+ EAL+L+ M+ GH D + N L++G G +A L D
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ E + V + +G+ AM+ + + +R K+ V +++++ L KHG
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A+ LF++M N T+NI++ N G++ + R +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNII-----TYNILIGGFCNAGRWDDGAKLLRDM----IKRK 328
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V ++ +I F + G L EAE L +E+ + ++PD T+ + +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
K N+A+ LF I PN+V+YN++I C+ GR A L +I P+ V
Sbjct: 269 KNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVV 326
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
T+ L F+ G++VEA L EM+ + D Y++LI+GF LD+A +F+ +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ + V T ++ F R +E M+ ++ + R VT N L++ L + G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
A +F +M+ + PP+ T++I+++ GK +AL F KS +
Sbjct: 447 DMAQKIFKKMVSDGVPPDII-----TYSILLDGLCKYGKLEKALVVFEYL-QKSKMEP-- 498
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
D+ YN +I C+ G + + LF L K + P+V + +S
Sbjct: 499 -DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 53/287 (18%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
K Y+E I + +I P+I +Y+++IN C R+D A ++ +I+ F P+ V
Sbjct: 346 KLYDEMI--------KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVV 396
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
TY L KGF A R+ E ++L REM +G +++ YN LI G + G+ D A ++F +
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK- 455
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+V DGV +T ++LL+ L K+GK
Sbjct: 456 ----MVSDGVPPDI------------------------------ITYSILLDGLCKYGKL 481
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+A +F+ + + P+ T+NIM+ GK + F + K
Sbjct: 482 EKALVVFEYLQKSKMEPDIY-----TYNIMIEGMCKAGKVEDGWDLF----CSLSLKGVK 532
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V Y +IS FC GL EA+ LF E+ P+ T+ + A
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 11/282 (3%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
KR +EA+AL F PN V++N +I+ + A+ L ++A P
Sbjct: 163 GKRISEAVALVDQMFVME-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDL 220
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
TY + G G I AL LL++M AD ++Y +I N++ A LF E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ + + + V + + N GR +A +++R+ VT + L++ +K GK
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A L+D+M+ P+ T++ ++N + EA F +K F
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAKHMFELMISKD---CF 392
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+V YN +I FC+ + E LF E+ + L + T+
Sbjct: 393 P-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 10/244 (4%)
Query: 42 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 101
++D A++L+ ++ + P PS V + L + + L M N D Y
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 102 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 161
N LI+ F L A + ++ + D V ++ + + + R EA+ +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 162 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 221
+++ VT N L+ L H K ++A AL D+M+ P+ T+ +VN
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-----TYGTVVNGLCKR 233
Query: 222 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
G AL+ +K K +A DV Y II C +++A LF E+ +K + P+
Sbjct: 234 GDIDLALSLLKKM-EKGKIEA---DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 282 VPTH 285
V T+
Sbjct: 290 VVTY 293
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 11/283 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++K Y+ I+LFH I ++ SYN VIN C R +AL + ++ + P
Sbjct: 81 KSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG-YEPD 138
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT L GF R+ +A+DL+ +M G D ++YN +I G ++G ++ A ELFD
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ + D V + + +GR +A + ++ R +T +++V +K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K ++A L+++M P+ T+N ++N G+ EA T K
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVF-----TYNSLINGLCMHGRVDEAKQMLDLMVT----KG 309
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
DV YN +I+ FC++ + E LF E+ + L D T+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 14/275 (5%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + +IVPN++++ VI+ EG+ A++LY + P T
Sbjct: 224 RWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFT 281
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L G GR+ EA +L M+ KG D + YN LI+GF + +D+ +LF E+
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+R LV D + T ++ +F GR A + + S MD + + T ++LL L + +
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIF-SRMDSRPNIR--TYSILLYGLCMNWRVE 398
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A LF+ M + + T+NI+++ +G +A FR + K
Sbjct: 399 KALVLFENMQKSEIELDIT-----TYNIVIHGMCKIGNVEDAWDLFRSL----SCKGLKP 449
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 280
DV Y +IS FC +++ L+ ++ L P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + I PN+V++N++I+ EG++ A +L+ +I + P+ VT
Sbjct: 290 RWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVT 347
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L GF R+ EA + M++K D + YN LI+GF + + ELF ++
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
R LV + V T + FF A +K ++ +T N LL+ L K+GK
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A +F+ + + P+ T+NIM GK + F + K
Sbjct: 468 KAMVVFEYLQKSKMEPDIY-----TYNIMSEGMCKAGKVEDGWDLF----CSLSLKGVKP 518
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV YN +IS FC+ GL EA TLF ++ PD T+ + A
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 13/281 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA+AL + P+ V++ +++ + A+ L ++ P VT
Sbjct: 150 RISEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVT 207
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G G AL+LL +M AD ++Y+ +I + ++D A LF E+
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ + D ++ + N GR +A +++R+ VT N L++ K GK
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKAFA 244
+A LFD+M+ PN T+N ++N C H+ L ++ T SK
Sbjct: 328 EAEKLFDEMIQRSIDPNIV-----TYNSLINGFC-----MHDRLDEAQQIFTLMVSKDCL 377
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
DV YN +I+ FC+ + + LF ++ + L + T+
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+ +YN +IN C ++ AL + ++ +GPS VT L GF RI EA+ L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 86 LREMLNKGHGADSLVYNNL-----------------------------------ISGFLE 110
+ +M+ G+ D++ + L I+G +
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 111 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 170
G D A L +++++ + D V+ +T ++ +A++ + + ++ + T
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
+ L+ L +G+ + A L ML+ PN TFN +++ GK EA
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVV-----TFNSLIDAFAKEGKLIEAEKL 332
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
F + +S ++ YN++I+ FC + L EA+ +F + SK PDV T+
Sbjct: 333 FDEMIQRS----IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 24/292 (8%)
Query: 10 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
A+ LF T+ I PN+V+YN++IN C+ GR A L +++ P+ VT+ L
Sbjct: 277 AVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNAL 334
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER-C 128
F G++VEA L EM+ + D++ YN LI+GF LD+A ++F + + C
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 129 L----VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
L Y+ ++N F R ++ ++ ++ + R VT +++ + G
Sbjct: 395 LPNIQTYNTLING-----FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
A +F QM+ N P + T++I+++ + GK AL F+
Sbjct: 450 DSAQMVFKQMVSNRVPTDIM-----TYSILLHGLCSYGKLDTALVIFKYL----QKSEME 500
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+++ YN +I C+ G + EA LF CS S+ PDV T+ +S R
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKR 549
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 14/286 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + I PN+V++N +I+ EG++ A +L+ +I + P +T
Sbjct: 308 RWSDASRLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTIT 365
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L GF R+ EA + + M++K + YN LI+GF + ++ ELF E+
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+R LV + V T ++ FF G A +K ++ + +T ++LL L +GK
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A +F + + +N +N M+ GK EA F K
Sbjct: 486 TALVIF-----KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP------- 533
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV YN +IS C LL EA+ LF ++ P+ T+ + A
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 45/296 (15%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+ ++++N +C R+ A+ L ++ + P T+ L G + EA+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLD--------------KAN------------ 118
L+ +M+ +G D + Y +++G + G++D KAN
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 119 ---------ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
+LF E++ + + + V + + N GR +A ++++++ V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 170 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
T N L++ K GK +A L ++M+ P ++ T+N+++N + EA
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP-----DTITYNLLINGFCMHNRLDEAKQ 384
Query: 230 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
F+ SK ++ YN +I+ FC+ + + LF E+ + L + T+
Sbjct: 385 MFKFMV----SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 10/251 (3%)
Query: 35 NTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 94
N D +VD A++L+ ++ + PF PS V + L + + L +M G
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 95 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 154
D Y+ I+ F L A + ++ + D V ++ + + ++ R +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 155 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 214
+++ +K T L+ L H K ++A AL DQM+ P+ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 215 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 274
VN G AL K + +V +N II C+ + A LF E+
Sbjct: 230 VNGLCKRGDIDLALNLLNKM----EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 275 SKSLSPDVPTH 285
+K + P+V T+
Sbjct: 286 TKGIRPNVVTY 296
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ ++A+ LF +S P+IV +N +++ + ++ + L + T T
Sbjct: 63 KVDDAVDLFGDM-VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYT 120
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y F ++ AL +L +M+ G+ D + ++L++G+ + A L D++
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E D T + F + + EA+ ++ R + VT ++ L K G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A L ++M N FN +++ A+ F T+ +K
Sbjct: 241 LALNLLNKMEAARIKANVV-----IFNTIIDSLCKYRHVEVAVDLF----TEMETKGIRP 291
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V YN++I+ C G S+A L + K ++P+V T A + A
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ + A+ +F + +S + NI YN +I C G+V A +L+ + P VT
Sbjct: 483 KLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF----CSLSIKPDVVT 537
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G S + EA DL R+M G +S YN LI L + + EL E++
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 126 ERCLVYDG 133
V D
Sbjct: 598 SSGFVGDA 605
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA+ L + P +++ N ++N C G+V A+ L ++ T F P+ VT
Sbjct: 173 RVSEALELVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVT 230
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + +G+ A++LLR+M + D++ Y+ +I G + G+LD A LF+E++
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ D + T + F N GR + + ++ R+ VT +VL++ +K GK
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 186 QAWALFDQMLDNHTPPNFQAVNS------------------------------DTFNIMV 215
+A L +M+ PN NS TFNI++
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 216 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 275
N + + L FR+ + + YN ++ FC++G L A+ LF+E+ S
Sbjct: 411 NGYCKANRIDDGLELFREMSL----RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 276 KSLSPDVPTH 285
+ + PD+ ++
Sbjct: 467 RRVRPDIVSY 476
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
A R+++ L + I PN+V+++ +I++ EG++ A +L + ++ P+
Sbjct: 311 AGRWDDGAKLLRDMI-KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNT 368
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
+TY L GF R+ EA+ ++ M++KG D + +N LI+G+ + +D ELF E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ R ++ + V T ++ F +G+ + A ++ ++ R+ + V+ +LL+ L +G+
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A +F ++ + ++ + I+++ N K +A F K
Sbjct: 489 LEKALEIFGKI-----EKSKMELDIGIYMIIIHGMCNASKVDDAWDLF----CSLPLKGV 539
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTA 302
+D YN +IS C LS+A+ LF ++ + +PD T+ + A G T A
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
Q I PN ++YN++I+ C E R++ A+++ +I+ P +T+ L G+ A RI
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRI 419
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+ L+L REM +G A+++ YN L+ GF + G L+ A +LF E+ R + D V
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ +NG ++A++ + + + ++ +++ + K AW LF +
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL----- 534
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P +++ +NIM++E +A FRK + A D YN +I
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKM----TEEGHAPDELTYNILIRAHLG 590
Query: 260 NGLLSEAETLFEELCSKSLSPDVPT 284
+ + A L EE+ S DV T
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVST 615
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 11/283 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+Y +AL ++ I +I + + +IN C ++ A I+ + P
Sbjct: 100 KTKQYELVLALCKQMESKG-IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG-YEPD 157
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V + L G R+ EAL+L+ M+ GH + N L++G G + A L D
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ E + V + +G+ AM+ + + +R K+ V +++++ L K G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A+ LF++M F+A + T+N ++ N G++ + R + S
Sbjct: 278 SLDNAFNLFNEM----EIKGFKA-DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP- 331
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+V ++ +I F + G L EA+ L +E+ + ++P+ T+
Sbjct: 332 ---NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 10/258 (3%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
+SY + +++ + D A++L+R +I + P P+ + + L + L L +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
+M +KG + +I+ F L A ++ + D V+ T +
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
R EA++ +++ K T +T N L+ L +GK + A L D+M++ PN +
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN-EVTY 231
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
N+M G+ A+ RK + +D Y+ II C++G L A
Sbjct: 232 GPVLNVMCKS----GQTALAMELLRKM----EERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 268 TLFEELCSKSLSPDVPTH 285
LF E+ K D+ T+
Sbjct: 284 NLFNEMEIKGFKADIITY 301
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + ++A+ LF T+ I PN+V+Y+++I+ C GR A +L +I P+
Sbjct: 197 KYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPN 254
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L F+ G+ VEA L +M+ + D YN+LI+GF LDKA ++F+
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + D T ++ F + R ++ + ++ + R VT L++ L G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A +F QM+ + PP+ T++I+++ N GK +AL F KS K
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIM-----TYSILLDGLCNNGKLEKALEVFDYM-QKSEIK- 427
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+D+ Y +I C+ G + + LF L K + P+V T+ +S R
Sbjct: 428 --LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
H + +I P+I +YN++IN C R+D A +++ +++ F P TY L KGF
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGF 335
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
+ R+ + +L REM ++G D++ Y LI G G+ D A ++F ++ + D
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
+ + ++ NNG+ ++A++ + + + K+ ++E + K GK W LF
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
+ PN T+N M++ + EA A +K D YN +
Sbjct: 456 LSLKGVKPNVV-----TYNTMISGLCSKRLLQEAYALLKKM----KEDGPLPDSGTYNTL 506
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
I +G + + L E+ S D T
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 46/318 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+++ I+L + I N+ +YN +IN C ++ +AL L ++ + PS
Sbjct: 22 KMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG-YEPS 79
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI----------------- 105
VT L G+ RI +A+ L+ +M+ G+ D++ + LI
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 106 ------------------SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
+G + G++D A L ++++ + D V+ T ++
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+A++ +K + + + VT + L+ L +G+ + A L M++ PN
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV--- 256
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
TFN +++ GKF EA K ++ D+ YN++I+ FC + L +A+
Sbjct: 257 --TFNALIDAFVKEGKFVEA----EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 268 TLFEELCSKSLSPDVPTH 285
+FE + SK PD+ T+
Sbjct: 311 QMFEFMVSKDCFPDLDTY 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 13/283 (4%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
KR ++A+AL + P+ +++ +I+ + A+ L ++ P+
Sbjct: 93 GKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNL 150
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + G G I A +LL +M AD +++N +I + ++D A LF E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
++ + + + V ++ + + GR +A +++++ VT N L++ +K GK
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKA 242
+A L D M+ P+ T+N ++N C H+ L ++ SK
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIF-----TYNSLINGFC-----MHDRLDKAKQMFEFMVSKD 320
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
D+ YN +I FC++ + + LF E+ + L D T+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 45/274 (16%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+S +P+I +N +++ + D+ + L + + TY L F
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRS 59
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+I AL LL +M+ G+ + ++L++G+ + A L D++ E
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM---------- 109
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++ +T L+ L H K ++A AL D+M+
Sbjct: 110 -------------------------GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
PN T+ ++VN G A K + DV +N II
Sbjct: 145 GCQPNLV-----TYGVVVNGLCKRGDIDLAFNLLNKM----EAAKIEADVVIFNTIIDSL 195
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
C+ + +A LF+E+ +K + P+V T+ + +S
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +A+ +F + +S I +I Y +I C G+VD +L+ + + P+ VT
Sbjct: 410 KLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVT 467
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G S + EA LL++M G DS YN LI L G+ + EL E++
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMD 154
V D + DK +D
Sbjct: 528 SCRFVGDASTIGLVANMLHDGRLDKSFLD 556
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 12/261 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+ SY +++ C G++D A + + A P+ V + L F RI EA++
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ REM KG D +N+LISG E+ + A L ++ +V + V T + F
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-DNHTPPNF 203
G KEA ++ + + +T N L++ L + G+ +A +LF++ML D H P N
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
NI++N G EA+ F+K S D+ +N++I+ C G +
Sbjct: 601 SC------NILINGLCRSGMVEEAVE-FQKEMVLRGSTP---DIVTFNSLINGLCRAGRI 650
Query: 264 SEAETLFEELCSKSLSPDVPT 284
+ T+F +L ++ + PD T
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVT 671
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 23/279 (8%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
T+ VPN V Y +I++ RV+ AL+L + P A T+ + G
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFD 301
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
RI EA ++ ML +G D + Y L++G ++G +D A +LF + + + V+
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFN 357
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC--NVLLEVLLKHGKKTQAWALFDQML 195
T + F +GR +A + S M + + P C N L+ K G A + M
Sbjct: 358 TLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNN 252
+ PN ++ I+V+ LGK EA L G K N+ G+N
Sbjct: 417 NKGCKPNVY-----SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT-------VGFNC 464
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+IS FC+ + EA +F E+ K PDV T + +S
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 9/256 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P IV +N +I+ GR+D A + ++ + P TY L G+ G + AL+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L +M NKG + Y L+ GF +LG +D+A + +E+ L + V + F
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
R EA++ ++ + + K T N L+ L + + A L M+
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV----- 525
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
N+ T+N ++N G+ EA RK + + +D YN++I C G +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEA----RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 265 EAETLFEELCSKSLSP 280
+A +LFE++ +P
Sbjct: 582 KARSLFEKMLRDGHAP 597
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 16/271 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P + ++ V+ C +D AL L R + P++V Y+ L R+ EA
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEA 271
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L LL EM G D+ +N++I G + +++A ++ + + R D + M
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH-TPP 201
GR +D+ K L R K V N L+ + HG+ A A+ M+ ++ P
Sbjct: 332 LCKIGR----VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+ NS + L E L R G K N V Y ++ FC+ G
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLA--LEVLHDMRNKGCKPN-------VYSYTILVDGFCKLG 438
Query: 262 LLSEAETLFEELCSKSLSPDVPTHFACVSAA 292
+ EA + E+ + L P+ F C+ +A
Sbjct: 439 KIDEAYNVLNEMSADGLKPNT-VGFNCLISA 468
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHII-ATAPFGPSAVTYRHLTKGFISAGRIVE 81
+V N V+YN +IN G + A +L ++ +P +TY L KG AG + +
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDK 582
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
A L +ML GH ++ N LI+G G +++A E E+ R D V + +
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
GR ++ + ++ L VT N L+ L K G A L D+ +++ P
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEA 227
N + + +I+ E + +F+ A
Sbjct: 703 NHRTWSILLQSIIPQETLDRRRFYNA 728
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 13/261 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P SYN V+ VA ++ +++ P+ T+ + K F + I AL
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LLR+M G +S++Y LI + +++A +L +E+ V D +
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
R EA ++ R F +T L+ L K G+ A LF ++ P +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI------PKPE 352
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
V FN +++ G+ +A A T S DV YN++I + + GL+
Sbjct: 353 IV---IFNTLIHGFVTHGRLDDAKAVLSDMVT---SYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 265 EAETLFEELCSKSLSPDVPTH 285
A + ++ +K P+V ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSY 427
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 5 KRYNEAIALFHFFFTQS----NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+RY I +F+Q I ++ S+ +I+ C R+ AL + ++ +
Sbjct: 85 RRYETVI-----YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YE 138
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
PS VT+ L GF RI +A L+ M+ G+ + +VYN LI G + G L+ A EL
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
+E++++ L D V T + +GR +A + +M R VT L++V +K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
G +A L+ +M+ + P N+ T+N ++N G+ ++A TF S
Sbjct: 259 QGNLDEAQELYKEMIQSSVDP-----NNVTYNSIINGLCMHGRLYDAKKTFDLMA----S 309
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
K +V YN +IS FC+ ++ E LF+ + + + D+ T+
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 6/214 (2%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
QS++ PN V+YN++IN C GR+ A + + + + F P+ VTY L GF +
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFRMV 332
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
E + L + M +G AD YN LI G+ ++G L A ++F + R + D + +
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ NG + A+ + + + + + V N+++ L K K +AW LF ++
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 233
P ++ T+ IM+ G EA R+
Sbjct: 453 KP-----DARTYTIMILGLCKNGPRREADELIRR 481
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 12/261 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++V+YN ++ C GR A + R ++ + P VT+ L F+ G + EA +L
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
+EM+ +++ YN++I+G G L A + FD + + + V T + F
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
E M ++ + F T N L+ + GK A +F M+ P+
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII- 387
Query: 206 VNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T I+++ C N G+ AL F + + K + YN +I C+ +
Sbjct: 388 ----THCILLHGLCVN-GEIESALVKFDD--MRESEKYIG--IVAYNIMIHGLCKADKVE 438
Query: 265 EAETLFEELCSKSLSPDVPTH 285
+A LF L + + PD T+
Sbjct: 439 KAWELFCRLPVEGVKPDARTY 459
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 11/277 (3%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA LFH F + + P+ V++ +IN +C G + A ++ H+I A P+ VTY
Sbjct: 404 EAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTT 461
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L G G + A +LL EM G + YN++++G + GN+++A +L E +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
L D V T M+ + +G +A + K ++ + + T VT NVL+ HG
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
L + ML P N+ TFN +V + A A ++ S+ D
Sbjct: 582 KLLNWMLAKGIAP-----NATTFNSLVKQYCIRNNLKAATAIYKDMC----SRGVGPDGK 632
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
Y N++ C+ + EA LF+E+ K S V T+
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 16/268 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ + PN Y ++I C ++ A E + +I P V Y L GF G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDI 367
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
A EM ++ D L Y +ISGF ++G++ +A +LF E+ + L D V
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + G K+A + ++ VT L++ L K G A L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISR 256
PN T+N +VN G EA + F AG + D Y ++
Sbjct: 488 QPNIF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDA 535
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPT 284
+C++G + +A+ + +E+ K L P + T
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 17/289 (5%)
Query: 7 YNEAIALFHFF-FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
Y A A+ F F + + N+ SYN VI+ C GR+ A L ++ + P ++
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVIS 283
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G+ G + + L+ M KG +S +Y ++I + L +A E F E+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ ++ D VV T ++ F G + A + + R +T ++ + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKA 242
+A LF +M P +S TF ++N G +A +AG N
Sbjct: 404 EAGKLFHEMFCKGLEP-----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN--- 455
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
V Y +I C+ G L A L E+ L P++ T+ + V+
Sbjct: 456 ----VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+++SY+ V+N +C G +D +L ++ P++ Y + ++ EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EM+ +G D++VY LI GF + G++ A++ F E+ R + D + + F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA + + + + VT L+ K G A+ + + M+ PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-- 455
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
V T + + +L +E L K G + N + YN+I++ C++G +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-------IFTYNSIVNGLCKSGNIE 508
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSA 291
EA L E + L+ D T+ + A
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDA 535
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I PN ++N+++ +C + A +Y+ + + GP TY +L KG A + EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEA 650
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
L +EM KG Y+ LI GFL+ +A E+FD+++ L D
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 11/277 (3%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA LFH F + + P+ V++ +IN +C G + A ++ H+I A P+ VTY
Sbjct: 404 EAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTT 461
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L G G + A +LL EM G + YN++++G + GN+++A +L E +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
L D V T M+ + +G +A + K ++ + + T VT NVL+ HG
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
L + ML P N+ TFN +V + A A ++ S+ D
Sbjct: 582 KLLNWMLAKGIAP-----NATTFNSLVKQYCIRNNLKAATAIYKDMC----SRGVGPDGK 632
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
Y N++ C+ + EA LF+E+ K S V T+
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 16/268 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ + PN Y ++I C ++ A E + +I P V Y L GF G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDI 367
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
A EM ++ D L Y +ISGF ++G++ +A +LF E+ + L D V
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + G K+A + ++ VT L++ L K G A L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISR 256
PN T+N +VN G EA + F AG + D Y ++
Sbjct: 488 QPNIF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDA 535
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPT 284
+C++G + +A+ + +E+ K L P + T
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 17/289 (5%)
Query: 7 YNEAIALFHFF-FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
Y A A+ F F + + N+ SYN VI+ C GR+ A L ++ + P ++
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVIS 283
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G+ G + + L+ M KG +S +Y ++I + L +A E F E+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ ++ D VV T ++ F G + A + + R +T ++ + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKA 242
+A LF +M P +S TF ++N G +A +AG N
Sbjct: 404 EAGKLFHEMFCKGLEP-----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN--- 455
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
V Y +I C+ G L A L E+ L P++ T+ + V+
Sbjct: 456 ----VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+++SY+ V+N +C G +D +L ++ P++ Y + ++ EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EM+ +G D++VY LI GF + G++ A++ F E+ R + D + + F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA + + + + VT L+ K G A+ + + M+ PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-- 455
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
V T + + +L +E L K G + N + YN+I++ C++G +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-------IFTYNSIVNGLCKSGNIE 508
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSA 291
EA L E + L+ D T+ + A
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDA 535
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I PN ++N+++ +C + A +Y+ + + GP TY +L KG A + EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEA 650
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
L +EM KG Y+ LI GFL+ +A E+FD+++ L D
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I PN+V+++ +I+ EG++ A +LY +I + P TY L GF R+
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRL 377
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA + M++K + + YN LI GF + +D+ ELF E+ +R LV + V T
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ FF A +K ++ +T ++LL+ L +GK A +F+ + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ T+NIM+ GK + F + K +V Y ++S FC
Sbjct: 498 EPDIY-----TYNIMIEGMCKAGKVEDGWDLF----CSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
GL EA+ LF E+ + PD T+ + A
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 11/285 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++R R +EA+AL + P++V+Y V+N C G +D+AL L + +
Sbjct: 196 LFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIE 253
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P V Y + + + +AL+L EM NKG + + YN+LI G A+ L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
++ ER + + V + ++ F G+ EA Y ++ R T + L+
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
H + +A +F+ M+ PN T+N ++ + E + FR+ +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVV-----TYNTLIKGFCKAKRVDEGMELFREM----SQ 424
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ + Y +I F + A+ +F+++ S + PD+ T+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 123/286 (43%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ ++A+ LF +S P+IV ++ +++ + D+ + L + + T
Sbjct: 61 KLDDAVNLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYT 118
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L F ++ AL +L +M+ G+ D + N+L++GF + A L ++
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E D T + F + R EA+ ++ + + VT +++ L K G
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A +L +M P +N +++ N ++AL F T+ ++K
Sbjct: 239 LALSLLKKMEQGKIEPGVV-----IYNTIIDALCNYKNVNDALNLF----TEMDNKGIRP 289
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V YN++I C G S+A L ++ + ++P+V T A + A
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGP 61
++A+ + A +F + ++P+I++Y+ +++ C+ G+V+ AL ++ ++ + P
Sbjct: 442 FQARECDNAQIVFKQMVSDG-VLPDIMTYSILLDGLCNNGKVETALVVFEYL-QRSKMEP 499
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
TY + +G AG++ + DL + KG + + Y ++SGF G ++A+ LF
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
E+KE + D T + +G DK A
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDG-DKAA 589
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 11/273 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P + +YN VIN C G+ + A E++ ++ + P + TYR L G +VE
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ +M ++ D + +++++S F GNLDKA F+ +KE L+ D V+ ++ +
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G AM+ ++ + M VT N +L L K +A LF++M + P
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP--- 478
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+S T I+++ LG A+ F+K K +DV YN ++ F + G +
Sbjct: 479 --DSYTLTILIDGHCKLGNLQNAMELFQKM----KEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
A+ ++ ++ SK + P P ++ + A S+G
Sbjct: 533 TAKEIWADMVSKEILP-TPISYSILVNALCSKG 564
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
++VP++V ++++++ G +D AL +Y + + A P V Y L +G+ G I
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKAL-MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
A++L EML +G D + YN ++ G + L +A++LF+E+ ER L D ++
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
G + AM+ ++ + +++ ++ VT N LL+ K G A ++ M+ P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+++I+VN + G EA + + +K N K M N++I +C +G
Sbjct: 549 -----TPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVMIC---NSMIKGYCRSG 599
Query: 262 LLSEAETLFEELCSKSLSPDVPTH 285
S+ E+ E++ S+ PD ++
Sbjct: 600 NASDGESFLEKMISEGFVPDCISY 623
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 30/303 (9%)
Query: 12 ALFHF-FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 70
AL +F ++ ++P+ V Y +I +C +G + VA+ L R+ + VTY +
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL-RNEMLQQGCAMDVVTYNTIL 452
Query: 71 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 130
G + EA L EM + DS LI G +LGNL A ELF ++KE+ +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 131 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 190
D V T ++ F G A + + ++ ++ TP++ ++L+ L G +A+ +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 191 FDQMLDNHTPPNFQAVNS--------------DTF-NIMVNECFNLGKFHEALATFRKAG 235
+D+M+ + P NS ++F M++E F +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 236 TKSNSKAFAM-------------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
++ SKAF + DV YN+I+ FC + EAE + ++ + ++PD
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 283 PTH 285
T+
Sbjct: 693 STY 695
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I+P +SY+ ++N C +G + A ++ +I+ P+ + + KG+ +G +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCRSGNASDG 604
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER--CLVYDGVVNATYM 140
L +M+++G D + YN LI GF+ N+ KA L +++E LV D + +
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
F + KEA + +++R T ++ + T+A+ + D+ML
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 201 PN 202
P+
Sbjct: 725 PD 726
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 59 FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 118
F ++++ + + +GR+ +A L M+ + + + N+L S F G+ D
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND--- 165
Query: 119 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
+FD L + + + +EA +++ L + F ++ CN L+ L
Sbjct: 166 SVFDLL---------------IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
++ G AW ++ ++ + +N T NIMVN GK E + TF ++
Sbjct: 211 VRIGWVELAWGVYQEISRSGV-----GINVYTLNIMVNALCKDGKM-EKVGTFL---SQV 261
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
K D+ YN +IS + GL+ EA L + K SP V T+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 10/263 (3%)
Query: 19 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 78
T SN N ++ +I T+ ++ A E + ++ + F S L + G
Sbjct: 157 TFSNCGSNDSVFDLLIRTYVQARKLREAHEAF-TLLRSKGFTVSIDACNALIGSLVRIGW 215
Query: 79 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 138
+ A + +E+ G G + N +++ + G ++K +++E+ + D V T
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
+ + + G +EA + ++ + F T N ++ L KHGK +A +F +ML +
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
P +S T+ ++ E G E F + S+ D+ +++++S F
Sbjct: 336 LSP-----DSTTYRSLLMEACKKGDVVETEKVF----SDMRSRDVVPDLVCFSSMMSLFT 386
Query: 259 ENGLLSEAETLFEELCSKSLSPD 281
+G L +A F + L PD
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPD 409
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 12/272 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+++++P++ SYN VI C+ ++ ALEL + + S VT+ L F AG++
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC-SWSLVTWGILIDAFCKAGKM 228
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA+ L+EM G AD +VY +LI GF + G LD+ LFDE+ ER + T
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ F G+ KEA + ++ +++R + T L++ L GK +A L + M++
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
PN AV T+NI++N+ G +A+ + D YN ++ C
Sbjct: 349 EPN--AV---TYNIIINKLCKDGLVADAVEIVELMKKRRTRP----DNITYNILLGGLCA 399
Query: 260 NGLLSEAETLFEELCSKS--LSPDVPTHFACV 289
G L EA L + S PDV ++ A +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 13/281 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ EA +F F + + PN+ +Y +I+ C G+ AL+L +I P+AVT
Sbjct: 297 QLKEASEIFEFMI-ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVT 354
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL-FDEL 124
Y + G + +A++++ M + D++ YN L+ G G+LD+A++L + L
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 125 KERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
K+ V++ + R +A+D Y L+++ VT N+LL LK G
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A L+ Q+ D+ N SDT+ M++ G + A K
Sbjct: 475 VNKAMELWKQISDSKIVRN-----SDTYTAMIDGFCKTGMLNVAKGLL----CKMRVSEL 525
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
V YN ++S C+ G L +A LFEE+ + PDV +
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF-GPSAVTYRHLTKGFISAGRIVEAL 83
P+ ++YN ++ C +G +D A +L ++ + + P ++Y L G R+ +AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
D+ ++ K D + N L++ L+ G+++KA EL+ ++ + +V + ++ F
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
G A + + + + N LL L K G QAW LF++M ++ P+
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 204 QAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
+FNIM++ G A L +AG + D+ Y+ +I+RF +
Sbjct: 565 V-----SFNIMIDGSLKAGDIKSAESLLVGMSRAG-------LSPDLFTYSKLINRFLKL 612
Query: 261 GLLSEAETLFEELCSKSLSPD 281
G L EA + F+++ PD
Sbjct: 613 GYLDEAISFFDKMVDSGFEPD 633
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
S + P++ YN ++++ C EG +D A L+ + F P V++ + G + AG I
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIK 581
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
A LL M G D Y+ LI+ FL+LG LD+A FD++ + D + + +
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKM-TPVTCNVL 174
++ + G + + K L+D+ + +TC V+
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 38/254 (14%)
Query: 65 TYRH--LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
Y H L KG +A+ LLREM D YN +I GF E L+KA EL +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+K + V ++ F G+ EAM K + + V L+ G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSN 239
+ + ALFD++L+ P + T+N ++ LG+ EA F + G + N
Sbjct: 262 ELDRGKALFDEVLERGDSP-----CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 240 SKAFAMDVAG----------------------------YNNIISRFCENGLLSEAETLFE 271
+ + G YN II++ C++GL+++A + E
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 272 ELCSKSLSPDVPTH 285
+ + PD T+
Sbjct: 377 LMKKRRTRPDNITY 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 8 NEAIALFHFFFTQSNIV-PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+EA L + S+ P+++SYN +I+ C E R+ AL++Y ++ G VT
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR-VTT 462
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF----- 121
L + AG + +A++L +++ + +S Y +I GF + G L+ A L
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 122 DELKERCLVYDGVVNATYME------W--FFNNGRDKEAMD--SYKSLMDRQFKMTPV-- 169
EL+ Y+ ++++ E W F RD D S+ ++D K +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 170 ------------------TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
T + L+ LK G +A + FD+M+D+ P+ +S
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A + ++A+ LF ++ + P++ YN +I+ E A+EL+ ++ + P+
Sbjct: 196 KAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ + G GR+ + L + M D Y++LI G + GN+DKA +F+
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
EL ER D V T + F G+ KE+++ ++ +M+ + + V+ N+L++ LL++G
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENG 373
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSK 241
K +A ++ M P A + T+ I ++ C N G ++AL ++ S
Sbjct: 374 KIDEATMIWRLM-----PAKGYAADKTTYGIFIHGLCVN-GYVNKALGVMQEV----ESS 423
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+DV Y +II C+ L EA L +E+
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 13/283 (4%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
AK++ + +LF +F T + + PN+ +YN +I C + + A + + F P
Sbjct: 127 AKQWVKVESLFAYFET-AGVAPNLQTYNVLIKMSCKKKEFEKA-RGFLDWMWKEGFKPDV 184
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
+Y + AG++ +AL+L EM +G D YN LI GFL+ + A EL+D
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 124 LKERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
L E VY V M GR + + ++ + + + T + L+ L G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+A ++F+++ + +++ T+N M+ GK E+L +R K+
Sbjct: 305 NVDKAESVFNELDERKA-----SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN---- 355
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
++++ YN +I ENG + EA ++ + +K + D T+
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++V+YN ++ C G++ +LEL+R I + V+Y L KG + G+I EA +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWR--IMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
R M KG+ AD Y I G G ++KA + E++ D A+ ++
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
R +EA + K + ++ CN L+ L++ + +A +M N P
Sbjct: 442 KKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV- 500
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
++NI++ GKF EA A F K ++ K D+ Y+ ++ C + +
Sbjct: 501 ----SYNILICGLCKAGKFGEASA-FVKEMLENGWKP---DLKTYSILLCGLCRDRKIDL 552
Query: 266 AETLFEELCSKSLSPDVPTH 285
A L+ + L DV H
Sbjct: 553 ALELWHQFLQSGLETDVMMH 572
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 48/263 (18%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P I SYN ++N E + V +E TA P+ TY L K +A
Sbjct: 112 PAIRSYNTLLNAFV-EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L M +G D Y+ +I+ + G LD A ELFDE+ ER + D
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD------------ 218
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTC-NVLLEVLLKHGKKTQAWALFDQML-DNHTPPN 202
VTC N+L++ LK A L+D++L D+ PN
Sbjct: 219 ------------------------VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ T NIM++ G+ + L + + K D+ Y+++I C+ G
Sbjct: 255 VK-----THNIMISGLSKCGRVDDCLKIWERMKQNEREK----DLYTYSSLIHGLCDAGN 305
Query: 263 LSEAETLFEELCSKSLSPDVPTH 285
+ +AE++F EL + S DV T+
Sbjct: 306 VDKAESVFNELDERKASIDVVTY 328
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ V+Y L G AG+ EA ++EML G D Y+ L+ G +D A EL
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
+ + + L D +++ + + G+ +AM ++ R VT N L+E K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 222
G +A ++ M P+ + N+ IM C G
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNT----IMKGLCMCRG 654
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A ++ EA A ++ P++ +Y+ ++ C + ++D+ALEL+ + +
Sbjct: 511 KAGKFGEASAFVKEML-ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG-LETD 568
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
+ + L G S G++ +A+ ++ M ++ A+ + YN L+ GF ++G+ ++A ++
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + I PN+V+++ +I+ EG++ A +LY +I + P T
Sbjct: 308 RWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFT 365
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L GF R+ EA + M++K + + Y+ LI GF + +++ ELF E+
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+R LV + V T + FF A +K ++ +T N+LL+ L K+GK
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A +F+ + + P+ T+NIM+ GK + F K S
Sbjct: 486 KAMVVFEYLQRSTMEPDIY-----TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP---- 536
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V YN +IS FC G EA++L +++ P+ T+ + A
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
+KR ++A+AL + P+ ++ +I+ + A+ L ++ P
Sbjct: 166 SKRISDAVALVDQM-VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDL 223
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + G G I AL LL++M AD ++YN +I G + ++D A LF E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ + + D ++ + N GR +A +++R+ VT + L++ +K GK
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A L+D+M+ P+ T++ ++N + EA F +K F
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAKHMFELMISKD---CF 395
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+V Y+ +I FC+ + E LF E+ + L + T+
Sbjct: 396 P-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 35 NTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 94
N D +VD A++L+ ++ + PF PS V + L + + L +M G
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 95 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 154
D Y+ I+ F L A + ++ + D V ++ + + ++ R +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 155 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 214
+++ +K T L+ L H K ++A AL DQM+ P+ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 215 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 274
VN G AL+ +K DV YN II C+ + +A LF E+
Sbjct: 230 VNGLCKRGDIDLALSLLKKM----EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 275 SKSLSPDVPTHFACVSA 291
+K + PDV T+ + +S
Sbjct: 286 NKGIRPDVFTYSSLISC 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+A+ +F + +S + P+I +YN +I C G+V+ EL+ ++ + P+ + Y
Sbjct: 486 KAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNT 543
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ GF G EA LL++M G +S YN LI L G+ + + EL E++
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + N A+ LF+ T + PN+V+YN ++ C+ GR A L R ++ P+
Sbjct: 200 KNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR-IEPN 257
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+T+ L F+ G+++EA +L M+ D Y +LI+G G LD+A ++F
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ + V+ T + F + R ++ M + + + +T VL++ G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+ A +F+QM PP+ + T+N++++ GK +AL F +
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIR-----TYNVLLDGLCCNGKVEKALMIFEYM----RKRE 428
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+++ Y II C+ G + +A LF L SK + P+V T+ +S
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V++ +++N +C R++ A+ L+ I+ F P+ VTY L + + A++
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +M G + + YN L++G E+G A L ++ +R + + + ++ F
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ EA + Y ++ T L+ L +G +A +F M N P
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP--- 326
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
N + +++ + + + F + + K + Y +I +C G
Sbjct: 327 --NEVIYTTLIHGFCKSKRVEDGMKIFYEM----SQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 265 EAETLFEELCSKSLSPDVPTH 285
A+ +F ++ S+ PD+ T+
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTY 401
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
+EA +F + ++ PN V Y +I+ C RV+ ++++ + ++ + +TY
Sbjct: 310 DEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF-YEMSQKGVVANTITYT 367
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L +G+ GR A ++ +M ++ D YN L+ G G ++KA +F+ +++R
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
+ + V ++ G+ ++A D + SL + K +T ++ + G +A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 188 WALFDQMLDNHTPPN 202
+LF +M ++ PN
Sbjct: 488 DSLFKKMKEDGFLPN 502
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 60/322 (18%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH--IIATAP----- 58
++N+A+ LF S +P+I+ + +++ R DV + L+ I+ P
Sbjct: 63 QFNDALDLFTRM-VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 59 ---------------------------FGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
F P VT+ L G+ RI +A+ L ++L
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDEL-----KERCLVYDGVVNATYMEWFFNN 146
G + + Y LI + +L+ A ELF+++ + + Y+ +V
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG-----LCEI 236
Query: 147 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
GR +A + +M R+ + +T L++ +K GK +A L++ M+ P+
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF-- 294
Query: 207 NSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
T+ ++N G EA F + G N Y +I FC++ +
Sbjct: 295 ---TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI-------YTTLIHGFCKSKRV 344
Query: 264 SEAETLFEELCSKSLSPDVPTH 285
+ +F E+ K + + T+
Sbjct: 345 EDGMKIFYEMSQKGVVANTITY 366
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 25/286 (8%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF--- 59
+AK+ + A LF ++ +PNIV+Y+ +I+ HC G+V+ A +++ + +
Sbjct: 565 KAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 60 ------------GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 107
P+ VTY L GF + R+ EA LL M +G + +VY+ LI G
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 108 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 167
++G LD+A E+ E+ E ++ ++ +F R A +++
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 168 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 227
V +++ L K GK +A+ L M + PN T+ M++ +GK
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV-----TYTAMIDGFGMIGKIETC 798
Query: 228 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
L + G SK A + Y +I C+NG L A L EE+
Sbjct: 799 LELLERMG----SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 28/278 (10%)
Query: 24 VPNIVSYNNVINTHCDEGR------VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+P V YN +I + C + +D+A + Y ++A A + + T+ SAG
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA-AGVVLNKINVSSFTRCLCSAG 462
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ +A ++REM+ +G D+ Y+ +++ ++ A LF+E+K LV D
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQML 195
++ F G ++A + + R+ TP VT L+ LK K + A LF+ ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF-RKAGTKS-----------NSKAF 243
PN T++ +++ G+ +A F R G+K + +
Sbjct: 581 SEGCLPNIV-----TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+V Y ++ FC++ + EA L + + + P+
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 122/296 (41%), Gaps = 22/296 (7%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ ++ EA+ L N VP+ V Y +I+ C+ + A++ + AT+ P+
Sbjct: 282 KVGKWREALTLVE----TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PN 336
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L G ++ ++ +L M+ +G ++N+L+ + G+ A +L
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMD-------SYKSLMDRQFKMTPVTCNVLL 175
++ +C G V + +D D +Y ++ + + +
Sbjct: 397 KMV-KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 176 EVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 235
L GK +A+++ +M+ P+ + T++ ++N N K A F +
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPD-----TSTYSKVLNYLCNASKMELAFLLFEEM- 509
Query: 236 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV Y ++ FC+ GL+ +A F E+ +P+V T+ A + A
Sbjct: 510 ---KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 116/289 (40%), Gaps = 33/289 (11%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN + Y+ +I+ C G++D A E+ + ++ F + TY L + R A
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L +ML + ++Y +I G ++G D+A +L ++E+ + V ++ F
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN-- 202
G+ + ++ + + + VT VL++ K+G A L ++M H P +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 203 -------------------FQAVNSD-------TFNIMVNECFNLGKFHEALATFRKAGT 236
+ D + ++++ + AL + T
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 237 KSNSKAFAMDVAG-YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
S A +D + YN++I C + A LF E+ K + P++ +
Sbjct: 911 FS---ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 22/278 (7%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
++ +PN+V+Y+ ++ ++ ++ + ++ + PS + L + ++G
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHS 389
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGF------LELGNLDKANELFDELKERCLVYDGV 134
A LL++M+ GH +VYN LI L LD A + + E+ +V + +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
+++ + G+ ++A + ++ + F T + +L L K A+ LF++M
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 195 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYN 251
+ T+ IMV+ G +A F R+ G N V Y
Sbjct: 510 KRGGLVADVY-----TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN-------VVTYT 557
Query: 252 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
+I + + +S A LFE + S+ P++ T+ A +
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 11/279 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ EA L+ T+ I PNI++YN +++ +C + R+ A + ++ P VT
Sbjct: 313 KLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVT 370
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ L KG+ R+ + + + R + +G A+++ Y+ L+ GF + G + A ELF E+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
++ D + ++ +NG+ ++A++ ++ L + + V ++E + K GK
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
AW LF + PN T+ +M++ G EA RK N A
Sbjct: 491 DAWNLFCSLPCKGVKPNVM-----TYTVMISGLCKKGSLSEANILLRKMEEDGN----AP 541
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+ YN +I +G L+ + L EE+ S S D +
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 41/294 (13%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ ++N +I EG+V A+ L ++ P VTY + G +G ALD
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LLR+M + AD Y+ +I G +D A LF E++ + + V + +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ + K ++ R+ +T NVLL+V +K GK +A L+ +M+ PN
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 205 AVNS---------------DTFNIMV-NEC--------------FNLGKFHEALATFR-- 232
N+ + ++MV N+C + + + + FR
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 233 -KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
K G +N+ +++ V G FC++G + AE LF+E+ S + PDV T+
Sbjct: 395 SKRGLVANAVTYSILVQG-------FCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 11/282 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R K++N + F + I NI + N +IN C + A + ++ + P
Sbjct: 100 RTKQFNLVLD-FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG-YEPD 157
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ L KG G++ EA+ L+ M+ G D + YN++++G G+ A +L
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+++ER + D +T ++ +G A+ +K + + K + VT N L+ L K G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K L M+ PN TFN++++ GK EA +++ T +
Sbjct: 278 KWNDGALLLKDMVSREIVPNVI-----TFNVLLDVFVKEGKLQEANELYKEMIT----RG 328
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+ ++ YN ++ +C LSEA + + + SPD+ T
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 10/272 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S + PN+ +YN +I C G +DVAL L+ + T P+ VTY L G+ +I
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+ LLR M KG + + YN +I+G G + + + + E+ R D V T
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + G +A+ + ++ + +T L+ + K G +A DQM
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P N T+ +V+ G +EA R+ N F+ V YN +I+ C
Sbjct: 377 CP-----NERTYTTLVDGFSQKGYMNEAYRVLREM----NDNGFSPSVVTYNALINGHCV 427
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G + +A + E++ K LSPDV ++ +S
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 18/271 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVD----VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
PN++SYN VIN C EGR+ V E+ R + VTY L KG+ G
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRR-----GYSLDEVTYNTLIKGYCKEGNFH 327
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
+AL + EML G + Y +LI + GN+++A E D+++ R L + T +
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ F G EA + + D F + VT N L+ GK A A+ + M +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P+ + ++ ++ C + EAL R+ K D Y+++I FCE
Sbjct: 448 PDVVSYST----VLSGFCRSY-DVDEALRVKREMV----EKGIKPDTITYSSLIQGFCEQ 498
Query: 261 GLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
EA L+EE+ L PD T+ A ++A
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 17/270 (6%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN +Y +++ +G ++ A + R + F PS VTY L G G++ +A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG-FSPSVVTYNALINGHCVTGKMEDA 434
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ +L +M KG D + Y+ ++SGF ++D+A + E+ E+ + D + ++ ++
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F R KEA D Y+ ++ T L+ G +A L ++M++ P+
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEA----LATFRKAGTKSNSKAFAM-------DVAGYN 251
T+++++N + EA L F + S+ + +
Sbjct: 555 VV-----TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 252 NIISRFCENGLLSEAETLFEELCSKSLSPD 281
++I FC G+++EA+ +FE + K+ PD
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+YN +IN HC G+++ A+ + + P V+Y + GF + + EAL
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNATY 139
+ REM+ KG D++ Y++LI GF E +A +L++E+ L Y ++NA
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
ME G ++A+ + ++++ VT +VL+ L K + +A L ++ +
Sbjct: 532 ME-----GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 200 PPNFQAVNSD-TFNIMVNECFNL---------------GKFHEALATFRKAGTKSNSKAF 243
P SD T++ ++ C N+ G EA F K++
Sbjct: 587 VP------SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP-- 638
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
D YN +I C G + +A TL++E+ T A V A
Sbjct: 639 --DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 24/244 (9%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +AIA+ + + P++VSY+ V++ C VD AL + R ++ P +T
Sbjct: 430 KMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKPDTIT 487
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L +GF R EA DL EML G D Y LI+ + G+L+KA +L +E+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLE--------- 176
E+ ++ D V + + R +EA L + + VT + L+E
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 177 --VLLK----HGKKTQAWALFDQML-DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
L+K G T+A +F+ ML NH P + +NIM++ G +A
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKP------DGTAYNIMIHGHCRAGDIRKAYT 661
Query: 230 TFRK 233
+++
Sbjct: 662 LYKE 665
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
+R EA L+ + + P+ +Y +IN +C EG ++ AL+L+ ++ P V
Sbjct: 499 RRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL-PDVV 556
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN---------------NLISGFL 109
TY L G R EA LL ++ + + Y+ +LI GF
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 110 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
G + +A+++F+ + + DG + G ++A YK ++ F + V
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 170 TCNVLLEVLLKHGK 183
T L++ L K GK
Sbjct: 677 TVIALVKALHKEGK 690
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+ +A +L T+ I P+++++N +I+ EG+ A ELY +I + P+ T
Sbjct: 227 RWRDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS-IAPNIFT 284
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L GF G + EA + M KG D + Y +LI+GF + +D A ++F E+
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
++ L + + T ++ F G+ A + + ++ R T NVLL L +GK
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 186 QAWALFDQM----LDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNS 240
+A +F+ M +D P N T+N++++ C+N GK +AL F +
Sbjct: 405 KALMIFEDMQKREMDGVAP------NIWTYNVLLHGLCYN-GKLEKALMVFEDMRKREMD 457
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ C+ G + A LF L SK + P+V T+ +S
Sbjct: 458 IGIITYTIIIQGM----CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 45/335 (13%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI------------ 53
++NEA+ LF +S +P+I+ + ++N + DV + L H+
Sbjct: 52 QFNEALDLFTHM-VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 54 ----------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
+ F P VT+ L GF R+ EA+ ++ +M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 151
G D ++Y +I + G+++ A LFD+++ + D V+ + + N+GR ++
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 152 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 211
A + + R+ K +T N L++ +K GK A L+++M+ PN T+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF-----TY 285
Query: 212 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 271
++N G EA F TK F DV Y ++I+ FC+ + +A +F
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKG---CFP-DVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 272 ELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKY 306
E+ K L+ + T+ + G G P A +
Sbjct: 342 EMSQKGLTGNTITYTTLIQGF-GQVGKPNVAQEVF 375
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N A++LF I P++V Y +++N C+ GR A L R + P +T+
Sbjct: 194 NYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG-MTKRKIKPDVITFN 251
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L F+ G+ ++A +L EM+ + Y +LI+GF G +D+A ++F ++ +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
D V + + F + +AM + + + +T L++ + GK A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVN-ECFNLGKFHEALATFRKAGTKSNSKAFAMD 246
+F M+ PPN + T+N++++ C+N GK +AL F K A +
Sbjct: 372 QEVFSHMVSRGVPPNIR-----TYNVLLHCLCYN-GKVKKALMIFEDM-QKREMDGVAPN 424
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
+ YN ++ C NG L +A +FE++ + +
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
YNE I + +I PNI +Y ++IN C EG VD A +++ +++ T P V Y
Sbjct: 270 YNEMIRM--------SIAPNIFTYTSLINGFCMEGCVDEARQMF-YLMETKGCFPDVVAY 320
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L GF ++ +A+ + EM KG +++ Y LI GF ++G + A E+F +
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 127 R--------------CLVYDGVVNATYME----------------WFFN--------NGR 148
R CL Y+G V M W +N NG+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
++A+ ++ + R+ + +T ++++ + K GK A LF + PN
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV---- 496
Query: 209 DTFNIMVNECFNLGKFHEALATFRK 233
T+ M++ F G HEA FRK
Sbjct: 497 -TYTTMISGLFREGLKHEAHVLFRK 520
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+ ++A+ +F + +Q + N ++Y +I G+ +VA E++ H+++ P+
Sbjct: 329 KCKKVDDAMKIF-YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPN 386
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNK---GHGADSLVYNNLISGFLELGNLDKANE 119
TY L G++ +AL + +M + G + YN L+ G G L+KA
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
+F+++++R + + ++ G+ K A++ + SL + K VT ++ L
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 180 KHGKKTQAWALFDQMLDN 197
+ G K +A LF +M ++
Sbjct: 507 REGLKHEAHVLFRKMKED 524
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+YN +++++C GR+ A LY+ I+ P VTY L KG GR+ EA
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYK-IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
M+++G D + YN LI + + G + ++ +L E+ +V D +E F
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
GR A++ L + + C+ L+ L + GK A L D++++
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEG----H 443
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+T+N ++ EAL K K+ ++ +D Y +I C G
Sbjct: 444 EAKPETYNNLIESLSRCDAIEEALVL--KGKLKNQNQ--VLDAKTYRALIGCLCRIGRNR 499
Query: 265 EAETLFEELCSKSLSPD 281
EAE+L E+ + PD
Sbjct: 500 EAESLMAEMFDSEVKPD 516
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 53 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 112
++ P+ T+ LT F + E D L +M +G D + YN L+S + G
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 113 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 172
L +A L+ + R +V D V + ++ +GR +EA ++ ++DR K ++ N
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
Query: 173 VLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
L+ K G Q+ L +ML N P+
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 131 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 190
+D VV ++ + G +E ++ ++D F ++ VTCN LL LLK W +
Sbjct: 164 WDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 191 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 250
+ M PN + TFNI+ N N F E K + F D+ Y
Sbjct: 224 YSVMCRVGIHPN-----TYTFNILTNVFCNDSNFREVDDFLEKM----EEEGFEPDLVTY 274
Query: 251 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
N ++S +C G L EA L++ + + + PD+ T+
Sbjct: 275 NTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTY 309
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 18/291 (6%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
A + ++A+ LF + ++ S+N +++ C RV+ A EL+R + F
Sbjct: 139 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL--RGRFSVDT 195
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + G+ R +AL++L+EM+ +G + YN ++ GF G + A E F E
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+K+R D V T + F G K A + + ++ + T N +++VL K
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF---HEALATFRKAGTKSNS 240
A +F++M+ PN T+N+++ F+ G+F E + G + N
Sbjct: 316 VENAVVMFEEMVRRGYEPNVT-----TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ YN +I + E + +A LFE++ S P++ T+ +S
Sbjct: 371 QT-------YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 52 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 111
H + + GPS T+ + + + SAG+ +A+ L M G D +N ++ +
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 112 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 171
++KA ELF L+ R V N W R +A++ K +++R T
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIK-RTPKALEVLKEMVERGINPNLTTY 233
Query: 172 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 231
N +L+ + G+ AW F +M ++ T+ +V+ G+ A F
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDC-----EIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 232 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ + VA YN +I C+ + A +FEE+ + P+V T+
Sbjct: 289 ----DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 42/287 (14%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+V+Y +I+ C +G + A E+Y ++ P+++ Y + GF G A+
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR-VEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
L +MLN+G D Y +ISG G L +A E+ +++++ LV D V+ T M +F
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+GR K A++ Y L++R F+ V + +++ + K+G+ +A F +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----------CIEK 400
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRK---AG--------------------------- 235
N + ++++ G F E F K AG
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 236 -TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
T+ + +D+ Y +I GL+ EA +F+E+ + +SPD
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 24/283 (8%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+V+Y+ I+T C G + +AL+ + H + P+ VT+ L G+ AG + A+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSF-HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +EM + + Y LI GF + G + +A E++ + E + + +V T ++ FF
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G AM ++++ ++ V++ L +GK +A + + M + P+
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
F M+N F G+ A+ + K + F DV + +I +NG L
Sbjct: 340 -----IFTTMMNAYFKSGRMKAAVNMYHKL----IERGFEPDVVALSTMIDGIAKNGQLH 390
Query: 265 EA--------------ETLFEELCSKSLSPDVPTHFACVSAAG 293
EA L + LC + +V F+ +S AG
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG 433
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 12/260 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF--GPSAVTYRHLTKGFISAGRIVEA 82
P+++SYN++I+ HC G + A + + A+ F P V++ L GF + E
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ ML K + + Y+ I F + G L A + F +K L + V ++
Sbjct: 149 FVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ G + A+ YK + + + VT L++ K G+ +A ++ +M+++ P
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP- 266
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
NS + +++ F G A+ K K ++ +D+ Y IIS C NG
Sbjct: 267 ----NSLVYTTIIDGFFQRGDSDNAM----KFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 263 LSEAETLFEELCSKSLSPDV 282
L EA + E++ L PD+
Sbjct: 319 LKEATEIVEDMEKSDLVPDM 338
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S++VP++V + ++N + GR+ A+ +Y +I F P V + G G++
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG-FEPDVVALSTMIDGIAKNGQL 389
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA ++ + K A+ ++Y LI + G+ + LF ++ E LV D + ++
Sbjct: 390 HEA--IVYFCIEK---ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ G +A ++ + + L+ L G +A +FD+ML++
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Query: 200 PPNFQAVNSDTFNIMV 215
P +S F++++
Sbjct: 505 SP-----DSAVFDLLI 515
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+++ +VP+ Y + I C +G + A +L ++ + Y L G S G
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL-LDLLAYTTLIYGLASKG 487
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 130
+VEA + EMLN G DS V++ LI + + GN+ A++L +++ R LV
Sbjct: 488 LMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 19/272 (6%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
+ I P +YN I CD GR+D A EL + A P V+Y L G+I G+ V
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMGKFV 391
Query: 81 EALDLLREMLNKGHGADSLV-YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA LL + L G S+V YN LI G E GNL+ A L +E+ + + D + T
Sbjct: 392 EA-SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML--DN 197
++ F NG A + Y ++ + K L+ G +A+ L ++M+ D+
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
H P + +N+ ++ +G +A+ RK D Y +I +
Sbjct: 511 HAP------DLTIYNVRIDGLCKVGNLVKAIEFQRKIF----RVGLVPDHVTYTTVIRGY 560
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
ENG A L++E+ K L P V T+F +
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 46/302 (15%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
+I P+IV+YN +I+ C+ G ++ A L + F P +TY L KGF+ G +
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSM 462
Query: 82 ALDLLREMLNKG------------------------------------HGADSLVYNNLI 105
A ++ EML KG H D +YN I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 106 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 165
G ++GNL KA E ++ LV D V T + + NG+ K A + Y ++ ++
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 166 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 225
+ +T VL+ K G+ QA+ +M PN N+ + + + N+ + +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC--KAGNIDEAY 640
Query: 226 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
L + G N ++ M +IS+ C+ E L++E+ K + PD TH
Sbjct: 641 RYLCKMEEEGIPPNKYSYTM-------LISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 286 FA 287
A
Sbjct: 694 RA 695
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 67 RHLTKGFISAGRIVE-ALDLLRE--MLNKG---------HG--ADSLVYNNLISGFLELG 112
+ + KGF+ + R L +LR+ M+NK HG + +N ++ + G
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 113 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 172
+L++ ++++ E+K R + + V + F NG+ +EA + + F +TP + N
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 173 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 232
L+E K G AW + D+ML+ P + T+NI + + G+ +A
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYP-----TTSTYNIYICALCDFGRIDDARELL- 366
Query: 233 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
S A DV YN ++ + + G EA LF++L + + P + T+
Sbjct: 367 -------SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 23/282 (8%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEG---RVD-VALELYRHIIATAPF 59
++ N+A A++ + I+P ++++N ++++ G RVD + LE+ R I
Sbjct: 216 SRMMNKASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF--- 271
Query: 60 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE 119
S VTY L GF G++ EA +M G +N LI G+ + G D A
Sbjct: 272 --SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
+ DE+ + Y+ + GR +D + L+ V+ N L+ +
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGR----IDDARELLSSMAAPDVVSYNTLMHGYI 385
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
K GK +A LFD + P+ T+N +++ G A ++ +
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIV-----TYNTLIDGLCESGNLEGA----QRLKEEMT 436
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
++ DV Y ++ F +NG LS A +++E+ K + PD
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 10/267 (3%)
Query: 19 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 78
++ ++PN +SY +I +C D+A +L + A P VTY L G + +G
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM-AERGCKPDIVTYGILIHGLVVSGH 430
Query: 79 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 138
+ +A+++ +++++G D+ +YN L+SG + G A LF E+ +R ++ D V AT
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
++ F +G EA + +++ K+ V N +++ + G +A A ++M + H
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
P + T++ +++ A+ FR K+ K +V Y ++I+ FC
Sbjct: 551 LVP-----DKFTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKP---NVVTYTSLINGFC 601
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTH 285
G AE F+E+ + L P+V T+
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTY 628
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 31 NNVINTHCDEG-RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
NN+I+ G +VD A E IIA P TY L G+ A+ L E
Sbjct: 314 NNIIDAKYRHGYKVDPA-ESIGWIIAN-DCKPDVATYNILINRLCKEGKKEVAVGFLDEA 371
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
KG ++L Y LI + + D A++L ++ ER D V + +G
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 209
+A++ L+DR N+L+ L K G+ A LF +MLD + P ++
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP-----DAY 486
Query: 210 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 269
+ +++ G F EA RK + S K +DV +N +I FC +G+L EA
Sbjct: 487 VYATLIDGFIRSGDFDEA----RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 270 FEELCSKSLSPDVPTH 285
+ + L PD T+
Sbjct: 543 MNRMNEEHLVPDKFTY 558
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 122/281 (43%), Gaps = 16/281 (5%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
++A+ ++ + + VP++++ N++++ R+ A ++Y + G S Y
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR---GDSVDNYS 207
Query: 68 H--LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
L KG + G++ L+ KG + + YN +I G+ +LG+++ A +F ELK
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS-LMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ + T + F G D A D S + +R +++ N +++ +HG K
Sbjct: 268 LKGFMPTLETFGTMINGFCKEG-DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
++ N P+ T+NI++N GK A+ +A + K
Sbjct: 327 VDPAESIGWIIANDCKPDVA-----TYNILINRLCKEGKKEVAVGFLDEA----SKKGLI 377
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ Y +I +C++ A L ++ + PD+ T+
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 126/323 (39%), Gaps = 24/323 (7%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ + R+ A LF + NI+P+ Y +I+ G D A +++ +
Sbjct: 460 LCKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG-VK 517
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
V + + KGF +G + EAL + M + D Y+ +I G+++ ++ A ++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F +++ + V + + F G K A +++K + R VT L+ L K
Sbjct: 578 FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 181 HG----KKTQAWALFDQMLDNHTPPN-------FQAVNSDTFNIMVNECFNLGKFHEALA 229
K W L M+ N PN Q T ++ E G H +
Sbjct: 638 ESSTLEKAVYYWEL---MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE--PDGSNHGQSS 692
Query: 230 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
F + + S ++ A YN+ + C +G++ A +++ K SPD P FA +
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD-PVSFAAI 751
Query: 290 SAAGGSRGPPTTATSKYWNASTF 312
G SK W F
Sbjct: 752 -----LHGFCVVGNSKQWRNMDF 769
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++PN+++YN +IN +C G ++ A+++ ++ + P+ TY L KG+ + +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGYCKSN-V 443
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+A+ +L +ML + D + YN+LI G GN D A L + +R LV D +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + R +EA D + SL + V L++ K GK +A + ++ML +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 200 PPNFQAVNS------------------------------DTFNIMVNECFNLGKFHEALA 229
PN N+ T I+++ G F A +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 230 TFRK---AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHF 286
F++ +GTK D Y I +C G L +AE + ++ +SPD+ T+
Sbjct: 624 RFQQMLSSGTKP-------DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 287 ACVSAAG 293
+ + G
Sbjct: 677 SLIKGYG 683
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)
Query: 27 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 86
I YN ++N+ G VD ++Y ++ P+ TY + G+ G + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 87 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 146
+++ G D Y +LI G+ + +LD A ++F+E+ + + V +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 147 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
R EAMD + + D + T T VL++ L +K++A L +M + PN
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH-- 359
Query: 207 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
T+ ++++ + KF +A R+ + K +V YN +I+ +C+ G++ +A
Sbjct: 360 ---TYTVLIDSLCSQCKFEKA----RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 267 ETLFEELCSKSLSPDVPTH 285
+ E + S+ LSP+ T+
Sbjct: 413 VDVVELMESRKLSPNTRTY 431
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 11/238 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++P++V+YN++I+ C G D A L ++ P TY + + R+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE-LKERCLVYDGVVNAT 138
EA DL + KG + ++Y LI G+ + G +D+A+ + ++ L + CL NA
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA- 572
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
+ +G+ KEA + ++ + T T +L+ LLK G A++ F QML +
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNI 253
T P ++ T+ + G+ +A +A R+ G + ++ + GY ++
Sbjct: 633 TKP-----DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ + PNI +YN ++N +C G V+ A + Y I A P TY L G+ +
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
A + EM KG + + Y +LI G +D+A +LF ++K+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + R EA++ K + + K T VL++ L K +A L QML+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
PN T+N ++N G +A+ S+ + + YN +I +C+
Sbjct: 390 MPNVI-----TYNALINGYCKRGMIEDAVDVVELM----ESRKLSPNTRTYNELIKGYCK 440
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTH 285
+ + +A + ++ + + PDV T+
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTY 465
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N V+Y ++I+ C R+D A++L+ + F P+ TY L K + R EAL+L
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNL 345
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
++EM G + Y LI +KA EL ++ E+ L+ + + + +
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
G ++A+D + + R+ T N L++ K +A + ++ML+ P+
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVV- 463
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
T+N +++ G F A + N + D Y ++I C++ + E
Sbjct: 464 ----TYNSLIDGQCRSGNFDSAYRLL----SLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 266 AETLFEELCSKSLSPDVPTHFACVSA 291
A LF+ L K ++P+V + A +
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDG 541
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+ +A F ++ + P+ +++N+++ G + A L+ + +Y
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNT 379
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L G++ A ++L +M K + + Y+ +I GF + G D+A LF E++
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
+ D V T + + GR +EA+D + + K VT N LL K GK +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
+F +M H PN T++ +++ G + EA+ FR+ S DV
Sbjct: 500 KVFTEMKREHVLPNLL-----TYSTLIDGYSKGGLYKEAMEIFREF----KSAGLRADVV 550
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
Y+ +I C+NGL+ A +L +E+ + +SP+V T+ + + A G S
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 13/281 (4%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I+PN+VSY+ VI+ GR D AL L+ + V+Y L + GR EA
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEA 463
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
LD+LREM + G D + YN L+ G+ + G D+ ++F E+K ++ + + +T ++
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ G KEAM+ ++ + V + L++ L K+G A +L D+M PN
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 203 FQAVNS--DTFNIMVN-----ECFNLGKF---HEALATFRKAGTKSNSKAFAMDVAGYNN 252
NS D F + N G AL+ + + F NN
Sbjct: 584 VVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNN 643
Query: 253 IISRFCENGL--LSEAETLFEELCSKSLSPDVPTHFACVSA 291
++ CE G+ LS +F ++ + P+V T A ++A
Sbjct: 644 RTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 130/301 (43%), Gaps = 42/301 (13%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++PN V +IN +C +G+V A YR ++ G A TY L G ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKV 608
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+A ++ REM KG D Y LI+GF +LGN+ KA+ +FDE+ E L + ++
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNH 198
+ F +G ++A + + + VT +++ K G +A+ LFD+M L
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATF--RKAGTKSNSKAF------------- 243
P +F + +V+ C L A+ F K G S++ F
Sbjct: 729 VPDSF------VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 244 -------------AMDVAG------YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+ D G YN +I C+ G L A+ LF ++ + +L P V T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 285 H 285
+
Sbjct: 843 Y 843
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ + PN++ YN ++ C G ++ A EL + + P+AVTY + G+ +G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSG 711
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ EA L EM KG DS VY L+ G L ++++A +F K+ C NA
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQF----KMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
+ W F G+ + + LMD F K VT N++++ L K G A LF Q
Sbjct: 772 -LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M + + P T+ ++N +G+ E F +A + D Y+ I
Sbjct: 831 MQNANLMPTVI-----TYTSLLNGYDKMGRRAEMFPVFDEA----IAAGIEPDHIMYSVI 881
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPD 281
I+ F + G+ ++A L +++ +K+ D
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDD 909
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+V Y +I T R A+ + + + P Y L G A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM+ G ++ Y ISG++E A++ E++E ++ + V+ + +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ EA +Y+S++D+ T VL+ L K+ K A +F +M P+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
++ +++N LG +A + F + + +V YN ++ FC +G +
Sbjct: 629 -----SYGVLINGFSKLGNMQKASSIF----DEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 265 EAETLFEELCSKSLSPDVPTH 285
+A+ L +E+ K L P+ T+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTY 700
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 60/327 (18%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRV----DVALELYRHIIAT 56
M + +A ALF S ++P +Y ++I +C E V ++ +E+ + I
Sbjct: 357 MSKEGVMEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 57 APFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDK 116
+P+ TY + KG S+G + A ++++EM+ G + ++Y LI FL+
Sbjct: 416 SPY-----TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 117 ANELFDELKERCLVYD---------GVVNATYME-------WFFNNGRDKEAM------- 153
A + E+KE+ + D G+ A M+ NG A
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 154 -----------DSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
D Y M R+ + P V C L+ K GK +A + + M+D
Sbjct: 531 GYIEASEFASADKYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD---- 585
Query: 201 PNFQAVNSD--TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
Q + D T+ +++N F K +A FR+ K A DV Y +I+ F
Sbjct: 586 ---QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM----RGKGIAPDVFSYGVLINGFS 638
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTH 285
+ G + +A ++F+E+ + L+P+V +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIY 665
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN V+YN +I+ C EG ++ A EL+ H + A P+ +TY L G+ GR E
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELF-HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
+ E + G D ++Y+ +I+ FL+ G KA L D++ + V DG
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 20/274 (7%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV--TYRHLTKGFISAGRIV 80
+VP +Y+ +I+ C R++ A L ++ G S TY L G +
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
A L+ EM++ G +Y+ I + G ++KA LFD + L+ A+ +
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 141 EWFFNNGRDKEAMDSYKSLMD---RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
E + R+K Y+ L++ R ++P T +++ + G A+ + +M+ +
Sbjct: 390 EGYC---REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
PN + ++ +F +A+ ++ + A D+ YN++I
Sbjct: 447 GCRPNVV-----IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGL 497
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ + EA + E+ L P+ T+ A +S
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
VS N +++ C EGRV+ AL + + F P T+ L G AG + A++++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
ML +G+ D YN++ISG +LG + +A E+ D++ R + V T +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+ +EA + + L + T N L++ L A LF++M P +
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-----D 434
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
T+N++++ + GK EAL ++ +++ V YN +I FC+ EAE
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS----VITYNTLIDGFCKANKTREAE 490
Query: 268 TLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+F+E+ +S + T+ + SR
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A AI + Q P++ +YN+VI+ C G V A+E+ +I T P+
Sbjct: 307 KAGHVKHAIEIMDVML-QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDCSPN 364
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L ++ EA +L R + +KG D +N+LI G N A ELF+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E++ + D ++ + G+ EA++ K + + +T N L++ K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K +A +FD+M + + NS T+N +++ + +A + +
Sbjct: 485 KTREAEEIFDEMEVHGV-----SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP- 538
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
D YN++++ FC G + +A + + + S PD+ T+ +S
Sbjct: 539 ---DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
T I+P++ ++N++I C VA+EL+ + + P TY L S G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKG 449
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
++ EAL++L++M G + YN LI GF + +A E+FDE++ + + V
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
T ++ + R ++A ++ K T N LL + G +A + M N
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
P+ T+ +++ G+ A R K + YN +I
Sbjct: 570 GCEPDIV-----TYGTLISGLCKAGRVEVASKLLRSI----QMKGINLTPHAYNPVIQGL 620
Query: 258 CENGLLSEAETLFEELCSKSLSP 280
+EA LF E+ ++ +P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAP 643
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 11/278 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
+E +++ + + + P+ YN ++N D + + +E+ ++ P T+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL-VEISHAKMSVWGIKPDVSTFN 193
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L K A ++ A+ +L +M + G D + ++ G++E G+LD A + +++ E
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQ 186
+ V + F GR ++A++ + + ++ F T N L+ L K G
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 246
A + D ML P+ T+N +++ LG+ EA+ + T+ S +
Sbjct: 314 AIEIMDVMLQEGYDPDVY-----TYNSVISGLCKLGEVKEAVEVLDQMITRDCSP----N 364
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
YN +IS C+ + EA L L SK + PDV T
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
S ++++YN +I+ C + A E++ + ++VTY L G + R+
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
+A L+ +M+ +G D YN+L++ F G++ KA ++ + D V T +
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD-NHT 199
GR + A +S+ + +TP N +++ L + K T+A LF +ML+ N
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 200 PPN 202
PP+
Sbjct: 643 PPD 645
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 10/301 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + ++A L + + + +SYN++I+ EG +D A+ Y + P+
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG-ISPN 618
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY L G R+ +AL++ EM NKG D Y LI GF + N++ A+ LF
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
EL E L + + + F N G A+D YK ++ + T L++ LLK G
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A L+ +M P + + ++VN G+F + + F + K N+
Sbjct: 739 NLILASELYTEMQAVGLVP-----DEIIYTVIVNGLSKKGQFVKVVKMFEE--MKKNN-- 789
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTA 302
+V YN +I+ G L EA L +E+ K + PD T VS G+ P A
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAA 849
Query: 303 T 303
+
Sbjct: 850 S 850
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 56/275 (20%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I PN+VSYNNV+ HC + +D+A ++ +I+ P+ TY L G A
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFRNHDEQNA 532
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER------CLVYDGVVN 136
L+++ M + + +VY +I+G ++G KA EL + E C+ Y+ +++
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
FF G A+ +Y+ + +T L+ L K+ + QA + D+M
Sbjct: 593 G-----FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-- 645
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
+K +D+ Y +I
Sbjct: 646 ------------------------------------------KNKGVKLDIPAYGALIDG 663
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
FC+ + A LF EL + L+P P + + +S
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 18/261 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ + Y+ + C + +A L R + PS TY + + G + +A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EML+ G + + +LI+G + +L A LFD++++ + V + +EWF
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNV--LLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
NG ++A++ YK + +TP +V +++ LK K +A LFD+ +
Sbjct: 386 KNGEMEKALEFYKKM--EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE--------S 435
Query: 203 FQAVNSDTF--NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
F+ ++ F N +++ GK EA +K S+ +V YNN++ C
Sbjct: 436 FETGLANVFVCNTILSWLCKQGKTDEATELL----SKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 261 GLLSEAETLFEELCSKSLSPD 281
+ A +F + K L P+
Sbjct: 492 KNMDLARIVFSNILEKGLKPN 512
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
G+ EA +LL +M ++G G + + YNN++ G N+D A +F + E+ L +
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+ ++ F N ++ A++ + ++ V ++ L K G+ ++A L M++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
V+ ++N +++ F G+ A+A + + + +V Y ++++
Sbjct: 577 EKR----LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC----GNGISPNVITYTSLMNG 628
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
C+N + +A + +E+ +K + D+P + A +
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 47/300 (15%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
+++P N ++ + A ELY ++A G + VT + L + + + E
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDN-VTTQLLMRASLREEKPAE 251
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL------VYDGVV 135
AL++L + +G DSL+Y+ + + +L AN L E+KE+ L Y V+
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 136 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
A+ + G +A+ ++ M V L+ K+ A LFD+M
Sbjct: 312 LASVKQ-----GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK---------------------A 234
P NS TF++++ G+ +AL ++K
Sbjct: 367 KEGPSP-----NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 235 GTKSNS------KAFAMDVAGY---NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
G K ++F +A N I+S C+ G EA L ++ S+ + P+V ++
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 54/310 (17%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++VSY+ +I+ EG V+ AL L +I P+ +TY + +G G++ EA L
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEG-VEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER-----CLVYDGVVNATYM 140
+L+ G D +Y LI G GNL++A + ++++R L Y+ V+N M
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCM 394
Query: 141 EWFFNNGRDKEA-----------------MDSY-------------KSLMDRQFKMTPVT 170
GR EA +DSY + ++ + M V
Sbjct: 395 A-----GRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM 449
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
CN+LL+ L G +A AL+ M + P ++ T+ M+ G+ EAL
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEMDLTP-----DTATYATMIKGYCKTGQIEEALEM 504
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH---FA 287
F + S S A YN II C+ G+L A + EL K L D+ T
Sbjct: 505 FNELRKSSVSAAVC-----YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLH 559
Query: 288 CVSAAGGSRG 297
+ A GG +G
Sbjct: 560 SIHANGGDKG 569
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
VI+ C G+ ++AL + + + P+ VTY L G++ E DL+R + ++
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
G D + Y+N I G+ + G L A E+ E+ + D V + ++ G +EA
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
+ ++ + +T ++ L K GK +A+ LF+++L V+ +
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIE-----VDEFLYV 351
Query: 213 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
+++ G + A + + + YN +I+ C G +SEA+ +
Sbjct: 352 TLIDGICRKGNLNRAFSML----GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV--- 404
Query: 273 LCSKSLSPDVPTH 285
SK + DV T+
Sbjct: 405 --SKGVVGDVITY 415
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 122/302 (40%), Gaps = 32/302 (10%)
Query: 10 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
A+ F +VPN+V+Y +++ C G+VD +L R + F V Y +
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR-LEDEGFEFDCVFYSNW 248
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 129
G+ G +V+AL REM+ KG D + Y+ LI G + GN+++A L ++ + +
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 130 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 189
+ + + G+ +EA + ++ ++ L++ + + G +A++
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 190 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA-------------LATFRKAGT 236
+ M P+ T+N ++N G+ EA +T +
Sbjct: 369 MLGDMEQRGIQPSIL-----TYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYI 423
Query: 237 KSNS-------------KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 283
K + MD+ N ++ F G EA+ L+ + L+PD
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 284 TH 285
T+
Sbjct: 484 TY 485
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 47/303 (15%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
F ++ I ++V N ++ G A LYR + P TY + KG+ G
Sbjct: 438 FLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM-PEMDLTPDTATYATMIKGYCKTG 496
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+I EAL++ E L K + ++ YN +I + G LD A E+ EL E+ L D +
Sbjct: 497 QIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 138 TYMEWFFNNGRDK---------EAMDSYKSL------------------------MDRQF 164
T + NG DK E ++S L + R+
Sbjct: 556 TLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRK 615
Query: 165 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 224
+T + +L+ L+ + + A+ L + N +++ + I++N G
Sbjct: 616 GLTVTFPSTILKTLVDNLRSLDAYLL----VVNAGETTLSSMDVIDYTIIINGLCKEGFL 671
Query: 225 HEAL--ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
+AL +F K S+ ++ YN++I+ C+ G L EA LF+ L + L P
Sbjct: 672 VKALNLCSFAK------SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE 725
Query: 283 PTH 285
T+
Sbjct: 726 VTY 728
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
F + N ++YN++IN C +G + AL L+ + PS VTY L
Sbjct: 680 FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCKE 738
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
G ++A LL M++KG + ++YN+++ G+ +LG + A + + D
Sbjct: 739 GLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
++ ++ + G +EA+ + D+ L++ G+ +A L +ML
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 13/257 (5%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
+++ Y +IN C EG + AL L + + +TY L G G +VEAL L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLC-SFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
+ N G + Y LI + G A +L D + + LV + ++ + ++ +
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
G+ ++AM M + T + +++ K G +A ++F + D + +F
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN-------SKAFAMDVAGYNNIISRFC 258
F ++ G+ EA R+ + A + + C
Sbjct: 833 -----FLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELC 887
Query: 259 ENGLLSEAETLFEELCS 275
E G + +A + +E+ S
Sbjct: 888 EQGRVPQAIKILDEISS 904
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R ++ +A+ LF +I P++VS+N++++ +C G VD+A + ++ PS
Sbjct: 199 RQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPS 256
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
++ L G G I EAL+L +M G DS+ YN L GF LG + A E+
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT-CNVLLEVLLKH 181
++ ++ L D + + G + K ++ R F++ + C+V+L L K
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS--- 238
G+ +A +LF+QM + P+ A ++I+++ LGKF AL + + K
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
NS+ + G C+ G+L EA +L + L S + D+
Sbjct: 432 NSRTHGALLLG-------LCQKGMLLEARSLLDSLISSGETLDI 468
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 13/272 (4%)
Query: 16 FFFT--QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FF T + +VP++ S+N +IN C G + ALEL + P +VTY L KGF
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGF 302
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G I A +++R+ML+KG D + Y L+ G +LGN+D L ++ R +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 134 VVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 192
++ + M GR EA+ + + V ++++ L K GK A L+D
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 252
+M D P NS T ++ G EA R S +D+ YN
Sbjct: 423 EMCDKRILP-----NSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGETLDIVLYNI 473
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+I + ++G + EA LF+ + ++P V T
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++++Y ++ C G +D+ L L + +++ S + + G GRI EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +M G D + Y+ +I G +LG D A L+DE+ ++ ++ + + +
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA SL+ + V N++++ K G +A LF +++ P+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
NS + + N+ + + L + G A V Y ++ + G
Sbjct: 505 TFNSLIYGYCKTQ--NIAEARKILDVIKLYG-------LAPSVVSYTTLMDAYANCGNTK 555
Query: 265 EAETLFEELCSKSLSP 280
+ L E+ ++ + P
Sbjct: 556 SIDELRREMKAEGIPP 571
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 123/318 (38%), Gaps = 46/318 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI--------- 53
+ R +EA++LF+ + P++V+Y+ VI+ C G+ D+AL LY +
Sbjct: 375 KTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 54 -------------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 88
+ ++ V Y + G+ +G I EAL+L +
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
++ G +N+LI G+ + N+ +A ++ D +K L V T M+ + N G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
K + + + T VT +V+ + L + K + + + + + S
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 209 D-------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+ T+N ++ + A S+ A YN +I C G
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILIDSLCVYG 669
Query: 262 LLSEAETLFEELCSKSLS 279
+ +A++ L +++S
Sbjct: 670 YIRKADSFIYSLQEQNVS 687
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 13/272 (4%)
Query: 16 FFFT--QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FF T + +VP++ S+N +IN C G + ALEL + P +VTY L KGF
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGF 302
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G I A +++R+ML+KG D + Y L+ G +LGN+D L ++ R +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 134 VVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 192
++ + M GR EA+ + + V ++++ L K GK A L+D
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 252
+M D P NS T ++ G EA R S +D+ YN
Sbjct: 423 EMCDKRILP-----NSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGETLDIVLYNI 473
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+I + ++G + EA LF+ + ++P V T
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R ++ +A+ LF +I P++VS+N++++ +C G VD+A + ++ PS
Sbjct: 199 RQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPS 256
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
++ L G G I EAL+L +M G DS+ YN L GF LG + A E+
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT-CNVLLEVLLKH 181
++ ++ L D + + G + K ++ R F++ + C+V+L L K
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS--- 238
G+ +A +LF+QM + P+ A ++I+++ LGKF AL + + K
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
NS+ + G C+ G+L EA +L + L S + D+
Sbjct: 432 NSRTHGALLLG-------LCQKGMLLEARSLLDSLISSGETLDI 468
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++++Y ++ C G +D+ L L + +++ S + + G GRI EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +M G D + Y+ +I G +LG D A L+DE+ ++ ++ + + +
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA SL+ + V N++++ K G +A LF +++ P+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
NS + + N+ + + L + G A V Y ++ + G
Sbjct: 505 TFNSLIYGYCKTQ--NIAEARKILDVIKLYG-------LAPSVVSYTTLMDAYANCGNTK 555
Query: 265 EAETLFEELCSKSLSP 280
+ L E+ ++ + P
Sbjct: 556 SIDELRREMKAEGIPP 571
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 123/318 (38%), Gaps = 46/318 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI--------- 53
+ R +EA++LF+ + P++V+Y+ VI+ C G+ D+AL LY +
Sbjct: 375 KTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 54 -------------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 88
+ ++ V Y + G+ +G I EAL+L +
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
++ G +N+LI G+ + N+ +A ++ D +K L V T M+ + N G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
K + + + T VT +V+ + L + K + + + + + S
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 209 D-------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+ T+N ++ + A S+ A YN +I C G
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILIDSLCVYG 669
Query: 262 LLSEAETLFEELCSKSLS 279
+ +A++ L +++S
Sbjct: 670 YIRKADSFIYSLQEQNVS 687
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P++ YN +I+ C R++ A +L+ ++A PS +TY L G+ AG ++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKS 268
Query: 83 LDLLREMLNKGHGADSLV-YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
+ RE + H SL+ +N L+ G + G ++ A + E+K+ V D + +
Sbjct: 269 FKV-RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
+ +N + + A+ Y++ +D KM TC++LL L K GK +A + + + P
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
N +N M++ G A + K G K + A YN +I RFC
Sbjct: 388 -----NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA-------YNCLIRRFC 435
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
E G + AE ++ K +SP V T+ + G
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 20/280 (7%)
Query: 19 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 78
S + N + + ++N C EG+++ A E+ +A P+ V Y + G+ G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRKGD 404
Query: 79 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA- 137
+V A + M +G D L YN LI F ELG ++ A + +++K + GV +
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-----GVSPSV 459
Query: 138 -TYMEWFFNNGRDKE---AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
TY GR E D K + D V+ L+ L K K +A +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M D P + +N++++ C + GK +A F K K K +++ YN +
Sbjct: 520 MEDRGVSPKVR-----IYNMLIDGCCSKGKIEDAF-RFSKEMLK---KGIELNLVTYNTL 570
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
I G LSEAE L E+ K L PDV T+ + +S G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 51/292 (17%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P + YN +I+ C +G+++ A + ++ + VTY L G G++ EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEA 583
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK----------------- 125
DLL E+ KG D YN+LISG+ GN+ + L++E+K
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 126 ---------ERC----------LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 166
ER LVY+GV++ + +G ++A + K ++++ +
Sbjct: 644 CTKEGIELTERLFGEMSLKPDLLVYNGVLHC-----YAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 167 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 226
T N L+ LK GK + +L D+M P +DT+NI+V + +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE-----ADTYNIIVKGHCEVKDYMS 753
Query: 227 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
A +R+ K F +DV N ++S E EAE + E+ + L
Sbjct: 754 AYVWYREM----QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 19/282 (6%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
+K +EA LF F I P+ S +++ + V + ++ +I+ + F PS
Sbjct: 122 SKMISEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES-DFRPSK 179
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
Y + + + + L+L M + +YN LI G + ++ A +LFDE
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ R L+ + T ++ + G +++ + + + + +T N LL+ L K G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 184 KTQAWALFDQMLD-NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSN 239
A + +M D P F TF+I+ + + K AL + A G K N
Sbjct: 300 VEDAENVLKEMKDLGFVPDAF------TFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+ ++ +++ C+ G + +AE + +K L P+
Sbjct: 354 AYTCSI-------LLNALCKEGKIEKAEEILGREMAKGLVPN 388
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
E I L F + ++ P+++ YN V++ + G ++ A L + +I + G TY
Sbjct: 646 KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS-IGLDKTTYN 704
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L G + G++ E L+ EM + ++ YN ++ G E+ + A + E++E+
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEA 152
+ D + + R KEA
Sbjct: 765 GFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 117/290 (40%), Gaps = 33/290 (11%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P++ +YN +I + + D ++ + + P+ V+Y L +++EA
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEA 513
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ R+M ++G +YN LI G G ++ A E+ ++ + + V T ++
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G+ EA D + + K T N L+ G + AL+++M + P
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 203 FQAVNSDTFNIMVNECFNLG------------------KFHEALATFRKAGTKSNS---- 240
+ T++++++ C G ++ L + G +
Sbjct: 634 LK-----TYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 241 -----KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
K+ +D YN++I + G L E +L +E+ ++ + P+ T+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N A+ +F + + I + V+YN +I+ + GR A L R ++ P+ + +
Sbjct: 201 NNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFT 258
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L F+ G ++EA +L +EM+ + + YN+LI+GF G L A +FD + +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
D V T + F + R ++ M + + + T N L+ + GK A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
+F++M+D P+ T+NI+++ N GK +AL +D+
Sbjct: 379 QKVFNRMVDCGVSPDIV-----TYNILLDCLCNNGKIEKALVMVEDL----QKSEMDVDI 429
Query: 248 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
YN II C L EA LF L K + PD + +S
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 127/314 (40%), Gaps = 44/314 (14%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI------------ 53
++++A +LF QS +P+IV + V+ + D+ + LY +
Sbjct: 59 KFDDAFSLFCEML-QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 54 ----------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
+ F PS VT L GF R EA+ L+ M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 151
G + ++YN +I+G + +L+ A E+F ++++ + D V T + N+GR +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 152 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 211
A + ++ R+ + L++ +K G +A L+ +M+ PN NS
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 212 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 271
++ C K+ L SK DV YN +I+ FC++ + + LF
Sbjct: 298 GFCIHGCLGDAKYMFDLMV---------SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 272 ELCSKSLSPDVPTH 285
E+ + L D T+
Sbjct: 349 EMTYQGLVGDAFTY 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+YN +I C RV+ ++L+ + G A TY L G+ AG++ A
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-DAFTYNTLIHGYCQAGKLNVAQK 380
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ M++ G D + YN L+ G ++KA + ++L++ + D + ++
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ KEA ++SL + K + ++ L + G + +A L +M ++ P+
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + NI P++V +N +I+ EG++ A +LY ++ + P V
Sbjct: 300 RWSDASRLLSDML-EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L KGF R+ E +++ REM +G +++ Y LI GF + + D A +F ++
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ D + ++ NNG + A+ ++ + R K+ VT ++E L K GK
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
W LF + PN
Sbjct: 479 DGWDLFCSLSLKGVKPN------------------------------------------- 495
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
V Y ++S FC GL EA+ LF E+ P+ T+ + A
Sbjct: 496 -VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA+AL + P+ V++ +++ + A+ L ++ P VT
Sbjct: 160 RISEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVT 217
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G G AL+LL +M AD ++YN +I G + ++D A +LF++++
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ + D + N GR +A ++++ V N L++ +K GK
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 186 QAWALFDQMLDN-HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSK 241
+A L+D+M+ + H P+ A +N ++ + E + FR + G N+
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVA-----YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ + G+ +R C+N A+ +F+++ S + PD+ T+
Sbjct: 393 TYTTLIHGFFQ--ARDCDN-----AQMVFKQMVSDGVHPDIMTY 429
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I N+ +Y+ IN C ++ +AL + ++ +GPS VT L GF RI EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEA 164
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ L+ +M+ G+ D++ + L+ G + +A L + + + D V +
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G A++ + + + V N +++ L K+ A+ LF++M P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
T+N +++ N G++ +A + + K D+ +N +I F + G
Sbjct: 285 VF-----TYNPLISCLCNYGRWSDA----SRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 263 LSEAETLFEELC-SKSLSPDVPTH 285
L EAE L++E+ SK PDV +
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAY 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 11/286 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ ++AI LF +S P+IV ++ +++ + D+ + L + + T
Sbjct: 55 KLDDAIGLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYT 112
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y F ++ AL +L +M+ G+G + N+L++GF + +A L D++
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E D V T + F + + EA+ + ++ + + VT ++ L K G+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A L ++M + +N +++ +A F K TK
Sbjct: 233 LALNLLNKMEKGKIEADVV-----IYNTIIDGLCKYKHMDDAFDLFNKMETK----GIKP 283
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV YN +IS C G S+A L ++ K+++PD+ A + A
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 9/287 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ +A R +AI + + S I+P+ +Y ++N C G V A++L + +
Sbjct: 116 LCKANRLKKAIRVIELMVS-SGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM-EDHGYP 173
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
+ VTY L +G G + ++L + ++ KG ++ Y+ L+ + D+A +L
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
DE+ + + V + F GR +AM ++ L + FK V+ N+LL L
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
G+ +A +L +M P+ T+NI++N G+ +AL ++ +K N
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVV-----TYNILINSLAFHGRTEQALQVLKEM-SKGNH 347
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFA 287
+ F + YN +I+R C+ G + +E+ + P+ T+ A
Sbjct: 348 Q-FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 45/261 (17%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+ ++ C R+ A+ + ++++ P A Y +L G + A+
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII-PDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L+ +M + G+ ++++ YN L+ G LG+L+++ + + L ++ L +
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAF---------- 212
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
T + LLE K +A L D+++ PN
Sbjct: 213 -------------------------TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
++N+++ G+ +A+A FR+ +K F +V YN ++ C +G
Sbjct: 248 -----SYNVLLTGFCKEGRTDDAMALFRELP----AKGFKANVVSYNILLRCLCCDGRWE 298
Query: 265 EAETLFEELCSKSLSPDVPTH 285
EA +L E+ +P V T+
Sbjct: 299 EANSLLAEMDGGDRAPSVVTY 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 121/321 (37%), Gaps = 47/321 (14%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA---- 57
Y+ + +EA+ L + PN+VSYN ++ C EGR D A+ L+R + A
Sbjct: 222 YKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 58 ------------------------------PFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
PS VTY L GR +AL +L+
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 88 EMLNKGHG--ADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFF 144
EM H + YN +I+ + G +D + DE+ RC +G NA
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIG-SLCE 399
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+N + +EA +SL ++Q T ++ L + G A+ L +M P
Sbjct: 400 HNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP--- 456
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
++ T++ ++ G F A+ N K V +N +I C+
Sbjct: 457 --DAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP---TVDNFNAMILGLCKIRRTD 511
Query: 265 EAETLFEELCSKSLSPDVPTH 285
A +FE + K P+ T+
Sbjct: 512 LAMEVFEMMVEKKRMPNETTY 532
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+ V+YN++I C R D A ++ ++A+ P VT+ + + A R+ E
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTIIDVYCRAKRVDEG 451
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ LLRE+ +G A++ YN LI GF E+ NL+ A +LF E+ + D + +
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F N + +EA++ ++ + + + V N+++ + K K +AW LF + + P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
Q T+N+M++ +A F K + D + YN +I + G
Sbjct: 572 VQ-----TYNVMISGFCGKSAISDANVLFHKMKDNGHEP----DNSTYNTLIRGCLKAGE 622
Query: 263 LSEAETLFEELCSKSLSPDVPT 284
+ ++ L E+ S S D T
Sbjct: 623 IDKSIELISEMRSNGFSGDAFT 644
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 111/275 (40%), Gaps = 14/275 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I PN+ +YN +I+ C GR A L R +I P +T+ L + G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKL 382
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA L EML++ D++ YN++I GF + D A +FD + D V T
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTI 438
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + R E M + + R T N L+ + A LF +M+ +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ N + NE K EAL F +D YN II C+
Sbjct: 499 CPDTITCNILLYGFCENE-----KLEEALELFEVI----QMSKIDLDTVAYNIIIHGMCK 549
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGG 294
+ EA LF L + PDV T+ +S G
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA--------------PFGPSA 63
T+ P++V++N +++ C E R+ AL L+ +++ T P
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
+T+ L G GR++EA L+ +M+ KG D + Y +++G ++G+ A L +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
++E + D V+ + ++ +G +A + ++++ T N +++ G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+ A L M++ P+ TFN +++ GK EA K + +
Sbjct: 347 WSDAQRLLRDMIEREINPDVL-----TFNALISASVKEGKLFEA----EKLCDEMLHRCI 397
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
D YN++I FC++ +A+ +F+ + SPDV T
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVT 434
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 31/290 (10%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R + AI+L+ + I NI S+N +I CD ++ +L + + F P
Sbjct: 118 RMNRPDVAISLYRKMEIR-RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG-FQPD 175
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L G RI EAL L M+ +GFLE A LFD
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVE--------------TGFLE------AVALFD 215
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ E L + T + GR EA ++ + + VT ++ + K G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A L +M + H P+ ++ +++ G +A F ++ K
Sbjct: 276 DTKSALNLLSKMEETHIKPDVV-----IYSAIIDRLCKDGHHSDAQYLF----SEMLEKG 326
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAA 292
A +V YN +I FC G S+A+ L ++ + ++PDV T A +SA+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N A LF + + P+ ++ N ++ C+ +++ ALEL+ +I + V Y
Sbjct: 484 NAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYN 541
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+ G ++ EA DL + G D YN +ISGF + AN LF ++K+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 14/262 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+ V+YN++I C R D A ++ + + P VT+ + + A R+ E
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEG 451
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ LLRE+ +G A++ YN LI GF E+ NL+ A +LF E+ + D + +
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F N + +EA++ ++ + + + V N+++ + K K +AW LF + + P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
Q T+N+M++ +A F K + D + YN +I + G
Sbjct: 572 VQ-----TYNVMISGFCGKSAISDANVLFHKMKDNGHEP----DNSTYNTLIRGCLKAGE 622
Query: 263 LSEAETLFEELCSKSLSPDVPT 284
+ ++ L E+ S S D T
Sbjct: 623 IDKSIELISEMRSNGFSGDAFT 644
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 111/275 (40%), Gaps = 14/275 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I PN+ +YN +I+ C GR A L R +I P +T+ L + G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGKL 382
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA L EML++ D++ YN++I GF + D A +FD + D V T
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTI 438
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + R E M + + R T N L+ + A LF +M+ +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ N + NE K EAL F +D YN II C+
Sbjct: 499 CPDTITCNILLYGFCENE-----KLEEALELFEVI----QMSKIDLDTVAYNIIIHGMCK 549
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGG 294
+ EA LF L + PDV T+ +S G
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA--------------PFGPSA 63
T+ P++V++N +++ C E R+ AL L+ +++ T P
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
+T+ L G GR++EA L+ +M+ KG D + Y +++G ++G+ A L +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
++E + D V+ + ++ +G +A + ++++ T N +++ G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+ A L M++ P+ TFN +++ GK EA K + +
Sbjct: 347 WSDAQRLLRDMIEREINPDVL-----TFNALISASVKEGKLFEA----EKLCDEMLHRCI 397
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
D YN++I FC++ +A+ +F+ + SPDV T
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVT 434
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 31/290 (10%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R + AI+L+ + I NI S+N +I CD ++ +L + + F P
Sbjct: 118 RMNRPDVAISLYRKMEIR-RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG-FQPD 175
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L G RI EAL L M+ +GFLE A LFD
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVE--------------TGFLE------AVALFD 215
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ E L + T + GR EA ++ + + VT ++ + K G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A L +M + H P+ ++ +++ G +A F ++ K
Sbjct: 276 DTKSALNLLSKMEETHIKPDVV-----IYSAIIDRLCKDGHHSDAQYLF----SEMLEKG 326
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAA 292
A +V YN +I FC G S+A+ L ++ + ++PDV T A +SA+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 11/294 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + EA+ LF ++ + PN+V++N VI+ GR D A +++ + P+
Sbjct: 272 KGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPT 329
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY L KG A RI +A +L+EM KG + +VYNNLI F+E G+L+KA E+ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + L T ++ + NG+ A K ++ F + + ++ +L H
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A +ML + P +++ GK +AL + + +K
Sbjct: 450 MFDSALRFVGEMLLRNMSPG-----GGLLTTLISGLCKHGKHSKALELW----FQFLNKG 500
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
F +D N ++ CE G L EA + +E+ + D ++ +S G +
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 129/332 (38%), Gaps = 78/332 (23%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHI--IATAP---------------------- 58
+ P++ + IN C G+V+ A++L+ + AP
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 59 ----------FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 108
P+ +TY L KG A RI +A +L+EM KG + +VYNNLI F
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 109 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-- 166
+E G+L+KA E+ D + + L T ++ + NG+ A K ++ F +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 167 ---TPVTC------------------------------NVLLEVLLKHGKKTQAWALFDQ 193
T V C L+ L KHGK ++A L+ Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
L+ V++ T N +++ GK EA + + + MD YN +
Sbjct: 496 FLNKGF-----VVDTRTSNALLHGLCEAGKLDEAF----RIQKEILGRGCVMDRVSYNTL 546
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
IS C L EA +E+ + L PD T+
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 16/275 (5%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
N+ P +I+ C G+ ALEL+ + F T L G AG++ E
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAGKLDE 523
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
A + +E+L +G D + YN LISG LD+A DE+ +R L D + +
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
FN + +EA+ + T +V+++ K + + FD+M+ + P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEAL---ATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
N+ +N ++ G+ AL + G NS + + G +IISR
Sbjct: 644 -----NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM-SIISR-- 695
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ EA+ LFEE+ + L P+V + A + G
Sbjct: 696 ----VEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 40/190 (21%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A+R E F ++ N+ PN V YN++I +C GR+ +ALEL R + P+
Sbjct: 622 KAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPN 679
Query: 63 AVTYRHLTKGFISAGRIVEA----------------------LD-------------LLR 87
+ TY L KG R+ EA +D LLR
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
EM +K + + Y +I G+ GN+ +A+ L +E++E+ +V D + TY E+ +
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI---TYKEFIYGYL 796
Query: 148 RDKEAMDSYK 157
+ ++++K
Sbjct: 797 KQGGVLEAFK 806
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R EA LF + + PN+ Y +I+ + G++ V +E + + P+ +T
Sbjct: 695 RVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKIT 752
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
Y + G+ G + EA LL EM KG DS+ Y I G+L+ G + +A + DE
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 11/294 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ + EA+ LF ++ + PN+V++N VI+ GR D A +++ + P+
Sbjct: 272 KGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPT 329
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY L KG A RI +A +L+EM KG + +VYNNLI F+E G+L+KA E+ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + L T ++ + NG+ A K ++ F + + ++ +L H
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A +ML + P +++ GK +AL + + +K
Sbjct: 450 MFDSALRFVGEMLLRNMSPG-----GGLLTTLISGLCKHGKHSKALELW----FQFLNKG 500
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
F +D N ++ CE G L EA + +E+ + D ++ +S G +
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 129/332 (38%), Gaps = 78/332 (23%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHI--IATAP---------------------- 58
+ P++ + IN C G+V+ A++L+ + AP
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 59 ----------FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 108
P+ +TY L KG A RI +A +L+EM KG + +VYNNLI F
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 109 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-- 166
+E G+L+KA E+ D + + L T ++ + NG+ A K ++ F +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 167 ---TPVTC------------------------------NVLLEVLLKHGKKTQAWALFDQ 193
T V C L+ L KHGK ++A L+ Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
L+ V++ T N +++ GK EA + + + MD YN +
Sbjct: 496 FLNKGF-----VVDTRTSNALLHGLCEAGKLDEAF----RIQKEILGRGCVMDRVSYNTL 546
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
IS C L EA +E+ + L PD T+
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 16/275 (5%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
N+ P +I+ C G+ ALEL+ + F T L G AG++ E
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCEAGKLDE 523
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
A + +E+L +G D + YN LISG LD+A DE+ +R L D + +
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
FN + +EA+ + T +V+++ K + + FD+M+ + P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEAL---ATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
N+ +N ++ G+ AL + G NS + + G +IISR
Sbjct: 644 -----NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM-SIISR-- 695
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ EA+ LFEE+ + L P+V + A + G
Sbjct: 696 ----VEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 40/190 (21%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A+R E F ++ N+ PN V YN++I +C GR+ +ALEL R + P+
Sbjct: 622 KAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMKHKGISPN 679
Query: 63 AVTYRHLTKGFISAGRIVEA----------------------LD-------------LLR 87
+ TY L KG R+ EA +D LLR
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
EM +K + + Y +I G+ GN+ +A+ L +E++E+ +V D + TY E+ +
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI---TYKEFIYGYL 796
Query: 148 RDKEAMDSYK 157
+ ++++K
Sbjct: 797 KQGGVLEAFK 806
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R EA LF + + PN+ Y +I+ + G++ V +E + + P+ +T
Sbjct: 695 RVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKIT 752
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
Y + G+ G + EA LL EM KG DS+ Y I G+L+ G + +A + DE
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 39/297 (13%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N V++N + C E + + + ++ F P VTY L K ++ G + AL++
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
+REM KG +++ N ++ + LD+A+ L + +R + D V T + FF
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPV--TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ ++A++ + + ++ K+TP T N L+ L HGK A FD++ ++ P+
Sbjct: 499 EEKVEKALEMWDEM--KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 204 QAVNSD------------------------------TFNIMVNECFNLGKFHEALATFRK 233
NS T NI++N G +AL F
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 234 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVS 290
+ +D YN +IS FC++ L EA L E+ K L PD T+ + +S
Sbjct: 617 LIEERE-----VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
Q I N ++ N +++ C E ++D A L F VTY L GF ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG-FIVDEVTYGTLIMGFFREEKV 502
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+AL++ EM +N+LI G G + A E FDEL E L+ D +
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + GR ++A + Y + FK TCN+LL L K G +A F+ +++
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-- 620
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
+ V++ T+N M++ K EA ++ K D YN+ IS E
Sbjct: 621 ----REVDTVTYNTMISAFCKDKKLKEAYDLL----SEMEEKGLEPDRFTYNSFISLLME 672
Query: 260 NGLLSEAETLFEELCSK 276
+G LSE + L ++ K
Sbjct: 673 DGKLSETDELLKKFSGK 689
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 16/275 (5%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+ ++N ++N +C EG+++ AL + +++ P VTY + K GR+ + +L
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
L +M G + + YNNL+ G+ +LG+L +A ++ + +K+ ++ D + N
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 146 NGRDKEAMDSYKSLMD--RQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
G +E ++ LMD + K+ P VT N L++ + G +A L +QM ++
Sbjct: 323 AGSMREGLE----LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV-- 376
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
N T NI + L K + A RK + F+ D+ Y+ +I + + G
Sbjct: 377 ---KANQVTHNISLKW---LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 262 LLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
LS A + E+ K + + T + A R
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +A+ + ++ + P+ V+YN ++ +GR+ EL + P+ VT
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG-LVPNRVT 277
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y +L G+ G + EA ++ M D YN LI+G G++ + EL D +K
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
L D V T ++ F G EA + + + K VT N+ L+ L K K+
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 186 QAWALFDQMLDNHT-PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+++D H P+ T++ ++ +G AL R+ G K
Sbjct: 398 AVTRKVKELVDMHGFSPDIV-----TYHTLIKAYLKVGDLSGALEMMREMG----QKGIK 448
Query: 245 MDVAGYNNIISRFCENGLLSEAETLF 270
M+ N I+ C+ L EA L
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLL 474
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 120/301 (39%), Gaps = 46/301 (15%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
Q+N++P++ +YN +IN C+ G + LEL + + P VTY L G
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELM-DAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 77 GRIVEALDLLREMLNKG----------------------------------HG--ADSLV 100
G +EA L+ +M N G HG D +
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 101 YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM 160
Y+ LI +L++G+L A E+ E+ ++ + + + T ++ + EA + S
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 161 DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 220
R F + VT L+ + K +A ++D+M P TFN ++ +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS-----TFNSLIGGLCH 533
Query: 221 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 280
GK A+ F + D + +N+II +C+ G + +A + E S P
Sbjct: 534 HGKTELAMEKFDELA----ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 281 D 281
D
Sbjct: 590 D 590
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
++ +VPN V+YNN++ +C G + A ++ + T P TY L G +AG +
Sbjct: 268 KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL-PDLCTYNILINGLCNAGSM 326
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
E L+L+ M + D + YN LI G ELG +A +L ++++ + + V +
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
++W + + K L+D F VT + L++ LK G + A + +M
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
+N+ T N +++ K EA A + + F +D Y +I F
Sbjct: 447 I-----KMNTITLNTILDALCKERKLDEAHNLLNSA----HKRGFIVDEVTYGTLIMGFF 497
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPT 284
+ +A +++E+ ++P V T
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVST 523
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 35/138 (25%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS--------------- 62
+S ++P+ ++N++I +C EGRV+ A E Y I + F P
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS-FKPDNYTCNILLNGLCKEG 605
Query: 63 -------------------AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 103
VTY + F ++ EA DLL EM KG D YN+
Sbjct: 606 MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 104 LISGFLELGNLDKANELF 121
IS +E G L + +EL
Sbjct: 666 FISLLMEDGKLSETDELL 683
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 20/268 (7%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI---SAGRIVE 81
P+ ++ ++ + EG+ VAL++++ +I P+ +T L G + S+ I
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYM 140
A ++ +M+ G + +N L++G+ G L+ A + + + V D V T +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 141 EWFFNNGRDKEAMDSYKSLMD-RQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ GR D + L+D ++ + P VT N L+ K G +A+ + + M
Sbjct: 248 KAMSKKGR---LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
+ P+ T+NI++N N G E L S DV YN +I
Sbjct: 305 NVLPDLC-----TYNILINGLCNAGSMREGLELMDAM----KSLKLQPDVVTYNTLIDGC 355
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTH 285
E GL EA L E++ + + + TH
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTH 383
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 12/278 (4%)
Query: 10 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
A LF F + P + +YN +I + +++A +++ + +T P TY L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFL 826
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL-FDELKERC 128
+ +G+I E +L +EM A+++ +N +ISG ++ GN+D A +L +D + +R
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
++ +GR EA ++ ++D + N+L+ K G+ A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
ALF +M+ P+ + T++++V+ +G+ E L F++ DV
Sbjct: 947 ALFKRMVKEGVRPDLK-----TYSVLVDCLCMVGRVDEGLHYFKEL----KESGLNPDVV 997
Query: 249 GYNNIISRFCENGLLSEAETLFEEL-CSKSLSPDVPTH 285
YN II+ ++ L EA LF E+ S+ ++PD+ T+
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N +++N VI+ G VD AL+LY +++ F P+A TY L G +GR+ EA L
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
ML+ G + +YN LI+GF + G D A LF + + + D + ++
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH-TPPNFQ 204
GR E + +K L + V N+++ L K + +A LF++M + P+
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 205 AVNSDTFNI----MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
NS N+ MV E GK + + ++AG + N V +N +I + +
Sbjct: 1034 TYNSLILNLGIAGMVEEA---GKIYNEI---QRAGLEPN-------VFTFNALIRGYSLS 1080
Query: 261 GLLSEAETLFEELCSKSLSPDVPTH 285
G A +++ + + SP+ T+
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I PNIV+ N + + GR A +++ + + P +VTY + K + G I EA
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ LL EM+ G D +V N+LI+ + +D+A ++F +KE L V T +
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
NG+ +EA++ ++ ++ + +T N L + L K+ + T A + +M+D P+
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRK 233
N+ F ++ N G+ EA+ F +
Sbjct: 643 VFTYNTIIFGLVKN-----GQVKEAMCFFHQ 668
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 12/284 (4%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ R R ++A+ LF + P +Y I+ + G ALE + + T
Sbjct: 408 LLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIA 465
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ V AGR EA + + + G DS+ YN ++ + ++G +D+A +L
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
E+ E D +V + + + R EA + + + + K T VT N LL L K
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
+GK +A LF+ M+ PP N+ TFN + F+ ++ + K K
Sbjct: 586 NGKIQEAIELFEGMVQKGCPP-----NTITFNTL----FDCLCKNDEVTLALKMLFKMMD 636
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
DV YN II +NG + EA F ++ K + PD T
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVT 679
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 128/351 (36%), Gaps = 79/351 (22%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY------------ 50
RA + NEA + P++V+Y +I+ C ++D A E++
Sbjct: 270 RAGKINEAYEILKRM-DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 51 -------------RHIIATAPFG---------PSAVTYRHLTKGFISAGRIVEALDLLRE 88
R + + F P VT+ L AG EA D L
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELF---DELKERCLVYDGVVNATY------ 139
M ++G + YN LI G L + LD A ELF + L + Y +V Y
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 140 ----MEWF----------------------FNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 173
+E F GRD+EA + L D VT N+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 174 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 233
+++ K G+ +A L +M++N P+ VNS ++N + + EA F +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS-----LINTLYKADRVDEAWKMFMR 563
Query: 234 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
V YN +++ +NG + EA LFE + K P+ T
Sbjct: 564 M----KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 51/297 (17%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS-------- 75
V N SYN +I+ A+E+YR +I F PS TY L G
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 76 ---------------------------AGRIVEALDLLREMLNKGHGADSLVYNNLISGF 108
AG+I EA ++L+ M ++G G D + Y LI
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 109 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 168
LD A E+F+++K D V T ++ F +N RD +++ + S M++ +
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN-RDLDSVKQFWSEMEKDGHVPD 362
Query: 169 -VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 227
VT +L++ L K G +A+ D M D PN T+N ++ + + +A
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH-----TYNTLICGLLRVHRLDDA 417
Query: 228 LATFRKAGTKSNSKAFAMDVAGYNNI--ISRFCENGLLSEAETLFEELCSKSLSPDV 282
L F N ++ + Y I I + ++G A FE++ +K ++P++
Sbjct: 418 LELF------GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 13/272 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+ ++ I G+++ A E+ + + GP VTY L +A ++ A +
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRM-DDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ +M H D + Y L+ F + +LD + + E+++ V D V ++
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA D+ + D+ T N L+ LL+ + A LF M P
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP--- 431
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ T+ + ++ G AL TF K T K A ++ N + + G
Sbjct: 432 --TAYTYIVFIDYYGKSGDSVSALETFEKMKT----KGIAPNIVACNASLYSLAKAGRDR 485
Query: 265 EAETLFEELCSKSLSPDVPTH---FACVSAAG 293
EA+ +F L L PD T+ C S G
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 21/284 (7%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
+EAI L ++ P+++ N++INT RVD A +++ + P+ VTY
Sbjct: 520 DEAIKLLSEMM-ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTYN 577
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L G G+I EA++L M+ KG +++ +N L + + A ++ ++ +
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAM---DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
V D T + NG+ KEAM K L+ F VT LL ++K
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF----VTLCTLLPGVVKASLI 693
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF--NLGKFHEALATFRKAGTKSNSKA 242
A+ + L N D ++ E N F E L G + +
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA---NGICRDGDS 750
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSK-SLSPDVPTH 285
+ + Y+ C++ +S A TLFE+ + P +PT+
Sbjct: 751 ILVPIIRYS------CKHNNVSGARTLFEKFTKDLGVQPKLPTY 788
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A N A+++ + ++ P++V+YN ++ + CD G++ A+E+ ++ + P
Sbjct: 184 KAGEINNALSVLD----RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PD 238
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY L + + A+ LL EM ++G D + YN L++G + G LD+A + +
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ + + + + + GR +A ++ + F + VT N+L+ L + G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+A + ++M + PN S ++N +++ K A+ + S+
Sbjct: 359 LLGRAIDILEKMPQHGCQPN-----SLSYNPLLHGFCKEKKMDRAIEYLERM----VSRG 409
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
D+ YN +++ C++G + +A + +L SK SP + T+
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
S VP++++YN +I+ +C G ++ AL ++ P VTY + + +G++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
+A+++L ML + D + Y LI + A +L DE+++R D V +
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
GR EA+ + + +T N++L + G+ A L ML
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 201 PNFQAVNSDTFNIMVN-ECFN--LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
P+ TFNI++N C LG+ + L + G + NS + YN ++ F
Sbjct: 342 PSVV-----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS-------YNPLLHGF 389
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
C+ + A E + S+ PD+ T+ ++A
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EAI + S PN++++N ++ + C GR A +L ++ F PS VT
Sbjct: 289 RLDEAIKFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSPSVVT 346
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ L G + A+D+L +M G +SL YN L+ GF + +D+A E + +
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
R D V T + +G+ ++A++ L + +T N +++ L K GK
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA---TFRKAGTKSNSKA 242
+A L D+M P ++ T++ +V GK EA+ F + G + N+
Sbjct: 467 KAIKLLDEMRAKDLKP-----DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 243 FAMDVAGYNN-------------IISRFCE---------------NGLLSEAETLFEELC 274
F + G +I+R C+ G+ EA L ELC
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 275 SKSL 278
+K L
Sbjct: 582 NKGL 585
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 19/273 (6%)
Query: 15 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 74
H+ S+ V NN + G ++ + +++ P + L +GF
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFC 148
Query: 75 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 134
G+ +A +L + G D + YN +ISG+ + G ++ A + D + + D V
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVV 205
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
T + ++G+ K+AM+ ++ R +T +L+E + A L D+M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 195 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYN 251
D P+ T+N++VN G+ EA L +G + N V +N
Sbjct: 266 RDRGCTPDVV-----TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN-------VITHN 313
Query: 252 NIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
I+ C G +AE L ++ K SP V T
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ +A + +AI L + ++ P+ ++Y++++ EG+VD A++ + H
Sbjct: 459 LAKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFF-HEFERMGIR 516
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+AVT+ + G + + A+D L M+N+G + Y LI G G +A EL
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 121 FDEL 124
+EL
Sbjct: 577 LNEL 580
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 8 NEAIALFHFFFTQSN----IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
N+ L H F S I PNI + N ++ C + ++ A ++ I + P+
Sbjct: 168 NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMG-LVPNL 226
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + G+++ G + A +L EML++G D+ Y L+ G+ +LG +A + D+
Sbjct: 227 VTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDD 286
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+++ + + V + + EA + + +++R F C +++ L + K
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A L+ +ML N+ P+ A+ S + + E G+ EA F + K
Sbjct: 347 VDEACGLWRKMLKNNCMPD-NALLSTLIHWLCKE----GRVTEARKLFDEF-----EKGS 396
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ YN +I+ CE G L+EA L++++ + P+ T+
Sbjct: 397 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 13/305 (4%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
A RY ++ +F + ++ S N ++N R D+ ++++ + P+
Sbjct: 133 AGRYESSMRIF-LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNI 191
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
T L K I A +L E+ + G + + Y ++ G++ G+++ A + +E
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ +R D M+ + GR EA + + + VT V++ L K K
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A +FD+ML+ P +S +++ K EA +RK K+N
Sbjct: 312 SGEARNMFDEMLERSFMP-----DSSLCCKVIDALCEDHKVDEACGLWRKM-LKNNCMP- 364
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTAT 303
D A + +I C+ G ++EA LF+E S+ P + T+ + AG T
Sbjct: 365 --DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLI--AGMCEKGELTEA 419
Query: 304 SKYWN 308
+ W+
Sbjct: 420 GRLWD 424
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 3/195 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+ EA +F +S +P+ VI+ C++ +VD A L+R ++ P
Sbjct: 308 KEKKSGEARNMFDEMLERS-FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM-PD 365
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
L GR+ EA L E KG L YN LI+G E G L +A L+D
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ ER + +E NG KE + + +++ T +L E L K G
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 183 KKTQAWALFDQMLDN 197
K+ A + + N
Sbjct: 485 KEEDAMKIVSMAVMN 499
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 8/229 (3%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R++EA + ++ I PN V+Y +I C E + A ++ ++ + F P +
Sbjct: 276 RFSEAATVMDDM-EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS-FMPDSSL 333
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ ++ EA L R+ML D+ + + LI + G + +A +LFDE
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF- 392
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E+ + + T + G EA + + +R+ K T NVL+E L K+G
Sbjct: 393 EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 234
+ + ++ML+ P N TF I+ LGK +A+ A
Sbjct: 453 EGVRVLEEMLEIGCFP-----NKTTFLILFEGLQKLGKEEDAMKIVSMA 496
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 10/258 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ +YN +IN C R+D A + + + F P VTY + S G++ AL
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L ++L+ + Y LI + G +D+A +L DE+ R L D T +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G A + ++L + + ++ N+LL LL GK + L +M PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T++I++ GK EA+ + K D Y+ +I+ FC G L
Sbjct: 335 -----TYSILITTLCRDGKIEEAMNLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 265 EAETLFEELCSKSLSPDV 282
A E + S PD+
Sbjct: 386 VAIEFLETMISDGCLPDI 403
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ V+YN +I + C G++D+AL++ +++ P+ +TY L + + G + EAL
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN-CQPTVITYTILIEATMLEGGVDEALK 249
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L+ EML++G D YN +I G + G +D+A E+ L+ + D + +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 145 NNGRDKEAMDSYKSLMDRQF--KMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
N G+ +E + LM + F K P VT ++L+ L + GK +A L M +
Sbjct: 310 NQGKWEEG----EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P ++ +++ ++ G+ A+ S D+ YN +++ C+N
Sbjct: 366 P-----DAYSYDPLIAAFCREGRLDVAIEFLETM----ISDGCLPDIVNYNTVLATLCKN 416
Query: 261 GLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G +A +F +L SP+ ++ SA
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 125/320 (39%), Gaps = 44/320 (13%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-------------- 53
+EA+ L ++ + P++ +YN +I C EG VD A E+ R++
Sbjct: 245 DEALKLMDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 54 ----------------IATAPFG----PSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 93
+ T F P+ VTY L G+I EA++LL+ M KG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 94 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 153
D+ Y+ LI+ F G LD A E + + + D V T + NG+ +A+
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 154 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 213
+ + L + + N + L G K +A + +M+ N P + T+N
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-----DEITYNS 478
Query: 214 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
M++ G EA S F V YN ++ FC+ + +A + E +
Sbjct: 479 MISCLCREGMVDEAFELL----VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 274 CSKSLSPDVPTHFACVSAAG 293
P+ T+ + G
Sbjct: 535 VGNGCRPNETTYTVLIEGIG 554
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 36/289 (12%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
+ + C G +L L ++ + P + L KGF + I +A+ ++ E+L K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
D YN LI+GF ++ +D A + D ++ + D V + + G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS---- 208
+ L+ + T +T +L+E + G +A L D+ML P+ N+
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 209 --------------------------DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
++NI++ N GK+ E K TK S+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG----EKLMTKMFSEK 328
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+V Y+ +I+ C +G + EA L + + K L+PD ++ ++A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R + AI + +P+IV+YN V+ T C G+ D ALE++ + P+
Sbjct: 380 REGRLDVAIEFLETMISDG-CLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPN 437
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+ +Y + S+G + AL ++ EM++ G D + YN++IS G +D+A EL
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 123 ELKERCLVYDGVVNATY---MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
+++ C + VV TY + F R ++A++ +S++ + T VL+E +
Sbjct: 498 DMRS-CEFHPSVV--TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 180 KHGKKTQAWALFDQML 195
G + +A L + ++
Sbjct: 555 FAGYRAEAMELANDLV 570
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 20/284 (7%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
++ ++L + + P++ + N +I++ C GR+ A+ L R+ + + VTY
Sbjct: 110 HDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI----DTVTYN 165
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
+ G G EA L EM+ G D++ YN LI GF ++GN +A L DE+ E
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
L+ ++ ++Y +N +EA Y+ ++ F VT + ++ L K GK +
Sbjct: 226 NLITHTILLSSY----YNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEG 278
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
L +M + PN T+ +V+ F + ALA + ++ + +D+
Sbjct: 279 GLLLREMEEMSVYPNHV-----TYTTLVDSLFKANIYRHALALY----SQMVVRGIPVDL 329
Query: 248 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
Y ++ + G L EAE F+ L + P+V T+ A V
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGR-------VDVALEL--------------------- 49
+ I+P+ VSYN +I+ C G VD EL
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA 246
Query: 50 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 109
YR ++ + F P VT+ + G+++E LLREM + + Y L+
Sbjct: 247 YRDMVMSG-FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 110 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
+ A L+ ++ R + D VV M+ F G +EA ++K L++ V
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 170 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
T L++ L K G + A + QML+ PN T++ M+N G EA++
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV-----TYSSMINGYVKKGMLEEAVS 420
Query: 230 TFRK 233
RK
Sbjct: 421 LLRK 424
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 14/271 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+++S N V+ C+ G+++ A+ + ++ P+ TYR R
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM-EIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+L+ G VYN LI+ +LG KA + +++ R + D V + M
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG--KKTQAWALFDQMLDNHTP 200
+F ++A+ +Y +M+ T N ++ L G K+ W L + P
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW-LSEMKSRGMRP 781
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
+F T+N +++ +G ++ + + + + YN +IS F
Sbjct: 782 DDF------TYNALISGQAKIGNMKGSMTIY----CEMIADGLVPKTSTYNVLISEFANV 831
Query: 261 GLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G + +A L +E+ + +SP+ T+ +S
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+++++IN C G+V L R + + + P+ VTY L A AL
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY-PNHVTYTTLVDSLFKANIYRHALA 315
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +M+ +G D +VY L+ G + G+L +A + F L E V + V ++
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G A ++++ VT + ++ +K G +A +L +M D + P
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP--- 432
Query: 205 AVNSDTFNIMVNECFNLGKFHEAL---ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
N T+ +++ F GK A+ R G + N+ + +D +++ G
Sbjct: 433 --NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN--YILDA-----LVNHLKRIG 483
Query: 262 LLSEAETLFEELCSKSLSPD 281
+ E + L +++ SK ++ D
Sbjct: 484 RIKEVKGLVKDMVSKGVTLD 503
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 133/298 (44%), Gaps = 40/298 (13%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+++A Y A+AL+ + I ++V Y +++ G + A + ++ ++
Sbjct: 304 LFKANIYRHALALYSQMVVR-GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV- 361
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ VTY L G AG + A ++ +ML K + + Y+++I+G+++ G L++A L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV-TCNVLLEVLL 179
+++++ +V +G T ++ F G+++ A++ + ++ ++ V N +L+ L+
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE-----LSKEMRLIGVEENNYILDALV 476
Query: 180 KH----GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 235
H G+ + L M+ + V D N + + F K G
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVS-------KGVTLDQIN-----------YTSLIDVFFKGG 518
Query: 236 TKS---------NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+ + DV YN +IS + G + A+ ++ + K + PD+ T
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIAT 575
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 124/310 (40%), Gaps = 45/310 (14%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY-- 66
EA++L Q N+VPN +Y VI+ G+ ++A+EL + + G Y
Sbjct: 417 EAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM---RLIGVEENNYIL 472
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L GRI E L+++M++KG D + Y +LI F + G+ + A +E++E
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMD-SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
R + +D V + G K D +YK + ++ + T N+++ K G
Sbjct: 533 RGMPWDVVSYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---------------LAT 230
L+D+M P+ + NI+V GK EA L T
Sbjct: 591 GILKLWDKMKSCGIKPSLMSC-----NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 231 FR----------------KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 274
+R K S + YN +I+ C+ G+ +A + ++
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 275 SKSLSPDVPT 284
++ PD T
Sbjct: 706 ARGFIPDTVT 715
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 11/276 (3%)
Query: 10 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
++ +F Q ++ PN++SYN++IN C+ G++ A+ + R + +A P+ +TY L
Sbjct: 315 SMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISM-RDKMVSAGVQPNLITYNAL 372
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 129
GF + EALD+ + +G + +YN LI + +LG +D L +E++ +
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 130 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 189
V D + NG + A + L + VT ++L+E + G+ +A
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAM 491
Query: 190 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 249
L +M P T+NI++ G +A R K + M+VA
Sbjct: 492 LLKEMSKMGLKPRHL-----TYNIVMKGYCKEGNL-KAATNMRTQMEK--ERRLRMNVAS 543
Query: 250 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
YN ++ + + G L +A L E+ K L P+ T+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 24/275 (8%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ I PN+ ++N VIN C G+++ A ++ + P+ V+Y L G+ G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG-CSPNVVSYNTLIDGYCKLG 272
Query: 78 ---RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-----KERCL 129
++ +A +L+EM+ + +N LI GF + NL + ++F E+ K +
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 130 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 189
Y+ ++N N G+ EA+ ++ + +T N L+ K+ +A
Sbjct: 333 SYNSLING-----LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 190 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 249
+F + P + +N++++ LGK + A + + DV
Sbjct: 388 MFGSVKGQGAVP-----TTRMYNMLIDAYCKLGKIDDGFALKEEM----EREGIVPDVGT 438
Query: 250 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
YN +I+ C NG + A+ LF++L SK L PD+ T
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ NN R + +++K +K++ ++C L+ LLK + ++ +M+ PN
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE--- 259
TFN+++N GK ++A R + +V YN +I +C+
Sbjct: 223 VF-----TFNVVINALCKTGKMNKA----RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 260 NGLLSEAETLFEELCSKSLSPDVPT 284
NG + +A+ + +E+ +SP++ T
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTT 298
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
++ + P+ V+Y +++ +C G+VD A L + ++ P+A T L
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKM 444
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF--------------- 121
GRI EA +LLR+M KG+G D++ N ++ G G LDKA E+
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 122 --------DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 173
D L E + D + +T + GR EA + + +M + + V N+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 174 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV-NECFNLGKFHEALATFR 232
+ K GK + A+ + M + + NS + + N+ F + H + +
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI---HGLMDEMK 621
Query: 233 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
+ G N + YN I CE + +A L +E+ K+++P+V
Sbjct: 622 EKGISPN-------ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 15/304 (4%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
+R E ++ + I P ++N +I CD VD A EL+ + P+
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKPNEF 183
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
T+ L +G+ AG + L+LL M + G + ++YN ++S F G D + ++ +++
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP----VTCNVLLEVLLK 180
+E LV D V + + G+ +A + + ++ P +T N++L+ K
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
G A LF+ + +N + Q ++NI + GKF EA ++
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQ-----SYNIWLQGLVRHGKFIEAETVLKQM----TD 354
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPT 300
K + YN ++ C+ G+LS+A+T+ + + PD T + C+ S G
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT-YGCLLHGYCSVGKVD 413
Query: 301 TATS 304
A S
Sbjct: 414 AAKS 417
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 131/319 (41%), Gaps = 62/319 (19%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG---PSAVTYRHLTKGF--- 73
+ +VP+IV++N+ I+ C EG+V A ++ + G P+++TY + KGF
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 74 --------------------------------ISAGRIVEALDLLREMLNKGHGADSLVY 101
+ G+ +EA +L++M +KG G Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 102 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 161
N L+ G +LG L A + +K + D V + + + G+ A + +M
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 162 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 221
TCN+LL L K G+ ++A L +M + +++ T NI+V+
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY-----GLDTVTCNIIVDGLCGS 479
Query: 222 GKFHEALATFR--------KAGTKSNSKAFAM-----------DVAGYNNIISRFCENGL 262
G+ +A+ + G NS + D+ Y+ +++ C+ G
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 263 LSEAETLFEELCSKSLSPD 281
+EA+ LF E+ + L PD
Sbjct: 540 FAEAKNLFAEMMGEKLQPD 558
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 8/262 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ YN ++ + E RV+ LY+ ++ P T+ L + + + A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG-IAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM KG + + L+ G+ + G DK EL + ++ ++ + V+ T + F
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNF 203
GR+ ++ + + + VT N + L K GK A +F M LD +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL--GL 286
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
NS T+N+M+ +G +A F + N ++ YN + +G
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFE--SIRENDDLASLQ--SYNIWLQGLVRHGKF 342
Query: 264 SEAETLFEELCSKSLSPDVPTH 285
EAET+ +++ K + P + ++
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSY 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 114/297 (38%), Gaps = 12/297 (4%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N I L ++N +P++++Y+ ++N C GR A L+ ++ P +V Y
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYN 563
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
F G+I A +L++M KG YN+LI G + + + L DE+KE+
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
+ + T +++ + ++A + +M + + L+E K A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
+F+ T + +++M NE G+ +A + F +
Sbjct: 684 QEVFE------TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV----LDRGFELGT 733
Query: 248 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATS 304
Y +++ C+ L A + ++ + D P V G G A S
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFD-PAALMPVIDGLGKMGNKKEANS 789
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ YN+V++T E R+ + +YR + F P+ TY L K ++ A
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG-FEPNVFTYNVLLKALCKNNKVDGAKK 202
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM NKG D++ Y +IS E+G + + EL + + VY+ ++N E +
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDY 262
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
K A + + ++++ ++ + L+ VL G+ A++ QML PN
Sbjct: 263 -----KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM--DVAGYNNIISRFCENGL 262
++S +V CF G +AL + + + F + +V YN ++ FC +G
Sbjct: 318 TLSS-----LVKGCFLRGTTFDALDLWNQM-----IRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 263 LSEAETLFEELCSKSLSPDVPTH 285
+ +A ++F + SP++ T+
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTY 390
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 18/262 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ VSY VI++ C+ G V EL F P Y L G A +
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAER------FEPVVSVYNALINGLCKEHDYKGAFE 267
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L+REM+ KG + + Y+ LI+ G ++ A ++ +R + ++ ++ F
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G +A+D + ++ R F + P V N L++ HG +A ++F M + PN
Sbjct: 328 LRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ T+ ++N G A+ + K T +V Y N++ C +
Sbjct: 387 IR-----TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP----NVVVYTNMVEALCRHSK 437
Query: 263 LSEAETLFEELCSKSLSPDVPT 284
EAE+L E + ++ +P VPT
Sbjct: 438 FKEAESLIEIMSKENCAPSVPT 459
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 123/301 (40%), Gaps = 47/301 (15%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDV-------------------------------- 45
+ I PN++SY+ +IN C+ G++++
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 46 ---ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 102
AL+L+ +I P+ V Y L +GF S G IV+A+ + M G + Y
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 103 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 162
+LI+GF + G+LD A +++++ + VV +E + + KEA +S +M +
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA-ESLIEIMSK 450
Query: 163 QFKMTPV-TCNVLLEVLLKHGKKTQAWALFDQMLDNH-TPPNFQAVNSDTFNIMVNECFN 220
+ V T N ++ L G+ A +F QM H PPN T+N +++
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV-----TYNELLDGLAK 505
Query: 221 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 280
+ EA R+ + + YN ++ C GL A L ++ SP
Sbjct: 506 ANRIEEAYGLTREIFM----RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 281 D 281
D
Sbjct: 562 D 562
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 17/282 (6%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+A+ L++ + PN+V+YN ++ C G + A+ ++ H+ P+ TY
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG-CSPNIRTYGS 392
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KER 127
L GF G + A+ + +ML G + +VY N++ +A L + + KE
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKT 185
C NA +++ + GR A ++ M++Q + P VT N LL+ L K +
Sbjct: 453 CAPSVPTFNA-FIKGLCDAGRLDWAEKVFRQ-MEQQHRCPPNIVTYNELLDGLAKANRIE 510
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A+ L ++ +S T+N +++ N G AL K S
Sbjct: 511 EAYGLTREIFMRGV-----EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP---- 561
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEEL-CS-KSLSPDVPTH 285
D N II +C+ G A + + + C + PDV ++
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 9/233 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ R ++ EA +L ++ N P++ ++N I CD GR+D A +++R +
Sbjct: 432 LCRHSKFKEAESLIEIM-SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ VTY L G A RI EA L RE+ +G S YN L+ G G A +L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEA--MDSYKSLMDRQFKMTPVTCNVLLEVL 178
++ D + + + G+ + A M S R+++ ++ ++ L
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 231
+ + L ++M+ P+ T+++++N CF L A F
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIA-----TWSVLIN-CFILDDIVRAHDQF 657
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 112/259 (43%), Gaps = 24/259 (9%)
Query: 32 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
+V+ E V +AL ++ I + F + +T+ + + G++ LL++M
Sbjct: 45 DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEWFFNN 146
+G ++ ++IS + ++G ++A E+F +KE +Y+ V++
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT-----LLGE 159
Query: 147 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
R + Y+ + F+ T NVLL+ L K+ K A L +M + P
Sbjct: 160 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP----- 214
Query: 207 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
++ ++ +++ +G E + ++ F V+ YN +I+ C+ A
Sbjct: 215 DAVSYTTVISSMCEVGLVKEG---------RELAERFEPVVSVYNALINGLCKEHDYKGA 265
Query: 267 ETLFEELCSKSLSPDVPTH 285
L E+ K +SP+V ++
Sbjct: 266 FELMREMVEKGISPNVISY 284
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I PN+V+++ +I+ +G++ A +LY +I + P+ TY L GF R+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS-IDPNIFTYSSLINGFCMLDRL 374
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA +L M+ K + + YN LI+GF + +DK ELF E+ +R LV + V T
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ FF A +K ++ +T N+LL+ L K+GK +A +F+ + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKF 224
P+ T+NIM+ GK+
Sbjct: 495 EPDIY-----TYNIMIEGMCKAGKW 514
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 38/311 (12%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ +EA+AL Q P++V+Y V+N C G D+AL L + A A + V
Sbjct: 198 KASEAVALIDRM-VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA-AKIEANVVI 255
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + +AL+L EM NKG + + Y++LIS G A+ L ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
ER + + V + ++ F G+ +A Y+ ++ R T + L+ +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKA 242
+A + + M+ PN T+N ++N + + + FR + G N+
Sbjct: 376 EAKQMLELMIRKDCLPNVV-----TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 243 FAMDVAG----------------------------YNNIISRFCENGLLSEAETLFEELC 274
+ + G YN ++ C+NG L++A +FE L
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 275 SKSLSPDVPTH 285
++ PD+ T+
Sbjct: 491 RSTMEPDIYTY 501
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 126/296 (42%), Gaps = 45/296 (15%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+ N+++N C R+ A+ L ++ + P VT+ L G + EA+
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-----RCLVYDGVVNA-- 137
L+ M+ +G D + Y +++G + G+ D A L ++++ ++Y V+++
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 138 ------------TYME----------------WFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
T ME N GR +A +++R+ V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 170 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
T + L++ +K GK +A L+++M+ PN T++ ++N L + EA
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF-----TYSSLINGFCMLDRLGEA-- 377
Query: 230 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
++ K +V YN +I+ FC+ + + LF E+ + L + T+
Sbjct: 378 --KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 11/284 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
++AI LF QS P+I+ ++ +++ + D+ + + + + TY
Sbjct: 60 DDAIGLFGVM-AQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYN 117
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L F R+ AL LL +M+ G+ D + N+L++GF + A L D++ E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
D V T + F + + EA+ ++ R + VT ++ L K G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
L ++M +A N ++ +++ +AL F T+ +K +V
Sbjct: 238 LNLLNKM----EAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLF----TEMENKGVRPNV 288
Query: 248 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
Y+++IS C G S+A L ++ + ++P++ T A + A
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 10/261 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ ++N +IN +C + D+AL+L+R + P+ V++ L +GF+S+G+I E +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKG-CEPNVVSFNTLIRGFLSSGKIEEGVK 284
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ EM+ G L+ G G +D A L +L + ++ + +E
Sbjct: 285 MAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+ AM+ + L + + C L+E L K G+ +A ++M++ P
Sbjct: 345 GENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP--- 401
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+S TFN+++ + + +A + ++SK + D Y+ ++S F + G
Sbjct: 402 --DSVTFNLLLRDLCSSDHSTDA----NRLRLLASSKGYEPDETTYHVLVSGFTKEGRRK 455
Query: 265 EAETLFEELCSKSLSPDVPTH 285
E E L E+ K + PD+ T+
Sbjct: 456 EGEVLVNEMLDKDMLPDIFTY 476
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
+ + I+ +C ++D AL + + P+ Y + G++ +G + +AL + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
+ D +N LI+G+ D A +LF E+KE+ + V T + F ++G+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+E + +++ + + TC +L++ L + G+ A L +L+ P+
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 10/278 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N A+ALF+ + I PN++ YN +I ++G + A +L + + P T+
Sbjct: 373 NRALALFNEALGKG-IKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFN 430
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L G G + +A L++ M++KG+ D +N LI G+ ++ A E+ D + +
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
+ D + + + ++ M++YK+++++ T N+LLE L ++ K +A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
L ++M + P ++ TF +++ G A FRK + +
Sbjct: 551 LGLLEEMKNKSVNP-----DAVTFGTLIDGFCKNGDLDGAYTLFRKM---EEAYKVSSST 602
Query: 248 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
YN II F E ++ AE LF+E+ + L PD T+
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 45/265 (16%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++PN+ +YN I C G +D A+ + +I P P +TY +L G +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKF 302
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA L +M+N+G DS YN LI+G+ + G + +L ER +V D V N
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV--------QLAER-IVGDAVFNGFV 353
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ F +Y+SL+D L G+ +A ALF++ L
Sbjct: 354 PDQF-----------TYRSLIDG---------------LCHEGETNRALALFNEALGKGI 387
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
PN +N ++ N G EA + + + K +V +N +++ C+
Sbjct: 388 KPNVI-----LYNTLIKGLSNQGMILEA----AQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 260 NGLLSEAETLFEELCSKSLSPDVPT 284
G +S+A+ L + + SK PD+ T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFT 463
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 117/318 (36%), Gaps = 60/318 (18%)
Query: 3 RAKRYNEAIALFH---FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF 59
R + EA+ +F F+ + P + SYN +++ D G D A ++Y +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCE----PTVFSYNAIMSVLVDSGYFDQAHKVYMR-MRDRGI 142
Query: 60 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE 119
P ++ K F R AL LL M ++G + + Y ++ GF E + E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
LF ++ + S SL F N LL VL
Sbjct: 203 LFGKM----------------------------LASGVSLCLSTF-------NKLLRVLC 227
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGT 236
K G + L D+++ PN T+N+ + G+ A + + G
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLF-----TYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
K DV YNN+I C+N EAE ++ ++ L PD T+ + AG +
Sbjct: 283 KP-------DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI--AGYCK 333
Query: 297 GPPTTATSKYWNASTFMG 314
G + + F G
Sbjct: 334 GGMVQLAERIVGDAVFNG 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ PN+ ++N ++ + C ++D AL L + P AVT+ L GF G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNG 580
Query: 78 RIVEALDLLREMLNKGHGADSL-VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
+ A L R+M + S YN +I F E N+ A +LF E+ +RCL DG
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
++ F G +M+ F + T ++ L + +A + +M+
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 197 NHTPPNFQAVNS 208
P +AVN+
Sbjct: 701 KGLVP--EAVNT 710
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 119/311 (38%), Gaps = 44/311 (14%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P++ S+ + + C R AL L ++ ++ + V Y + GF E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNM-SSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+L +ML G +N L+ + G++ + +L D++ +R ++ + +++
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G A+ L+++ K +T N L+ L K+ K +A +M++ P+
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 203 F--------------------QAVNSDTFNIMVNECFNL----------GKFHEALATFR 232
+ V FN V + F G+ + ALA F
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 233 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT-------- 284
+A K +V YN +I G++ EA L E+ K L P+V T
Sbjct: 381 EA----LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 285 -HFACVSAAGG 294
CVS A G
Sbjct: 437 CKMGCVSDADG 447
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R ++ +EA+ L +S + P+ V++ +I+ C G +D A L+R + S
Sbjct: 543 RYRKLDEALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY + F + A L +EM+++ G D Y ++ GF + GN++ +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 123 ELKE 126
E+ E
Sbjct: 662 EMME 665
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 11/283 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++K+ + A+ L + + I P++V+YN++I+ C GR A + + + P
Sbjct: 198 KSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY-PD 255
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ L + GR+ EA + EM+ + D + Y+ LI G LD+A E+F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + D V + + + + + + M + + R VT +L++ + G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K A +F +M+ PN T+N++++ + GK +AL A + N
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNII-----TYNVLLHGLCDNGKIEKALVIL--ADMQKN--G 426
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
D+ YN II C+ G +++A ++ L + L PD+ T+
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 10/264 (3%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
T+ I P++ ++N +I+ EGRV A E Y +I + P VTY L G
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS-LDPDIVTYSLLIYGLCMYS 305
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
R+ EA ++ M++KG D + Y+ LI+G+ + ++ +LF E+ +R +V + V
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++ + G+ A + ++ ++ +T NVLL L +GK +A + M N
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
+ T+NI++ G+ +A + N + D+ Y ++
Sbjct: 426 GMDADIV-----TYNIIIRGMCKAGEVADAWDIY----CSLNCQGLMPDIWTYTTMMLGL 476
Query: 258 CENGLLSEAETLFEELCSKSLSPD 281
+ GL EA+ LF ++ + P+
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 128/283 (45%), Gaps = 11/283 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K+Y+ I L+ I N+ + N ++N C ++ +AL +I PS
Sbjct: 93 KMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG-HEPS 150
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L GF R+ +AL + +M+ G+ + ++YN +I G + +D A +L +
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+++ + D V + + ++GR +A + R+ T N L++ +K G
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+ ++A +++M+ P+ T+++++ + EA F G +
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIV-----TYSLLIYGLCMYSRLDEAEEMF---GFMVSKGC 322
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
F DV Y+ +I+ +C++ + LF E+ + + + T+
Sbjct: 323 FP-DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN ++Y+ +++ R A+EL+ +I+ P VT+ + GF AG + A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L M G + Y+ L++GF ++G + +A + FDE+K+ L D V T M F
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
NG EAM + + + +T NV+L L G+ +A QMLD
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL----QMLDQWGSEGVH 405
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+N ++ I++N G+ +A+ K + + + A +N ++ R CE+G
Sbjct: 406 -LNKGSYRIILNALCCNGELEKAV----KFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 26/252 (10%)
Query: 44 DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML-----NKGHGADS 98
D +E++ I A PS I +G + +L R++L N G ++
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEV----NLSRKLLLYAKHNLGLQPNT 196
Query: 99 LVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYMEWFFNNGRDKEAMDSYK 157
++N L+ + G+++ A + +E+K + Y + + +T M+ F + R KEA++ ++
Sbjct: 197 CIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFE 256
Query: 158 SLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 216
++ ++ PVT NV++ + G+ +A + D M N PN ++ ++N
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY-----NYSALMN 311
Query: 217 ECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+GK EA TF +K G K +D GY +++ FC NG EA L E+
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLK-------LDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
Query: 274 CSKSLSPDVPTH 285
+ D T+
Sbjct: 365 KASRCRADTLTY 376
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 1/207 (0%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++ R EA+ LF ++ I P+ V++N +IN C G V+ A ++ +
Sbjct: 242 LFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL-DFMKKNGCN 300
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ Y L GF G+I EA E+ G D++ Y L++ F G D+A +L
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
E+K D + + + GR +EA+ + + ++L L
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVN 207
+G+ +A M + P+ N
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWN 447
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I PN+V+Y+++I C GR+ A E H + + P+ +T+ L + G++ +
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADA-ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ + M+ + Y++LI G +D+A ++ D + + + V +T
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 197
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
FF + R + + + R V+CN L++ + GK A +F M N PN
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 257
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ ++NI++ F G+ +AL+ F N +D+ Y +I C+ +
Sbjct: 258 IR-----SYNIVLAGLFANGEVEKALSRFEHMQKTRND----LDIITYTIMIHGMCKACM 308
Query: 263 LSEAETLFEELCSKSLSPD 281
+ EA LF +L K + PD
Sbjct: 309 VKEAYDLFYKLKFKRVEPD 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
Q +I PN+ +Y+++I C RVD A+++ +I+ P+ VTY L GF +
Sbjct: 143 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG-CTPNVVTYSTLANGFFKS 201
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
R+ + + LL +M +G A+++ N LI G+ + G +D A +F + L+ +
Sbjct: 202 SRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+ F NG ++A+ ++ + + + +T +++ + K +A+ LF ++
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHE--ALATFRKAGTKSNSKAFA 244
P+F+A + IM+ E G E AL F + + N A A
Sbjct: 322 KRVEPDFKA-----YTIMIAELNRAGMRTEADALNRFYQKHVRQNESAPA 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 10/263 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I ++V +I+T C V ALE+ + + P+ VTY L G +GR+ +A
Sbjct: 44 IKRDVVVDTILIDTLCKNRLVVPALEVLKRM-KDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L EM +K + + ++ LI + + G L K + ++ + + + + ++ +
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ R EA+ ++ + VT + L K + L D M P
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM-----PQR 217
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
A N+ + N ++ F GK AL F S ++ YN +++ NG
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDLALGVF----GYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 263 LSEAETLFEELCSKSLSPDVPTH 285
+ +A + FE + D+ T+
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITY 296
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+YN++I+ + +G +D A+EL ++ +A P TY L GF AG++ A+
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMEL-KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ EM N G + +N I + G + ++FDE+ L D V T + F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
NG D E +K + F T N L+ + G QA ++ +MLD P+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 205 AVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNN--------- 252
T+N ++ G + ++ LA K N + + Y N
Sbjct: 526 -----TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 253 ---------------------IISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
++ C+ LL EAE F EL + SPD+ T + VS
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCD--LLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 292 AG 293
G
Sbjct: 639 YG 640
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 43/303 (14%)
Query: 23 IVPNIVSYNNVINTHCDEGRV-DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
I P+ +YN +I T C G + A +++ + A A F VTY L + + R E
Sbjct: 275 IAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
A+ +L EM+ G + YN+LIS + G LD+A EL +++ E+ D T +
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM------- 194
F G+ + AM ++ + + K T N +++ GK T+ +FD++
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 195 ----------------LDNHTPPNFQAVN-------SDTFNIMVNECFNLGKFHEALATF 231
+D+ F+ + +TFN +++ G F +A+ +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 232 RK---AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFAC 288
R+ AG D++ YN +++ G+ ++E + E+ P+ T+ +
Sbjct: 513 RRMLDAGVTP-------DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 289 VSA 291
+ A
Sbjct: 566 LHA 568
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 56/322 (17%)
Query: 5 KRYNEAIALFHFFFTQSN---IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGP 61
K+++ A+ F +F Q + ++ N V +I+ EGRV A ++ + F
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSV-VAIIISMLGKEGRVSSAANMFNGLQEDG-FSL 206
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL------- 114
+Y L F ++GR EA+++ ++M G + YN +++ F ++G
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 115 -----------------------------DKANELFDELKERCLVYDGVVNATYMEWFFN 145
+A ++F+E+K YD V ++ +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+ R KEAM ++ F + VT N L+ + G +A L +QM + T P+
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF- 385
Query: 206 VNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
T+ +++ GK A++ F R AG K N + +N I + G
Sbjct: 386 ----TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN-------ICTFNAFIKMYGNRGK 434
Query: 263 LSEAETLFEELCSKSLSPDVPT 284
+E +F+E+ LSPD+ T
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVT 456
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 118/304 (38%), Gaps = 57/304 (18%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P+IV++N ++ G +++ + A F P T+ L + G +A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-RC----LVYDGVVNA 137
+ + R ML+ G D YN +++ G +++ ++ E+++ RC L Y +++A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 138 TYMEWFFNNGRD------------------------------------KEAMDSYKSLMD 161
+ NG++ EA ++ L +
Sbjct: 569 ------YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 162 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 221
R F T N ++ + + +A + D M + P+ NS + M + +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY--MHSRSADF 680
Query: 222 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
GK E L G K D+ YN +I +C N + +A +F E+ + + PD
Sbjct: 681 GKSEEILREILAKGIKP-------DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 282 VPTH 285
V T+
Sbjct: 734 VITY 737
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 97 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 156
D+ V +IS + G + A +F+ L+E D + + F N+GR +EA++ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 157 KSLMDRQFKMTPVTCNVLLEVLLKHGKK-TQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 215
K + + K T +T NV+L V K G + +L ++M + P ++ T+N ++
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-----DAYTYNTLI 286
Query: 216 NECFNLGKFHEALAT----FRKAG---------------TKSNSKAFAMDV--------- 247
C G H+ A + AG KS+ AM V
Sbjct: 287 T-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 248 ----AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
YN++IS + +G+L EA L ++ K PDV T+ +S
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+I+SYN VI +C R+ A ++ + + P +TY + + EA
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ ++R M+ G + YN+++ G+ +L D+A ++L+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 32/269 (11%)
Query: 25 PNIVSYNNVINTHCDEGRV----DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
PN ++Y ++++ + + + +A E+Y +I P AV + L +
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE-----PRAVLLKTLVLVCSKCDLLP 611
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
EA E+ +G D N+++S + + KAN + D +KER ATY
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS---MATYN 668
Query: 141 EWFFNNGRDKE---AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ + R + + + + ++ + K ++ N ++ ++ + A +F +M ++
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNII 254
P+ T+N + F EA+ R K G + N YN+I+
Sbjct: 729 GIVPDVI-----TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT-------YNSIV 776
Query: 255 SRFCENGLLSEAETLFEELCSKSLSPDVP 283
+C+ EA+ E+L ++L P P
Sbjct: 777 DGYCKLNRKDEAKLFVEDL--RNLDPHAP 803
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 38/316 (12%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+ EA+ +F + + P+ VSY +++ C D+A Y + +TY
Sbjct: 389 FKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRITY 446
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+ G G + EA+ LL EM G D + Y+ LI+GF ++G A E+ +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
L +G++ +T + G KEA+ Y++++ T NVL+ L K GK +
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR-------------- 232
A M + P N+ +F+ ++N N G+ +A + F
Sbjct: 567 AEEFMRCMTSDGILP-----NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 233 --------KAGTKSNSKAF---------AMDVAGYNNIISRFCENGLLSEAETLFEELCS 275
K G ++ F A+D YN +++ C++G L++A +LF E+
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 681
Query: 276 KSLSPDVPTHFACVSA 291
+S+ PD T+ + +S
Sbjct: 682 RSILPDSYTYTSLISG 697
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 16/290 (5%)
Query: 6 RYNEAIALFHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
+ E ++++ F + I P++ ++N +IN C EG + + L + + + + P+
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPTI 268
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
VTY + + GR A++LL M +KG AD YN LI + K L +
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKH 181
+++R + + V T + F N G+ A ++ F ++P VT N L++ +
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALIDGHISE 386
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 241
G +A +F M P + ++ ++++ +F A + + K N
Sbjct: 387 GNFKEALKMFYMMEAKGLTP-----SEVSYGVLLDGLCKNAEFDLARGFYMR--MKRN-- 437
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ Y +I C+NG L EA L E+ + PD+ T+ A ++
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S P IV+YN V++ +C +GR A+EL H + + TY L + RI
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH-MKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+ LLR+M + + + YN LI+GF G + A++L +E+ L + V
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ + G KEA+ + + + + V+ VLL+ L K+ + A + +M N
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
V T+ M++ G EA+ + + D+ Y+ +I+ FC+
Sbjct: 440 -----CVGRITYTGMIDGLCKNGFLDEAVVLLNEM----SKDGIDPDIVTYSALINGFCK 490
Query: 260 NGLLSEAETLFEELCSKSLSPD 281
G A+ + + LSP+
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPN 512
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 124/295 (42%), Gaps = 18/295 (6%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M ++ +A++LF Q +I+P+ +Y ++I+ C +G+ +A+ + A
Sbjct: 663 MCKSGNLAKAVSLFGEM-VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ V Y G AG+ + +M N GH D + N +I G+ +G ++K N+L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 121 FDELKERCLVYDGVVN-ATYMEWFFNNGRDKEAMDS---YKSLMDRQFKMTPVTCNVLLE 176
E+ + +G N TY + K+ S Y+S++ +TC+ L+
Sbjct: 782 LPEMGNQ----NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 177 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
+ + + + V+ TFN+++++C G+ + A +
Sbjct: 838 GICESNMLEIGLKILKAFICRGVE-----VDRYTFNMLISKCCANGEINWAFDLVKVM-- 890
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
S ++D + ++S N E+ + E+ + +SP+ + ++
Sbjct: 891 --TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 15/274 (5%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
F T I+PN VS++ +IN + + G A ++ + P+ TY L KG
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH-PTFFTYGSLLKGL 628
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G + EA L+ + D+++YN L++ + GNL KA LF E+ +R ++ D
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-TPVTCNVLLEVLLKHGKKTQAWALFD 192
+ + G+ A+ K R + V ++ + K G + +A F
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG-QWKAGIYFR 747
Query: 193 QMLDN--HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 250
+ +DN HTP + T N M++ +GK + + G ++ ++ Y
Sbjct: 748 EQMDNLGHTP------DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP----NLTTY 797
Query: 251 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
N ++ + + +S + L+ + + PD T
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+V++ +IN C G +D A +L++ ++ P + Y L G+ AG +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L + L+KG D +V+++ I +++ G+L A+ ++ + + + + V ++
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF- 203
+GR EA Y ++ R + + VT + L++ K G +AL++ M+ PP+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 204 ---------------------------QAV--NSDTFNIMVNECFNLGKFHEALATFRKA 234
Q++ N FN +++ L +F EAL FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G DVA + ++ G L EA LF + L PD + + A
Sbjct: 523 GIY----GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+Y+++I+ C G + LY +I + P V Y L G G ++ A+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG-YPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ML + + +V+N+LI G+ L D+A ++F + + D T M
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 145 NNGRDKEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
GR +EA+ L R FKM + L++ KH K T LFD M N
Sbjct: 543 MEGRLEEAL----FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
+ N ++++ F + +A F D+ YN +I +C
Sbjct: 599 ADIAVCN-----VVIHLLFKCHRIEDASKFFNNL----IEGKMEPDIVTYNTMICGYCSL 649
Query: 261 GLLSEAETLFEELCSKSLSPDVPT 284
L EAE +FE L P+ T
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVT 673
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 38/302 (12%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FH + IVS N V+ + +++VA L ++ P P+ VT+ L GF
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGP-APNVVTFCTLINGF 296
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G + A DL + M +G D + Y+ LI G+ + G L ++LF + + + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
VV ++ ++ + +G A YK ++ + VT +L++ L + G+ +A+ ++ Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR--------------------- 232
+L P+ T++ +++ G A +
Sbjct: 417 ILKRGMEPSIV-----TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 233 -KAGTKSNSKAFAMDVAG---------YNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
K G ++ F++ + G +N++I +C EA +F + + PDV
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 283 PT 284
T
Sbjct: 532 AT 533
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+++ R +A F+ + + P+IV+YN +I +C R+D A ++ ++ PFG
Sbjct: 611 LFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFG 668
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ VT L + A+ + M KG +++ Y L+ F + +++ + +L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F+E++E+ + V + ++ GR EA + + +D + V +L+ K
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 181 HGKKTQAWALFDQMLDNHTPPN 202
G+ +A L++ ML N P+
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 36/309 (11%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R++EA+ +F I P++ ++ V+ EGR++ AL L+ + P
Sbjct: 508 RLNRFDEALKVFRLMGIY-GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG-LEPD 565
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
A+ Y L F + L L M AD V N +I + ++ A++ F+
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
L E + D V T + + + R EA ++ L F VT +L+ VL K+
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 183 KKTQAWALFDQMLDNHTPPN-----------------------FQAVNSD-------TFN 212
A +F M + + PN F+ + +++
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 213 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
I+++ G+ EA F +A ++K DV Y +I +C+ G L EA L+E
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQA---IDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 273 LCSKSLSPD 281
+ + PD
Sbjct: 802 MLRNGVKPD 810
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 17/287 (5%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+V +N++I+ C R D AL+++R ++ P T+ + + I GR+ EAL L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
M G D+L Y LI F + +LFD ++ + D V + F
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
R ++A + +L++ + + VT N ++ + +A +F+ + PN
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN--- 670
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ T I+++ A+ F + G+K N+ Y ++ F ++
Sbjct: 671 --TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA-------VTYGCLMDWFSKSVD 721
Query: 263 LSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKYWNA 309
+ + LFEE+ K +SP + ++ + RG AT+ + A
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGL-CKRGRVDEATNIFHQA 767
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I P+IVSY+ +I+ C GRVD A ++ I A P V Y L +G+ GR+
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRL 792
Query: 80 VEALDLLREMLNKGHGADSLVYNNL 104
VEA L ML G D L+ L
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 47/269 (17%)
Query: 18 FTQSNIVPNIVSYNN-VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
+ I P+ VS + V++ +G V AL+ +R ++ F V+ + KG +S
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKG-LSV 264
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
+I A LL +L+ G + + + LI+GF + G +D+A +LF +++R + D +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+T ++ +F G + + + K+ V + ++V +K G A ++ +ML
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
PN V Y +I
Sbjct: 385 QGISPN--------------------------------------------VVTYTILIKG 400
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTH 285
C++G + EA ++ ++ + + P + T+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 17/279 (6%)
Query: 14 FHFF--FTQSNIVPNIVSYNNVINTHC-DEGRVDVALELYRHIIATAPFGPSAVTYRHLT 70
F F+ + + P + S N +I C ++G VD L+++ + P + TY L
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG-CDPDSYTYGTLI 199
Query: 71 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 130
G GRI EA L EM+ K + Y +LI+G N+D+A +E+K + +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 131 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 190
+ ++ M+ +GR +AM+ ++ +M R + VT L+ L K K +A L
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 191 FDQMLDNHTPPNFQAVNSDT--FNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAM 245
D+M N Q + D + +++ + KF EA L G N + +
Sbjct: 320 LDRM-------NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
V N ++ C N S A TL+ + S+ +S +V T
Sbjct: 373 HVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVET 410
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 11/237 (4%)
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L KG AG I ++ DLL E+ G + ++Y LI G + G ++KA +LF E+ +
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
LV + + F NG K+ + Y+ + + T N ++ L K G+ A+
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
+FD+M + N T+N ++ K +EA K + S ++
Sbjct: 289 QVFDEMRERGVSCNIV-----TYNTLIGGLCREMKLNEA----NKVVDQMKSDGINPNLI 339
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSK 305
YN +I FC G L +A +L +L S+ LSP + T+ VS G R T+ +K
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS--GFCRKGDTSGAAK 394
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
NIV+YN +I C E +++ A ++ + + P+ +TY L GF G++ +AL L
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG-INPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
R++ ++G + YN L+SGF G+ A ++ E++ER + V ++ F
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+ ++A+ S+ + T +VL+ G+ +A LF M++ + P
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP---- 476
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
N +N M+ G + AL ++ K A +VA Y +I C+ E
Sbjct: 477 -NEVIYNTMILGYCKEGSSYRALKLLKEM----EEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 266 AETLFEELCSKSLSP 280
AE L E++ + P
Sbjct: 532 AERLVEKMIDSGIDP 546
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 10/266 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ + PN+ +YN V+N C +GR A +++ + + VTY L G ++
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGGLCREMKL 319
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA ++ +M + G + + YN LI GF +G L KA L +LK R L V
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ F G A K + +R K + VT +L++ + +A L M +
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ T++++++ G+ +EA F+ K+ + YN +I +C+
Sbjct: 440 VPDVH-----TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI----YNTMILGYCK 490
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTH 285
G A L +E+ K L+P+V ++
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASY 516
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+V N +Y +IN G E+Y + F P+ TY + GR +A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDA 287
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ EM +G + + YN LI G L++AN++ D++K + + + T ++
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F G+ +A+ + L R + VT N+L+ + G + A + +M + P
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP- 406
Query: 203 FQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
+ T+ I+++ N+ K + + + G DV Y+ +I FC
Sbjct: 407 ----SKVTYTILIDTFARSDNMEKAIQLRLSMEELG-------LVPDVHTYSVLIHGFCI 455
Query: 260 NGLLSEAETLFEELCSKSLSPD 281
G ++EA LF+ + K+ P+
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPN 477
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+YN +++ C +G A ++ + + PS VTY L F + + +A+
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L M G D Y+ LI GF G +++A+ LF + E+ + V+ T + +
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G A+ K + +++ + ++EVL K K +A L ++M+D+ P+
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P++ + + V+N +C G VD A+ + ++ + VTY L G+ G +
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+LR M +G + + Y +LI G+ + G +++A +F+ LKE+ LV D + M+
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ G+ ++A+ + ++++ + CN L+ K G+ +A +F +M D P+
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
T+N +V+ G EAL K + K V YN ++ + G
Sbjct: 401 HH-----TYNTLVDGYCRAGYVDEAL----KLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 263 LSEAETLFEELCSKSLSPD 281
+ +L++ + + ++ D
Sbjct: 452 FHDVLSLWKMMLKRGVNAD 470
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 11/289 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R + +A+ + H + + N N++IN +C G++ A +++ + P
Sbjct: 343 RTGQIRDAVRV-HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM-NDWSLKPD 400
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY L G+ AG + EAL L +M K + YN L+ G+ +G L+
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ +R + D + +T +E F G EAM +++++ R +T NV++ L K
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K +A + D + P Q T+ + + + +G EA A K
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQ-----TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPT 575
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
M YN +IS + L++ L EL ++ L+P V T+ A ++
Sbjct: 576 IEM----YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+VPN + YN I C G+++ A +L+ ++++ F P TY L G AG I +A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L EM KG + + YN LI G +LGN+D+A L +L ++ + + + T ++
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 143 FFNNGRDKEAMDSYKSLMDR 162
+G EAM + ++++
Sbjct: 835 LVKSGNVAEAMRLKEKMIEK 854
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 124/287 (43%), Gaps = 11/287 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+++ +NEA+ L+ + ++ + ++ N +I+ C +V+ A E+ ++
Sbjct: 481 LFKLGDFNEAMKLWENVLARG-LLTDTITLNVMISGLCKMEKVNEAKEILDNV-NIFRCK 538
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ TY+ L+ G+ G + EA + M KG +YN LISG + +L+K +L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
EL+ R L + + N G +A + ++++ + C+ + L +
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 181 HGKKTQAWALFDQMLD-NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
K +A L +++D + P +Q++ + C K E++ +
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSL-KEFLEASATTCLKTQKIAESVE------NSTP 711
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS-LSPDVPTH 285
K + YN I+ C+ G L +A LF +L S PD T+
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A + +A LF + +P+ +Y +I+ G ++ A L R +A P+
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL-RDEMALKGIIPN 789
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L KG G + A LL ++ KG +++ YN LI G ++ GN+ +A L +
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Query: 123 ELKERCLV 130
++ E+ LV
Sbjct: 850 KMIEKGLV 857
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 20/277 (7%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGP 61
++ R+ EA + H + +VP I +YN +++ C G D A+EL++H+ + P
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL--KSRVKP 186
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
+TY L G + R+ ++RE+ G+ +++ Y ++ + + ++K +LF
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK-MTPVTCNVLLEVLLK 180
++K+ +DG N + GR +EA + L+ + V+ N LL + K
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 181 HGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGT 236
G L +++ + P ++ T I+VN N+G A LA + G
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDY------THTIIVNGLLNIGNTGGAEKHLACIGEMGM 360
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+ + V N +I C+ G + A LF +
Sbjct: 361 QPS-------VVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 119/305 (39%), Gaps = 46/305 (15%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
++P++++YN +I + +D A + R + A P TY L G +
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRM-REAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY--- 139
L L EML+ G D YN L+S + +LG +A ++ E + G+ TY
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGI--DTYNIL 160
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA-WALFDQMLDNH 198
++ +G A++ +K L R K +T N+L+ L K + W + + +
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS-------------------- 238
TP N+ T+ M+ F + + L F K +
Sbjct: 220 TP------NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 239 ------------NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHF 286
S + D+ YN +++ + ++G L + L EE+ K L PD TH
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 287 ACVSA 291
V+
Sbjct: 334 IIVNG 338
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 133/318 (41%), Gaps = 37/318 (11%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
A +++EA +L + +I P++++YN ++ G+VD AL+++ + A P+
Sbjct: 321 AGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNL 377
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
TY L AG++ A +L M G + N ++ + LD+A +F+E
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ + D + + ++ GR +A Y+ ++D + + L++ HG+
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNS------------------------------DTFNI 213
K ++ M++ + P+ Q +N+ +++I
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 214 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+++ G +E F + +D YN +I FC+ G +++A L EE+
Sbjct: 558 LIHGLIKAGFANETYELFYSM----KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 274 CSKSLSPDVPTHFACVSA 291
+K P V T+ + +
Sbjct: 614 KTKGFEPTVVTYGSVIDG 631
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 18/301 (5%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M++A + A+F + VP+ SY+ +I+ G + EL+ +
Sbjct: 527 MFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
+ Y + GF G++ +A LL EM KG + Y ++I G ++ LD+A L
Sbjct: 586 DTR-AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F+E K + + + V+ ++ ++ F GR EA + LM + T N LL+ L+K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA---TFRKAGTK 237
+ +A F M + P N T+ I++N + KF++A +K G K
Sbjct: 705 AEEINEALVCFQSMKELKCTP-----NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA-AGGSR 296
++ Y +IS + G ++EA LF+ + PD + A + + G+R
Sbjct: 760 PST-------ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 297 G 297
Sbjct: 813 A 813
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI---IATAPFGPSAVTYRHLTKGFISA 76
++ + PN+ + N +++ C ++D A ++ + + T P +T+ L G
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT----PDEITFCSLIDGLGKV 460
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
GR+ +A + +ML+ +S+VY +LI F G + ++++ ++ + D +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
TYM+ F G ++ ++ + R+F + ++L+ L+K G + + LF M +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
+++ +NI+++ GK ++A + T K F V Y ++I
Sbjct: 581 QGC-----VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT----KGFEPTVVTYGSVIDG 631
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ L EA LFEE SK + +V + + + G
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 11/260 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P +Y +I D+ L L++ + + P+ + L +GF GR+ AL
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM + AD ++YN I F ++G +D A + F E++ L D V + +
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
R EA++ ++ L + N ++ GK +A++L ++ + P+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
A +N ++ +GK EAL F + K A +++ YN +I C G L
Sbjct: 345 A-----YNCILTCLRKMGKVDEALKVFEEM-----KKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 265 EAETLFEELCSKSLSPDVPT 284
A L + + L P+V T
Sbjct: 395 TAFELRDSMQKAGLFPNVRT 414
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 53/291 (18%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R + A++L S++ +IV YN I++ G+VD+A + + I A P VT
Sbjct: 218 RVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-LKPDEVT 275
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + A R+ EA+++ + + YN +I G+ G D+A L +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER-- 333
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ A S S+ + N +L L K GK
Sbjct: 334 ------------------------QRAKGSIPSV---------IAYNCILTCLRKMGKVD 360
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA---TFRKAGTKSNSKA 242
+A +F++M + P N T+NI+++ GK A + +KAG N
Sbjct: 361 EALKVFEEMKKDAAP------NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN--- 411
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
V N ++ R C++ L EA +FEE+ K +PD T + + G
Sbjct: 412 ----VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 46/320 (14%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ R K N AI F ++ ++ + SYN+++ D AL+ ++ A FG
Sbjct: 72 LRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFD-ALDQILGEMSVAGFG 130
Query: 61 PSAVTYRHLTKGFISAGRIVEALD-----------------------------------L 85
PS T + G + A ++ E D L
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
++M G+ ++ LI GF + G +D A L DE+K L D V+ ++ F
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
G+ A + + K VT ++ VL K + +A +F+ + N P A
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
+N M+ + GKF EA + + K + + V YN I++ + G + E
Sbjct: 311 -----YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS----VIAYNCILTCLRKMGKVDE 361
Query: 266 AETLFEELCSKSLSPDVPTH 285
A +FEE+ K +P++ T+
Sbjct: 362 ALKVFEEM-KKDAAPNLSTY 380
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ R +EA + Q + PN+ ++N++++ ++ AL ++ + P+
Sbjct: 669 KVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM-KELKCTPN 726
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L G + +A +EM +G ++ Y +ISG + GN+ +A LFD
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
K V D +E N R +A ++ R + TC VLL+ L K+
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Query: 183 KKTQA 187
QA
Sbjct: 847 CLEQA 851
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 10/272 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
++ I P + +YN ++N VD A ++ ++ + P VTY + KG+ AG+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+A++ LR+M +GH AD + Y +I + L+ E+ E+ + +
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ G+ E +++++ + K VL++ K G A L +M+D
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ T++++VN G+ EAL F A++ Y+++I +
Sbjct: 394 KPDVV-----TYSVVVNGLCKNGRVEEALDYFHTC----RFDGLAINSMFYSSLIDGLGK 444
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G + EAE LFEE+ K + D + A + A
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 45/268 (16%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ NE +F + + PN+ Y +I+ + G V+ A+ L +I F P VT
Sbjct: 342 KLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVT 399
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + G GR+ EALD G +S+ Y++LI G + G +D+A LF+E+
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E+ G +Y N L++ KH K
Sbjct: 460 EK-----GCTRDSY------------------------------CYNALIDAFTKHRKVD 484
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
+A ALF +M + Q V T+ I+++ F + EAL K K
Sbjct: 485 EAIALFKRMEEEEGCD--QTVY--TYTILLSGMFKEHRNEEAL----KLWDMMIDKGITP 536
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEEL 273
A + + + C +G ++ A + +EL
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDEL 564
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 19/269 (7%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R + + I F F T S + N +I + G V+ L ++R + P+
Sbjct: 170 RIRFVSSEIKKFEFPMTVS-------AANALIKSFGKLGMVEELLWVWRKMKENG-IEPT 221
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGH-GADSLVYNNLISGFLELGNLDKANELF 121
TY L G +SA V++ + + E++ G D + YN +I G+ + G KA E
Sbjct: 222 LYTYNFLMNGLVSA-MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL 280
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
+++ R D + T ++ + + + Y+ + ++ ++ P ++++ L K
Sbjct: 281 RDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKE 340
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 241
GK + + +F+ M+ + PN + ++++ G +A+ + +
Sbjct: 341 GKLNEGYTVFENMIRKGSKPNVA-----IYTVLIDGYAKSGSVEDAIRLLHRM----IDE 391
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLF 270
F DV Y+ +++ C+NG + EA F
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
I P+IV+YN +I +C G+ A+E R + T +TY + + +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD-METRGHEADKITYMTMIQACYADSDFGS 310
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
+ L +EM KG ++ +I G + G L++ +F+ + + + + ++
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
+ +G ++A+ ++D FK VT +V++ L K+G+ +A F HT
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF------HTCR 424
Query: 202 -NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
+ A+NS ++ +++ G+ EA F + K ++ D YN +I F ++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR----DSYCYNALIDAFTKH 480
Query: 261 GLLSEAETLFEEL 273
+ EA LF+ +
Sbjct: 481 RKVDEAIALFKRM 493
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 2/218 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A R +EA LF ++ + YN +I+ +VD A+ L++ + +
Sbjct: 444 KAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY L G R EAL L M++KG + + L +G G + +A ++ D
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
EL ++ D + GR KEA + +R ++ V++ L K G
Sbjct: 563 ELAPMGVILDAACE-DMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 220
K A L + F ++ CF+
Sbjct: 622 KADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETCFD 659
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 139/343 (40%), Gaps = 36/343 (10%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++RA +A+ LF+ + N+ PN V+YN +I +C+EG + A E + +
Sbjct: 517 LFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV- 574
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-DSLVYNNLISGFLELGNLDKANE 119
P +YR L G G+ EA + + L+KG+ + + Y L+ GF G L++A
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
+ E+ +R + D V ++ + K K + DR K V +++
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 180 KHGKKTQAWALFDQMLDNHTPPN--------------------------FQAVNSDTFNI 213
K G +A+ ++D M++ PN Q V+S N
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS-VPNQ 752
Query: 214 MVNECFNLGKFHEALATFRKAGTKSNS--KAFAMDVAGYNNIISRFCENGLLSEAETLFE 271
+ CF L + +KA N+ K + A YN +I FC G + EA L
Sbjct: 753 VTYGCF-LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 272 ELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKYWNASTFMG 314
+ +SPD T+ ++ R + WN+ T G
Sbjct: 812 RMIGDGVSPDCITYTTMINEL--CRRNDVKKAIELWNSMTEKG 852
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 25/287 (8%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ N+A+ L+H T I P+I ++ +++ G + A++L+ + A P+ VT
Sbjct: 487 KINKALRLYHEM-TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVT 544
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD--- 122
Y + +G+ G + +A + L+EM KG D+ Y LI G G +A D
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 123 ----ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
EL E C Y G+++ F G+ +EA+ + ++ R + V VL++
Sbjct: 605 KGNCELNEIC--YTGLLHG-----FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
LKH + + L +M D P + + M++ G F EA +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKP-----DDVIYTSMIDAKSKTGDFKEAFGIW---DLMI 709
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
N +V Y +I+ C+ G ++EAE L ++ S P+ T+
Sbjct: 710 NEGCVPNEVT-YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 10/264 (3%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
++ P++V+Y ++ C ++ LE+ ++ F PS L +G G+I E
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGLRKRGKIEE 350
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
AL+L++ +++ G + VYN LI + +A LFD + + L + V + ++
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
F G+ A+ ++D K++ N L+ K G + A +M++ P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
S +M C + GK ++AL + + K A + + ++S G
Sbjct: 471 TVVTYTS----LMGGYC-SKGKINKALRLYHEM----TGKGIAPSIYTFTTLLSGLFRAG 521
Query: 262 LLSEAETLFEELCSKSLSPDVPTH 285
L+ +A LF E+ ++ P+ T+
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTY 545
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 10/251 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN+ YN +I++ C +GR EL + P+ VTY L F G++ A
Sbjct: 363 VSPNLFVYNALIDSLC-KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L L EM++ G YN+LI+G + G++ A E+ + L V + M
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ + G+ +A+ Y + + + T LL L + G A LF++M + + P
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP- 540
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
N T+N+M+ G +A ++ K D Y +I C G
Sbjct: 541 ----NRVTYNVMIEGYCEEGDMSKAFEFLKEM----TEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 263 LSEAETLFEEL 273
SEA+ + L
Sbjct: 593 ASEAKVFVDGL 603
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+ EA ++ + VPN V+Y VIN C G V+ A L + + P+ VTY
Sbjct: 698 FKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTY 755
Query: 67 ----RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
LTKG + + VE L + KG A++ YN LI GF G +++A+EL
Sbjct: 756 GCFLDILTKGEVDMQKAVE----LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + D + T + K+A++ + S+ ++ + V N L+ G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
+ +A L ++ML PN + + T N
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 19/273 (6%)
Query: 13 LFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG 72
+F+ + I N+ ++N +IN C EG++ A + + I+ P+ VTY L +G
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA-KGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 73 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
F GRI A ++ EM +KG D YN ++S G +A+E+ E+KE LV D
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPD 326
Query: 133 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV--TCNVLLEVLLKHGKKTQAWAL 190
V + NNG D E +Y+ M +Q M P T N L+ L K A L
Sbjct: 327 SVSYNILIRGCSNNG-DLEMAFAYRDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 191 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS-NSKAFAMDVAG 249
++ + ++S T+NI++N G +A A + T F
Sbjct: 385 IREIREKGI-----VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT----- 434
Query: 250 YNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
Y ++I C EA+ LFE++ K + PD+
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ +YN +++ C+EGR L + I P +V+Y L +G + G + A
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLREMKEI----GLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EM+ +G YN LI G ++ A L E++E+ +V D V + +
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+G K+A + +M + T T L+ VL + K +A LF++++ P+
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+N+ +M C +G A + ++ S + D YN ++ C G
Sbjct: 469 MMNT----LMDGHC-AIGNMDRAFSLLKEMDMMSINP----DDVTYNCLMRGLCGEGKFE 519
Query: 265 EAETLFEELCSKSLSPD 281
EA L E+ + + PD
Sbjct: 520 EARELMGEMKRRGIKPD 536
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 3/245 (1%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA + + IV + V+YN +IN +C G A L+ ++ T P+ TY
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTS 437
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L + EA +L +++ KG D ++ N L+ G +GN+D+A L E+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
+ D V M G+ +EA + + R K ++ N L+ K G A+
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
+ D+ML P N+ + N+ L + E L + G N +F +
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE--ELLREMKSEGIVPNDSSFCSVIE 615
Query: 249 GYNNI 253
+N+
Sbjct: 616 AMSNL 620
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 26/282 (9%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA----LELYRHIIATAPFG 60
+ +EAI F + + P + N+++ R++ A ++YR I + +
Sbjct: 169 RMVDEAIECF-YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVY- 226
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
T+ + G++ +A L M G + YN L+ GF G ++ A +
Sbjct: 227 ----TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLI 282
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVL 178
E+K + D + W N GR E + K + + P V+ N+L+
Sbjct: 283 ISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK-----EIGLVPDSVSYNILIRGC 337
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
+G A+A D+M+ P F T+N +++ F K A R+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFY-----TYNTLIHGLFMENKIEAAEILIREI---- 388
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 280
K +D YN +I+ +C++G +A L +E+ + + P
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 28/263 (10%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
+++++ C +G++D AL L + +I + P +T+ HL G AG I +A L+REM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVI-PGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-----KERCLVYDGVVNATYMEWFF 144
G + + YN LI G + N+DKA LF+ + + + + +V+A +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 145 NNGRDK---EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
N K E +DS ++ + V C +L++ K+G QA ++ +M + P
Sbjct: 243 GNNNKKLLEEILDSSQA----NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP- 297
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
+S +N+++ + G A + K G DV YN +IS C
Sbjct: 298 ----ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP-------DVFTYNTLISALC 346
Query: 259 ENGLLSEAETLFEELCSKSLSPD 281
+ G EA L + + ++PD
Sbjct: 347 KEGKFDEACDLHGTMQNGGVAPD 369
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 10/267 (3%)
Query: 19 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 78
+Q+N +IV ++++ G V ALE+++ + + +V Y + +G S+G
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM-SQKNVPADSVVYNVIIRGLCSSGN 315
Query: 79 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 138
+V A + +M+ +G D YN LIS + G D+A +L ++ + D +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
++ +G A + S++ + NV+++ ++G + A ++ + ML
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
PN T N +++ G+ +A + S D YN ++ C
Sbjct: 436 VKPNVY-----TNNALIHGYVKGGRLIDAWW----VKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTH 285
G L A L++E+ + PD+ T+
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITY 513
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 117/309 (37%), Gaps = 53/309 (17%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELY----RHIIATAPFGPSAVTYRHLTKGFI------ 74
PN VSYN +I C VD AL L+ ++ I + + + KG I
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 75 ----------------------------SAGRIVEALDLLREMLNKGHGADSLVYNNLIS 106
G +V+AL++ +EM K ADS+VYN +I
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 107 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 166
G GN+ A ++ +R + D T + G+ EA D + ++ +
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 167 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 226
++ V+++ L HG +A ML + P +N++++ G
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVL-----LWNVVIDGYGRYGDTSS 423
Query: 227 ALATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 283
AL+ G K N V N +I + + G L +A + E+ S + PD
Sbjct: 424 ALSVLNLMLSYGVKPN-------VYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476
Query: 284 THFACVSAA 292
T+ + AA
Sbjct: 477 TYNLLLGAA 485
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ I P++++YN +IN +C +GRV A EL ++ P+ T+ L +G G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD-----ELKERCLVYD 132
+ +A+ LL+ ML+ G D + YN LI G G+++ A +L +++ CL +
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 133 GVVNA------------------------------TYMEWFFNNGRDKEAMDSYKSLMDR 162
++NA T ++ G+ ++A+ ++L+
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 163 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 222
+ TP + NV+L++L K K + A+ ++ P+ T+ +V+ L
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV-----TYTTLVD---GLI 592
Query: 223 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
+ + +FR S +V Y II+ C+ G + EAE L + +SP+
Sbjct: 593 RSGDITGSFRILELMKLSGCLP-NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 283 PTH 285
T+
Sbjct: 652 VTY 654
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R +A+ +F + PN VSY+ +I+ C+ GR++ A L + + PS
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPS 300
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY L K G I +A +L EM+ +G + Y LI G G +++AN +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 123 EL-KER----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
++ K+R + Y+ ++N + +GR A + + R K T N L+E
Sbjct: 361 KMVKDRIFPSVITYNALING-----YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
L + GK +A L +MLDN P+ ++N++++ G + A K +
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIV-----SYNVLIDGLCREGHMNTAY----KLLSS 466
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
N D + II+ FC+ G A + K +S D
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 9/246 (3%)
Query: 46 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 105
AL+++ + P++V+Y L G GR+ EA L +M KG + Y LI
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 106 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 165
+ G +DKA LFDE+ R + ++ +G+ +EA + ++ +
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 166 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 225
+ +T N L+ K G+ A+ L M PN + TFN ++ +GK +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR-----TFNELMEGLCRVGKPY 423
Query: 226 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+A+ ++ + D+ YN +I C G ++ A L + + PD T
Sbjct: 424 KAVHLLKRM----LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 286 FACVSA 291
A ++A
Sbjct: 480 TAIINA 485
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 41/269 (15%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
S +PN+ Y +IN C GRV+ A +L + + P+ VTY + KG+++ G++
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA-MQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGF-LELGNLDKAN--------------ELFDELK 125
AL+ +R M+ +G+ + +Y++L+ GF L +D + E +EL
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELI 728
Query: 126 ERCLVYDGVVNAT---YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
G ++ + GR E+ D +++++R + ++++E
Sbjct: 729 SVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKK 787
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
K T+ L +L + P+F++ F + +K G ++
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKS------------------FCLVIQGLKKEGDAERARE 829
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFE 271
M++ N ++ + +G+L+ E L E
Sbjct: 830 LVMELLTSNGVVEK---SGVLTYVECLME 855
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 11/236 (4%)
Query: 50 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 109
YR + A F + YR + G A + ++L G DS + +L+ GF
Sbjct: 183 YRRMEADG-FVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 110 ELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 168
NL A ++FD + KE + V + + GR +EA + ++ + +
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 169 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 228
T VL++ L G +A+ LFD+M+ PN T+ ++++ GK EA
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-----TYTVLIDGLCRDGKIEEAN 356
Query: 229 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
RK + F V YN +I+ +C++G + A L + ++ P+V T
Sbjct: 357 GVCRKM---VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 32/228 (14%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
PS VTY L G I +G I + +L M G + Y +I+G + G +++A +L
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
+++ + + V ++ + NNG+ A+++ +++++R +++ + LL
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL----- 693
Query: 181 HGKKTQAWALFDQMLDNHTPPN-----FQAVNSDTFNIMVNECFNLGKFHEALATFR--- 232
Q + L + +DN + + + N +++ LG L F
Sbjct: 694 -----QGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR 748
Query: 233 --KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA--ETLFEELCSK 276
K G S N+++ E G+ E + + E CSK
Sbjct: 749 LCKEGRTDES----------NDLVQNVLERGVFLEKAMDIIMESYCSK 786
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 39/303 (12%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
Q + N+V+Y +I+ CD R+ A EL+ + TA P+ +Y L GF+ A +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNM 488
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
AL+LL E+ +G D L+Y I G L ++ A + +E+KE + + ++ T
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW----------- 188
M+ +F +G E + + + ++T VT VL++ L K+ ++A
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 189 -----ALFDQMLDNHTPPNFQAVNSDTFNIMVNEC---------------FNLGKFHEAL 228
A+F M+D N + F MV + F G EAL
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 229 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFAC 288
A K +D+ Y +++ L +A + EE+ + + PD C
Sbjct: 669 ALRDKMA----EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD---EVLC 721
Query: 289 VSA 291
+S
Sbjct: 722 ISV 724
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRH----------------IIATAPFGP------- 61
PN+VSY+ +++ C EG + A++ Y I A G
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 62 -----------SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 110
+ VTY L G A R+ EA +L +M G + YN LI GF++
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 111 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 170
N+D+A EL +ELK R + D ++ T++ + + + A + + K +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
L++ K G T+ L D+M + V TF ++++ +A+
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDI-----EVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
F + SN + A + +I C++ + A TLFE++ K L PD
Sbjct: 600 FNRI---SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 11/281 (3%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EAI F + + P S N +++ G+ D ++ +I P+ TY
Sbjct: 210 EAIQCFSKM-KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA-RPTVFTYNI 267
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
+ G + A L EM +G D++ YN++I GF ++G LD F+E+K+ C
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
D + + F G+ ++ Y+ + K V+ + L++ K G QA
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
+ M P N T+ +++ +G +A + G + +V
Sbjct: 388 KFYVDMRRVGLVP-----NEYTYTSLIDANCKIGNLSDAF----RLGNEMLQVGVEWNVV 438
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
Y +I C+ + EAE LF ++ + + P++ ++ A +
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 14/260 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P + +YN +I+ C EG V+ A L+ + P VTY + GF GR+ + +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EM + D + YN LI+ F + G L E + E+K L + V +T ++ F
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G ++A+ Y + R+ + P T L++ K G + A+ L ++ML N
Sbjct: 379 KEGMMQQAIKFYVDM--RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
T+ +++ + + EA F K T ++A YN +I F +
Sbjct: 437 VV-----TYTALIDGLCDAERMKEAEELFGKMDTA----GVIPNLASYNALIHGFVKAKN 487
Query: 263 LSEAETLFEELCSKSLSPDV 282
+ A L EL + + PD+
Sbjct: 488 MDRALELLNELKGRGIKPDL 507
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 100 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT-YMEWFFNNGRDKEAMDSYKS 158
V++ L S ++LG L++A + F ++K R V+ + + F G+ + +K
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMK-RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 159 LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 218
++ + T T N++++ + K G A LF++M P+ + T+N M++
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD-----TVTYNSMIDGF 307
Query: 219 FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
+G+ + + F + DV YN +I+ FC+ G L + E+ L
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEP----DVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 279 SPDVPTHFACVSA 291
P+V ++ V A
Sbjct: 364 KPNVVSYSTLVDA 376
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K ++A+ F+ + N + +I+ C + +V+ A L+ ++ P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG-LVPD 647
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
Y L G G ++EAL L +M G D L Y +L+ G L KA +
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 164
E+ + D V+ + ++ + G EA++ LM Q
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I ++ Y ++I+ +C +G + A L+ + PS+ TY L G G +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG-LSPSSYTYGALIDGVCKVGEM 380
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
A L+ EM +KG +V+N LI G+ G +D+A+ ++D ++++ D T
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
F R EA +M+ K++ V+ L++V K G +A LF +M
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P N+ T+N+M+ GK EA RK + D Y ++I C
Sbjct: 501 QP-----NAITYNVMIYAYCKQGKIKEA----RKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ EA LF E+ K L + T+ +S
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
F+ I P +YN +IN + + R +E ++ + VTY L + + G
Sbjct: 250 FSVKGIKPEAYTYNTIINAYVKQ-RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
++ +A L EM +G +D VY +LIS GN+ +A LFDEL E+ L
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++ G A + + +T V N L++ + G +A ++D M
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM--- 425
Query: 198 HTPPNFQAVNSDTFNI-MVNECFN-LGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNN 252
FQA D F + CFN L ++ EA L + G K + Y N
Sbjct: 426 -EQKGFQA---DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK-------LSTVSYTN 474
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+I +C+ G + EA+ LF E+ SK + P+ T+ + A
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R KRY+EA + F + + + VSY N+I+ +C EG V+ A L+ + ++ P+
Sbjct: 446 RLKRYDEA-KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM-SSKGVQPN 503
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
A+TY + + G+I EA L M G DS Y +LI G N+D+A LF
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 164
E+ + L + V + G+ EA Y + + +
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA LF + + PN ++YN +I +C +G++ A +L ++ A P + TY
Sbjct: 487 EAKRLF-VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG-MDPDSYTYTS 544
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L G A + EA+ L EM KG +S+ Y +ISG + G D+A L+DE+K +
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 129 LVYDGVV 135
D V
Sbjct: 605 YTIDNKV 611
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 11/262 (4%)
Query: 25 PNIVSYNNVINTHC-DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 83
P++ +YN ++ +E +A +Y ++ P+ T+ L G GR +A
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEML-KCNCSPNLYTFGILMDGLYKKGRTSDAQ 218
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
+ +M +G + + Y LISG + G+ D A +LF E++ D V + ++ F
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
GR EA + + F + + L++ L + + TQA+ L+ ML + P+
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
+ I++ GK +AL K + SK + D YN +I C GLL
Sbjct: 339 I-----LYTILIQGLSKAGKIEDAL----KLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 264 SEAETLFEELCSKSLSPDVPTH 285
E +L E+ PD TH
Sbjct: 390 EEGRSLQLEMSETESFPDACTH 411
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ N PN+ ++ +++ +GR A +++ + P+ VTY L G G
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG-ISPNRVTYTILISGLCQRGSA 249
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+A L EM G+ DS+ +N L+ GF +LG + +A EL ++ V ++
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
++ F R +A + Y +++ + K + +L++ L K GK A L M
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ + +N ++ G E + + S +++F D + +I C
Sbjct: 370 SPD-----TYCYNAVIKALCGRGLLEEGRSLQLEM---SETESFP-DACTHTILICSMCR 420
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
NGL+ EAE +F E+ SP V T A +
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 121/283 (42%), Gaps = 13/283 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R EA L F + V + Y+++I+ R A ELY +++ P +
Sbjct: 283 RMVEAFELLRLF-EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN-IKPDIIL 340
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L +G AG+I +AL LL M +KG D+ YN +I G L++ L E+
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E D + + NG +EA + + + + T N L++ L K G+
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 186 QAWALFDQMLDNHTPPNFQAVN---SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+A L +M F ++ + +F+ MV E ++ K + LA F G+
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-ESGSILKAYRDLAHFADTGSSP---- 515
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
D+ YN +I+ FC G + A L L K LSPD T+
Sbjct: 516 ---DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 11/273 (4%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+Y+ R ++A +F T I PN V+Y +I+ C G D A +L+ + + +
Sbjct: 208 LYKKGRTSDAQKMFDDM-TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY- 265
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P +V + L GF GR+VEA +LLR G Y++LI G +A EL
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
+ + ++ + D ++ ++ G+ ++A+ S+ + N +++ L
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
G + +L +M + + P ++ T I++ G EA F T+
Sbjct: 386 RGLLEEGRSLQLEMSETESFP-----DACTHTILICSMCRNGLVREAEEIF----TEIEK 436
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+ VA +N +I C++G L EA L ++
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 29 SYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLL 86
S N +T + G + L+ YR + A G P V+Y L GF AG I AL LL
Sbjct: 484 SGNRSFDTMVESGSI---LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 87 REMLNKGHGADSLVYNNLISGFLELGNLDKANELF---DELKERCLVYDGVVNATYMEWF 143
+ KG DS+ YN LI+G +G ++A +LF D+ + VY + M W
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSL-----MTWS 595
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ A + + + + + T N +E K G+ +A ++++ T +
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERA---LRRLIELDTRKDE 651
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATF 231
+ T ++ C + G+FHEAL F
Sbjct: 652 LTLGPYTI-WLIGLCQS-GRFHEALMVF 677
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 10/266 (3%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+ +N ++N C EG + A +++ I + P+ V++ L G+ G + E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRS-LQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
+M D Y+ LI+ + +D A+ LFDE+ +R L+ + V+ T +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
NG +SY+ ++ + + V N L+ K+G A + D M+ P
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP---- 413
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
+ T+ +++ G AL RK + + +D G++ ++ C+ G + +
Sbjct: 414 -DKITYTTLIDGFCRGGDVETALE-IRK---EMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 266 AETLFEELCSKSLSPDVPTHFACVSA 291
AE E+ + PD T+ + A
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDA 494
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++PN V + +I+ H G +D+ E Y+ +++ P V Y L GF G +
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG-LQPDIVLYNTLVNGFCKNGDL 396
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
V A +++ M+ +G D + Y LI GF G+++ A E+ E+ + + D V +
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-DNH 198
+ GR +A + + ++ K VT ++++ K G + L +M D H
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEA 227
P + T+N+++N LG+ A
Sbjct: 517 VP------SVVTYNVLLNGLCKLGQMKNA 539
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 18/270 (6%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S P++ +Y+ +IN C E ++D A L+ + P+ V + L G G I
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI-PNDVIFTTLIHGHSRNGEI 361
Query: 80 VEALDLLRE----MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 135
DL++E ML+KG D ++YN L++GF + G+L A + D + R L D +
Sbjct: 362 ----DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 136 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
T ++ F G + A++ K + ++ V + L+ + K G+ A +ML
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 255
P+ T+ +M++ G ++ S V YN +++
Sbjct: 478 RAGIKPD-----DVTYTMMMDAFCKKGDAQTGFKLLKEM----QSDGHVPSVVTYNVLLN 528
Query: 256 RFCENGLLSEAETLFEELCSKSLSPDVPTH 285
C+ G + A+ L + + + + PD T+
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITY 558
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 92/233 (39%), Gaps = 13/233 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV YN ++N C G + A + +I P +TY L GF G + AL+
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALE 436
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ +EM G D + ++ L+ G + G + A E+ + D V M+ F
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G + K + + VT NVLL L K G+ A L D ML+ P
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP--- 553
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
+ T+N ++ H A K + D+A Y +I++
Sbjct: 554 --DDITYNTLLEG-------HHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
E+L+ G + V+N L++ F + GN+ A ++FDE+ +R L V T + + G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
E + + + T + L+ L K K A LFD+M PN
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN----- 344
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
+++ + + + +++ K SK D+ YN +++ FC+NG L A
Sbjct: 345 ----DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 268 TLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
+ + + + L PD T+ + G RG
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLID--GFCRG 428
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ KR E L + +VP+ V+YN +I+ D AL + F
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKG-FRID 417
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGH-GADSLVYNNLISGFLELGNLDKANELF 121
+ Y + GR+ EA DL+ EML+KGH D + Y +++GF LG +DKA +L
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
+ + V + G+ EA + + + +T +V++ L +
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 241
GK ++A + +M+ P + N+++ G+ HEA RK + +K
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEI-----NLLLQSLCRDGRTHEA----RKFMEECLNK 588
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
A++V + +I FC+N L A ++ +++ + DV T+ V G
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 9/253 (3%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
+ Y+ +++ C EGR+ A +L +++ P VTY + GF G + +A LL+
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
M GH +++ Y L++G G +A E+ + +E + + + M G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+ EA D + ++ + F PV N+LL+ L + G+ +A ++ L+ A+N
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC-----AIN 593
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
F +++ + AL+ N A DV Y ++ + G ++EA
Sbjct: 594 VVNFTTVIHGFCQNDELDAALSVLDDMYL-INKHA---DVFTYTTLVDTLGKKGRIAEAT 649
Query: 268 TLFEELCSKSLSP 280
L +++ K + P
Sbjct: 650 ELMKKMLHKGIDP 662
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 26/306 (8%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R ++A L T + PN VSY ++N C G+ A E+ ++ + P+
Sbjct: 466 RLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGKSLEAREMM-NMSEEHWWSPN 523
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
++TY + G G++ EA D++REM+ KG + N L+ G +A + +
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 583
Query: 123 E-LKERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP----VTCNVLLE 176
E L + C + VVN T + F N + +D+ S++D + + T L++
Sbjct: 584 ECLNKGCAI--NVVNFTTVIHGFCQN----DELDAALSVLDDMYLINKHADVFTYTTLVD 637
Query: 177 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
L K G+ +A L +ML P T+ +++ +GK + +A K +
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGIDPT-----PVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+ + YN +I + C G L EA+TL ++ + D T +A + +
Sbjct: 693 RQKCRTI------YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY-LKK 745
Query: 297 GPPTTA 302
G P +A
Sbjct: 746 GVPLSA 751
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 40/313 (12%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RA R +A+ IVPN+V+YN +I +CD RV+ A+EL + + P
Sbjct: 289 RANRLEKALRFLERMQV-VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCL-PD 346
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHG--ADSLVYNNLISGFLELGNLDKANEL 120
V+Y + RIVE DL+++M K HG D + YN LI + + D+A
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKM-AKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT---------C 171
+ +E+ D + + + GR EA D ++ + V C
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 172 NV--------LLEVLLKHGKKTQA---WALFDQM-----------LDNHTPPNFQAVNSD 209
+ LL+V+ HG K AL + M + N + ++ + NS
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525
Query: 210 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 269
T++++++ GK EA R+ K F N ++ C +G EA
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVL----KGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 270 FEELCSKSLSPDV 282
EE +K + +V
Sbjct: 582 MEECLNKGCAINV 594
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 73 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
+ AG++ +AL +L M G + L+ N I F+ L+KA + ++ +V +
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311
Query: 133 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 192
V + + + R +EA++ + + + V+ ++ L K + + L
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 252
+M H Q T+N +++ EAL + A K F +D GY+
Sbjct: 372 KMAKEHGLVPDQV----TYNTLIHMLTKHDHADEALWFLKDA----QEKGFRIDKLGYSA 423
Query: 253 IISRFCENGLLSEAETLFEELCSKS-LSPDVPTHFACVSA 291
I+ C+ G +SEA+ L E+ SK PDV T+ A V+
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 463
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+V++ VI+ C +D AL + + TY L GRI EA +L
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA-DVFTYTTLVDTLGKKGRIAEATEL 651
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL--KERC-LVYDGVVNATYMEW 142
+++ML+KG + Y +I + ++G +D + +++ +++C +Y+ V+ E
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVI-----EK 706
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G+ +EA ++ + TC L+E LK G A+ + +M + + P+
Sbjct: 707 LCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEA 227
+ + +++ GK EA
Sbjct: 767 VKMCEKLSKRLVLK-----GKVDEA 786
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 18/278 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+YN +I C ++ A E+++ + + + P VTY + G+ AG++ EA
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL +ML G ++ +N L+ G+ + G + A E+ ++ D V + ++ +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ + ++ + R T ++L+ L + +A L Q+ P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP--- 415
Query: 205 AVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+N +++ GK +EA + K K + F + + G+ C G
Sbjct: 416 --QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH-------CMKG 466
Query: 262 LLSEAETLFEELCSKSLSPD---VPTHFACVSAAGGSR 296
+ EA ++F ++ + SPD V + +C+ AG ++
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++ N+A +F + S P++V+Y ++I+ +C G++ A L ++ + P+
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY-PT 311
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L G+ AG ++ A ++ +M++ G D + + +LI G+ +G + + L++
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ R + + + + N R +A + L + P N +++ K G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM-VNECFNLGKFHEALATFRK 233
K +A + ++M P + TF I+ + C G+ EA++ F K
Sbjct: 432 KVNEANVIVEEMEKKKCKP-----DKITFTILIIGHCMK-GRMFEAVSIFHK 477
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
N+++NT RV+ A++L+ + + T+ L +G G+ +AL+LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMS 233
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM-EWFFNNGRD 149
G D + YN LI GF + L+KA+E+F ++K + VV T M + G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 150 KEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN--- 202
+EA SL+D ++ T VT NVL++ K G+ A + +M+ P+
Sbjct: 294 REA----SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 203 FQAV---------------------------NSDTFNIMVNECFNLGKFHEALATFRKAG 235
F ++ N+ T++I++N N + +A R+
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA----RELL 405
Query: 236 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+ SK YN +I FC+ G ++EA + EE+ K PD
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V++ ++I+ +C G+V L+ + A F P+A TY L + R+++A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILINALCNENRLLKARE 403
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL ++ +K +YN +I GF + G +++AN + +E++++ D + +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
GR EA+ + ++ +T + LL LLK G +A+ L +Q+ N
Sbjct: 464 MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Query: 205 AVNSDTFNIMVNEC 218
+ + T N + C
Sbjct: 523 PLETKTANATLAAC 536
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 18/278 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+YN +I C ++ A E+++ + + + P VTY + G+ AG++ EA
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL +ML G ++ +N L+ G+ + G + A E+ ++ D V + ++ +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ + ++ + R T ++L+ L + +A L Q+ P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP--- 415
Query: 205 AVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+N +++ GK +EA + K K + F + + G+ C G
Sbjct: 416 --QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH-------CMKG 466
Query: 262 LLSEAETLFEELCSKSLSPD---VPTHFACVSAAGGSR 296
+ EA ++F ++ + SPD V + +C+ AG ++
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++ N+A +F + S P++V+Y ++I+ +C G++ A L ++ + P+
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY-PT 311
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L G+ AG ++ A ++ +M++ G D + + +LI G+ +G + + L++
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ R + + + + N R +A + L + P N +++ K G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM-VNECFNLGKFHEALATFRK 233
K +A + ++M P + TF I+ + C G+ EA++ F K
Sbjct: 432 KVNEANVIVEEMEKKKCKP-----DKITFTILIIGHCMK-GRMFEAVSIFHK 477
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
N+++NT RV+ A++L+ + + T+ L +G G+ +AL+LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMS 233
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM-EWFFNNGRD 149
G D + YN LI GF + L+KA+E+F ++K + VV T M + G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 150 KEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN--- 202
+EA SL+D ++ T VT NVL++ K G+ A + +M+ P+
Sbjct: 294 REA----SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 203 FQAV---------------------------NSDTFNIMVNECFNLGKFHEALATFRKAG 235
F ++ N+ T++I++N N + +A R+
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA----RELL 405
Query: 236 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+ SK YN +I FC+ G ++EA + EE+ K PD
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V++ ++I+ +C G+V L+ + A F P+A TY L + R+++A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILINALCNENRLLKARE 403
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL ++ +K +YN +I GF + G +++AN + +E++++ D + +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
GR EA+ + ++ +T + LL LLK G +A+ L +Q+ N
Sbjct: 464 MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Query: 205 AVNSDTFNIMVNEC 218
+ + T N + C
Sbjct: 523 PLETKTANATLAAC 536
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL-D 84
++ SY +IN + GR + +LEL + PS +TY + G E L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM ++G D + YN L+S G D+A +F + + +V D + +E F
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
R ++ D + + NVLLE K G +A +F QM P
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP--- 350
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
N++T+++++N G++ + F + + SN+ D A YN +I F E G
Sbjct: 351 --NANTYSVLLNLFGQSGRYDDVRQLFLEMKS-SNTDP---DAATYNILIEVFGEGGYFK 404
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAG 293
E TLF ++ +++ PD+ T+ + A G
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACG 433
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 10/262 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+IV+YN +++ G D A ++R + P TY HL + F R+ +
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFR-TMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
DLL EM + G D YN L+ + + G++ +A +F +++ + + +
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F +GR + + + T N+L+EV + G + LF M++ + P+
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ T+ ++ C G HE RK + Y +I F + L
Sbjct: 422 ME-----TYEGIIFAC-GKGGLHE---DARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 263 LSEAETLFEELCSKSLSPDVPT 284
EA F + +P + T
Sbjct: 473 YEEALVAFNTMHEVGSNPSIET 494
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 11/274 (4%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA+ +FH + PN +Y+ ++N GR D +L+ + ++ P A TY
Sbjct: 335 EAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNI 392
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L + F G E + L +M+ + D Y +I + G + A ++ +
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
+V +E F +EA+ ++ ++ + + T + LL + G ++
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
A+ +++D+ P N DTFN + GKF EA+ T+ KS D
Sbjct: 513 AILSRLVDSGIPR-----NRDTFNAQIEAYKQGGKFEEAVKTYVDM-EKSRCDP---DER 563
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
++S + L+ E FEE+ + + P +
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSI 597
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+ YN +I+ HC G + A+ L + + P TY L G ++ EA
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L ++M N+ S YN+LI G+ + N+++A +L E+ + + + +T ++ +
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
N K AM Y + + VT L++ K +A L+ ML+ P
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP--- 512
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
N TF +V+ + G+ A+ ++ ++N + + G+ +I C+NG +
Sbjct: 513 --NDHTFACLVDGFWKEGRLSVAIDFYQ----ENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 265 EAETLFEELCSKSLSPDVPTHFA 287
A F ++ S ++PD+ ++ +
Sbjct: 567 RASRFFSDMRSCGITPDICSYVS 589
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 12/304 (3%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R + EA +F + ++PN+ +Y+ +I+ +C G V A LY+ I+ A P+
Sbjct: 246 RDNKMEEAEKMFELM-KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL-VAELLPN 303
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V + L GF A +V A L M+ G + VYN LI G + GN+ +A L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E++ L D + + EA ++ + + + + T N L+ K
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
QA L +M + PN TF+ +++ N+ A+ + + K
Sbjct: 424 NMEQALDLCSEMTASGVEPNII-----TFSTLIDGYCNVRDIKAAMGLYFEMTI----KG 474
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTA 302
DV Y +I + + EA L+ ++ + P+ T FAC+ G + A
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT-FACLVDGFWKEGRLSVA 533
Query: 303 TSKY 306
Y
Sbjct: 534 IDFY 537
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 49/344 (14%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++RA + +A+ +++ +S + P+ + ++ C +VD+A E+ I +A
Sbjct: 159 LFRAGKVTDAVEIWNAMI-RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVK 217
Query: 61 PSAVTYRHLTKGFISAGRI--VEALD---------------------------------L 85
S V Y L GF AGRI EAL +
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKA-NELFDELKERCLVYDGVVNATYMEWFF 144
+ EM+ G D+ YN L+ + + DK N + E++ R D V +T +E F
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFC 336
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
++A ++ + + M VT L++ L+ G + A L DQM + P
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP--- 393
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ + +++ G +A F D YN++IS C +G ++
Sbjct: 394 --DRIFYTTILDHLCKSGNVDKAYGVF----NDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKYWN 308
EA LFE++ K PD T + G RG +A K W+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFII--GGLIRGKKLSAAYKVWD 489
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++VSY+ +I T C A L+ + + VTY L K F+ G A L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKL 382
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
L +M G D + Y ++ + GN+DKA +F+++ E + D + + +
Sbjct: 383 LDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR 442
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+GR EA+ ++ + ++ +T ++ L++ K + A+ ++DQM+D
Sbjct: 443 SGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
T+ + P+ + Y +++ C G VD A ++ +I P A++Y L G +G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI-EHEITPDAISYNSLISGLCRSG 444
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
R+ EA+ L +M K D L + +I G + L A +++D++ ++ D V+
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 138 TYME 141
T ++
Sbjct: 505 TLIK 508
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
+ AI +F + +P+ +Y +++ C E R+D A+ L + + PS V Y
Sbjct: 204 DRAIEVFRGM-PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSPSPVIYN 261
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L G G + L+ M KG + + YN LI G G LDKA L + +
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
+ + V T + R +A+ S+ +R + + +VL+ L K GK +A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF-RKAGTKSNSKAFAMD 246
+L+ +M + PN ++++V+ GK +EA R + A+
Sbjct: 382 MSLWRKMAEKGCKPNIV-----VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT-- 434
Query: 247 VAGYNNIISRFCENGLLSEAETLFEEL 273
Y++++ F + GL EA +++E+
Sbjct: 435 ---YSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA------- 76
VPN V+YN +I+ C +G++D A+ L ++++ P+ VTY L G +
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAV 347
Query: 77 ----------------------------GRIVEALDLLREMLNKGHGADSLVYNNLISGF 108
G+ EA+ L R+M KG + +VY+ L+ G
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 109 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 168
G ++A E+ + + + + ++ M+ FF G +EA+ +K +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 169 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 228
+VL++ L G+ +A ++ +ML P+ A +S ++ +G AL
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS-----IIKGLCGIGSMDAAL 522
Query: 229 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+ + + K+ DV YN ++ C +S A L + + PDV T
Sbjct: 523 KLYHEMLCQEEPKSQP-DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+++ + EA++L+ + PNIV Y+ +++ C EG+ + A E+ +IA+
Sbjct: 372 LFKEGKAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL- 429
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+A TY L KGF G EA+ + +EM G + Y+ LI G +G + +A +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTP--VTCNVLLEV 177
+ ++ + D V ++ ++ G A+ Y ++ + K P VT N+LL+
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNS--DTFNIMVNECFNLGKFHEALAT 230
L ++A L + MLD P+ N+ +T + N C F E L
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 55/320 (17%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT------APFG- 60
++A+ LFH + ++ S+N+V+N +EG LE Y +++ + +P G
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 61 -------------------------------PSAVTYRHLTKGFISAGRIVEALDLLREM 89
P TY L G RI EA+ LL EM
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
++G ++YN LI G + G+L + +L D + + V + V T + G+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK- 307
Query: 150 KEAMDSYKSLMDRQF--KMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+D SL++R K P VT L+ L+K + T A L M +
Sbjct: 308 ---LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG-----YH 359
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
+N ++++++ F GK EA++ +RK K ++ Y+ ++ C G +E
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP----NIVVYSVLVDGLCREGKPNE 415
Query: 266 AETLFEELCSKSLSPDVPTH 285
A+ + + + P+ T+
Sbjct: 416 AKEILNRMIASGCLPNAYTY 435
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT--APFGPSA 63
R EA+ ++ T I P+ V+Y+++I C G +D AL+LY ++ P
Sbjct: 482 RVKEAMMVWSKMLT-IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN-LDKANELFD 122
VTY L G I A+DLL ML++G D + N ++ E N DK +
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Query: 123 ELKERCLVYDGVVNA 137
EL R L V A
Sbjct: 601 ELVVRLLKRQRVSGA 615
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 16/270 (5%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
I PN+V+Y +I C +GR+ A +Y I+ PS VTY L GF G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG-MEPSIVTYSSLIDGFCKCGNLR 443
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
L +M+ G+ D ++Y L+ G + G + A ++ + + + VV + +
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFK------MTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
+ + R EA+ ++ + K T + +++ + KH K T LFD M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 195 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 254
N + N ++++ F + +A F D+ YN +I
Sbjct: 564 QRNKISADIAVCN-----VVIHLLFKCHRIEDASKFFNNL----IEGKMEPDIVTYNTMI 614
Query: 255 SRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+C L EAE +FE L P+ T
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 38/302 (12%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FH + IVS N V+ + +++VA L ++ P P+ VT+ L GF
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGP-APNVVTFCTLINGF 296
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G + A DL + M +G D + Y+ LI G+ + G L ++LF + + + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
VV ++ ++ + +G A YK ++ + VT +L++ L + G+ +A+ ++ Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR--------------------- 232
+L P+ T++ +++ G A +
Sbjct: 417 ILKRGMEPSIV-----TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 233 -KAGTKSNSKAFAMDVAG---------YNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
K G ++ F++ + G +N++I +C EA +F + + PDV
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 283 PT 284
T
Sbjct: 532 AT 533
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 68/328 (20%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN+V++ +IN C G +D A +L++ ++ P + Y L G+ AG +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L + L+KG D +V+++ I +++ G+L A+ ++ + + + + V ++
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF- 203
+GR EA Y ++ R + + VT + L++ K G +AL++ M+ PP+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 204 ---------------------------QAV--NSDTFNIMVNECFNLGKFHEALATFRKA 234
Q++ N FN +++ L +F EAL FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 235 GT---KSNSKAF----------------------------------AMDVAGYNNIISRF 257
G K + F + D+A N +I
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTH 285
+ + +A F L + PD+ T+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+++ R +A F+ + + P+IV+YN +I +C R+D A ++ ++ PFG
Sbjct: 582 LFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFG 639
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ VT L + A+ + M KG +++ Y L+ F + +++ + +L
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F+E++E+ + V + ++ GR EA + + +D + V +L+ K
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 181 HGKKTQAWALFDQMLDNHTPPN 202
G+ +A L++ ML N P+
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPD 781
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 117/287 (40%), Gaps = 21/287 (7%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVI------NTHCDEGRVDVALELYRHIIAT 56
R R++EA+ +F I P++ ++ V+ + C + + L+L+ +
Sbjct: 508 RLNRFDEALKVFRLMGIY-GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN 566
Query: 57 APFGPSAV--TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 114
AV HL RI +A ++ D + YN +I G+ L L
Sbjct: 567 KISADIAVCNVVIHL---LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 115 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 174
D+A +F+ LK + V + N A+ + + ++ K VT L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 175 LEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 234
++ K ++ LF++M + P+ +++I+++ G+ EA F +A
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIV-----SYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
++K DV Y +I +C+ G L EA L+E + + PD
Sbjct: 739 ---IDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I P+IVSY+ +I+ C GRVD A ++ I A P V Y L +G+ GR+
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRL 763
Query: 80 VEALDLLREMLNKGHGADSLVYNNL 104
VEA L ML G D L+ L
Sbjct: 764 VEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 47/269 (17%)
Query: 18 FTQSNIVPNIVSYNN-VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
+ I P+ VS + V++ +G V AL+ +R ++ F V+ + KG +S
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKG-LSV 264
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
+I A LL +L+ G + + + LI+GF + G +D+A +LF +++R + D +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+T ++ +F G + + + K+ V + ++V +K G A ++ +ML
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
PN V Y +I
Sbjct: 385 QGISPN--------------------------------------------VVTYTILIKG 400
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTH 285
C++G + EA ++ ++ + + P + T+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 53/269 (19%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA--PFGPSAVTYRHLTKGFIS 75
++ P++V++ ++N C EGRV AL L ++ P+G + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT-------IINGLCK 53
Query: 76 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 135
G AL+LL +M A ++YN +I + G+ A LF E+ ++ + D +
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 136 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
+ ++ F +GR +A + +++RQ VT + L+ L+K GK ++A ++ ML
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 255
P YN++I
Sbjct: 174 RRGIFPT--------------------------------------------TITYNSMID 189
Query: 256 RFCENGLLSEAETLFEELCSKSLSPDVPT 284
FC+ L++A+ + + + SKS SPDV T
Sbjct: 190 GFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P++++Y+ +I++ C GR A +L R +I P VT+ L + G++ EA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER-QINPDVVTFSALINALVKEGKVSEA 165
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
++ +ML +G ++ YN++I GF + L+ A + D + + D V +T +
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ R M+ + + R VT L+ + G A L + M+ + PN
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 203 F 203
+
Sbjct: 286 Y 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R+ R+ +A L + I P++V+++ +IN EG+V A E+Y ++ F P+
Sbjct: 123 RSGRWTDAEQLLRDMI-ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF-PT 180
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY + GF R+ +A +L M +K D + ++ LI+G+ + +D E+F
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ R +V + V T + F G A D ++ +T +L L
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 183 KKTQAWALFDQM 194
+ +A+A+ + +
Sbjct: 301 ELRKAFAILEDL 312
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY-----RHIIATA 57
+ R N+A + ++S P++V+++ +IN +C RVD +E++ R I+A
Sbjct: 193 KQDRLNDAKRMLDSMASKS-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA-- 249
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
+ VTY L GF G + A DLL M++ G + + + ++++ L KA
Sbjct: 250 ----NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 118 NELFDELKE 126
+ ++L++
Sbjct: 306 FAILEDLQK 314
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 134/308 (43%), Gaps = 20/308 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ K + A A+F + + P+++ YNN+I+ C G +D A++ + + P+
Sbjct: 531 KLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE-MQKLRHRPT 588
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ + G+ +G + +L++ M G +N LI+G +E ++KA E+ D
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ + + M+ + + G +A + + L + + T LL+ K G
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSN 239
+ A A+ +M + P NS +NI+++ G EA + +K G K
Sbjct: 709 RMQSALAVTKEMSARNIPR-----NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP- 762
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGP- 298
D+ Y + IS + G ++ A EE+ + + P++ T+ + G +R
Sbjct: 763 ------DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK--GWARASL 814
Query: 299 PTTATSKY 306
P A S Y
Sbjct: 815 PEKALSCY 822
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 43/308 (13%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ P +V+Y +IN + G++ ALE+ R ++ + TY + GF+
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSR-VMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
A + +M+ +G D ++YNN+IS F +GN+D+A + E+++ +
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK---LRHRPTTR 590
Query: 138 TYMEWFFNNGRDKEAMDSYKSL-MDRQFKMTPV--TCNVLLEVLLKHGKKTQAWALFDQM 194
T+M + + S + M R+ P T N L+ L++ + +A + D+M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 195 L------DNHTPPNF----------------------QAVNSD--TFNIMVNECFNLGKF 224
+ HT + ++ D T+ ++ C G+
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 225 HEALATFRKAGTKSNSK-AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 283
ALA ++ ++ + +F YN +I + G + EA L +++ + + PD+
Sbjct: 711 QSALAVTKEMSARNIPRNSFV-----YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 284 THFACVSA 291
T+ + +SA
Sbjct: 766 TYTSFISA 773
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R + +EA+ LF+ T+ + N+V YN ++ VD A++++ ++ T
Sbjct: 280 MGRIGKCDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG-CR 337
Query: 61 PSAVTYRHLTKGFISAGRIVE---ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
P+ TY L ++ G++V +++ + + +G +Y+ L+ +LG++ +A
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKLGHVSEA 391
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
+ LF ++ + + + +E G+ EA++ + ++ + N +
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
L K + + LF++M + P+ T+NI++ +G+ EA+ F + +
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIF-----TYNILIASFGRVGEVDEAINIFEEL-ER 505
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
S+ K D+ YN++I+ +NG + EA F+E+ K L+PDV T+ + G +
Sbjct: 506 SDCKP---DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ +V + + YN V + ++ +L+ + P P TY L F G +
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP-SPDIFTYNILIASFGRVGEV 493
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA+++ E+ D + YN+LI+ + G++D+A+ F E++E+ L D V +T
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
ME F R + A ++ ++ + + VT N+LL+ L K+G+ +A L+ +M
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 200 PPN 202
P+
Sbjct: 614 TPD 616
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 136/315 (43%), Gaps = 43/315 (13%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEG---RVDVALEL---------Y 50
+ K ++AI +F ++ PN +Y+ ++N EG R+D +E+ Y
Sbjct: 317 KGKMVDKAIQVFSRM-VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIY 375
Query: 51 RHIIATA-------------------PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
+++ T P +Y + + AG+ +EA+++L ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 151
KG D+++YN + S +L + ++LF+++K+ D + F G E
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 152 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 211
A++ ++ L K ++ N L+ L K+G +A F +M + P+ T+
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV-----TY 550
Query: 212 NIMVNECF-NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 270
+ ++ ECF + A + F + K ++ YN ++ +NG +EA L+
Sbjct: 551 STLM-ECFGKTERVEMAYSLFEEMLVKGCQP----NIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 271 EELCSKSLSPDVPTH 285
++ + L+PD T+
Sbjct: 606 SKMKQQGLTPDSITY 620
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 120/278 (43%), Gaps = 19/278 (6%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+SN+ NI + N +I + + + L L + ++ TY+ L + ++ +
Sbjct: 162 MVKSNVHGNISTVNILIGFFGNTEDLQMCLRL----VKKWDLKMNSFTYKCLLQAYLRSR 217
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+A D+ E+ GH D YN L+ L +KA ++F+++K+R D
Sbjct: 218 DYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAKDEKACQVFEDMKKRHCRRDEYTYT 274
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ G+ EA+ + ++ + V N L++VL K +A +F +M++
Sbjct: 275 IMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
P N T+++++N G+ R G SK + M Y+ ++
Sbjct: 335 GCRP-----NEYTYSLLLNLLVAEGQL------VRLDGVVEISKRY-MTQGIYSYLVRTL 382
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
+ G +SEA LF ++ S + + ++ + + + G+
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+I +YN +I + G VD A+ ++ + + P ++Y L G + EA
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEEL-ERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+EM KG D + Y+ L+ F + ++ A LF+E+ + + V ++
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL-LKHGK 183
NGR EA+D Y + + +T VL + + HGK
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGK 633
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 42/286 (14%)
Query: 29 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 88
S+N ++ C+ V A ++ PF + +Y + G+ G + E +L+E
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPF--DSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG-VVNATYMEWFFNNG 147
M+ G G D L Y++LI G G ++ + E+FD +K + V D V NA M F +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNA--MICNFISA 338
Query: 148 RD-KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
RD E+M Y+ ++D + + T + L+ L+K K + A +F++ML P V
Sbjct: 339 RDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLV 398
Query: 207 NSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAM------------------ 245
S + + G H A+ + RKAG + + A+ +
Sbjct: 399 TS-----FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVW 453
Query: 246 ----------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
DV Y I+ C G L A + EE K P+
Sbjct: 454 DEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+S P+ +SY+++I GR++ ++E++ +I P A Y + FISA
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV-PDANVYNAMICNFISAR 339
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
E++ R ML++ + Y+ L+SG ++ + A E+F+E+ R ++ +
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++++ + G AM Y+ +++ +LL+ L + GK ++D+M ++
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
P + + + +V+ +G A+ +A K
Sbjct: 460 GYPSDVE-----VYEYIVDGLCIIGHLENAVLVMEEAMRK 494
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 46/319 (14%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+A F Q I PN+V YNN++ HC +D+A ++ ++ P+ TY
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSI 524
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KER 127
L GF A D++ +M A+ ++YN +I+G ++G KA E+ L KE+
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 128 -----CLVYDGVVNA------------TYMEW------------------FFNNGRDKEA 152
C Y+ +++ TY E F + R A
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
++ + + K+ L++ K A+ LF ++ + PN NS
Sbjct: 645 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS---- 700
Query: 213 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
+++ NLGK A+ ++K + + D+ Y +I ++G ++ A L+ E
Sbjct: 701 -LISGFRNLGKMDAAIDLYKKMV----NDGISCDLFTYTTMIDGLLKDGNINLASDLYSE 755
Query: 273 LCSKSLSPDVPTHFACVSA 291
L + PD H V+
Sbjct: 756 LLDLGIVPDEILHMVLVNG 774
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 19/283 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R ++ EA+ +F ++ P+ + ++ + C + +AL+L R + S
Sbjct: 251 RERKPEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPAS 309
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY + F+ G + EA+ ++ EM+ G + +L++G+ + L KA +LF+
Sbjct: 310 QETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++E L D V+ + +EWF N ++A++ Y + + + V + +++ LK
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL----GKFHEALATFRKAGTKS 238
A +F+ ++ F M N+ F L GK +A +F K +
Sbjct: 430 SPEAALEIFNDSFESWIAHGF----------MCNKIFLLFCKQGKV-DAATSFLKMMEQ- 477
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
K +V YNN++ C + A ++F E+ K L P+
Sbjct: 478 --KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
SN N V YN +IN C G+ A E+ +++I + S +Y + GF+ G
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE--------------------- 119
A++ REM G + + + +LI+GF + +D A E
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 120 --------------LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 165
LF EL E L+ + V + + F N G+ A+D YK +++
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Query: 166 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 225
T +++ LLK G A L+ ++LD P + ++VN G+F
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP-----DEILHMVLVNGLSKKGQFL 782
Query: 226 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+A K + K +V Y+ +I+ G L+EA L +E+ K + D
Sbjct: 783 KA----SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Query: 286 FACVSAAGGSRGPPTTA 302
VS G PP +
Sbjct: 839 NLLVS--GRVEKPPAAS 853
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 132/323 (40%), Gaps = 44/323 (13%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ +A+ LF+ + + P+ V ++ ++ C ++ A+E Y + + PS
Sbjct: 357 KGNELGKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM-KSVRIAPS 414
Query: 63 AVTYRHLTKG----------------------------------FISAGRIVEALDLLRE 88
+V + +G F G++ A L+
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
M KG + + YNN++ + N+D A +F E+ E+ L + + ++ FF N
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
++ A D + F+ V N ++ L K G+ ++A +ML N +++
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA----KEMLQNLIKEKRYSMSC 590
Query: 209 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 268
++N +++ +G A+ T+R+ S +V + ++I+ FC++ + A
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSP----NVVTFTSLINGFCKSNRMDLALE 646
Query: 269 LFEELCSKSLSPDVPTHFACVSA 291
+ E+ S L D+P + A +
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDG 669
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I PN+++YN +I++ C GR A +L RH+I P VT+ L F+ ++
Sbjct: 38 EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE-KQINPDIVTFSALINAFVKERKV 96
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA ++ +EML ++ YN++I GF + +D A + D + + D V +T
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + R M+ + + R VT L+ + G A L ++M+
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 200 PPNF 203
P++
Sbjct: 217 APDY 220
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+++A L + I P+IV+++ +IN E +V A E+Y+ ++ + F P+ +T
Sbjct: 60 RWSDADQLLRHMI-EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF-PTTIT 117
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + GF R+ +A +L M +KG D + ++ LI+G+ + +D E+F E+
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
R +V + V T + F G A D ++ +T + +L L +
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 186 QAWALFDQM 194
+A+A+ + +
Sbjct: 238 KAFAILEDL 246
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 10/220 (4%)
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
G + A +L EM KG + L YN +I F G A++L + E+ + D V
Sbjct: 24 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 83
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+ + F + EA + YK ++ T +T N +++ K + A + D M
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
P+ TF+ ++N + + F + + + + Y +I
Sbjct: 144 KGCSPDVV-----TFSTLINGYCKAKRVDNGMEIF----CEMHRRGIVANTVTYTTLIHG 194
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
FC+ G L A+ L E+ S ++PD T F C+ A S+
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYIT-FHCMLAGLCSK 233
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELY-----RHIIATAPFGPSAVTYRHLTKGFISAGRI 79
P++V+++ +IN +C RVD +E++ R I+A + VTY L GF G +
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA------NTVTYTTLIHGFCQVGDL 201
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
A DLL EM++ G D + ++ +++G L KA + ++L++
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 113/272 (41%), Gaps = 15/272 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P +VSYN VI + + + + PS TY L G+ R+ +AL
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM KG Y +LI+ + + ANELF ELKE V A ++ F
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ EA+D + + ++ N L+ ++K G +A +L +M +N +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI- 549
Query: 205 AVNSDTFNIMVNECFNLG---KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
++ NI++N G + E T + +G K D YN ++ F G
Sbjct: 550 ----NSHNIILNGFARTGVPRRAIEMFETIKHSGIKP-------DGVTYNTLLGCFAHAG 598
Query: 262 LLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ EA + E+ K D T+ + + A G
Sbjct: 599 MFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHG-ADSLVYNNLISGFLELGNLDKANE 119
P++ TY + + G+ + ++ EM N+G D++ Y+ LIS + +LG D A
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
LFDE+K+ C+ + T + +F G+ ++A+D ++ + T T L++ L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
K G+ +A+ + ML + P+ +N+ ++N +G+ E F + G
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNN-----LMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 240 SKAFAMDVAGYNNIISRFCENGL-LSEAETLFEELCSKSLSP 280
+ V YN +I E+ +SE + F+++ + S+SP
Sbjct: 370 TPT----VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 15/297 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK ++A+++F + P +YN+VI EG+ + E+Y + P
Sbjct: 174 RAKMVSKALSVF-YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPD 232
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+TY L + GR A+ L EM + +Y L+ + ++G ++KA +LF+
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+K ++ GR EA YK ++ V N L+ +L K G
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH--EALATFRKAGTKSNS 240
+ + +F +M P ++N ++ F K H E + F K S S
Sbjct: 353 RVEELTNVFSEMGMWRCTPTVV-----SYNTVIKALFE-SKAHVSEVSSWFDKMKADSVS 406
Query: 241 KA-FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+ F Y+ +I +C+ + +A L EE+ K P + + ++A G ++
Sbjct: 407 PSEFT-----YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+AKRY A LF V + V Y +I G++ A++L+ + GP
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGS-GPD 513
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
Y L G + AG I EA LLR+M G AD +N +++GF G +A E+F+
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
+K + DGV T + F + G +EA + + D+ F+ +T + +L+ +
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 43/296 (14%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHI--IATAP------------------------ 58
PN+V YN +I++ C++G+V+ AL++ +H+ + P
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 59 --------FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 110
P +T+ L + G+++EA EM+ + + + YN+LI+G
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 111 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 170
G LD+A ++ + L + + V T + + R + M + T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
N L + + GK + A + +M+ P+ TFNI+++ + GK +AL
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY-----TFNILLDGLCDHGKIGKALVR 416
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHF 286
KS + + + YN II C+ + +A LF L K +SPDV T+
Sbjct: 417 LEDL-QKSKT---VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 127/308 (41%), Gaps = 28/308 (9%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ +Y I+LF I ++ S+ +I+ C R+ +AL ++ F PS
Sbjct: 91 KLNKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG-FEPS 148
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VT+ L GF R EA+ L+ +++ G+ + ++YN +I E G ++ A ++
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+K+ + D V + + F++G + +M +T + L++V K G
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNS---------------DTFNIMVNECF--NLGKFH 225
+ +A +++M+ PN NS N++V++ F N ++
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 226 EALATFRKAGTKSNSKAFAM---------DVAGYNNIISRFCENGLLSEAETLFEELCSK 276
+ + KA + D YN + +C+ G S AE + + S
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 277 SLSPDVPT 284
+ PD+ T
Sbjct: 389 GVHPDMYT 396
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 16/277 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
++P+ V Y +I+ +C+ GR D A + + ++ + PS T L G I +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDA 462
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ R M +G D + YNNL+ G+ + L+K EL DE++ + D +
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G EA + L+ R F + + ++ K G +A+ L+ M D P+
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTKSNSKAFAMDVAGYNNIISRFCE 259
++ +++ + +A+ F K AG K DV YN +I +C
Sbjct: 583 VVTCSA-----LLHGYCKAQRMEKAIVLFNKLLDAGLKP-------DVVLYNTLIHGYCS 630
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
G + +A L + + + P+ TH A V G R
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 52/265 (19%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA--VTYRHLTKGFISAGRIV 80
I P+IV++ I+ C G + A + + FG S V+ + GF G+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSV---LFKLKLFGISQDSVSVSSVIDGFCKVGKPE 358
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
EA+ L+ + + VY++ +S G++ +A+ +F E+ E L+ D V T
Sbjct: 359 EAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT-- 413
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+D Y CN+ G+ +A+ F +L + P
Sbjct: 414 -----------MIDGY--------------CNL--------GRTDKAFQYFGALLKSGNP 440
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P+ T I++ C G +A + FR T + +DV YNN++ + +
Sbjct: 441 PSLT-----TSTILIGACSRFGSISDAESVFRNMKT----EGLKLDVVTYNNLMHGYGKT 491
Query: 261 GLLSEAETLFEELCSKSLSPDVPTH 285
L++ L +E+ S +SPDV T+
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATY 516
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 16/277 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
++P+ V Y +I+ +C+ GR D A + + ++ + PS T L G I +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDA 462
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ R M +G D + YNNL+ G+ + L+K EL DE++ + D +
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
G EA + L+ R F + + ++ K G +A+ L+ M D P+
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTKSNSKAFAMDVAGYNNIISRFCE 259
++ +++ + +A+ F K AG K DV YN +I +C
Sbjct: 583 VVTCSA-----LLHGYCKAQRMEKAIVLFNKLLDAGLKP-------DVVLYNTLIHGYCS 630
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
G + +A L + + + P+ TH A V G R
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 52/265 (19%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA--VTYRHLTKGFISAGRIV 80
I P+IV++ I+ C G + A + + FG S V+ + GF G+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSV---LFKLKLFGISQDSVSVSSVIDGFCKVGKPE 358
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
EA+ L+ + + VY++ +S G++ +A+ +F E+ E L+ D V T
Sbjct: 359 EAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT-- 413
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+D Y CN+ G+ +A+ F +L + P
Sbjct: 414 -----------MIDGY--------------CNL--------GRTDKAFQYFGALLKSGNP 440
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P+ T I++ C G +A + FR T + +DV YNN++ + +
Sbjct: 441 PSLT-----TSTILIGACSRFGSISDAESVFRNMKT----EGLKLDVVTYNNLMHGYGKT 491
Query: 261 GLLSEAETLFEELCSKSLSPDVPTH 285
L++ L +E+ S +SPDV T+
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATY 516
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 18/288 (6%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S + PNIV+YN+ I+ EGR+ A L+R I + VTY L G+ I
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDI 323
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EAL L M ++G + YN+++ E G + +AN L E+ + + D + T
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + A+ K +++ K+ + L+ K + A M++
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISR 256
P + T++ +V+ +N K E L F K G DVA Y +I R
Sbjct: 444 SPGYA-----TYSWLVDGFYNQNKQDEITKLLEEFEKRG-------LCADVALYRGLIRR 491
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATS 304
C+ + A+ LFE + K L D F ++ A G T A++
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGD-SVIFTTMAYAYWRTGKVTEASA 538
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ ++M+ G A+ VYN L+ + G+ +KA +L E++E+ + D T + +
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
EA+ S + M+R + P VT N + + G+ +A LF ++ D+ T
Sbjct: 250 KKSMHFEAL-SVQDRMERS-GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA-- 305
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
N T+ +++ + EAL + S+ F+ V YN+I+ + CE+G
Sbjct: 306 ----NHVTYTTLIDGYCRMNDIDEAL----RLREVMESRGFSPGVVTYNSILRKLCEDGR 357
Query: 263 LSEAETLFEELCSKSLSPD 281
+ EA L E+ K + PD
Sbjct: 358 IREANRLLTEMSGKKIEPD 376
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 11/263 (4%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+V NI YN +++ G + A +L + F P TY L + EA
Sbjct: 199 VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF-PDIFTYNTLISVYCKKSMHFEA 257
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L + M G + + YN+ I GF G + +A LF E+K+ + + V T ++
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDG 316
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ EA+ + + R F VT N +L L + G+ +A L +M P+
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
NI N N E + + K K +D+ Y +I FC+
Sbjct: 377 ---------NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 263 LSEAETLFEELCSKSLSPDVPTH 285
L A+ + K SP T+
Sbjct: 428 LENAKEELFSMIEKGFSPGYATY 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+S + ++ SY +I+ C ++ A E +I F P TY L GF + +
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG-FSPGYATYSWLVDGFYNQNKQ 463
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
E LL E +G AD +Y LI +L +D A LF+ ++++ LV D V+ T
Sbjct: 464 DEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTM 523
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQF 164
++ G+ EA + + +R+
Sbjct: 524 AYAYWRTGKVTEASALFDVMYNRRL 548
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 105/276 (38%), Gaps = 73/276 (26%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R EA LF + ++ N V+Y +I+ +C +D AL L R ++ + F P
Sbjct: 285 REGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPG 341
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY + + GRI EA LL EM K D++ N LI+ + ++ ++ A ++
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 123 ELKERCL-----VYDGVVN---------------------------ATY---MEWFFNNG 147
++ E L Y +++ ATY ++ F+N
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 148 RDKEA---------------MDSYKSLMDRQFKMTPVT-CNVLLEVLLKHG--------- 182
+ E + Y+ L+ R K+ V VL E + K G
Sbjct: 462 KQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFT 521
Query: 183 ----------KKTQAWALFDQMLDNHTPPNFQAVNS 208
K T+A ALFD M + N + S
Sbjct: 522 TMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKS 557
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 11 IAL-FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
IAL F+ + I PN + N V++ +C G++D +EL + + F + V+Y L
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTL 279
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 129
G G + AL L M G + + +N LI GF L +A+++F E+K +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 130 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 189
+ V T + + G + A Y+ ++ + +T N L+ L K K +A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 190 LFDQMLDNHTPPNFQAVNSDTFN-IMVNECF--NLGKFHEALATFRKAGTKSNSKAFAMD 246
++ + P NS TF+ +++ +C N + E + ++G N + F M
Sbjct: 400 FVKELDKENLVP-----NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM- 453
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT-HFAC 288
++S FC N A + E+ +S+ D T H C
Sbjct: 454 ------LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 11 IAL-FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 69
IAL F+ + I PN + N V++ +C G++D +EL + + F + V+Y L
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTL 279
Query: 70 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 129
G G + AL L M G + + +N LI GF L +A+++F E+K +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 130 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 189
+ V T + + G + A Y+ ++ + +T N L+ L K K +A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 190 LFDQMLDNHTPPNFQAVNSDTFN-IMVNECF--NLGKFHEALATFRKAGTKSNSKAFAMD 246
++ + P NS TF+ +++ +C N + E + ++G N + F M
Sbjct: 400 FVKELDKENLVP-----NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM- 453
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT-HFAC 288
++S FC N A + E+ +S+ D T H C
Sbjct: 454 ------LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 13/258 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ +YN +I+ G D AL+L+ ++ P+ VT+ L G R+ EAL
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKK-VKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 85 LLREMLNKGHGADSLV--YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
+ +ML K +G V Y +LI ++G L A +L DE E + D + +T +
Sbjct: 209 MKHDML-KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
GR E + + ++ K VT NVL+ A + D+M++ P+
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
++N+++ F + K+ EA F + S D Y + CE
Sbjct: 328 VI-----SYNMILGVFFRIKKWEEATYLFEDMPRRGCSP----DTLSYRIVFDGLCEGLQ 378
Query: 263 LSEAETLFEELCSKSLSP 280
EA + +E+ K P
Sbjct: 379 FEEAAVILDEMLFKGYKP 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ + R EA+ + H + P + Y ++I C G + A +L +
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL-KDEAYEGKIK 255
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
A Y L I AGR E +L EM KG D++ YN LI+GF + + AN +
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
DE+ E+ L D + + FF + +EA ++ + R ++ ++ + L +
Sbjct: 316 LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 181 HGKKTQAWALFDQML 195
+ +A + D+ML
Sbjct: 376 GLQFEEAAVILDEML 390
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+++A+ LF + + P V++ +I+ C + RV AL++ ++ P+ Y
Sbjct: 168 FDDALKLFDEM-VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIY 226
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L K G + A L E D+ +Y+ LIS ++ G ++ + + +E+ E
Sbjct: 227 ASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSE 286
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ D V + F + A ++++ K ++ N++L V + K +
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 187 AWALFDQMLDNHTPPN 202
A LF+ M P+
Sbjct: 347 ATYLFEDMPRRGCSPD 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
+K ++E + T + IVP + + NVIN GR + H+ P
Sbjct: 60 SKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFF---GRGKLPSRAL-HMFDEMPQYRCQ 115
Query: 64 VTYRHLTKGFISAGRIVEALDLLREML---NKGHGADSLVYNNLISGFLELGNLDKANEL 120
T + L + + E L+ ++E L ++ D+ YN LI G + G D A +L
Sbjct: 116 RTVKSLNSLLSALLKCGE-LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKL 174
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV---LLEV 177
FDE+ ++ + GV T + + R KEA+ K M + + + P T ++ L++
Sbjct: 175 FDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL-KMKHDMLKVYGVRP-TVHIYASLIKA 232
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
L + G+ + A+ L D+ + V++ ++ +++ G+ +E +
Sbjct: 233 LCQIGELSFAFKLKDEAYEGKI-----KVDAAIYSTLISSLIKAGRSNEVSMILEEM--- 284
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ K D YN +I+ FC A + +E+ K L PDV ++
Sbjct: 285 -SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 27/289 (9%)
Query: 10 AIALF-HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV--TY 66
AI++F + ++ P ++Y +V + G+ +L+ +I S + T
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
H+ +++ G ++EA + M+ G D + +N++I GF + G +D+A LFDE+ +
Sbjct: 168 LHM---YVTCGCLIEAWRIFLGMI----GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
R +GV + + F NGR K+A+D ++ + ++ K T LL G Q
Sbjct: 221 R----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 246
+ + ++ N F+ +NS +++ G E L F A K
Sbjct: 277 GRWIHEYIVRNR----FE-LNSIVVTALIDMYCKCGCIEEGLNVFECAPKK--------Q 323
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
++ +N++I NG A LF EL L PD + ++A S
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 110/249 (44%), Gaps = 19/249 (7%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++V++N++I G +D A L+ + + V++ + GF+ GR +ALD+
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR-----NGVSWNSMISGFVRNGRFKDALDM 245
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
REM K D +L++ LG ++ + + + + +V ++ +
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTC-NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G +E ++ ++ +Q ++C N ++ L +G + +A LF ++ + P
Sbjct: 306 CGCIEEGLNVFECAPKKQ-----LSCWNSMILGLANNGFEERAMDLFSELERSGLEP--- 357
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+S +F ++ C + G+ H A FR K + + Y +++ GLL
Sbjct: 358 --DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP---SIKHYTLMVNVLGGAGLLE 412
Query: 265 EAETLFEEL 273
EAE L + +
Sbjct: 413 EAEALIKNM 421
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 14/263 (5%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
+ V++ EG + A E + + + + P VTY L + F AG EAL +L+EM
Sbjct: 285 STVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 150
ADS+ YN L++ ++ G +A + + + ++ ++ + + T ++ + G++
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 151 EAMDSYKSLMDRQFKMTPVTC--NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
EA+ + S+ ++ P TC N +L +L K + + + M N P N
Sbjct: 404 EALKLFYSM--KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP-----NR 456
Query: 209 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 268
T+N M+ C N G FR+ S F D +N +IS + G +A
Sbjct: 457 ATWNTMLALCGNKGMDKFVNRVFREM----KSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 269 LFEELCSKSLSPDVPTHFACVSA 291
++ E+ + V T+ A ++A
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNA 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 127/315 (40%), Gaps = 40/315 (12%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RA EA + T+ ++PN ++Y VI+ + G+ D AL+L+ + + A P+
Sbjct: 363 RAGFSKEAAGVIEMM-TKKGVMPNAITYTTVIDAYGKAGKEDEALKLF-YSMKEAGCVPN 420
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY + R E + +L +M + G + +N +++ G N +F
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+K D T + + G + +A Y + F T N LL L + G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG-----------KFHEA---- 227
W + ++ + F+ + ++++M+ +C+ G + E
Sbjct: 541 D----WRSGENVISDMKSKGFKPTET-SYSLML-QCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 228 ---------LATFRKAGTKSNSKAFAM--------DVAGYNNIISRFCENGLLSEAETLF 270
LA F+ + +AF + D+ +N+++S F N + +AE +
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 654
Query: 271 EELCSKSLSPDVPTH 285
E + LSPD+ T+
Sbjct: 655 ESIREDGLSPDLVTY 669
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG-NLDKANELFDEL 124
Y + + G+ +A+DL M G + YN ++ F ++G + K + DE+
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ + L +D +T + G +EA + + L ++ VT N LL+V K G
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
T+A ++ +M +N P +S T+N +V G EA K
Sbjct: 333 TEALSVLKEMEENSCP-----ADSVTYNELVAAYVRAGFSKEAAGVIEMM----TKKGVM 383
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ Y +I + + G EA LF + P+ T+ A +S G
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 121/328 (36%), Gaps = 54/328 (16%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ R NE I + + PN ++N ++ ++G ++R + + F P
Sbjct: 433 KKSRSNEMIKML-CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPD 490
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
T+ L + G V+A + EM G A YN L++ G+ +
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 123 ELKER--------------CLVYDGVVNATYMEWFFNNGRDKEAMDSY---KSLMDRQFK 165
++K + C G N +E N ++ + S+ ++L+ FK
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGG--NYLGIERIENRIKEGQIFPSWMLLRTLLLANFK 608
Query: 166 MTP--------------------VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
V N +L + ++ QA + + + ++ P+
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 206 VNS--DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
NS D + + EC+ K E L T K+ K D+ YN +I FC GL+
Sbjct: 669 YNSLMDMY-VRRGECW---KAEEILKTLEKSQLKP-------DLVSYNTVIKGFCRRGLM 717
Query: 264 SEAETLFEELCSKSLSPDVPTHFACVSA 291
EA + E+ + + P + T+ VS
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
G+ D +++N+++S F D+A + + ++E L D V + M+ + G +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
+ K+L Q K V+ N +++ + G +A + +M + P T+N
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF-----TYN 740
Query: 213 IMVNECFNLGKFHE---ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
V+ +G F E + K + N F M V GY C G SEA
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY-------CRAGKYSEA 790
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 130/310 (41%), Gaps = 42/310 (13%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSA 63
R+ + +F FF + + VPN++ YN V+ G+ D EL I A G P+
Sbjct: 124 RWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWD---ELRLCWIEMAHNGVLPTN 180
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
TY L + AG + EAL ++ M + H D + ++ F G D+A+ F
Sbjct: 181 NTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-- 238
Query: 124 LKERC-----LVYDGV------------VNATY---MEWFFNNGRDK-EAMDSYKSLMD- 161
K C L D + VN ME F R+ E + S D
Sbjct: 239 -KGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDS 297
Query: 162 --RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 219
R+ ++T T N L+++ K G+ A LF +ML + P +++ TFN M++ C
Sbjct: 298 SPRKPRLTS-TFNTLIDLYGKAGRLNDAANLFSEMLKSGVP-----IDTVTFNTMIHTCG 351
Query: 220 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 279
G EA + +K K + D YN ++S + G + A + ++ L
Sbjct: 352 THGHLSEAESLLKKM----EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLF 407
Query: 280 PDVPTHFACV 289
PD TH A +
Sbjct: 408 PDTVTHRAVL 417
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 20/291 (6%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA +F+ S +++ YN +I + + AL L++ + + P TY
Sbjct: 497 EAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW-PDECTYNS 555
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L + + EA +L EML+ G Y +I+ ++ LG L A +L++ +++
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
+ + VV + + F +G +EA+ ++ + + + + L++ K G +A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAM 245
++D+M D+ P+ A NS M++ C +LG EA + F R+ GT
Sbjct: 676 RVYDKMKDSEGGPDVAASNS-----MLSLCADLGIVSEAESIFNALREKGT--------C 722
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH---FACVSAAG 293
DV + ++ + G+L EA + EE+ L D + AC +A G
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADG 773
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 123/274 (44%), Gaps = 18/274 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+AK + +A++LF Q P+ +YN++ VD A + ++ + P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTW-PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPG 584
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY + ++ G + +A+DL M G + +VY +LI+GF E G +++A + F
Sbjct: 585 CKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFR 644
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++E + + +V + ++ + G +EA Y + D + N +L + G
Sbjct: 645 MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLG 704
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT---FRKAGTKSN 239
++A ++F+ + + T + +F M+ +G EA+ R++G S
Sbjct: 705 IVSEAESIFNALREKGT------CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS- 757
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
D +N +++ + +G LSE LF E+
Sbjct: 758 ------DCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I P+ +YN +++ H D G ++ ALE YR I F P VT+R + +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLF-PDTVTHRAVLHILCQRKMV 426
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
E ++ EM D ++ ++ G + +A LF+ + C V A
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC-VLSSTTLAAV 485
Query: 140 MEWFFNNGRDKEAMDSY--KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
++ + G EA + K M Q + + NV+++ K +A +LF M +
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQ-RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
T P+ NS F ++ + + LA +G K K +A +A Y +
Sbjct: 545 GTWPDECTYNS-LFQMLAGVDL-VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL---- 598
Query: 258 CENGLLSEAETLFEELCSKSLSPD 281
GLLS+A L+E + + P+
Sbjct: 599 ---GLLSDAVDLYEAMEKTGVKPN 619
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 21/267 (7%)
Query: 25 PNIVS-YNNVINTHCDEGRVDVALELYRHIIATA-PFGPSAVTYRHLTKGFISAGRIVEA 82
P + S +N +I+ + GR++ A L+ ++ + P VT+ + + G + EA
Sbjct: 302 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPI--DTVTFNTMIHTCGTHGHLSEA 359
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
LL++M KG D+ YN L+S + G+++ A E + ++++ L D V + +
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 143 FFNNGRDKEAMDSYKSLMDR-QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
E +++ + MDR ++ + V++++ + G QA ALF++
Sbjct: 420 LCQRKMVAE-VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-------- 470
Query: 202 NFQ---AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 258
FQ ++S T +++ G + EA F K N DV YN +I +
Sbjct: 471 -FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFY---GKRNMSGQRNDVLEYNVMIKAYG 526
Query: 259 ENGLLSEAETLFEELCSKSLSPDVPTH 285
+ L +A +LF+ + ++ PD T+
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTY 553
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-IATAPF-GPSAVTY 66
EA+++F+ + + PN+VS+N +I+ C G + AL+L + + + F P+AVTY
Sbjct: 236 EALSVFYRML-KCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+ GF AGR+ A + +M+ G + Y L+ + G+ D+A L DE+
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ LV + V+ + + W F G + AM + + + ++ T +++ L ++G +
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 187 A 187
A
Sbjct: 415 A 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 128/335 (38%), Gaps = 64/335 (19%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN V+YN+VIN C GR+D+A E R + + + TY L + AG EA
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLA-ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 83 LDL-----------------------------------LREMLNKGHGADSLVYNNLISG 107
L L LR+M +K D ++ G
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRG 405
Query: 108 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 167
G + +A E ++ E+ LV D V + T M F + + A S++ + +
Sbjct: 406 LCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 168 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD------------------ 209
++ L++ LK GK +A ++D M+ + N NS
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN 525
Query: 210 --------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
T+N ++NE G EA K + K+ ++ +N +I+ C+ G
Sbjct: 526 AMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSL--VTFNIMINHLCKFG 583
Query: 262 LLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+A+ + + + + + PD T+ +++ R
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 24/263 (9%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
V+ C G V A+E R I + V + L F+ ++ A +L ML +
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQI-SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDEL-----KERCLVYDGVVNATYMEWFFNNG 147
G D++ + LI G+L+ G L++A E++D + ++Y+ +VN G
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN----------G 510
Query: 148 RDKEAM-DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
K M + +++++ VT N LL LK G +A + +M ++V
Sbjct: 511 LSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKM---QKQDGEKSV 567
Query: 207 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
+ TFNIM+N G + +A + + D Y +I+ F ++ +
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFM----VERGVVPDSITYGTLITSFSKHRSQEKV 623
Query: 267 ETLFEELCSKSLSPDVPTHFACV 289
L + L + ++P + + V
Sbjct: 624 VELHDYLILQGVTPHEHIYLSIV 646
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV Y N+++ + + G++ A +L R + F P+A Y L + R+ EA+
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG-FEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ EM AD + Y L+SGF + G +DK + D++ ++ L+ + TYM
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL---TYMHIMV 400
Query: 145 NNGRDKEAMDSYKSLMD--RQFKMTPVTC--NVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ + KE+ + LM+ RQ + P NV++ + K G+ +A L+++M +N
Sbjct: 401 AHEK-KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
P DTF IM+N + G EA F++ T+
Sbjct: 460 PGV-----DTFVIMINGLASQGCLLEASDHFKEMVTR 491
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 17/263 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ + +++ C G V A +L+ + P T L G+ G+++EA
Sbjct: 216 PDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFT--SLLYGWCRVGKMMEAKY 273
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L +M G D + Y NL+SG+ G + A +L +++ R + ++
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
R +EAM + + + + VT L+ K GK + + + D M+ P+
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS-- 391
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENG 261
+IMV HE +F + K + D+ YN +I C+ G
Sbjct: 392 --ELTYMHIMVA--------HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG 441
Query: 262 LLSEAETLFEELCSKSLSPDVPT 284
+ EA L+ E+ LSP V T
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDT 464
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
F NI + V YN + GRV+ A EL + + P + Y L G+ G
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQG 437
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
++V+ALDL+ EM+ G D + YN L+SG G+ ++ E+++ +K + V N+
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNS 497
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+E + KEA D + SL + P ++ + G +A+ F ++
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQK----CPENKASFVKGYCEAGLSKKAYKAFVRL--- 550
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEAL---ATFRKAGTKSN--------------- 239
P ++V F + E + L K H+ L + +R +S
Sbjct: 551 -EYPLRKSVYIKLFFSLCIEGY-LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 240 ----------SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ D+ Y +I +C L +AE+LFE++ + + PDV T+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTY 664
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 111/280 (39%), Gaps = 22/280 (7%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N V + ++ +C ALE ++ F V Y GR+ EA +L
Sbjct: 352 NCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIF-LDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
L+EM ++G D + Y LI G+ G + A +L DE+ + D + +
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
NG ++E ++ Y+ + K VT +V++E L K +A F L+ P N +
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS-LEQKCPENKAS 529
Query: 206 ---------VNSDTFNIMVNECFNLGK-------FHEALATFRKAGTKSNSKAFAMDV-- 247
++ + V + L K F + + + K A V
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Query: 248 --AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ +I FC+ + EA+ LF+ + + L PD+ T+
Sbjct: 590 GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 11/262 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV--TYRHLTKGFISAGRIVEAL 83
++ Y IN C G + A+ L +I + + +GF + ++ A
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
++ EM G G D +I + + NL +A D++ + L + V+ + ++ +
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
EA++ +K D + V NV + L K G+ +A+ L +M D P+
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD- 422
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
+N T ++ C GK +AL + S D+ YN ++S NG
Sbjct: 423 -VINYTT--LIDGYCLQ-GKVVDALDLIDEMIGNGMSP----DLITYNVLVSGLARNGHE 474
Query: 264 SEAETLFEELCSKSLSPDVPTH 285
E ++E + ++ P+ T+
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTN 496
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
EAL L +ML KG + ++ + ++ + ++ +A E F E ++ + D V
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ GR +EA + + + DR + L++ GK A L D+M+ N
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTKSNSKAFAMDVAGYNNIISRF 257
P+ T+N++V+ G E L + + G K N+ ++ II
Sbjct: 456 PDLI-----TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV-------IIEGL 503
Query: 258 CENGLLSEAETLFEELCSK 276
C + EAE F L K
Sbjct: 504 CFARKVKEAEDFFSSLEQK 522
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
K+++ I + + +S+ P+++ +N +I+ + + + A LY ++ + + P+
Sbjct: 155 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESR-YVPTED 213
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL---VYNNLISGFLEL-GNLDKANEL 120
TY L K + AG I A +L EM N ++ VYN I G ++ GN ++A ++
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 121 FDELK-ERCL----VYDGVVN------ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
F +K +RC Y+ ++N +YM W Y + Q K
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL-----------YCEMRSHQCKPNIC 322
Query: 170 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF----H 225
T L+ + G +A +F+Q+ ++ P+ N+ + E ++ +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA------LMESYSRAGYPYGAA 376
Query: 226 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
E + + G + D A YN ++ + GL S+AE +FEE+ ++P + +H
Sbjct: 377 EIFSLMQHMGCEP-------DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 286 FACVSAAGGSR 296
+SA +R
Sbjct: 430 MLLLSAYSKAR 440
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 11/291 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R EAI +F + P +YN +IN + + ++ +LY + +
Sbjct: 261 MKRKGNTEEAIDVFQRM-KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCK 318
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ TY L F G +A ++ ++ G D VYN L+ + G A E+
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F ++ D ++ + G +A ++ + T + +LL K
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
T+ A+ +M +N P+ +NS M+N LG+F K + +
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNS-----MLNLYGRLGQF----TKMEKILAEMEN 489
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
D++ YN +I+ + + G L E LF EL K+ PDV T + + A
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 12/268 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PNI +Y ++N EG + A E++ + P Y L + + AG A +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDG-LEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ M + G D YN ++ + G A +F+E+K R + + + + +
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAY 436
Query: 145 NNGRDKEAMDS-YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ RD ++ K + + + N +L + + G+ T+ + +M + +
Sbjct: 437 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
T+NI++N G F + K F DV + + I + L
Sbjct: 497 -----STYNILINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLY 547
Query: 264 SEAETLFEELCSKSLSPDVPTHFACVSA 291
+ +FEE+ +PD T +SA
Sbjct: 548 VKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 36/307 (11%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
K+++ I + + +S+ P+++ +N +I+ + + + A LY ++ + + P+
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESR-YVPTED 191
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL---VYNNLISGFLEL-GNLDKANEL 120
TY L K + AG I A +L EM N ++ VYN I G ++ GN ++A ++
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 121 FDELK-ERCL----VYDGVVN------ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 169
F +K +RC Y+ ++N +YM W Y + Q K
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL-----------YCEMRSHQCKPNIC 300
Query: 170 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
T L+ + G +A +F+Q+ ++ P+ +N ++ G + A
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY-----VYNALMESYSRAGYPYGAAE 355
Query: 230 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
F + D A YN ++ + GL S+AE +FEE+ ++P + +H +
Sbjct: 356 IF----SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 290 SAAGGSR 296
SA +R
Sbjct: 412 SAYSKAR 418
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 11/291 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R EAI +F + P +YN +IN + + ++ +LY + +
Sbjct: 239 MKRKGNTEEAIDVFQRM-KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCK 296
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ TY L F G +A ++ ++ G D VYN L+ + G A E+
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F ++ D ++ + G +A ++ + T + +LL K
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
T+ A+ +M +N P+ +NS M+N LG+F K + +
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNS-----MLNLYGRLGQF----TKMEKILAEMEN 467
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
D++ YN +I+ + + G L E LF EL K+ PDV T + + A
Sbjct: 468 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 12/268 (4%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PNI +Y ++N EG + A E++ + P Y L + + AG A +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDG-LEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ M + G D YN ++ + G A +F+E+K R + + + + +
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAY 414
Query: 145 NNGRDKEAMDS-YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ RD ++ K + + + N +L + + G+ T+ + +M + +
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
T+NI++N G F + K F DV + + I + L
Sbjct: 475 -----STYNILINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 264 SEAETLFEELCSKSLSPDVPTHFACVSA 291
+ +FEE+ +PD T +SA
Sbjct: 526 VKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 17/249 (6%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ VS+N+VI + G++D+AL L+R + +A+++ + G++ A EAL
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK-----NAISWTTMISGYVQADMNKEALQ 233
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM N D++ N +S +LG L++ + L + + D V+ ++ +
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G +EA++ +K++ + + L+ HG +A + F +M PN
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TF ++ C G E F N K + Y I+ GLL
Sbjct: 350 -----TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP---TIEHYGCIVDLLGRAGLLD 401
Query: 265 EAETLFEEL 273
EA+ +E+
Sbjct: 402 EAKRFIQEM 410
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 31/292 (10%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
+I + G VD A+EL+ + T + Y L A L+R M+ K
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERC---------LVYDGVVNATYMEWF 143
G D Y L++G+ G + +A E DE+ R L+ +G++NA Y+E
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE-- 269
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
A + + F T N+L+E + K G+ ++ +T
Sbjct: 270 -------SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMY------YTACKL 316
Query: 204 Q-AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
V+ DT+ ++ +GK EA + K F + Y II C NG+
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC-VEDGHKPFP---SLYAPIIKGMCRNGM 372
Query: 263 LSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKYWNASTFMG 314
+A + F ++ K+ P+ P + ++ G RG + Y T MG
Sbjct: 373 FDDAFSFFSDMKVKAHPPNRPVYTMLITMCG--RGGKFVDAANYLVEMTEMG 422
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 124/272 (45%), Gaps = 20/272 (7%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN++SY ++ ++ G+ + A ++R + ++ P PSA+TY+ + K F+ + EA +
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEE 230
Query: 85 LLREMLNKGHG---ADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA--TY 139
+ +L++ D +Y+ +I + + GN +KA ++F +V GV + TY
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS-----SMVGKGVPQSTVTY 285
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
KE Y + + V+ +L++ + ++ +A ++F++MLD
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P +A +NI+++ G +A F+ + + F D+ Y ++S +
Sbjct: 346 RPTHKA-----YNILLDAFAISGMVEQAKTVFK---SMRRDRIFP-DLWSYTTMLSAYVN 396
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ AE F+ + P++ T+ +
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 20/266 (7%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN++SY ++ ++ G+ + A ++R + ++ P PSA+TY+ + K F+ + EA +
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEE 237
Query: 85 LLREMLNKGHG---ADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA--TY 139
+ +L++ D +Y+ +I + + GN +KA ++F +V GV + TY
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS-----SMVGKGVPQSTVTY 292
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
KE Y + + V+ +L++ + ++ +A ++F++MLD
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P +A +NI+++ G +A F+ + + F D+ Y ++S +
Sbjct: 353 RPTHKA-----YNILLDAFAISGMVEQAKTVFK---SMRRDRIFP-DLWSYTTMLSAYVN 403
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTH 285
+ AE F+ + P++ T+
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTY 429
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ ++Y L + + G+ A + R M + G ++ Y ++ F+E +A E+
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 121 FDEL---KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
F+ L K+ L D + + + G ++A + S++ + + VT N L+
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK---A 234
+ + ++ ++DQM + P+ ++ +++ + EAL+ F + A
Sbjct: 299 ETSYKEVSK---IYDQMQRSDIQPDVV-----SYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G + KA YN ++ F +G++ +A+T+F+ + + PD+ ++ +SA
Sbjct: 351 GVRPTHKA-------YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 10/274 (3%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+ E++ LF Q I P+++++N++++ GR +A +L+ + T P + T+
Sbjct: 154 FQESVKLFQTM-KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTF 212
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA-NELFDELK 125
L GF + EA + ++M D + YN +I G G + A N L LK
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 126 ERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ V+ VV+ T + + EA+ + ++ R K VT N L++ L + +
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+ + D ++ + A ++ TFNI++ + G A+ F++ N K
Sbjct: 333 DE---IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM---LNMKLHP 386
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
D A Y+ +I C AETLF EL K +
Sbjct: 387 -DSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 20/273 (7%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P+ ++N +IN C VD A +++ + P VTY + G AG++ A
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDM-ELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 83 LDLLREMLNKGHGA--DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
++L ML K + + Y L+ G+ +D+A +F ++ R L + V T +
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC--NVLLEVLLKHGKKTQAWALFDQMLDNH 198
+ R E D D P C N+L++ G A +F +ML+
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS------NSKAFAMDVAGYNN 252
P+ S ++++++ +F A F + K K A A YN
Sbjct: 384 LHPD-----SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA---AAYNP 435
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ C NG +AE +F +L + + D P++
Sbjct: 436 MFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSY 467
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 11/259 (4%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
+N++I ++ + G +++L++ + PS +T+ L + GR A DL EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQ-TMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 90 LNK-GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
G DS +N LI+GF + +D+A +F +++ D V T ++ G+
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 149 DKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
K A + ++ + + P V+ L+ + +A +F ML PN AV
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN--AV 317
Query: 207 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
+T ++E + + L A T FA D +N +I C+ G L A
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFT-----TFAPDACTFNILIKAHCDAGHLDAA 372
Query: 267 ETLFEELCSKSLSPDVPTH 285
+F+E+ + L PD ++
Sbjct: 373 MKVFQEMLNMKLHPDSASY 391
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 51/243 (20%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHII----ATAPFG 60
+ +EA+ +FH ++ + PN V+YN +I + R D E+ +I A F
Sbjct: 295 QEIDEAVLVFHDMLSRG-LKPNAVTYNTLIKGLSEAHRYD---EIKDILIGGNDAFTTFA 350
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P A T+ L K AG + A+ + +EMLN DS Y+ LI D+A L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 121 FDEL--------KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV--- 169
F+EL K+ C N + E+ NG+ K+A ++ LM R + P
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMF-EYLCANGKTKQAEKVFRQLMKRGVQDPPSYKT 469
Query: 170 -------------------------------TCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
T +L++ LLK G+ A +ML +
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 199 TPP 201
P
Sbjct: 530 YLP 532
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 29/295 (9%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R +A F T+ IVP++ +Y +INT+C A L+ + P
Sbjct: 612 RVNNVRKAREFFEILVTK-KIVPDLFTYTIMINTYCRLNEPKQAYALFEDM-KRRDVKPD 669
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L LD+ REM D + Y +I+ + L +L K LF
Sbjct: 670 VVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFK 722
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++K R +V D V + ++K + + + K VL++ K G
Sbjct: 723 DMKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIG 775
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+A +FDQM+++ P ++ + ++ C +G EA F + +S K
Sbjct: 776 DLGEAKRIFDQMIESGVDP-----DAAPYTALIACCCKMGYLKEAKMIFDRM-IESGVKP 829
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT----HFACVSAAG 293
DV Y +I+ C NG + +A L +E+ K + P + H+A + A G
Sbjct: 830 ---DVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKG 881
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 130/339 (38%), Gaps = 72/339 (21%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ EAI LF T I P++++Y +I C +G+ A +L + T P V
Sbjct: 411 KVEEAIELFREM-TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK-TPDIVI 468
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L G + G EA + L+ M N+G + +N +I G ++ G LDKA ++ L+
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 126 ERCLVYDGVV-------------------------NATYMEWFFNNGRDKEAMDSYKSLM 160
+ D + + Y F + +K+ + + L+
Sbjct: 529 HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 161 DRQFKMTPVTCNVLLEVLLKHGKKTQAWA----------LFDQMLDNHTPPNFQAVNSDT 210
DR +K+ + +GK AW F+ ++ P+ T
Sbjct: 589 DRMWKLGVEPEKSM------YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF-----T 637
Query: 211 FNIMVNECFNLGKFHEALATFR----------------------KAGTKSNSKAFAM--D 246
+ IM+N L + +A A F + K +AF + D
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPD 697
Query: 247 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
V Y +I+R+C L + LF+++ + + PDV T+
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY 736
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 12/261 (4%)
Query: 28 VSYNNVINTHCDEGRVDVA---LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
V Y N I C D+A L+ R + YR + +G RI +A
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
++ +M G D VY+ +I G + N+ KA ++F+++ ++ + V+ ++ ++ +
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G EA D +K + + V NV + L K GK +A LF +M P+
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD-- 430
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+N + ++ C GK +A + + D+ YN + NGL
Sbjct: 431 VIN---YTTLIGGCCLQGKCSDAFDLM----IEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 265 EAETLFEELCSKSLSPDVPTH 285
EA + + ++ + P TH
Sbjct: 484 EAFETLKMMENRGVKPTYVTH 504
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 36/304 (11%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+A+ +F+ + + N V ++++ +C G A +L++ T V Y
Sbjct: 344 KAVDVFNKMLKKRKRI-NCVIVSSILQCYCQMGNFSEAYDLFKEFRETN-ISLDRVCYNV 401
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
G++ EA++L REM KG D + Y LI G G A +L E+
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
D V+ NG +EA ++ K + +R K T VT N+++E L+ G+ +A
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 189 ALF------------------------DQMLDNHTPPNFQAVNSDTFNIMVNECFN---L 221
A + D + F S F + + C +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 222 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
K + L K G + + Y +I +C + +A FE L +K + PD
Sbjct: 582 SKAQDLLDRMWKLGVEPEK-------SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 282 VPTH 285
+ T+
Sbjct: 635 LFTY 638
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 131/283 (46%), Gaps = 13/283 (4%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ R +R +EA + F + P+++ Y N++ C G + A ++++ + A
Sbjct: 231 LSRKRRASEAQSFFDSL--KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM-KLAGIE 287
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ TY + G+I A D+ +ML+ G +++ +NNL+ ++ G +K ++
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
++++K+ D + +E + + A+ +++ ++ ++ T N + + K
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
A ++ +M++ PN + T+NI++ F K + + +K + +
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPN-----TVTYNILM-RMFVGSKSTDMVLKMKK---EMDD 458
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELC-SKSLSPDV 282
K +V Y +++ FC G + A LF+E+ K L+P +
Sbjct: 459 KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSL 501
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 17/250 (6%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
YN +I+ + D+A L ++ + S T+ L + ++ AG EA+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLI-DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
+ G D + ++ +IS +A FD LK+R D +V + + G
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEI 271
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 209
EA +K + + T +++++ L + G+ ++A +F MLD+ P N+
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP-----NAI 326
Query: 210 TFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 266
TFN ++ G+ + L + +K G + D YN +I C + L A
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP-------DTITYNFLIEAHCRDENLENA 379
Query: 267 ETLFEELCSK 276
+ + K
Sbjct: 380 VKVLNTMIKK 389
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 36/174 (20%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
++YN +I+ + +G++D+AL+LY+ + + P A+TY L A R VEA L+
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
EML+ G Y+ LI G+ + G ++A + F C++ G
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS-----CMLRSGT------------- 504
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-DNHTP 200
K + +V+L+VLL+ + +AW L+ M+ D HTP
Sbjct: 505 -----------------KPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 48/284 (16%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRV--DVALELYRHIIATAPFG 60
R+ ++++A L Q VP+++S+N +IN G + ++A+EL ++ +
Sbjct: 237 RSGKFSKAQELVDAM-RQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSGLR 294
Query: 61 PSAVTYRHLTKG-----------------------------------FISAGRIVEALDL 85
P A+TY L + G EA L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
E+ KG D++ YN+L+ F N +K E++ ++++ D + T + +
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 146 NGRDKEAMDSYKSLMDRQFK-MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ A+ YK + + +T VL++ L K + +A AL +MLD P Q
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAM 245
T++ ++ GK EA TF ++GTK ++ A+++
Sbjct: 475 -----TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 35/254 (13%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++V++ +VI + G + A EL+ + + + VT+ + G++ + ++ A L
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSR----KNVVTWTAMVSGYLRSKQLSIAEML 131
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVVNATYMEWFF 144
+EM + + + +N +I G+ + G +DKA ELFDE+ ER +V ++ +V A
Sbjct: 132 FQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA-----LV 182
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
GR EAM+ L +R + V+ +++ L K+GK +A LFD M +
Sbjct: 183 QRGRIDEAMN----LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER------- 231
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
N ++N M+ + EA F+ + D A +N +I+ F N ++
Sbjct: 232 --NIISWNAMITGYAQNNRIDEADQLFQVMPER--------DFASWNTMITGFIRNREMN 281
Query: 265 EAETLFEELCSKSL 278
+A LF+ + K++
Sbjct: 282 KACGLFDRMPEKNV 295
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 33/288 (11%)
Query: 27 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 86
++ YN +I + + A EL+ +++ P TY L + SA + L
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYG-VTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 87 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 146
+M G+ +D + Y +IS F++LG L+ A E++ E+ E + D VV + F +
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 147 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 206
G ++AM +++ + V N L+++ K G +A A++ ++L + + V
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 207 NSDTFNIMVNECFNLGKFHEALATF--RKAGTKSNSKAFAM------------------- 245
T N M+N +A A F K ++N FAM
Sbjct: 684 Y--TSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 246 ---------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
D YN+++ F +G EA F+E+ S + PD T
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 18/244 (7%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ NI P++V Y +IN D G V A+ Y + A ++V Y L K + G
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMS-YVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 78 RIVEALDLLREML---NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 134
+ EA + R++L NK D N +I+ + E + KA +FD +K+R G
Sbjct: 660 YLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR-----GE 714
Query: 135 VN----ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 190
N A + + NGR +EA K + + + P++ N +L + G+ +A
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 191 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 250
F +M+ + P + TF + LG +A+ + K + + ++
Sbjct: 775 FKEMVSSGIQP-----DDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTL 829
Query: 251 NNII 254
++++
Sbjct: 830 SSLV 833
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 21/305 (6%)
Query: 1 MYR-AKRYNEAIALFHFFFTQSNIVPNIV-----SYNNVINTHCDEGRVDVALELYRHII 54
MY+ A+ + +A F + N + V +YN +I+T+ G++ A E ++ ++
Sbjct: 266 MYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 55 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-DSLVYNNLISGFLELGN 113
P+ VT+ + + + G++ E L++ M K H A D+ YN LIS + +
Sbjct: 326 EEGIV-PTTVTFNTMIHIYGNNGQLGEVTSLMKTM--KLHCAPDTRTYNILISLHTKNND 382
Query: 114 LDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 173
+++A F E+K+ L D V T + F +EA + D ++ T +
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 174 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 233
L + ++ ++W+ F + H N ++S+ ++ ++ G EA F
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRF---HVAGN---MSSEGYSANIDAYGERGYLSEAERVFIC 496
Query: 234 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+ +V IS+ CE +A LFE + S ++PD T+ V
Sbjct: 497 CQEVNKRTVIEYNVMIKAYGISKSCE-----KACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 294 GSRGP 298
+ P
Sbjct: 552 SADMP 556
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R YN+AI F + ++ ++P+ V+Y+ +++ + G+V+ L LY +AT + P
Sbjct: 233 RCNLYNKAIEWFERMY-KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATG-WKPD 290
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
A+ + L K F AG +L+EM + + +VYN L+ G A LF+
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ E L + ++ + ++A+ ++ + +++ M + N LL + G
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 410
Query: 183 KKTQAWALFDQMLDNHT--PPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTK 237
+ +A LF+ M ++ P NF ++ M+N + GK +A+ F KAG +
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNF------SYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 238 SN 239
N
Sbjct: 465 VN 466
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
++ PN+V YN ++ G+ +A L+ ++ A P+ T L K + A +
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE-AGLTPNEKTLTALVKIYGKARWARD 379
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYM 140
AL L EM K D ++YN L++ ++G ++A LF+++KE D +
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML 439
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ + G+ ++AM+ ++ ++ ++ + C L++ L K + +FD +
Sbjct: 440 NIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVK 499
Query: 201 PN 202
P+
Sbjct: 500 PD 501
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 106/269 (39%), Gaps = 9/269 (3%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
++Y+ +I + A+E + + T P VTY + + +G++ E L L
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTG-LMPDEVTYSAILDVYSKSGKVEEVLSLYE 280
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
+ G D++ ++ L F E G+ D + E+K + + VV T +E G
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+ A + +++ T L+++ K A L+++M P +F
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF---- 396
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
+N ++N C ++G EA F + D Y +++ + G +A
Sbjct: 397 -ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP---DNFSYTAMLNIYGSGGKAEKAM 452
Query: 268 TLFEELCSKSLSPDVPTHFACVSAAGGSR 296
LFEE+ + +V V G ++
Sbjct: 453 ELFEEMLKAGVQVNVMGCTCLVQCLGKAK 481
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 9/229 (3%)
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
TY + A + E LL EM+ G +++ YN LI + L +A +F+++
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+E D V T ++ G AMD Y+ + + T +V++ L K G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
A LF +M+ PN TFNIM+ + AL +R + F
Sbjct: 481 PAAHRLFCEMVGQGCTPNLV-----TFNIMIALHAKARNYETALKLYRDM----QNAGFQ 531
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
D Y+ ++ G L EAE +F E+ K+ PD P + V G
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RA EA+ +F+ ++ P+ V+Y +I+ H G +D+A+++Y+ + A P
Sbjct: 406 RANYLKEAMNVFNQM-QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQEAGLSPD 463
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY + AG + A L EM+ +G + + +N +I+ + N + A +L+
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+++ D V + ME + G +EA + + + + +L+++ K G
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNS 208
+AW + ML PN NS
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNS 609
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 44/301 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY-RHIIATAPFGP 61
RA+ I++ ++ I P++ +N++++ E +D+A E + R ++A+ G
Sbjct: 124 RARLIKRVISVVDLV-SKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHG- 180
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
TY L KG RI + LL+ M G +++VYN L+ + G + +A L
Sbjct: 181 DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLM 240
Query: 122 DELK---------------------------ERC----LVYDGVVNATYMEWFFNNGRDK 150
E+K E+C V D V ME N GR
Sbjct: 241 SEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 151 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 210
EA++ + + + K+ V CN L++ GK A F +M PN + T
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVE-----T 355
Query: 211 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 270
+N+++ ++G AL TF T A + A +N +I G + +
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKT----DAIRWNFATFNTLIRGLSIGGRTDDGLKIL 411
Query: 271 E 271
E
Sbjct: 412 E 412
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 118/319 (36%), Gaps = 62/319 (19%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 83
VP++V+ V+ C+EGRV ALE+ + + V L KG+ + G++ A
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG-KVDVVACNTLVKGYCALGKMRVAQ 338
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
EM KG+ + YN LI+G+ ++G LD A + F+++K + ++ T +
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 144 FNNGRDKEAMDSYKSLMDRQF----KMTPVTCNVL-----------LEVLLK-------- 180
GR + + + + D ++ P C + LE LLK
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRA 458
Query: 181 ------------HGKKTQAWALFDQMLDNHTPPNFQAVNS---------------DTFNI 213
G +DQM+ P+ + + N
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIND 518
Query: 214 MVNECF--NLGKFHEALATFRKAGTKSNSKAFAMDVA---------GYNNIISRFCENGL 262
MV + F+ + F K N F D+A YN ++ C G
Sbjct: 519 MVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD 578
Query: 263 LSEAETLFEELCSKSLSPD 281
+ +A LF + KS+ PD
Sbjct: 579 IQKAWLLFSRMVEKSIVPD 597
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM+ G +++ YN LI + L++A +F++++E D V T ++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G AMD Y+ + T +V++ L K G A LF +M+D PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T+NIM++ + AL +R + F D Y+ ++ G L
Sbjct: 506 -----TYNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAG 293
EAE +F E+ K+ PD P + V G
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 17/297 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK++ AI + PN V+YN +I+++ ++ A+ ++ + A P
Sbjct: 376 RAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPD 433
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L AG + A+D+ + M G D+ Y+ +I+ + G+L A++LF
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ ++ + V M+ + A+ Y+ + + F+ VT ++++EVL G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSN 239
+A A+F +M + P + + ++V+ G +A ++ AG + N
Sbjct: 554 YLEEAEAVFTEMQQKNWIP-----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
V N+++S F ++EA L + + + L P + T+ +S R
Sbjct: 609 -------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM+ G +++ YN LI + L++A +F++++E D V T ++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G AMD Y+ + T +V++ L K G A LF +M+D PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T+NIM++ + AL +R + F D Y+ ++ G L
Sbjct: 506 -----TYNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAG 293
EAE +F E+ K+ PD P + V G
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 17/297 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK++ AI + PN V+YN +I+++ ++ A+ ++ + A P
Sbjct: 376 RAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPD 433
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L AG + A+D+ + M G D+ Y+ +I+ + G+L A++LF
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ ++ + V M+ + A+ Y+ + + F+ VT ++++EVL G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSN 239
+A A+F +M + P + + ++V+ G +A ++ AG + N
Sbjct: 554 YLEEAEAVFTEMQQKNWIP-----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
V N+++S F ++EA L + + + L P + T+ +S R
Sbjct: 609 -------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 14/269 (5%)
Query: 29 SYNNVINTHCDEGRVDVALELYRHI-----IATAPFGPSAVTYRHLTKGFISAGRIVEAL 83
SYN I+ G +D AL L++ + + + FGP TY L G+ +AL
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
+ E+ GH D+ Y LI G + +D A ++ E++ V D +V ++
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ EA ++ ++ + + T N+L++ L ++G+ + LF +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL-----KKKG 424
Query: 204 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 263
Q V++ TF+I+ + GK A+ + T + F++D+ ++++ F + G
Sbjct: 425 QFVDAITFSIVGLQLCREGKLEGAVKLVEEMET----RGFSVDLVTISSLLIGFHKQGRW 480
Query: 264 SEAETLFEELCSKSLSPDVPTHFACVSAA 292
E L + + +L P+V A V A+
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEAS 509
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
N ++ + +G + +A +L+ ++ TY + F+ G A +L +M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 150
AD YN +I G ++G D A+ + D L ++ D V+ T + R
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 151 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
EA + + V+ N ++EV K GK +A+ MLD PN
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL EM+ G +++ YN LI + L++A +F++++E D V T ++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G AMD Y+ + T +V++ L K G A LF +M+D PN
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T+NIM++ + AL +R + F D Y+ ++ G L
Sbjct: 506 -----TYNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAG 293
EAE +F E+ K+ PD P + V G
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 17/297 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK++ AI + PN V+YN +I+++ ++ A+ ++ + A P
Sbjct: 376 RAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPD 433
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
VTY L AG + A+D+ + M G D+ Y+ +I+ + G+L A++LF
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E+ ++ + V M+ + A+ Y+ + + F+ VT ++++EVL G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSN 239
+A A+F +M + P + + ++V+ G +A ++ AG + N
Sbjct: 554 YLEEAEAVFTEMQQKNWIP-----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
V N+++S F ++EA L + + + L P + T+ +S R
Sbjct: 609 -------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 24/272 (8%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHI---IATAPFGPSAVTYRHLTKGFISAGRIVE 81
P+ SY ++ C EG+++ A L + I+ G V YR L AG + +
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGN--LDKANELFDELKER----CL-VYDGV 134
A+++L ++L KG A Y+++ +G E + +++ L E R CL Y +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD-Q 193
F G+ E + ++ + F+ TP ++ L + GK +A ++ + +
Sbjct: 305 ATD-----LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M+ H P +N+++ + GK EA+ +K + + A + Y +
Sbjct: 360 MMQGHCLPTV-----GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA---NEETYQTL 411
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ C +G EA + EE+ KS P V T+
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 15/282 (5%)
Query: 6 RYNEAIALFHFFF---TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ EA L + F +Q +IV Y +++ CD G VD A+E+ I+ P
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 63 AVTYRHLTKG-FISAGRIVEALD-LLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
Y H+ G + S+ +E + LL E L +G Y+ + + E G L + E+
Sbjct: 262 R-CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEV 320
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY-KSLMDRQFKMTPVTCNVLLEVLL 179
++ + + ++ G+ KEA+ K +M T NVL++ L
Sbjct: 321 LLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLC 380
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
GK +A +M + N +T+ +V+ G+F EA + KS+
Sbjct: 381 DDGKSMEAVGYLKKMSKQVSC----VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSH 436
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
V Y+ +I C+ EA EE+ S+ + P+
Sbjct: 437 FPG----VETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RA + EA+++ + Q + +P + YN +I CD+G+ A+ + + +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY+ L G G+ +EA ++ EML K H Y+ +I G ++ +A +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 123 EL 124
E+
Sbjct: 465 EM 466
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 24/272 (8%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHI---IATAPFGPSAVTYRHLTKGFISAGRIVE 81
P+ SY ++ C EG+++ A L + I+ G V YR L AG + +
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGN--LDKANELFDELKER----CL-VYDGV 134
A+++L ++L KG A Y+++ +G E + +++ L E R CL Y +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD-Q 193
F G+ E + ++ + F+ TP ++ L + GK +A ++ + +
Sbjct: 305 ATD-----LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M+ H P +N+++ + GK EA+ +K + + A + Y +
Sbjct: 360 MMQGHCLPTV-----GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA---NEETYQTL 411
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+ C +G EA + EE+ KS P V T+
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 15/282 (5%)
Query: 6 RYNEAIALFHFFF---TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ EA L + F +Q +IV Y +++ CD G VD A+E+ I+ P
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 63 AVTYRHLTKG-FISAGRIVEALD-LLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
Y H+ G + S+ +E + LL E L +G Y+ + + E G L + E+
Sbjct: 262 R-CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEV 320
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY-KSLMDRQFKMTPVTCNVLLEVLL 179
++ + + ++ G+ KEA+ K +M T NVL++ L
Sbjct: 321 LLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLC 380
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
GK +A +M + N +T+ +V+ G+F EA + KS+
Sbjct: 381 DDGKSMEAVGYLKKMSKQVSC----VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSH 436
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
V Y+ +I C+ EA EE+ S+ + P+
Sbjct: 437 FPG----VETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RA + EA+++ + Q + +P + YN +I CD+G+ A+ + + +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY+ L G G+ +EA ++ EML K H Y+ +I G ++ +A +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 123 EL 124
E+
Sbjct: 465 EM 466
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 45 VALELYRH-----------IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 93
V E +RH ++A + R + + F GR+ EA+ ++ +M N+G
Sbjct: 118 VGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQG 177
Query: 94 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 153
S+ N ++ +ELG ++ A +FDE+ R +V D + F +G+ +EA
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 154 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 213
++ R F TC ++L L ++G +A F +M+D PN +N F
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL--IN---FTS 292
Query: 214 MVNECFNLGKFHEA---LATFRKAGTKSN-----------------SKAFAM-------- 245
+++ G +A L + G K N KAF +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 246 ----DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 285
+V Y ++I +C+ L+ AE LF + + L P+V T+
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 58/314 (18%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
Q +P+ + ++ C+ G V+ A+ +R +I F P+ + + L G G I
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG-FKPNLINFTSLIDGLCKKGSI 303
Query: 80 VEALDLLREMLNKG-------HGA--DSLV---------------------------YNN 103
+A ++L EM+ G H A D L Y +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 104 LISGFLELGNLDKANELFDELKERCL-----VYDGVVNATYMEWFFNNGRDKEAMDSYKS 158
+I G+ + L++A LF +KE+ L Y ++N F GR E M+
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF--GRAYELMN---- 417
Query: 159 LM-DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 217
LM D F T N ++ L K + +A+ L ++ + T+ I++ E
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE-----ADGVTYTILIQE 472
Query: 218 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 277
++ALA F + N F D+ N +I+ FC + E+E LF+ + S
Sbjct: 473 QCKQNDINQALAFF----CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 278 LSPDVPTHFACVSA 291
L P T+ + +S
Sbjct: 529 LIPTKETYTSMISC 542
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 106/272 (38%), Gaps = 10/272 (3%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
+A LF PN+ +Y ++I +C E +++ A L+ + F P+ TY
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF-PNVNTYTT 398
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L G AG A +L+ M ++G + YN I + +A EL ++
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 188
L DGV ++ +A+ + + F+ N+L+ + K ++
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
LF ++ P +T+ M++ G AL F D
Sbjct: 519 RLFQLVVSLGLIP-----TKETYTSMISCYCKEGDIDLALKYFHNM----KRHGCVPDSF 569
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSP 280
Y ++IS C+ ++ EA L+E + + LSP
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
+I P ++YN++I+ C + RVD A + + A+ P VT+ L G+ A R+
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
+++ EM +G A+++ Y LI GF ++G+LD A +L +E+
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELY-----RHIIATAPFGPSAVTYRHLTKGFISAGRI 79
P++V+++ +IN +C RVD +E++ R I+A + VTY L GF G +
Sbjct: 43 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA------NTVTYTTLIHGFCQVGDL 96
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
A DLL EM++ G D + ++ +++G L KA + ++L++
Sbjct: 97 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ +TY + GF R+ +A +L M +KG D + ++ LI+G+ + +D E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
F E+ R +V + V T + F G A D ++ +T + +L L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 181 HGKKTQAWALFDQM 194
+ +A+A+ + +
Sbjct: 128 KKELRKAFAILEDL 141
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 56/261 (21%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+IV+Y+ +++ C GRVD AL + R + + P+ Y L + + R+ EA+D
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI-CKPTTFIYSVLVHTYGTENRLEEAVD 328
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EM G AD V+N+LI F + + + E+K + GV
Sbjct: 329 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK-----GV---------- 373
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
TP +CN++L L++ G+K +A+ +F +M+ P
Sbjct: 374 ----------------------TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP-- 409
Query: 203 FQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
++DT+ +++ E + + RK G + F++ + G CE
Sbjct: 410 ----DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING-------LCE 458
Query: 260 NGLLSEAETLFEELCSKSLSP 280
+A L EE+ + P
Sbjct: 459 ERTTQKACVLLEEMIEMGIRP 479
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
T+ + + + A ++ EA+ M + + +N L+S + N+ KA E+F+ +
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
++R D + +E + +A + ++ ++D VT ++++++L K G+
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+A + M P+ + ++++V+ + EA+ TF + +S KA
Sbjct: 289 DEALGIVRSM-----DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM-ERSGMKA-- 340
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
DVA +N++I FC+ + + +E+ SK ++P+
Sbjct: 341 -DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 22/293 (7%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
NE A+ + F ++++ + V N VI++ EG V A E+ II T
Sbjct: 619 NETKAILNLMF-KTDLGSSAV--NRVISSFVREGDVSKA-EMIADIIIRLGLRMEEETIA 674
Query: 68 HLTKGFISAGRIVEALDL-LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L + ++ EA L L +K G V ++I ++ G L+ A LF E E
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGESKTPGKS--VIRSMIDAYVRCGWLEDAYGLFMESAE 732
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ V + + N G+ +EA ++ +++ ++ V N L++ +L+ GK
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC 792
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAF 243
A ++++M + P + Q T+N M++ L K E + R++G
Sbjct: 793 ASEIYERMHTSGVPCSIQ-----TYNTMISVYGRGLQLDKAIEIFSNARRSG-------L 840
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+D Y N+I + + G +SEA +LF E+ K + P P++ V SR
Sbjct: 841 YLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSR 893
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 99 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 158
+VY ++ + ++G + A E F E+ E D V T + + GR + YK+
Sbjct: 189 VVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKA 248
Query: 159 LMDRQFKMTPVTCNVLLEVLLK---HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 215
+ +R+ ++ N +L L K HGK W +M++ PPN T+ ++V
Sbjct: 249 VQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWL---EMVEEGVPPN-----EFTYTLVV 300
Query: 216 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 275
+ G EAL F + S F + Y+++IS + G +A L+E++ S
Sbjct: 301 SSYAKQGFKEEALKAF----GEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRS 356
Query: 276 KSLSPDVPTHFACVS 290
+ + VP+++ C +
Sbjct: 357 QGI---VPSNYTCAT 368
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 46/324 (14%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
++A LF F + + P+ +Y+ +IN H G+ A+ L ++ A PS TY
Sbjct: 160 DQARGLF-FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYN 217
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
+L S+G EAL++ ++M + G G D + +N ++S + KA F+ +K
Sbjct: 218 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKT 185
+ D + G+ +A+D + S+ +++ + P VT ++ + G+
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 186 QAWALFDQMLDNHTPPNFQAVNS------------------------------DTFNIMV 215
A+F+ M+ PN + N+ ++ ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 216 N---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
N GK E RK K N V YN +I + NG L+EA +F +
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPN-------VVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 273 LCSKSLSPDVPTHFACVSAAGGSR 296
+ + P+V + C A SR
Sbjct: 451 MEQDGIKPNVVS--VCTLLAACSR 472
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 18/293 (6%)
Query: 11 IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 70
+ +F + Q N YN +I H VD A L+ + P A TY L
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM-QKWSCKPDAETYDALI 185
Query: 71 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 130
AG+ A++L+ +ML YNNLI+ GN +A E+ ++ + +
Sbjct: 186 NAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG 245
Query: 131 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAW 188
D V + + + +GR SY LM + K+ P T N+++ L K G+ +QA
Sbjct: 246 PDLVTHNIVLS-AYKSGRQYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 189 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAM 245
LF+ M + V TF +++ G+ A F G K N
Sbjct: 304 DLFNSMREKRAECRPDVV---TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN------ 354
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGP 298
+ YN ++ + +G+ A ++ ++ + PDV ++ +++ G SR P
Sbjct: 355 -IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V++ ++++ + +G ++ ++ ++A P+ V+Y L + G AL
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF-----DELKERCLVYDGVVNATY 139
+L ++ G D + Y L++ + KA E+F + K + Y+ +++A
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA-- 434
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ +NG EA++ ++ + K V+ LL + KK D +L
Sbjct: 435 ---YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV----DTVLSAAQ 487
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAG------- 249
+N+ +N + N + +A+A + RK K++S F + ++G
Sbjct: 488 SRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 250 ---------------------YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFAC 288
Y++++ + + G ++EAE++F ++ PDV + +
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 289 VSAAGGS 295
+ A S
Sbjct: 607 LHAYNAS 613
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R+++ +A +F + PN+V+YN +I+ + G + A+E++R + P+
Sbjct: 402 RSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPN 459
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V+ L + + V +L ++G ++ YN+ I ++ L+KA L+
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++++ + D V + + EA+ K + D +T + +L K G
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNS 208
+ T+A ++F+QM P+ A S
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTS 605
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 46/324 (14%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
++A LF F + + P+ +Y+ +IN H G+ A+ L ++ A PS TY
Sbjct: 28 DQARGLF-FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYN 85
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
+L S+G EAL++ ++M + G G D + +N ++S + KA F+ +K
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKT 185
+ D + G+ +A+D + S+ +++ + P VT ++ + G+
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 186 QAWALFDQMLDNHTPPNFQAVNS------------------------------DTFNIMV 215
A+F+ M+ PN + N+ ++ ++
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 216 N---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
N GK E RK K N V YN +I + NG L+EA +F +
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPN-------VVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 273 LCSKSLSPDVPTHFACVSAAGGSR 296
+ + P+V + C A SR
Sbjct: 319 MEQDGIKPNVVS--VCTLLAACSR 340
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 18/274 (6%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
YN +I H VD A L+ + P A TY L AG+ A++L+ +M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEM-QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
L YNNLI+ GN +A E+ ++ + + D V + + + +GR
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ 131
Query: 150 KEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
SY LM + K+ P T N+++ L K G+ +QA LF+ M + V
Sbjct: 132 YSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV- 189
Query: 208 SDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TF +++ G+ A F G K N + YN ++ + +G+
Sbjct: 190 --TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN-------IVSYNALMGAYAVHGMSG 240
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAGGSRGP 298
A ++ ++ + PDV ++ +++ G SR P
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V++ ++++ + +G ++ ++ ++A P+ V+Y L + G AL
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF-----DELKERCLVYDGVVNATY 139
+L ++ G D + Y L++ + KA E+F + K + Y+ +++A
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA-- 302
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ +NG EA++ ++ + K V+ LL + KK D +L
Sbjct: 303 ---YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV----DTVLSAAQ 355
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAG------- 249
+N+ +N + N + +A+A + RK K++S F + ++G
Sbjct: 356 SRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 250 ---------------------YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFAC 288
Y++++ + + G ++EAE++F ++ PDV + +
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 289 VSAAGGS 295
+ A S
Sbjct: 475 LHAYNAS 481
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R+++ +A +F + PN+V+YN +I+ + G + A+E++R + P+
Sbjct: 270 RSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPN 327
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V+ L + + V +L ++G ++ YN+ I ++ L+KA L+
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++++ + D V + + EA+ K + D +T + +L K G
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 447
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNS 208
+ T+A ++F+QM P+ A S
Sbjct: 448 QVTEAESIFNQMKMAGCEPDVIAYTS 473
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 12/276 (4%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ I PN+V+ N ++ C +++A+ + + G + VTY L S
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG-NVVTYMTLIHACCSVS 490
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ +A+ +ML G D+ +Y LISG ++ A + ++LKE D +
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ F + ++ + + K +T N L+ KH + +QM ++
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
P T+ +++ ++G+ EAL F+ G S + YN +I+ F
Sbjct: 611 GLDPTVT-----TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP---NTVIYNILINAF 662
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTH---FACVS 290
+ G +A +L EE+ K + P+V T+ F C++
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 15/280 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-----FGPSAVTYRHLTKGFI 74
+ I P++V+ +INT C RVD ALE++ + ++ + L G
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 75 SAGRIVEALDLLREM-LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
GR+ EA +LL M L + +++ YN LI G+ G L+ A E+ +KE + +
Sbjct: 382 KVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V T + + A+ + + K VT L+ +A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
ML+ P ++ + +++ + + H+A+ K F++D+ YN +
Sbjct: 502 MLEAGCSP-----DAKIYYALISGLCQVRRDHDAIRVVEKL----KEGGFSLDLLAYNML 552
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
I FC+ + + ++ + PD T+ +S G
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 124/297 (41%), Gaps = 20/297 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGRVDVALELYRHIIATA 57
+++R +EA+ +F + N++ +N +I+ C GR+ A EL +
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
P+AVTY L G+ AG++ A +++ M + + N ++ G L+ A
Sbjct: 401 RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
F ++++ + + V T + + ++AM Y+ +++ L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKA 234
L + + A + +++ + + A +N+++ + N K +E L K
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G K +S YN +IS F ++ E + E++ L P V T+ A + A
Sbjct: 576 GKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 10/259 (3%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
I PN ++ +I C EGR+ ++L I PS + L + RI E
Sbjct: 229 RIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCL-PSVIVNTSLVFRVLEEMRIEE 287
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 141
++ LL+ +L K D++ Y+ ++ + G+L A ++FDE+ +R + V ++
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 201
G KEA + + T N L+ + G + + + M+ P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 202 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
+ A N + V++ N+ + +E L TKS K F D Y+++I F E
Sbjct: 408 SCSAFNEMVKS--VSKIENVNRANEIL-------TKSIDKGFVPDEHTYSHLIRGFIEGN 458
Query: 262 LLSEAETLFEELCSKSLSP 280
+ +A LF E+ + +SP
Sbjct: 459 DIDQALKLFYEMEYRKMSP 477
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 16/291 (5%)
Query: 1 MYRAKRYNEA-IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF 59
+ + KR +A + L +S+I PN ++N I+ C RV+ AL + + F
Sbjct: 200 LCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG-F 255
Query: 60 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE 119
P ++Y + + + ++ ++L EM G +S+ Y ++S ++A
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLEVL 178
+ +K D + + GR +EA ++ M + + T N ++ +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
H ++ +A L +M N + T+ ++ CF G E ++ TK
Sbjct: 376 CHHDEEDKAIELLKEM----ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 431
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
+ ++D + Y +I R C + A LFEE+ S+ ++ P H C+
Sbjct: 432 H---LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDIT---PRHRTCL 476
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 16/291 (5%)
Query: 1 MYRAKRYNEA-IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF 59
+ + KR +A + L +S+I PN ++N I+ C RV+ AL + + F
Sbjct: 200 LCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG-F 255
Query: 60 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE 119
P ++Y + + + ++ ++L EM G +S+ Y ++S ++A
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLEVL 178
+ +K D + + GR +EA ++ M + + T N ++ +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
H ++ +A L +M N + T+ ++ CF G E ++ TK
Sbjct: 376 CHHDEEDKAIELLKEM----ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 431
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
+ ++D + Y +I R C + A LFEE+ S+ ++ P H C+
Sbjct: 432 H---LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDIT---PRHRTCL 476
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 129/316 (40%), Gaps = 70/316 (22%)
Query: 5 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 64
+R EA+ LF + N VS++ +I C G VD A+ L+R + P S+
Sbjct: 150 RRIGEALLLFEKMPER-----NAVSWSAMITGFCQNGEVDSAVVLFRKM----PVKDSS- 199
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY--NNLISGFLELGNLDKANELFD 122
L G I R+ EA +L + + G + LVY N LI G+ + G ++ A LFD
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ + C D + +F V+ N +++ LK G
Sbjct: 260 QIPDLC------------------------GDDHGGEFRERFCKNVVSWNSMIKAYLKVG 295
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
A LFDQM D T ++N M++ ++ + +A A F + + ++ +
Sbjct: 296 DVVSARLLFDQMKDRDTI---------SWNTMIDGYVHVSRMEDAFALFSEMPNR-DAHS 345
Query: 243 FAMDVAGY------------------------NNIISRFCENGLLSEAETLFEELCSKSL 278
+ M V+GY N+II+ + +N EA LF + +
Sbjct: 346 WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
Query: 279 SPDVPTHFACVSAAGG 294
PD T + +SA+ G
Sbjct: 406 KPDPHTLTSLLSASTG 421
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 12/276 (4%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ I PN+V+ N ++ C +++A+ + + G + VTY L S
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG-NVVTYMTLIHACCSVS 490
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ +A+ +ML G D+ +Y LISG ++ A + ++LKE D +
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ F + ++ + + K +T N L+ KH + +QM ++
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
P T+ +++ ++G+ EAL F+ G S + YN +I+ F
Sbjct: 611 GLDPTVT-----TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP---NTVIYNILINAF 662
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTH---FACVS 290
+ G +A +L EE+ K + P+V T+ F C++
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 117/283 (41%), Gaps = 15/283 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-----FGPSAVTYRHLTKGFI 74
+ I P++V+ +INT C RVD ALE++ + ++ + L G
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 75 SAGRIVEALDLLREM-LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
GR+ EA +LL M L + +++ YN LI G+ G L+ A E+ +KE + +
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V T + + A+ + + K VT L+ +A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
ML+ P ++ + +++ + + H+A+ K F++D+ YN +
Sbjct: 502 MLEAGCSP-----DAKIYYALISGLCQVRRDHDAIRVVEKL----KEGGFSLDLLAYNML 552
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
I FC+ + + ++ + PD T+ +S G +
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 12/232 (5%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R N A+ F + + N+V+Y +I+ C V+ A+ Y ++ A
Sbjct: 451 MCRHHGLNMAVVFF-MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCS 508
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P A Y L G R +A+ ++ ++ G D L YN LI F + N +K E+
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVL 178
++++ D + T + FF +D E+++ M R+ + P T +++
Sbjct: 569 LTDMEKEGKKPDSITYNTLIS-FFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAY 626
Query: 179 LKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 229
G+ +A LF M L + P N+ +NI++N LG F +AL+
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNP-----NTVIYNILINAFSKLGNFGQALS 673
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 124/297 (41%), Gaps = 20/297 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGRVDVALELYRHIIATA 57
+++R +EA+ +F + N++ +N +I+ C GR+ A EL +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
P+AVTY L G+ AG++ A +++ M + + N ++ G L+ A
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
F ++++ + + V T + + ++AM Y+ +++ L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKA 234
L + + A + +++ + + A +N+++ + N K +E L K
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G K +S YN +IS F ++ E + E++ L P V T+ A + A
Sbjct: 576 GKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P + +Y VI+ +C G +D AL+L++ + + P+ V Y L F G +AL
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L EM K + YN L E + +L DE+ E +VN +W F
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEH------LVNQIRSQWRF 727
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 28/274 (10%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
H ++NI + N +I + G +D +++ + VT+ + G+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER----RDNVTWNSMISGY 594
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
I + +ALDL+ ML G DS +Y ++S F + L++ E+ CL D
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWA 189
VV + ++ + GR A+ R F PV + N ++ +HG+ +A
Sbjct: 655 VVGSALVDMYSKCGRLDYAL--------RFFNTMPVRNSYSWNSMISGYARHGQGEEALK 706
Query: 190 LFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 248
LF+ M LD TPP+ TF +++ C + G E F + S+S A +
Sbjct: 707 LFETMKLDGQTPPDHV-----TFVGVLSACSHAGLLEEGFKHFE---SMSDSYGLAPRIE 758
Query: 249 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 282
++ + G L + E E++ + P+V
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKM---PMKPNV 789
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 16/296 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R + ++AL + ++ P++ +YN V+ + D+A L+ + A P
Sbjct: 131 RENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA-LAPD 189
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY L F G AL L++M D ++Y+NLI L + KA +F
Sbjct: 190 RYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFS 249
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
LK + D V + + + +EA K + + V+ + LL V +++
Sbjct: 250 RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENH 309
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSN 239
K +A ++F +M + + A++ T NIM++ L EA F RK + N
Sbjct: 310 KFLEALSVFAEMKEVNC-----ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
V YN I+ + E L EA LF + K + +V T+ + G +
Sbjct: 365 -------VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 23/287 (8%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
EA LF + + +I PN+VSYN ++ + + A+ L+R ++ + VTY
Sbjct: 347 KEADRLF-WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR-LMQRKDIEQNVVTYN 404
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
+ K + +A +L++EM ++G +++ Y+ +IS + + G LD+A LF +L+
Sbjct: 405 TMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS 464
Query: 128 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 187
+ D V+ T + + G M K L+ + + +L K G+ +A
Sbjct: 465 GVEIDQVLYQTMIVAYERVG----LMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEA 520
Query: 188 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFA 244
+F Q ++ + + F M+N ++ + F R AG +S A
Sbjct: 521 TWVFRQAFESG-----EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIA 575
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKS-LSPDVPTHFACVS 290
M +++ + + +A+T++ E+ + + PD HF +S
Sbjct: 576 M-------VLNAYGKQREFEKADTVYREMQEEGCVFPD-EVHFQMLS 614
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 50/229 (21%)
Query: 9 EAIALFHFFFT--QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
E L H FF Q + +PN ++Y ++NT EG+ D A+ + + G +A+ Y
Sbjct: 642 EKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYY 701
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
L + SAGR E L++L+++ + + Y LI ++ GN+ A +FD++K+
Sbjct: 702 -DLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK 760
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKK 184
C +P VTCN++L+ L+ G
Sbjct: 761 VC--------------------------------------SPNLVTCNIMLKAYLQGGLF 782
Query: 185 TQAWALFDQMLD--NHTP--PNFQAV---NSDTFNIMVNECFNLGKFHE 226
+A LF +M + NH +F++ ++ TFN M++ C K+ +
Sbjct: 783 EEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDD 831
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 81/330 (24%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG------------ 72
PN ++N+VI + + +VAL ++R ++ P P ++ + K
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 73 ----FISAGRIVEAL---------------DLLREMLNKGHGADSLVYNNLISGFLELGN 113
FI +G + + ++ R++L++ D++ +N+L+S +LE G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 114 LDKANELFDELKERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 172
+D+A LFDE++ER V + +M + G KEA + + S+ R V+ N
Sbjct: 222 VDEARALFDEMEER-----NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV----VSWN 272
Query: 173 VLLEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNS--------------------DT 210
++ G + +F++MLD+ T P F V+ D
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 211 FNI---------MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 261
I +V+ GK +AL FR + DV+ +N+IIS +G
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR--------DVSTWNSIISDLSVHG 384
Query: 262 LLSEAETLFEELCSKSLSPDVPTHFACVSA 291
L +A +F E+ + P+ T +SA
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 137/351 (39%), Gaps = 102/351 (29%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+VS+ ++ + G+VDVA L+ + + V++ + GF+ GRI +A L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK-----NKVSWTVMLIGFLQDGRIDDACKL 163
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL---------------- 129
+ +K D++ ++I G + G +D+A E+FDE+ ER +
Sbjct: 164 YEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 130 -----VYDGVVNATYMEW------FFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVL 174
++D + T + W + NGR ++A + F++ PV CN +
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA--------EELFEVMPVKPVIACNAM 271
Query: 175 LEVLLKHGKKTQAWALFDQMLDN-----------HTPPNFQAVNSDTFNIMVNE------ 217
+ L + G+ +A +FD M + H F+ D F +M +
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 218 ---------CFNLGKFHEA----------------------LATFRKAGTKSNSKAF--- 243
C +L H + + K G SK
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 244 --AMDVAGYNNIISRFCENGLLSEAETLFEEL-CSKSLSPDVPTHFACVSA 291
+ D+ +N+IIS + +GL EA +F E+ S S P+ T A +SA
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 96/260 (36%), Gaps = 45/260 (17%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P + YN +++ G D+AL +Y + T+ L KG AGRI E L+
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDG-LVEESTTFMILVKGLCKAGRIEEMLE 284
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L+ M D Y +I + GNLD + ++DE++ + D + T +
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+GR + + + + +Q + VL+E + GK A L++ ++D+
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDS------- 397
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ D+ YN +I C +
Sbjct: 398 -------------------------------------GYIADIGIYNAVIKGLCSVNQVD 420
Query: 265 EAETLFEELCSKSLSPDVPT 284
+A LF+ + L PD T
Sbjct: 421 KAYKLFQVAIEEELEPDFET 440
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
F + +V ++ ++ C GR++ LE+ + + P Y + K +S G
Sbjct: 254 FKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEG 312
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 137
+ +L + EM D + Y L+ G + G +++ ELF E+K + ++ D +
Sbjct: 313 NLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 138 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+E F +G+ + A + ++ L+D + N +++ L + +A+ LF ++
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 198 HTPPNFQAVN 207
P+F+ ++
Sbjct: 433 ELEPDFETLS 442
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS----AV 64
+A FH + + VP+I +Y ++ C G +D + L R + GP A+
Sbjct: 559 KAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYAL 618
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
T H+ KG +A ++++ +D EM +G + ++Y +ISG + G + A E+F EL
Sbjct: 619 TVCHVCKGS-NAEKVMKVVD---EMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEA 152
K+R ++ + + Y E + K A
Sbjct: 675 KKRKVMTEADM-VVYEEMLIEQTKKKTA 701
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 38/322 (11%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R EA ALF QS I P +YN ++ + G + A + + P T
Sbjct: 319 RTLEAEALFEEL-RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG-VSPDEHT 376
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L +++AGR A +L+EM +S V++ L++GF + G K ++ E+K
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+ D ++ F AM ++ ++ + VT N L++ KHG+
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSN--S 240
A +F+ M P + T+NIM+N + ++ + L + G N +
Sbjct: 497 VAEEMFEAMERRGCLPC-----ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 241 KAFAMDVAG--------------------------YNNIISRFCENGLLSEAETLFEELC 274
+DV G YN +I+ + + GL +A F +
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 275 SKSLSPDVPTHFACVSAAGGSR 296
S L P + + ++A G R
Sbjct: 612 SDGLKPSLLALNSLINAFGEDR 633
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 45/295 (15%)
Query: 32 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 91
++I+ D GR A L+ + + P Y L KG++ G + +A ++ EM
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSG-IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 151
+G D Y+ LI ++ G + A + E++ + + V + + F + G ++
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 152 AMDSYKSLM------DRQF----------------KMTP-------------VTCNVLLE 176
K + DRQF MT VT N L++
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 177 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
KHG+ A +F+ M P + T+NIM+N + ++ + ++
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLP-----CATTYNIMINSYGDQERWDD----MKRLLG 538
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
K S+ +V + ++ + ++G ++A EE+ S L P + A ++A
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 16/262 (6%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P+ YN VI+T +D A+ + +++ P VT+ L GR + A
Sbjct: 440 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
++ M +G + YN +I+ + + D L ++K + ++ + V + T ++
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ +GR +A++ + + K + N L+ + G QA F M + P+
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCE 259
A+NS ++N + EA A ++ G K DV Y ++
Sbjct: 619 LLALNS-----LINAFGEDRRDAEAFAVLQYMKENGVKP-------DVVTYTTLMKALIR 666
Query: 260 NGLLSEAETLFEELCSKSLSPD 281
+ ++EE+ PD
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPD 688
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ S+ I+ +CD G V A ++ + P+ T+ H+ K ++ +A
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRM-KRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWF 143
LL EM+ KG D+ YN++++ + +++A +L + + +CL N ++
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV-LKLL 393
Query: 144 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL-KHGKKTQAWALFDQMLDNHTPP 201
GR A + ++ + +R+F T T V++ L+ K GK +A F+ M+D PP
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 22/281 (7%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIV 80
I P + + ++++ CD+ V+ A E + FG PSA TY L +G+
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFG---KAKGFGIVPSAKTYSILVRGWARIRDAS 225
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
A + EML + D L YN L+ + G++D ++F E+ L D A ++
Sbjct: 226 GARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFI 285
Query: 141 EWFFNNGRDKEAMDSYKSLMDR--QFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+ + G + +YK ++DR ++ + P T N +++ L K+ K A+ L D+M+
Sbjct: 286 HAYCDAG---DVHSAYK-VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQ 341
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
P+ NS IM C H + K ++ + D YN ++
Sbjct: 342 KGANPDTWTYNS----IMAYHC-----DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
G A ++E + + P V T+ + +G
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 22/309 (7%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
K+ ++A LF ++ + P I Y ++I+ + +D A ++ + + P
Sbjct: 157 CKQPDQASLLFEVMLSE-GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDV 215
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
T+ L GR ++ EM G G ++ YN +I G+ + G ++ + +
Sbjct: 216 FTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLAD 275
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS---LMDRQFKMTPVTCNVLLEVLLK 180
+ E V + + NGR+ M+S+ S LM Q +T T N+L+ K
Sbjct: 276 MIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDIT--TFNILILSFGK 333
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTK 237
G + ++ D M F ++ + T+NI++ G+ + FRK G K
Sbjct: 334 AGMYKKMCSVMDFM-----EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK 388
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
NS Y ++++ + + GL+ + +++ ++ + + D P F C+ A G G
Sbjct: 389 PNS-------ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP-FFNCIINAYGQAG 440
Query: 298 PPTTATSKY 306
T Y
Sbjct: 441 DLATMKELY 449
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 28 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 87
V+YN VI T GR++ +++R + P+++TY L + AG +V+ +LR
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKM-KYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLR 415
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
+++N D+ +N +I+ + + G+L EL+ +++ER D + AT ++ + +G
Sbjct: 416 QIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVV 135
EA + EM N G D + Y+++IS + + G+L+K +LFD +K+ C+ VY+ VV
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 136 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQ 193
+A F + R+ M+ + + P VT N L++ L K K +A +FD+
Sbjct: 345 HALAKASFVSEARN------LMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
ML+ P + ++ + E + E LA RK G + + + M +
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGE-----EVFELLAKMRKMGCEPTVETYIM-------L 446
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
I + C L++E+ K++ PD+ ++ +
Sbjct: 447 IRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A +EA L + I PN+V+YN++I C + + A +++ ++ F P+
Sbjct: 349 KASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF-PT 407
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
TY H + G E +LL +M G Y LI + D L+D
Sbjct: 408 IRTY-HAFMRILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWD 464
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 165
E+KE+ + D + F NG+ +EA YK + D+ +
Sbjct: 465 EMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 40/272 (14%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
+I H R+D A E++ + + P Y + G+ + R+V+AL+L EM +
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPS-----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVR 95
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVVNATYMEWFFNNGRDKE 151
D + +N++ISG +E G+++ A +LFDE+ ER +V + +VN F +G+ +
Sbjct: 96 ----DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGC-----FRSGKVDQ 146
Query: 152 AMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
A +R F PV N ++ L+ GK A LF QM P ++
Sbjct: 147 A--------ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM------PGKNVIS 192
Query: 208 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS---RFCENGLLS 264
T +++ G+ + + KS S+ F + N + +GL+
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
+ L+EE S SL T +A G SR
Sbjct: 253 KLGFLYEEYVSASL----ITFYANCKRIGDSR 280
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 98/260 (37%), Gaps = 10/260 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ +YN +I+ C +G VD A+ L + + P+ TY L GF+ AGR+ EAL
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGN-RPNVFTYTILIDGFLIAGRVDEALK 271
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L M + + + G KA E+ E+ V +
Sbjct: 272 QLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLS 331
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
NN KE + + +R + T N + LLK + +FD + P F
Sbjct: 332 NNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN 391
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ ++V N +F E ++ G V YN +I C+ +
Sbjct: 392 G-----YLVLVQALLNAQRFSEGDRYLKQMGV----DGLLSSVYSYNAVIDCLCKARRIE 442
Query: 265 EAETLFEELCSKSLSPDVPT 284
A E+ + +SP++ T
Sbjct: 443 NAAMFLTEMQDRGISPNLVT 462
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A+R A A+F I PN+V++N ++ + G V + ++ F P
Sbjct: 437 KARRIENA-AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG-FKPD 494
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+T+ + A I +A D +EML G + + YN LI G+ D++ +LF
Sbjct: 495 VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++KE L D ++ F + K+A + K+++ K T + L++ L + G
Sbjct: 555 KMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Query: 183 KKTQAWALFDQMLDNHTPPN 202
++++A +F + + P+
Sbjct: 615 RESEAREMFSSIERHGCVPD 634
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 9/235 (3%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P Y L + ++A R E L++M G + YN +I + ++ A
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
E+++R + + V T++ + G K+ + L+ FK +T ++++ L +
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 240
+ A+ F +ML+ P N T+NI++ C + G ++ F K
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEP-----NEITYNILIRSCCSTGDTDRSVKLF----AKMKE 558
Query: 241 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
+ D+ YN I FC+ + +AE L + + L PD T+ + A S
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSES 613
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
S +Y + A RI A L EM ++G + + +N +SG+ G++ K + +
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
++L D + + + K+A D +K +++ + +T N+L+
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNS--DTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
G ++ LF +M +N P+ A N+ +F M + K E L T + G K
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRK----VKKAEELLKTMLRIGLKP- 598
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
D Y+ +I E+G SEA +F + PD
Sbjct: 599 ------DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 15/280 (5%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-----FGPSAVTYRHLTKGFI 74
+ I P++V+ +INT C RVD ALE++ + ++ + L G
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 75 SAGRIVEALDLLREM-LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
GR+ EA +LL M L + +++ YN LI G+ G L+ A E+ +KE + +
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V T + + A+ + + K VT L+ +A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
ML+ P ++ + +++ + + H+A+ K F++D+ YN +
Sbjct: 502 MLEAGCSP-----DAKIYYALISGLCQVRRDHDAIRVVEKL----KEGGFSLDLLAYNML 552
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
I FC+ + + ++ + PD T+ +S G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 22/301 (7%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
M R N A+ F + + N+V+Y +I+ C V+ A+ Y ++ A
Sbjct: 451 MCRHHGLNMAVVFF-MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCS 508
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P A Y L G R +A+ ++ ++ G D L YN LI F + N +K E+
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVL 178
++++ D + T + FF +D E+++ M R+ + P T +++
Sbjct: 569 LTDMEKEGKKPDSITYNTLIS-FFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAY 626
Query: 179 LKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
G+ +A LF M L + P N+ +NI++N LG F +AL+ +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNP-----NTVIYNILINAFSKLGNFGQALSL----KEE 677
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLF---EELCSKSLSPDVPTHFACVSAAGG 294
K +V YN + E ++ ETL +E+ +S P+ T + G
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEK---TQGETLLKLMDEMVEQSCEPNQITMEILMERLSG 734
Query: 295 S 295
S
Sbjct: 735 S 735
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 124/297 (41%), Gaps = 20/297 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGRVDVALELYRHIIATA 57
+++R +EA+ +F + N++ +N +I+ C GR+ A EL +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
P+AVTY L G+ AG++ A +++ M + + N ++ G L+ A
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
F ++++ + + V T + + ++AM Y+ +++ L+
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKA 234
L + + A + +++ + + A +N+++ + N K +E L K
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G K +S YN +IS F ++ E + E++ L P V T+ A + A
Sbjct: 576 GKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 23/288 (7%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EAI +++ I ++V+ N+V+ ++D EL++ ++ + F + R
Sbjct: 163 EAIEVYNVL-KDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESE-FDSERI--RC 218
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-- 126
L + G + E +LL++ L +G VY LISGF E+GN +E+ +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 127 ---RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+Y ++ M N + EA +K+L D+ + V ++ + G
Sbjct: 279 HFPSMYIYQKIIKGLCM-----NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
A L+ +M+ PN A +N+M++ F G+ A + + +
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFA-----YNVMIHGHFKRGEISLVEAFYNEM----LRNGY 384
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ N +I FC +G EA +F+ + ++P+ T+ A +
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKG 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 97/257 (37%), Gaps = 10/257 (3%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
+I CD G V EL + + P Y L GF G ++L M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQG-LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAW 277
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
H +Y +I G +A +F LK++ D VV T + F G A
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
+ ++ + + NV++ K G+ + A +++ML N + N+
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT---- 393
Query: 213 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
M+ + GK EA F+ + + YN +I FC+ + + L++E
Sbjct: 394 -MIKGFCSHGKSDEAFEIFKNM----SETGVTPNAITYNALIKGFCKENKVEKGLKLYKE 448
Query: 273 LCSKSLSPDVPTHFACV 289
L + L P + A V
Sbjct: 449 LKALGLKPSGMAYAALV 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 16 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 75
F + + PN +YN +I+ H G + + Y ++ +G + ++ + KGF S
Sbjct: 342 FEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG-YGGTMLSCNTMIKGFCS 400
Query: 76 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 135
G+ EA ++ + M G +++ YN LI GF + ++K +L+ ELK L G+
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMA 460
Query: 136 NA 137
A
Sbjct: 461 YA 462
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ V Y +I C++G + A +L+ +I P+ Y + G G I
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG-MRPNEFAYNVMIHGHFKRGEISLVEA 374
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
EML G+G L N +I GF G D+A E+F + E + + + ++ F
Sbjct: 375 FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Query: 145 NNGRDKEAMDSYKSL 159
+ ++ + YK L
Sbjct: 435 KENKVEKGLKLYKEL 449
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y L + + A A+ +M G ++ +N L++ L N DK +LFDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 126 ERC--LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+R ++ D + ++ + ++G ++A++ + + + ++T + +L L K G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
A L+++M+ + A N IM + + + E + G K
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN---VRIMSAQKESPERVKELIEEMSSMGLKP----- 276
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
D YN +++ +CE G+L EA+ ++E L + +P+ T
Sbjct: 277 --DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAAT 315
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 4 AKRYNEAIALFHFFFTQSN-IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+K +++ LF + N I+P+ +SY +I ++CD G + A+E+ R + +
Sbjct: 150 SKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKG-MEVT 208
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN-NLISGFLELGNLDKANELF 121
+ + + G + A +L EM+ KG D+ YN ++S E + ++ EL
Sbjct: 209 TIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKE--SPERVKELI 266
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
+E+ L D + M + G EA Y+ L T L+ L
Sbjct: 267 EEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYS 326
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 217
Q +A+F + + H P+F + ++ N+
Sbjct: 327 RLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENK 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT-APFGP 61
+A +N A+ F Q + VS+N ++N D +L+ I P
Sbjct: 114 QASMFNHAMRTFEQM-DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIP 172
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
++Y L K + +G +A++++R+M KG ++ + ++S + G L+ A+ L+
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 122 DEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ----FKMTPVTCNVLLE 176
+E+ K+ C + + N M KE+ + K L++ K ++ N L+
Sbjct: 233 NEMVKKGCELDNAAYNVRIM------SAQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 177 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 234
+ G +A +++ + N+ PN + F++ + + G A F+K+
Sbjct: 287 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG-----YAIFKKS 339
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
F + N+ + V+YN VI D+G +++A L + + + P +TY + G+ +AG
Sbjct: 156 FPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLY-PDVITYTSMINGYCNAG 214
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER----CLVYDG 133
+I +A L +EM +S+ Y+ ++ G + G++++A EL E+++ + +
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNA 274
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA-LFD 192
V ++ F R +EA+ + +R VT VL++ +L++ + +A + L D
Sbjct: 275 VTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID 334
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 232
+++ + +S T +++ + ++ EA FR
Sbjct: 335 KLVKLGGVSLSECFSSATVSLI-----RMKRWEEAEKIFR 369
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 67
N+A+ +FH + PN +Y+ +I+ C +GR A EL + F P+ +Y
Sbjct: 305 NDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG-FVPNGKSYN 363
Query: 68 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
L F +G I +A+ L EM+ G D + Y L+ G D+A L + L+E+
Sbjct: 364 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 128 CLV----YDGVVNATYME 141
LV YD +VN + +
Sbjct: 424 QLVDRDSYDKLVNVLHKD 441
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
Y E + S I P++ + N ++ + V+ AL ++ + P++ TY
Sbjct: 268 YMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTY 327
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+L G + GR + A +LL EM KG + YN+L++ F G +D A + E+ E
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 164
V D + T ++ G+ EA + L ++Q
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 144/316 (45%), Gaps = 30/316 (9%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++ RY +A+ +F F + +VPN V+ + ++ ++ E++ I F
Sbjct: 328 IHNGMRY-QALDMFRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGSEVH-SIAVKMGFI 384
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
+ L + G++ +A + + NK D +N++I+G+ + G KA EL
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL-MDRQFKMTPVTCNVLLEVLL 179
F +++ L + + T + + NG + EAMD ++ + D + + T N+++ +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNS---DTFNI----MVNE---CF---NLGKFH- 225
++GKK +A LF +M + PN + S N+ MV E C NL H
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA 560
Query: 226 --EALA-TFRKAGTKSNSKAFAM-----DVAGYNNIISRFCENGLLSEAETLFEELCSKS 277
AL T+ K+G S+ + D+ +N++I + +G A LF ++ ++
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 278 LSPDVPTHFACVSAAG 293
++P+ T + + A G
Sbjct: 621 ITPNRGTLSSIILAHG 636
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 128/307 (41%), Gaps = 48/307 (15%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
+++++N+V+ +C G+ + A+EL + + P VT+ L G+ G+ A+DL
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKE-MEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-----------------KERC 128
+++M G AD + +ISG + G +A ++F ++ C
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 129 L------------------VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 170
L + D +V + ++ + G+ ++A + S+ ++ T
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YT 420
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
N ++ + G +A+ LF +M D + PN T+N M++ G EA+
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNII-----TWNTMISGYIKNGDEGEAMDL 475
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVS 290
F++ + A +N II+ + +NG EA LF ++ P+ T + +
Sbjct: 476 FQRM---EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 291 AAGGSRG 297
A G
Sbjct: 533 ACANLLG 539
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA + H + + + N+++ + G +D A + +R + + +
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-----DVIAWNS 252
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
+ + G+ EA++L++EM +G + +N LI G+ +LG D A +L +++
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM------DRQFKMTPVTCNVLLEVLLKHG 182
+ D + +NG +A+D ++ + + M+ V+ L+V + G
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV-INQG 371
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+ + A+ +D+ + ++ M ++C GK +A F K
Sbjct: 372 SEVHSIAVKMGFIDD-------VLVGNSLVDMYSKC---GKLEDARKVFDSVKNK----- 416
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV +N++I+ +C+ G +A LF + +L P++ T +S
Sbjct: 417 ---DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 23/272 (8%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PN + ++ C G V A ++ +I + S + L GF +G +A+D
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSG-ISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L +M+ G + + Y +LI GF++LG +D+A + +++ L D V+ + +
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
GR +EA + SL R+ T +L L GK FD + P
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK-------FDLV-----PRITH 376
Query: 205 AVNSD----TFNIMVNECFN-LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
+ +D T N++ N CF+ +G AL K + + K FA+D Y +S C
Sbjct: 377 GIGTDFDLVTGNLLSN-CFSKIGYNSYAL----KVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 260 NGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G A +++ + + D H A + +
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 115/283 (40%), Gaps = 47/283 (16%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGR-VDVALELYRHIIATAPFGP 61
+ K+ EA + + + P+ V+YN + + +G V E+ ++ P
Sbjct: 200 KKKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
+ T + G+ GR+ + L +R M A+ +V+N+LI+GF+E+ + D +E+
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVL 318
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
+KE + D + +T M + + G ++A +K ++ K ++L + ++
Sbjct: 319 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 241
+ +A L + ++ P
Sbjct: 379 KEPKKAEELLETLIVESRP----------------------------------------- 397
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+V + +IS +C NG + +A +F ++C +SP++ T
Sbjct: 398 ----NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 11/275 (4%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA L T+ + P+ +YN ++ C + V E + P V+
Sbjct: 174 RVDEAKDLMKEL-TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ L ++ + EA+ L+ ++ N G D +YN ++ GF L +A ++ ++K
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
E + D + T + GR +EA K+++D ++ T L+ + + G+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 186 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 245
A +L ++M PN N+ + + G E + +G K +
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG--MELYEMMKSSGVK-------L 403
Query: 246 DVAGYNNIISRFCENGLLSEAETLFE-ELCSKSLS 279
+ GY ++ ++G ++EA +F+ + SKSLS
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS 438
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 8 NEAIALF-HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA-LELYRHIIATAPFGPSAVT 65
N+ + LF H +Q N P ++ +++ C ++ + +++ P VT
Sbjct: 102 NDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVT 161
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ GR+ EA DL++E+ K D+ YN L+ + +L E DE++
Sbjct: 162 TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR 221
Query: 126 ERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ V +V+ T + + N+ +EAM L + FK N +++ K
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSK 241
++A ++ +M + P + T+N ++ G+ EA L T AG
Sbjct: 282 SEAVGVYKKMKEEGVEP-----DQITYNTLIFGLSKAGRVEEARMYLKTMVDAG------ 330
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+ D A Y ++++ C G A +L EE+ ++ +P+
Sbjct: 331 -YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
++ AKR+ + I S P++VSY +IN +G++ A+ELYR + T
Sbjct: 263 VHEAKRFWKDI-------IASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR-N 314
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P ++ RI EAL++ RE+ KG + + YN+L+ ++ +K EL
Sbjct: 315 PDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
Query: 121 FDELKER---CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
+E++ + C D V +Y+ + +D + + + + + +MT N++ +
Sbjct: 375 VEEMELKGGSCSPND--VTFSYLLKYSQRSKDVDIV--LERMAKNKCEMTSDLYNLMFRL 430
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
++ K+ + ++ +M + P + T+ I ++ GK EAL+ F++ +K
Sbjct: 431 YVQWDKEEKVREIWSEMERSGLGP-----DQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 485
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 114/264 (43%), Gaps = 17/264 (6%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
+I + N ++N C G V A ++ IIA+ P V+Y + G++ +A++L
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASK-CRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
R M + D + NN+I + +A E+F E+ E+ + V + ++
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
R ++ + + + + +P +V LLK+ ++++ D +L+ N
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSP--NDVTFSYLLKYSQRSKD---VDIVLE-RMAKNKCE 418
Query: 206 VNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ SD +N+M + K E + ++G + + + + + G + G
Sbjct: 419 MTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT-------KGK 471
Query: 263 LSEAETLFEELCSKSLSPDVPTHF 286
+ EA + F+E+ SK + P+ T
Sbjct: 472 IGEALSYFQEMMSKGMVPEPRTEM 495
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 12/230 (5%)
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
S Y + + S GR EA ++ + M N G+ D++ Y+ L+ G + L++A +
Sbjct: 369 SKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVL 428
Query: 122 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
D+++ + D ++ N +A+ + +++++ F + +VL++ + H
Sbjct: 429 DQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIH 488
Query: 182 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 241
K A +M+ N +Q+ T+ +++++ + K EAL + K N
Sbjct: 489 NKFEGASIFLMEMVKNANVKPWQS----TYKLLIDKLLKIKKSEEALDLLQMM-KKQNYP 543
Query: 242 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
A+A GY +++F G L +A+ + L SK SP +F + A
Sbjct: 544 AYAEAFDGY---LAKF---GTLEDAKKFLDVLSSKD-SPSFAAYFHVIEA 586
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 51/319 (15%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
AK ++A+ ++ +S + N+ N++++ G++D ++L+ + P
Sbjct: 144 AKNVSKALEIYQSIPDESTKI-NVYICNSILSCLVKNGKLDSCIKLFDQMKRDG-LKPDV 201
Query: 64 VTYRHLTKGFI------------------------------------SAGRIVEALDLLR 87
VTY L G I S GR EA + ++
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
+M +GH + Y++L++ + G+ KA+EL E+K LV + V+ T ++ + G
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 207
+ + L + + +L++ L K GK +A ++FD M + V
Sbjct: 322 LFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM-------KGKGVR 374
Query: 208 SDTF--NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
SD + +IM++ +F EA R + T D+ N ++ +C G +
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEK----CDLVMLNTMLCAYCRAGEMES 430
Query: 266 AETLFEELCSKSLSPDVPT 284
+ +++ +++SPD T
Sbjct: 431 VMRMMKKMDEQAVSPDYNT 449
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
PNI Y++++N++ +G A EL + + P+ V L K +I G + +
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG-LVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
LL E+ + G+ + + Y L+ G + G L++A +FD++K + + DG N+ +
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+ R KEA + + K V N +L + G+ + +M + P++
Sbjct: 389 RSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY- 447
Query: 205 AVNSDTFNIMVN 216
+TF+I++
Sbjct: 448 ----NTFHILIK 455
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 117/288 (40%), Gaps = 11/288 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ + +R++EA A S P+ S + V++ C++ R A + + G
Sbjct: 141 LVKLRRFDEARAHLDRIIA-SGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGS-G 198
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL-VYNNLISGFLELGNLDKANE 119
+ L KG G + EA+ +L + + +Y +L F + G +A
Sbjct: 199 LWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEA 258
Query: 120 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
LFD ++ D V+ M+ + + AM Y +++R F++ P N L+ +
Sbjct: 259 LFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFM 318
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
K G + +F QM+ N T++IM+ G AL F +
Sbjct: 319 KLGMLDKGRVMFSQMIKKGVQSNVF-----TYHIMIGSYCKEGNVDYALRLFV---NNTG 370
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFA 287
S+ + +V Y N+I F + G + +A L + + PD T+F
Sbjct: 371 SEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 33/307 (10%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTY 66
E +A + + VP++ +Y V+N C + D A + I A G P+ Y
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI---IDAMEELGLRPTVAIY 585
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+ GR+VEA + +ML G D + Y +I+ + G +D+ANEL +E+ +
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
L + F G ++ +++ V L+ LK G
Sbjct: 646 HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKF 705
Query: 187 AWALFDQMLDN---HTPPNFQAVNSDTFNIMVNE-----CFNLGKFH--------EALAT 230
++ LF M +N H + + S + M + GK + L +
Sbjct: 706 SFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVS 765
Query: 231 FRKAGTKSNSKAFAMDVAG------------YNNIISRFCENGLLSEAETLFEELCSKSL 278
+ SK+FAM+V G +N II+ +C G L EA E + + +
Sbjct: 766 IPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGI 825
Query: 279 SPDVPTH 285
P++ T+
Sbjct: 826 VPNLVTY 832
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 119/308 (38%), Gaps = 35/308 (11%)
Query: 9 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 68
EA ALF V ++ Y ++ +C + + +A+ LY ++ + F +
Sbjct: 255 EAEALFDHMEVDGYYVDKVM-YTCLMKEYCKDNNMTMAMRLYLRMVERS-FELDPCIFNT 312
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF------D 122
L GF+ G + + + +M+ KG ++ Y+ +I + + GN+D A LF +
Sbjct: 313 LIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ Y ++ F+ G +A+D ++D +T VLL++L K
Sbjct: 373 DISRNVHCYTNLIFG-----FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
+ A + +LDN N ++ D NI V LG+ A G + A
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVID-DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTA 486
Query: 243 FAMD---VAG------------------YNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
+A YN++I + ++ + +L + PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 282 VPTHFACV 289
V T+ V
Sbjct: 547 VDTYLIVV 554
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 38/293 (12%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ + N+ +Y+ +I ++C EG VD AL L+ + + + Y +L GF G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE-LKERCLVYDGVVN 136
+ +A+DLL ML+ G D + Y L+ + L A + L C + V++
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 137 -----ATYMEWFFNNGRDKEA----------------MDSYKSLMDRQFKMTPVTC---- 171
+E K+A +Y + + R KM + C
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 172 ---NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 228
N +++ L + +L + + + P+ DT+ I+VNE L K ++
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDV-----DTYLIVVNE---LCKKNDRD 564
Query: 229 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
A F VA Y++II + G + EAE F ++ + PD
Sbjct: 565 AAFAIIDAMEEL-GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPD 616
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
Q + P+ + N VIN C GRVD A+++ ++ P AVT + G ++ GR
Sbjct: 440 QGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRA 499
Query: 80 VEALDLLREMLNKGHGADSLV-YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 138
EALD+L ++ + +V YN +I G +L D+A +F +L++ + D A
Sbjct: 500 EEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAI 559
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
++ + A + ++ + L+ L + G + A + D+
Sbjct: 560 IIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 199 TPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNS 240
PN +N ++ EC G EA L RK G ++
Sbjct: 620 AIPNVVC-----YNTVIAECSRSGLKREAYQILEEMRKNGQAPDA 659
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 13/250 (5%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R N A + + P SYN +I+ C +G A +L + F PS T
Sbjct: 321 RRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG-SEFEFFPSEYT 379
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN-LDKANELFDEL 124
Y+ L + +A ++L ML K + +YN + G + N + N L L
Sbjct: 380 YKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSML 439
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF-KMTPVTCNVLLEVLLKHGK 183
+ C + +N T + GR +AM +M +F VT N ++ LL G+
Sbjct: 440 QGDCRPDEYTLN-TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 184 KTQAWALFDQML-DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSN 239
+A + ++++ +N P A +N ++ F L K EA++ F KA ++
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVA-----YNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 240 SKAFAMDVAG 249
S +A+ + G
Sbjct: 554 STTYAIIIDG 563
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 28/281 (9%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC-DEGRVDVALELYRHIIATAPFGPS 62
A R++EA F F S +P+ + N +I V ++R I F PS
Sbjct: 103 AGRFDEAHRRF-LLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPS 161
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
Y L + R+++A L+ +M N+GH D + + LI G+ E+ L+ A+++FD
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
E++ C + + + + F RD E + + LM L E +
Sbjct: 222 EMRV-CGIRPNSLTLSVLIGGFLKMRDVE---TGRKLMKE-----------LWEYMKNET 266
Query: 183 KKTQAWALFDQMLDNHTPPN-----FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
+ A F ++D+ F+ + + VN F G ++L +R+
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 238 S------NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 272
+ SK YN II C++G A L EE
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R ++A+ + T P+ V+ N V+ +GR + AL++ ++ P V
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y + +G + EA+ + ++ ADS Y +I G +D A + +D++
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 126 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 185
+D V A +++ +G +A L D V N ++ + G K
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 186 QAWALFDQMLDNHTPPN 202
+A+ + ++M N P+
Sbjct: 642 EAYQILEEMRKNGQAPD 658
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 29 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 88
+Y +I + GR+D A +L++ + PS + L AGR+ ++ + E
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQM-KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
M GH + ++ +LI + + G LD A L+DE+K+ + + +E +G+
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+ AM +K + F TP T + LLE+ G+ A +++ M + P +
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 120/324 (37%), Gaps = 38/324 (11%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
VPN+V + + VD AL L+R + PS Y L G V
Sbjct: 167 QFVPNMVHITQSLKIVKE---VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVG 223
Query: 82 ALDLLREML--NKGHGADSL-VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 138
L EM+ + HG S YN +I + L+ A F + +E D
Sbjct: 224 IQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNN 283
Query: 139 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
M F N G +A + Y+S+ + T +++ L K G+ A+ LF QM +
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 199 TPPNFQAVNS-----------DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 247
P+F +S DT + E G H AT + S +KA +D
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG--HRPSATMFVSLIDSYAKAGKLDT 401
Query: 248 A-----------------GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVS 290
A Y II ++G L A T+F+++ P P+ ++C+
Sbjct: 402 ALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP-TPSTYSCLL 460
Query: 291 AAGGSRGPPTTATSKYWNASTFMG 314
G +A K +N+ T G
Sbjct: 461 EMHAGSGQVDSAM-KIYNSMTNAG 483
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 16/271 (5%)
Query: 29 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 88
+YN VI +++VA ++ + TY +L F++ G +A ++
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESG-CKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
M D Y +I + G LD A +LF ++KER L V ++ ++ GR
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
+M Y + + + L++ K GK A L+D+M + PNF
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNF----- 418
Query: 209 DTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
+ +++ GK A+ F+ KAG F + Y+ ++ +G +
Sbjct: 419 GLYTMIIESHAKSGKLEVAMTVFKDMEKAG-------FLPTPSTYSCLLEMHAGSGQVDS 471
Query: 266 AETLFEELCSKSLSPDVPTHFACVSAAGGSR 296
A ++ + + L P + ++ + ++ R
Sbjct: 472 AMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 111/289 (38%), Gaps = 38/289 (13%)
Query: 27 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 86
I SYN++ GR +A + +++ P+ TY + GF + R+ AL
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEG-VEPTRHTYNLMLWGFFLSLRLETALRFF 278
Query: 87 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 146
+M +G D +N +I+GF +D+A +LF E+K + V T ++ +
Sbjct: 279 EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAV 338
Query: 147 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN---- 202
R + + ++ + + T + LL L GK +A + M+ H P
Sbjct: 339 DRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI 398
Query: 203 ------FQAVNSD------------TFNI----------MVNECFNLGKFHEALATF--- 231
Q+ D T N+ + N+C ++ A+
Sbjct: 399 FLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC-KASAYNRAIKLLDTL 457
Query: 232 -RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 279
K + M+ + YN II C NG ++AE LF +L + +
Sbjct: 458 IEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 97 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 156
D + +I E+ L+ A + ++ E+ + +D + +E + G +E++ +
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 157 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 216
+ + D + T + N L +V+L+ G+ A F++M+ P T+N+M+
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRH-----TYNLMLW 263
Query: 217 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 276
F + AL F T+ + D A +N +I+ FC + EAE LF E+
Sbjct: 264 GFFLSLRLETALRFFEDMKTR----GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 277 SLSPDVPTHFACVSA 291
+ P V ++ +
Sbjct: 320 KIGPSVVSYTTMIKG 334
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 113/285 (39%), Gaps = 28/285 (9%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
FH + V N N +I H + G + +A EL+ V + +T G+
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELF-----DDSAKAHKVAWSSMTSGY 188
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
G+I EA+ L EM K D + +N +I+G L+ +D A ELFD E+ D
Sbjct: 189 AKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEK----DV 240
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V + + N G KEA+ +K + D VT LL G L
Sbjct: 241 VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
+L+ + + V + +N +++ G A+ FR G K D++ +N +
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR--GVKDR------DLSTWNTL 352
Query: 254 ISRFCENGLLSEAE---TLFEELCSKSLSPDVPTHFACVSAAGGS 295
I L AE +FEE+ + P+ T + A S
Sbjct: 353 IVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+A ++AI +FH T + V I S N +IN D G ++ A + P+
Sbjct: 128 KAGSVDKAIDVFHKI-TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA-KDMRLRPN 185
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
+V++ L KGF+ A + EML + YN+LI ++ KA L +
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
++ ++ + + V M+ G EA + R K V +L+ L K G
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN----ECFNLGKFHEALATFRKAGTKS 238
+ +A L +M P+ +NI+VN EC + + + L + G K
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVV-----IYNILVNHLCTEC-RVPEAYRVLTEMQMKGCKP 359
Query: 239 NSKAFAMDVAGYNNI 253
N+ + M + G+ I
Sbjct: 360 NAATYRMMIDGFCRI 374
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
EAL L + G D Y++LI + N D +++ ++ R + + +
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ + G +A+D + + T + N L+ VL+ +G+ +A + FD D
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
PN S +FNI++ + + A F + + V YN++I C N
Sbjct: 184 PN-----SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS----VVTYNSLIGFLCRN 234
Query: 261 GLLSEAETLFEELCSKSLSPDVPT 284
+ +A++L E++ K + P+ T
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVT 258
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 27/193 (13%)
Query: 65 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
TY + F AGRI + M KG D++ Y +LI G++D A L++E+
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
++ V YM+ F +GR +EA + YK ++ + T VL+E L+ GK
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK--------------------- 223
+A +F +M + P+ A NI++ + G+
Sbjct: 244 EEALDIFFKMQEIGVQPDKAAC-----NILIAKALKFGETSFMTRVLVYMKENGVVLRYP 298
Query: 224 -FHEALATFRKAG 235
F EAL T + AG
Sbjct: 299 IFVEALETLKAAG 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 92 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 151
KG D Y ++ F E G + +F +KE+ ++ D V + + W ++G
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 152 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 211
AM ++ + D + T V+ +++L G+ +A ++ +ML + PN T+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH-----TY 230
Query: 212 NIMVNECFNLGKFHEALATFRK 233
+++ GK EAL F K
Sbjct: 231 TVLMEYLVATGKCEEALDIFFK 252
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 50/243 (20%)
Query: 73 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
++ GR EAL + + M S+ YN +ISG+L G + A +LFDE+ ER LV
Sbjct: 74 YMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 133 GVVNATYMEWFFNNGRDKE------------------------AMDSYKSLMDRQFKMTP 168
V+ Y+ N G+ +E +D +S+ DR +
Sbjct: 130 NVMIKGYVR-NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 169 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 228
V+ N LL +++ K +A LF + N+ V ++N ++ K EA
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLF------KSRENWALV---SWNCLLGGFVKKKKIVEAR 239
Query: 229 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFAC 288
F + DV +N II+ + ++G + EA LF+E S DV T A
Sbjct: 240 QFFDSMNVR--------DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAM 287
Query: 289 VSA 291
VS
Sbjct: 288 VSG 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 50/302 (16%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
FF N V ++VS+N +I + G++D A +L+ F T+ + G+I
Sbjct: 241 FFDSMN-VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF-----TWTAMVSGYIQN 294
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
+ EA RE+ +K + + +N +++G+++ ++ A ELFD + R + +
Sbjct: 295 RMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
Y + G+ EA K+L D+ K PV+ ++ + G +A LF QM
Sbjct: 351 TGYAQ----CGKISEA----KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM-- 400
Query: 197 NHTPPNFQAVNSDTFNIMVNEC-----FNLGK-FHEALAT----------------FRKA 234
+N +F+ ++ C LGK H L + K
Sbjct: 401 ---EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 235 GTKSNSKAFAMDVAG-----YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACV 289
G+ + ++AG +N +I+ + +G A FE + + L PD T A +
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 290 SA 291
SA
Sbjct: 518 SA 519
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 11/266 (4%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
YNN++++ G V+ LY ++ P T+ L G+ G +VEA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
+ G D Y + I+G +D A ++F E+ + + V + F +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 209
EA+ + D T VL++ L G+K++A LF QM ++ P+ D
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD------D 295
Query: 210 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 269
++ + F G + + + ++ +V YN +I FC+ + +A L
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLEN---GLMPNVITYNALIKGFCKKN-VHKAMGL 351
Query: 270 FEELCSKSLSPDVPTHFACVSAAGGS 295
++ ++L PD+ T+ ++ S
Sbjct: 352 LSKMLEQNLVPDLITYNTLIAGQCSS 377
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 6 RYNEAIALFHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
R E A F F TQ+ N VSY +I + ++D AL L + P+
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCPNV 260
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
TY L +G+ EA++L ++M G D +Y LI F LD+A+ L +
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ E L+ + + ++ F K AM ++++ +T N L+ G
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 184 KTQAWALFDQMLDNHTPPNFQAV 206
A+ L M ++ PN + V
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRTV 402
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++VS+N++I+ + G + ++Y+ ++A + F P+ VT + + + ++ L++
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
++M+ D + N +I + + G+LD A LFDE+ E+ V G + + YM
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA---- 312
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
+G KEAM +L + T N ++ L+++ + F +M+ + PN
Sbjct: 313 HGLVKEAM----ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVT 368
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
++S ++ + GK A A + G +N + +II + + G L
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAI--RNGADNN-------IYVTTSIIDNYAKLGFLLG 419
Query: 266 AETLFEELCSKSL 278
A+ +F+ +SL
Sbjct: 420 AQRVFDNCKDRSL 432
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 20/265 (7%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ + +++ C G V A +++ + F P+ + L G+ G+++EA +
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDM--REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNATY 139
+L +M G D +V+ NL+SG+ G + A +L +++++R Y ++ A
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
R EAM + + + VT L+ K G + +++ D M
Sbjct: 318 R----TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ IMV +F E L K + D+ YN +I C+
Sbjct: 374 MPS----QVTYMQIMVAH-EKKEQFEECLELIEKM----KRRGCHPDLLIYNVVIRLACK 424
Query: 260 NGLLSEAETLFEELCSKSLSPDVPT 284
G + EA L+ E+ + LSP V T
Sbjct: 425 LGEVKEAVRLWNEMEANGLSPGVDT 449
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 120/318 (37%), Gaps = 40/318 (12%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++ ++ + + +F + Q +P+ Y+ +I+ +G+ +A+ L+ + + P
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPD 167
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS-----LVYNNLISGFLELGNLDKA 117
A Y L + +AL+ +R L+K G + + YN L+ F + G +D+
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
N LF +L + D M+ + NG KE + + K +T NVL++
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN------------------------- 212
K + + F ++ + P NS N
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPS 347
Query: 213 IMVNECFNL-----GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
+ EC + G A F + G + + N ++ +C NGL EA+
Sbjct: 348 FITYECMIMMYGYCGSVSRAREIFEEVGESDR----VLKASTLNAMLEVYCRNGLYIEAD 403
Query: 268 TLFEELCSKSLSPDVPTH 285
LF + + PD T+
Sbjct: 404 KLFHNASAFRVHPDASTY 421
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 45/316 (14%)
Query: 4 AKRYNEAI--ALFHFFFTQSNIVPNIVSYNNVINT-HC-----DEGRVD---VALELYRH 52
A+R N + +L + +V + Y V+ HC + G+ D LE++R
Sbjct: 63 AERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRW 122
Query: 53 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 112
+ + P Y L G+ A+ L EM N G D+ VYN LI+ L
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 113 N----LDKANELFDELK--ERC----LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 162
+ L+K D++K ERC + Y+ ++ A F +G+ + +K L
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRA-----FAQSGKVDQVNALFKDL--- 234
Query: 163 QFKMTPVTCNV-----LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 217
M+PV+ +V +++ K+G + A+ +M N P+ TFN++++
Sbjct: 235 --DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII-----TFNVLIDS 287
Query: 218 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 277
+F + TF K+ +S K + +N++I + + ++ +AE +F+++ +
Sbjct: 288 YGKKQEFEKMEQTF-KSLMRSKEKP---TLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 278 LSPDVPTHFACVSAAG 293
P T+ + G
Sbjct: 344 YIPSFITYECMIMMYG 359
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R R +EA +F + N+V++ +I + RVDVA R + P +
Sbjct: 184 REGRVDEARLIFDEMRER-----NVVTWTTMITGYRQNNRVDVA----RKLFEVMP-EKT 233
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V++ + G+ +GRI +A + M K + N +I GF E+G + KA +FD
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFD 289
Query: 123 ELKER-CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL--- 178
+++R + G++ A + G + EA+D + + + + + + +L V
Sbjct: 290 LMEDRDNATWRGMIKA-----YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344
Query: 179 --LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
L++G++ A + Q D+ + M +C G+ +A F + +
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDD-------VYVASVLMTMYVKC---GELVKAKLVFDRFSS 394
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
K D+ +N+IIS + +GL EA +F E+ S P+ T A ++A
Sbjct: 395 K--------DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVV 135
G+I EA + K G+ +N+++SG+ G +A +LFDE+ ER +V ++G+V
Sbjct: 31 GKINEARKFFDSLQFKAIGS----WNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLV 86
Query: 136 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
+ + N EA + ++ + +R V+ +++ ++ G +A +LF +M
Sbjct: 87 SG-----YIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 255
+ N ++ +M + G+ +A + K DV N+I
Sbjct: 138 ER---------NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--------DVVASTNMIG 180
Query: 256 RFCENGLLSEAETLFEELCSKSL 278
C G + EA +F+E+ +++
Sbjct: 181 GLCREGRVDEARLIFDEMRERNV 203
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 111/277 (40%), Gaps = 45/277 (16%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ P++V++N + + G A ++ + P+ T + G+ G++ EA
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
L M G + V+N+LI GFL + ++D E+ D ++E + D V +T M
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+ + G K + Y +++ ++L + + G+ +A + +QM
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM-------- 662
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
RK G + N V Y IIS +C G
Sbjct: 663 -----------------------------RKFGVRPN-------VVIYTQIISGWCSAGE 686
Query: 263 LSEAETLFEELCS-KSLSPDVPTHFACVSAAGGSRGP 298
+ +A +++++C LSP++ T+ + G ++ P
Sbjct: 687 MKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 10/258 (3%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++ S ++N + GR A ++ +I PS +TY L L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEG-HKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
+ ++ G D++++N +I+ E GNLD+A ++F+++KE T ++ +
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 146 NGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
G+ +E+ ++ D + TCN+L++ K +AW + +M P+
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
TFN + +G A + K +V I++ +CE G +
Sbjct: 497 -----TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKP---NVRTCGTIVNGYCEEGKME 548
Query: 265 EAETLFEELCSKSLSPDV 282
EA F + + P++
Sbjct: 549 EALRFFYRMKELGVHPNL 566
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 45/249 (18%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
++PN SYN ++ C + +A +L+ ++ P +Y+ L +GF G++ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-PDVDSYKILIQGFCRKGQVNGA 244
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
++LL +MLNKG D L Y L++ L +A +L +K + D V T +
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
F R+ AMD+ K L D ML N P
Sbjct: 305 F---CREDRAMDARKVL--------------------------------DDMLSNGCSP- 328
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
NS ++ ++ + G F E +K + SK F+ + N ++ FC G
Sbjct: 329 ----NSVSYRTLIGGLCDQGMFDEG----KKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Query: 263 LSEAETLFE 271
+ EA + E
Sbjct: 381 VEEACDVVE 389
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ ++VP++ SY +I C +G+V+ A+EL ++ F P ++Y L ++
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQL 276
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA LL M KG D + YN +I GF A ++ D++ + V T
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + G E + ++ + F N L++ GK +A + + ++ N
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG- 395
Query: 200 PPNFQAVNSDTFNIMV 215
+ ++SDT+ +++
Sbjct: 396 ----ETLHSDTWEMVI 407
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R + N A+ L + VP+ +SY ++N+ C + ++ A +L + P
Sbjct: 237 RKGQVNGAMELLDDMLNK-GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG-CNPD 294
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V Y + GF R ++A +L +ML+ G +S+ Y LI G + G D+ + +
Sbjct: 295 LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM--------DRQFKMTPVTCN 172
E+ + V+ ++ F + G+ +EA D + +M D + P+ CN
Sbjct: 355 EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
G + +A +L + G ++ YN L+ F +L A +LF ++ ER +V D
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
++ F G+ AM+ ++++ F ++ LL L + + +A+ L +M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM-- 286
Query: 197 NHTPPNFQAVNSDT--FNIMVNECFNLGKFHEALAT-FRKAGTKSNSKAFAMDVAGYNNI 253
+ N D +N M+ LG E A RK S + + Y +
Sbjct: 287 -----KLKGCNPDLVHYNTMI-----LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFA 287
I C+ G+ E + EE+ SK SP HF+
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSP----HFS 366
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 120/318 (37%), Gaps = 40/318 (12%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
++ ++ + + +F + Q +P+ Y+ +I+ +G+ +A+ L+ + + P
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPD 167
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS-----LVYNNLISGFLELGNLDKA 117
A Y L + +AL+ +R L+K G + + YN L+ F + G +D+
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
N LF +L + D M+ + NG KE + + K +T NVL++
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN------------------------- 212
K + + F ++ + P NS N
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPS 347
Query: 213 IMVNECFNL-----GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 267
+ EC + G A F + G + + N ++ +C NGL EA+
Sbjct: 348 FITYECMIMMYGYCGSVSRAREIFEEVGESDR----VLKASTLNAMLEVYCRNGLYIEAD 403
Query: 268 TLFEELCSKSLSPDVPTH 285
LF + + PD T+
Sbjct: 404 KLFHNASAFRVHPDASTY 421
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 45/316 (14%)
Query: 4 AKRYNEAI--ALFHFFFTQSNIVPNIVSYNNVINT-HC-----DEGRVD---VALELYRH 52
A+R N + +L + +V + Y V+ HC + G+ D LE++R
Sbjct: 63 AERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRW 122
Query: 53 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 112
+ + P Y L G+ A+ L EM N G D+ VYN LI+ L
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 113 N----LDKANELFDELK--ERC----LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 162
+ L+K D++K ERC + Y+ ++ A F +G+ + +K L
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRA-----FAQSGKVDQVNALFKDL--- 234
Query: 163 QFKMTPVTCNV-----LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 217
M+PV+ +V +++ K+G + A+ +M N P+ TFN++++
Sbjct: 235 --DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII-----TFNVLIDS 287
Query: 218 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 277
+F + TF K+ +S K + +N++I + + ++ +AE +F+++ +
Sbjct: 288 YGKKQEFEKMEQTF-KSLMRSKEKP---TLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 278 LSPDVPTHFACVSAAG 293
P T+ + G
Sbjct: 344 YIPSFITYECMIMMYG 359
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIVEAL 83
+I +N++I++ G ++ AL Y ++ FG P T+ L K + A + + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLC---FGVSPDVSTFPCLVKACV-ALKNFKGI 157
Query: 84 DLLREMLNK-GHGADSLVYNNLISGFLELGNLDKANELFDE-LKERCLVYDGVVNATYME 141
D L + ++ G + V ++LI +LE G +D ++LFD L++ C++++ ++N
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG---- 213
Query: 142 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV-----LLKHGKKTQAWALFDQMLD 196
+ G + + + Q VT + +L V L+ G + + +
Sbjct: 214 -YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV-- 270
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
+F+ ++ M ++C G+F +A FR S+A D +N +IS
Sbjct: 271 -----DFEGSIKNSLLSMYSKC---GRFDDASKLFRMM-----SRA---DTVTWNCMISG 314
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPT 284
+ ++GL+ E+ T F E+ S + PD T
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAIT 342
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 18/279 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK EA LF + PN+++Y ++N C + A ++ +I P
Sbjct: 276 RAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQG-LKPD 332
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V + + +G + + + +A+ L M +KG + Y +I F + +++ A E FD
Sbjct: 333 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP---VTCNVLLEVLL 179
++ + L D V + F G K+ Y+ L + Q K P T N L++++
Sbjct: 393 DMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
A ++++M+ N P+ TFN+++ F + A + +
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIH-----TFNMIMKSYFMARNYEMGRAVWEEM----I 500
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
K D Y +I G EA EE+ K +
Sbjct: 501 KKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 11/245 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
+++S+N +++ + + DV EL+ + P V+Y L K + EA+ L
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 86 LREMLNKGHGADSLVYNN-LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L E+ NKG D + +N L+S +L+ G + E++ ++ E+ + D +
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA 261
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
N + KE ++ + L K + N ++ + GK +A A + +++ + P
Sbjct: 262 NEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP--- 318
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ TF +++ G F A+ F+ ++ SK + + ++ +
Sbjct: 319 --DKATFALLLPAMCKAGDFESAIELFK----ETFSKRYLVGQTTLQQLVDELVKGSKRE 372
Query: 265 EAETL 269
EAE +
Sbjct: 373 EAEEI 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 95/239 (39%), Gaps = 13/239 (5%)
Query: 2 YR-AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
YR +K+++ LF+ + +I P+IVSYN +I C++ + A+ L I
Sbjct: 154 YRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE-IENKGLK 212
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE- 119
P VT+ L G+ ++ +M+ K D YN + G L N K+ E
Sbjct: 213 PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG---LANEAKSKEL 269
Query: 120 --LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
LF ELK L D + N G+ EA YK ++ ++ T +LL
Sbjct: 270 VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
+ K G A LF + V T +V+E K EA + A T
Sbjct: 330 MCKAGDFESAIELFKETFSKRY-----LVGQTTLQQLVDELVKGSKREEAEEIVKIAKT 383
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 15 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 74
+ FT+ N++S+N+VI+ G+ + A+EL+ + + P + T+ L GF
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG-LKPDSATWNSLISGFS 344
Query: 75 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 134
G+++EA ML+ +L+S ++ L E+ + + D
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDR--QFKMTPVTCNVLLEVLLKHGKKTQAWALFD 192
V + ++ + G A + + DR PV NV++ KHG+ A +F+
Sbjct: 405 VLTSLIDMYMKCGLSSWA----RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 252
+ + P+ TF +++ C + G + FR + K + +
Sbjct: 461 LLREEKVEPSLA-----TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMID 515
Query: 253 IISRFCENGLLSEAETLFEEL 273
++ R +G L EA+ + +++
Sbjct: 516 LLGR---SGRLREAKEVIDQM 533
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 38/289 (13%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P+ SYN +++ + +V E + PF A ++ + G+ G + +A +
Sbjct: 122 PDTFSYNIMLSCYVR----NVNFEKAQSFFDRMPF-KDAASWNTMITGYARRGEMEKARE 176
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
L M+ K + + +N +ISG++E G+L+KA+ F R GVV T M +
Sbjct: 177 LFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVR-----GVVAWTAMITGY 227
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
+ E ++ D VT N ++ +++ + LF ML+ PN
Sbjct: 228 MKAKKVELAEAM--FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 205 AVNSDTFNIMVNECFNLGK-FHEA----------------LATFRKAGTKSNS-KAFAM- 245
++S LG+ H+ ++ + K G ++ K F +
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 246 ---DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
DV +N +IS + ++G +A LF E+ + PD T A + A
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 43 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 102
VD LEL+R I A P + Y L K A R +EA L EM++KG YN
Sbjct: 595 VDRGLELFRDICANG-HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Query: 103 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 162
++I G+ + G +D+ + E D + + + +GR EA+ + + +
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
Query: 163 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
+T L++ L K G +A F +M + P+
Sbjct: 714 DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPD 753
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 116/288 (40%), Gaps = 16/288 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I+P+ S + VIN +VD+A+ L I+ P + Y ++ +G GR E+
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRSEES 493
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT--YM 140
L LL EM + G N + E + A +L ++ R ++ + T +
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM--RFYGFEPWIKHTTFLV 551
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ NGR +A + F V ++ L+K+ + LF + N
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P+ A +++++ + EA F + SK VA YN++I +C+
Sbjct: 612 PDVIA-----YHVLIKALCKACRTMEADILF----NEMVSKGLKPTVATYNSMIDGWCKE 662
Query: 261 GLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTATSKYWN 308
G + + + +PDV T+ + + S G P+ A + WN
Sbjct: 663 GEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCAS-GRPSEAIFR-WN 708
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
+ +A R EA LF+ ++ + P + +YN++I+ C EG +D L +
Sbjct: 624 LCKACRTMEADILFNEMVSKG-LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-N 681
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P +TY L G ++GR EA+ EM K + + + LI G + G +A
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 121 FDELKERCLVYDGVV 135
F E++E+ + D V
Sbjct: 742 FREMEEKEMEPDSAV 756
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 34/221 (15%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL---------------- 47
+K+ +EA+ F + I P++V+YN +I C +G +D L
Sbjct: 170 SKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLI 229
Query: 48 -------ELYRH-----------IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
E YR ++ + P+ +Y +G + +AL+L+ M
Sbjct: 230 SFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVM 289
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 149
+G D YN LI+ + NL++ + ++E+KE+ L D V + G
Sbjct: 290 KTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDL 349
Query: 150 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 190
A++ + + + P ++E L+ GK +A L
Sbjct: 350 DRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 49/273 (17%)
Query: 33 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 92
+I CD G+ A EL+ I +AV+Y + GF+ AGR EA L E K
Sbjct: 122 MIKNKCDLGK---AYELFCDIPE-----KNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 93 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 152
DS+ N L+SG+L G ++A +F + V + V ++ + + GR +A
Sbjct: 174 FR--DSVASNVLLSGYLRAGKWNEAVRVFQGMA----VKEVVSCSSMVHGYCKMGRIVDA 227
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
+SL DR + +T +++ K G + LF +M VNS+T
Sbjct: 228 ----RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK----VNSNTLA 279
Query: 213 IMVNECFNLGKFHEA----------------------LATFRKAGTKSNSKA-FAM---- 245
+M C + ++ E ++ + K G +KA F +
Sbjct: 280 VMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK 339
Query: 246 DVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
D +N++I+ + +SEA LFE++ K +
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKDM 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 25/241 (10%)
Query: 55 ATAPFG----PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 110
A A FG +V++ L G + +I EA +L +M G D + + ++I GF
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSG 384
Query: 111 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 170
G + K ELF + E+ D + + F +NG +EA+ + ++ ++ T
Sbjct: 385 KGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 171 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
+ +L + + +++ + + NS M +C N ++ +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS--LVSMYCKCGNTNDAYKIFSC 498
Query: 231 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVS 290
+ ++ YN +IS + NG +A LF L S P+ T A +S
Sbjct: 499 ISEP-----------NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 291 A 291
A
Sbjct: 548 A 548
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 119/267 (44%), Gaps = 22/267 (8%)
Query: 14 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
H + ++ + ++++ + GR++ A +L+ I P S VT+ L G+
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI----P-DRSVVTWTALFSGY 187
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
++GR EA+DL ++M+ G DS ++S + +G+LD + ++E + +
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V T + + G+ M+ +S+ D + VT + +++ + + LF Q
Sbjct: 248 FVRTTLVNLYAKCGK----MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 194 MLDNHTPPNFQAVNSDTFNIM--VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 251
ML + P D F+I+ ++ C +LG AL + + F ++ N
Sbjct: 304 MLQENLKP-------DQFSIVGFLSSCASLG----ALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 252 NIISRFCENGLLSEAETLFEELCSKSL 278
+I + + G ++ +F+E+ K +
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDI 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 33/284 (11%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVIN----THCDEGRVDVALELYRHIIATA 57
+R +Y+ + F+ + PNI YN++IN H +D+ L + +H +
Sbjct: 58 FRQTKYS------YLLFSHTQF-PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLH 110
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
F T+ + K A +DL ++ G D +L+S + G L+ A
Sbjct: 111 GF-----TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDA 165
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
++LFDE+ +R +V + + Y +GR +EA+D +K +++ K +L
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYT----TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
+ G + M + NS +VN GK +A + F K
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQK-----NSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 238 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
D+ ++ +I + N E LF ++ ++L PD
Sbjct: 277 --------DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 28/274 (10%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+ ++ALFH I P++ + INT G D A LY ++++ P+ T
Sbjct: 79 KIRHSLALFH-----QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE-INPNEFT 132
Query: 66 YRHLTKGF-ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
+ L K +G+++ +L G G D V L+ + + G++ A ++FD +
Sbjct: 133 FSSLLKSCSTKSGKLIHT-----HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 125 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
ER LV + Y + + +++ ++L D + V+ NV+++ +HG
Sbjct: 188 PERSLVSSTAMITCYAK--------QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
A LF ++L P + T ++ C +G AL T R S
Sbjct: 240 NDALMLFQKLLAEGKPKP----DEITVVAALSACSQIG----ALETGRWIHVFVKSSRIR 291
Query: 245 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
++V +I + + G L EA +F + K +
Sbjct: 292 LNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGR-VDVALELYRHIIATAPFGP 61
+ K+ EA + + + P+ V+YN + + +G V E+ ++ P
Sbjct: 200 KKKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 121
+ T + G+ GR+ + L +R M A+ +V+N+LI+GF+E+ + D +E
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE-- 316
Query: 122 DELKERCLVYDGVVNATYMEWFFNN-----GRDKEAMDSYKSLMDRQFKMTPVTCNVLLE 176
V T + FN G K + + + K +T + ++
Sbjct: 317 -------------VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 177 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 236
G +A +F +M+ P+ A ++I+ + +A
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHA-----YSILAKGYVRAKEPKKAEELLETLIV 418
Query: 237 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 284
+S +V + +IS +C NG + +A +F ++C +SP++ T
Sbjct: 419 ESRP-----NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R +EA+ LF N +P++V++ ++ + + G+ L+++ ++A+ P+A T
Sbjct: 212 RTHEALELFSQI-KDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG-VSPNAYT 269
Query: 66 YRHLTKGFISAGRI-VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
Y L KG + G+ +A L EM+ G ++ Y + F+ G + A EL E+
Sbjct: 270 YSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEM 329
Query: 125 KERCLVYDGVVNATYMEW 142
K + V D +E+
Sbjct: 330 KGKGFVPDEKAVREALEY 347
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 17/267 (6%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+ + +++ + GR+D A R + +P V + + G++ R EAL+L
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEA----RVLFERSPV-KDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 145
R M G D+ V +L++G + G L++ + + E + D VV ++ +
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 146 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 205
G + A++ + + +R + L+ L +G +A L+ +M + A
Sbjct: 327 CGCIETALEVFYEIKERD----TASWTSLIYGLAMNGMSGRALDLYYEM--ENVGVRLDA 380
Query: 206 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
+ TF ++ C + G E F + N + + + +I C GLL E
Sbjct: 381 I---TFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS---CLIDLLCRAGLLDE 434
Query: 266 AETLFEELCSKSLSPDVPTHFACVSAA 292
AE L +++ +S VP + + +SAA
Sbjct: 435 AEELIDKMRGESDETLVPVYCSLLSAA 461
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 17 FFTQSNIVPNIVSYNNVINTHC---DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 73
+ +Q +++ + Y+ ++++ C D DV Y + F P Y + +
Sbjct: 204 YMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG--YLEDLRKTRFSPGLRDYTVVMRFL 261
Query: 74 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 133
+ GR E + +L +M D + Y ++ G + + KA++LFDEL L D
Sbjct: 262 VEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDV 321
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
Y+ + A+ S+ + VT N+L++ L+K G ++A L+ +
Sbjct: 322 YTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKE 381
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV----AG 249
M N NS TF+IM++ + + A +AF M+V +
Sbjct: 382 METNGVNR-----NSHTFDIMISAYIEVDEVVCAHGLL--------EEAFNMNVFVKSSR 428
Query: 250 YNNIISRFCENGLLSEAETLFEEL 273
+ISR CE GL+ +A L L
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHL 452
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 117/301 (38%), Gaps = 82/301 (27%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA-PFGP 61
+AK+ + + +F +S + +YN +I + C GR D+ALE Y+ ++ FG
Sbjct: 236 KAKKIGKGLLVFEKM-RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGL 294
Query: 62 SAVTYR-----------------------------------HLTKGFISAGRIVEALDLL 86
TY+ +L K F +G+I EAL+L+
Sbjct: 295 R--TYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 87 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL----VYDGVVNATYM-- 140
RE+ NK D+ + L+ G + A E+ D +K R L VY G++ + Y+
Sbjct: 353 RELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVY-GIIISGYLRQ 411
Query: 141 ----------EWFFNNGRDKEAMDSYKSLMDRQFKMTPVT--CNVLLEVL---------- 178
E +GR + +Y +M FK+ CN+ E++
Sbjct: 412 NDVSKALEQFEVIKKSGRPPR-VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 179 --------LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 230
L + +AW +F M + P ++ +++I V E ++ E +
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK-----SYSIFVKELCRSSRYDEIIKI 525
Query: 231 F 231
F
Sbjct: 526 F 526
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P V Y + G++ EAL L + D Y +++ G L+ G+L KA +
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
+ +KE V + + +FF + ++ +++ + + + + VT ++ +
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 218
GK +AW F M + T P+F+ S N + C
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTY-SKFINCLCQAC 973
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 12/277 (4%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
+S + + Y +I++ G+VD E++ H ++ + + T+ L G A
Sbjct: 492 LVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF-HQMSNSGVEANLHTFGALIDGCARA 550
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC--LVYDGV 134
G++ +A + +K D +V+N LIS + G +D+A ++ E+K + D +
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
M+ N G+ + A + Y+ + + TP + + K G A +++ M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 195 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 254
+ P + F+ +++ + EA + A S+ + Y++++
Sbjct: 671 KEKDVTP-----DEVFFSALIDVAGHAKMLDEAFGILQDA----KSQGIRLGTISYSSLM 721
Query: 255 SRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
C +A L+E++ S L P + T A ++A
Sbjct: 722 GACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 18/267 (6%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV-EALDLLRE 88
YN I+ R D A E+Y + + P VT L AGR E ++ +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVY-PDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 89 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 148
M KG V+ L+ F + G ++A + E++++ + + +V T M+ + +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
+E + + D+ K + T N+L++ + + L +M D PN +
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK---- 450
Query: 209 DTFNIMVNECFNLGKFH----EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
++ +++ K +A +K G K +S + Y +I + +G
Sbjct: 451 -SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS-------YTALIHAYSVSGWHE 502
Query: 265 EAETLFEELCSKSLSPDVPTHFACVSA 291
+A FEE+C + + P V T+ + + A
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDA 529
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 30/269 (11%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
+ VS+N +I+++ +G + A L+ + +P ++ L G+++ + L
Sbjct: 200 DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP-----ASWNILIGGYVNC----REMKL 250
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFF 144
R + + + + +ISG+ +LG++ A ELF + K+ LVYD ++ A Y +
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI-ACYTQ--- 306
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
NG+ K+A+ + +++R + P +T + ++ + G + F ++++ +
Sbjct: 307 -NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS-----FGTWVESYITEH 360
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
++ +++ G F +A F K D Y+ +I NG+
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK--------DTVSYSAMIMGCGINGM 412
Query: 263 LSEAETLFEELCSKSLSPDVPTHFACVSA 291
+EA +LF + K + P+V T +SA
Sbjct: 413 ATEANSLFTAMIEKKIPPNVVTFTGLLSA 441
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 18/279 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK EA LF + PN+++Y ++N C + A ++ +I P
Sbjct: 276 RAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG-LKPD 332
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V + + +G + + + +A+ L M +KG + Y +I F + +++ A E FD
Sbjct: 333 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP---VTCNVLLEVLL 179
++ + L D V + F G K+ Y+ L + Q K P T N L++++
Sbjct: 393 DMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
++++M+ N P+ TFN+++ F + A + +
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIH-----TFNMIMKSYFVARNYEMGRAVW----DEMI 500
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
K D Y +I G EA EE+ K +
Sbjct: 501 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 18/279 (6%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
RAK EA LF + PN+++Y ++N C + A ++ +I P
Sbjct: 275 RAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG-LKPD 331
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V + + +G + + + +A+ L M +KG + Y +I F + +++ A E FD
Sbjct: 332 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 391
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP---VTCNVLLEVLL 179
++ + L D V + F G K+ Y+ L + Q K P T N L++++
Sbjct: 392 DMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
++++M+ N P+ TFN+++ F + A + +
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIH-----TFNMIMKSYFVARNYEMGRAVW----DEMI 499
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 278
K D Y +I G EA EE+ K +
Sbjct: 500 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++++YN VI D G + A+ ++ + P +TY L + A++
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG-CPPFMITYTVLVELVCRYCGSARAIE 265
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L +M +G D + YN+L++ GNL++ + + L + V T +
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
++ E + + + T +T N+L+ L K ++A F QML+ P+
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
T+N ++ G +A+ G N+ + YN++I + GL+
Sbjct: 386 -----TYNTVLGAMSKEGMVDDAIELL---GLLKNT-CCPPGLITYNSVIDGLAKKGLMK 436
Query: 265 EAETLFEELCSKSLSPD 281
+A L+ ++ + PD
Sbjct: 437 KALELYHQMLDAGIFPD 453
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 10/255 (3%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
N +++ C G++ A +L ++A P + +L +G ++ +A+ +LR M+
Sbjct: 108 NEILHNLCSNGKLTDACKLVE-VMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 150
G D++ YN +I + G++ A L +++ D + T + F+ G +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 151 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 210
+A+ +K + +T VL+E++ ++ +A + + M P+ T
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV-----T 281
Query: 211 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 270
+N +VN G E + + S ++ YN ++ C + E E +
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHI----LSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 271 EELCSKSLSPDVPTH 285
+ S P V T+
Sbjct: 338 NIMYQTSYCPTVITY 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 2 YRAKRYN-EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG 60
Y +R N E +A + N V+YN ++++ C D E+ +I+ +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL-NIMYQTSYC 346
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P+ +TY L G A + A+D +ML + D + YN ++ + G +D A EL
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 161
LK C + + ++ G K+A++ Y ++D
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
++E + + + Q++ P +++YN +IN C + A++ + ++ P VTY
Sbjct: 330 WDEVEEILNIMY-QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL-PDIVTY 387
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 126
+ G + +A++LL + N + YN++I G + G + KA EL+ ++ +
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Query: 127 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ D + + + F +EA K +R + T ++++ L K +
Sbjct: 448 AGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEM 507
Query: 187 AWALFDQMLDNHTPPN 202
A + + ML P+
Sbjct: 508 AIEVVEIMLTGGCKPD 523
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 12/269 (4%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 77
+ N VP+ S +N++ ++D A+ + R ++ + P +TY + G
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGV-PDTITYNMIIGNLCKKG 188
Query: 78 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF-DELKERCLVYDGVVN 136
I AL LL +M G D + YN +I + GN ++A + D+L+ C + +
Sbjct: 189 HIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPF-MITY 247
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+E A++ + + VT N L+ + G + ++ +L
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 256
+ +N+ T+N +++ + HE + ++ V YN +I+
Sbjct: 308 HGL-----ELNTVTYNTLLHSLCS----HEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 257 FCENGLLSEAETLFEELCSKSLSPDVPTH 285
C+ LLS A F ++ + PD+ T+
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ + P ++ + +I+ G+++ A + + P V Y + G+IS G +
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLE-ACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+A ++ +EM KG + YN++I GF G +A L E++ R + VV +T
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 140 MEWFFNNGRDKEAMDSYKSLMDR 162
+ N G+ EA + K ++++
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEK 461
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 6/208 (2%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ P++++YN V+ + G+ D L ++ F P TY L + +
Sbjct: 250 EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDG-FSPDLYTYNILLHHLATGNKP 308
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
+ AL+LL M G + + LI G G L+ DE + D V
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
+ + + G ++A + +K + ++ T N ++ GK +A AL +M
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEA 227
PNF ++ +VN N GK EA
Sbjct: 429 NPNFVV-----YSTLVNNLKNAGKVLEA 451
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++ +YN +++ + AL L H+ P + + L G AG++
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMREVG-VEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+ E + G D + Y +I+G++ G L+KA E+F E+ E+ + + + + F
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
G+ KEA K + R V + L+ L GK +A + M++
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 128/274 (46%), Gaps = 29/274 (10%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 83
V ++V+++ ++++ + G V AL +++ ++ P AVT + +G G + A
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIAR 222
Query: 84 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 143
+ ++ K D + N+L++ + + G+L + +F+++ ++ V+ T M
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK-----NAVSWTAMISS 277
Query: 144 FNNGR-DKEAMDSYKSLMDRQFKMTPVTCNVLLEV-----LLKHGKKTQAWALFDQMLDN 197
+N G ++A+ S+ ++ + VT +L L++ GK +A+ ++
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL--- 334
Query: 198 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 257
PN+++++ + EC GK + R + ++ +N++IS +
Sbjct: 335 --DPNYESLSLALVELYA-EC---GKLSDCETVLRVVSDR--------NIVAWNSLISLY 380
Query: 258 CENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
G++ +A LF ++ ++ + PD T + +SA
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 66/314 (21%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
+ +R NEA LF + N+VS+ ++ CD+GR + A+EL+ + +
Sbjct: 120 KCRRMNEAWTLFR------EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER-----N 168
Query: 63 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V++ L G I G + +A + M ++ D + +N +I G++E +++A LF
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 123 ELKERCLVYDGVVNATYMEW-FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 181
++ E+ VV T M + + G +EA + + +R V+ ++ +
Sbjct: 225 DMSEK-----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWN 275
Query: 182 GKKTQAWALFDQM---LDNHTPPNFQAVNSDTFNIMVNECFNLG--------KFHEALAT 230
+A LF +M +D +P N +T + C LG + H + +
Sbjct: 276 ELYREALMLFLEMKKDVDAVSP------NGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 231 -------------------FRKAGTKSNSKAF---AMDVAGYNNIISRFCENGLLSEAET 268
+ +G +++++ + D+ N II+R+ +NG L AET
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAET 389
Query: 269 LFEELCSKSLSPDV 282
LFE + KSL V
Sbjct: 390 LFERV--KSLHDKV 401
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
Query: 17 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 76
F + + + VS+ ++I+ + + G V A L++ + VT+ + G +
Sbjct: 390 LFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL-----HDKDGVTWTVMISGLVQN 444
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG--V 134
EA LL +M+ G + Y+ L+S NLD+ + + + YD +
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 194
+ + + + G ++A + + ++ + V+ N ++ L HG +A LF +M
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKD----TVSWNSMIMGLSHHGLADKALNLFKEM 560
Query: 195 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 254
LD+ P NS TF +++ C + G L F KA ++ S +D Y ++I
Sbjct: 561 LDSGKKP-----NSVTFLGVLSACSHSGLITRGLELF-KAMKETYSIQPGID--HYISMI 612
Query: 255 SRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
G L EAE L +PD + A + G
Sbjct: 613 DLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLGLCG 648
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 36/242 (14%)
Query: 47 LELYRHIIATAPFGPSAVTYRHLTKGF----------ISAGRIVEALDLLREMLNKGHGA 96
L L I +G Y +GF +S G +V A LL ++ +G
Sbjct: 16 LSLRSSISCRRYYGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSIN 75
Query: 97 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 156
+ + +L+S + + G LD+A LF+ + ER +V NA + + R EA +
Sbjct: 76 RVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV---TCNAM-LTGYVKCRRMNEAWTLF 131
Query: 157 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 216
R+ V+ V+L L G+ A LFD+M + N ++N +V
Sbjct: 132 -----REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER---------NVVSWNTLVT 177
Query: 217 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 276
G +A F ++ DV +N +I + EN + EA+ LF ++ K
Sbjct: 178 GLIRNGDMEKAKQVFDAMPSR--------DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 277 SL 278
++
Sbjct: 230 NV 231
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 25 PNIVSYNNVINTHCDEGRV---DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
P I ++N +++ C G V + L RH + P A T+ L G+ +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRV-----KPDANTFNVLFFGWCRVRDPKK 286
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD------------------- 122
A+ LL EM+ GH ++ Y I F + G +D+A +LFD
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 123 --------ELKERC------LVYDGVVN--ATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 166
+ E C ++ G + +TY + ++ ++YK L + K
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 167 TP---VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 223
P VT N L VL ++ K +A L+ +M+++ P+ Q T+N++++ F +
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ-----TYNMLISMFFEMDD 461
Query: 224 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 279
A T+ T+ + + DV Y +I+ + EA L EE+ +K L
Sbjct: 462 PDGAFNTW----TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK 513
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 8 NEAIALFHFFFTQSNIV--PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+EA LF F T+ + V P ++ +I + + EL +I+T P T
Sbjct: 320 DEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCL-PDVST 378
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
Y+ + +G A ++ EA L EM NKG+ D + YN + E D+A +L+ +
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 126 E-RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
E RC N + FF A +++ + R T ++ L +
Sbjct: 439 ESRCAPSVQTYN-MLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 244
+A L +++++ ++ D+F + ++E NL H+ +K S ++ FA
Sbjct: 498 KEACFLLEEVVNKGLKLPYRVF--DSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFA 555
Query: 245 M 245
+
Sbjct: 556 L 556
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 33/298 (11%)
Query: 3 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 62
R+ + EA+ +F P+ V+ ++V+ + D +++ ++ ++I
Sbjct: 229 RSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 63 AVTYRHLTKGFISAGRIVEALDLLR--EMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
V + + +G + + L EM+ G V N I+G G +DKA E+
Sbjct: 288 CVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAG------VCNAYITGLSRNGLVDKALEM 340
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL-- 178
F+ KE+ + + V + + NG+D EA++ ++ + K VT +L
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 179 ---LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 235
L HG+ T +A+ +LDN V S + M +C G+ + + F
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDN------VHVGSALID-MYAKC---GRINLSQIVFNMMP 450
Query: 236 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
TK ++ +N++++ F +G E ++FE L L PD + + +SA G
Sbjct: 451 TK--------NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 119/284 (41%), Gaps = 24/284 (8%)
Query: 15 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 74
H + ++ P++ N ++N + G +D+A+ ++R + A +++ + KG++
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-----DVISWTSIVKGYV 313
Query: 75 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 134
G L L R ++ D + + +I G+L G +++ E+F E++ ++ D
Sbjct: 314 ERGN----LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 135 VNATYMEWFFNNGRDKEAMDSYKSLMDR-QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
+ + + G E + K+ +D+ + K V N L+++ K G +A +F
Sbjct: 370 TMVSVLTACAHLG-SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M + T+ MV N G+ EA+ F + + D Y +
Sbjct: 429 M---------DQRDKFTWTAMVVGLANNGQGQEAIKVF----FQMQDMSIQPDDITYLGV 475
Query: 254 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
+S +G++ +A F ++ S H+ C+ G G
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 21/221 (9%)
Query: 73 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 132
+ S GRI A ++ EM ++ D + +N +I + G +D+A +LF+E+K+ ++ D
Sbjct: 156 YASCGRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 133 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 192
++ + G + Y+ L++ +M L+ + G A F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 193 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 252
+M N MV+ G+ +A F + K D+ +
Sbjct: 272 KM---------SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK--------DLVCWTT 314
Query: 253 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAG 293
+IS + E+ EA +FEE+C + PDV + F+ +SA
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 8 NEAIALF-HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA-LELYRHIIATAPFGPSAVT 65
N+ + LF H +Q N P ++ +++ C ++ + +++ P VT
Sbjct: 102 NDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVT 161
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
+ GR+ EA DL++E+ K D+ YN L+ + +L E DE++
Sbjct: 162 TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR 221
Query: 126 ERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 184
+ V +V+ T + + N+ +EAM L + FK N +++ K
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 185 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSK 241
++A ++ +M + P + T+N ++ G+ EA L T AG
Sbjct: 282 SEAVGVYKKMKEEGVEP-----DQITYNTLIFGLSKAGRVEEARMYLKTMVDAG------ 330
Query: 242 AFAMDVAGYNNIISRFCENG 261
+ D A Y ++++ C G
Sbjct: 331 -YEPDTATYTSLMNGMCRKG 349
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ I P+++ Y +I+ + G +D A E++R + P+ TY + +G AG
Sbjct: 717 EVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEF 775
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 127
EA LL+EM ++G + +VY+ L+ + G L +A ++ E+ ++
Sbjct: 776 REACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 50/301 (16%)
Query: 30 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 89
YN +I ++ G +L L+ H++A+ P+ +T+ L K S+ + + L +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASH-VQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 90 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYMEWFFNNGR 148
L +G D V + + + E+G+L+ + ++FD++ C+V + +++A GR
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDAC--------GR 164
Query: 149 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH----TPPNFQ 204
+ E MD R V+ ++ K G +A +F +M+ N TP
Sbjct: 165 NGE-MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITP---- 219
Query: 205 AVNSDTFNIMVNECFN-------LGK-FHEALAT----------------FRKAGTKSNS 240
N TF +++ C N LGK H + + + KAG +
Sbjct: 220 --NEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 241 -----KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
+ V +N IIS NG +A +FE + S + P+ T A ++A S
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARS 337
Query: 296 R 296
+
Sbjct: 338 K 338
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 14/240 (5%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
I PN ++N+++ + EG ++ ++R + P+ +Y L + + + G + E
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 82 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER-----CLVYDGVVN 136
A + EM +G D + YN +I G + KA ELF ++ + CL Y+ +VN
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
+ G + Y+ + + F+ +T L+E L + D + D
Sbjct: 360 G-----YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKD 414
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL---ATFRKAGTKSNSKAFAMDVAGYNNI 253
F + + + ++V GK AL A G K + + + + GY +
Sbjct: 415 AVREAMFYP-SRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIV 473
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/244 (17%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 59 FGPSAVTYRHLTKGFISAGRIVEA---LDLLREMLNKGHGADSLVYNNLISGFLELGNLD 115
F P + Y L KG++ GR+ + L+ +R ++ D + Y ++S F+ G +D
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 116 KANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTPVTCNVL 174
+A ++ E+ + + + ++ + + A D + + D + V+ N++
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 175 LEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 234
++ + A A F++M P ++ ++ G+ A F +
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAP-----TKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 235 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGG 294
N +D+ +N ++ +C GL+ +A+ + + P+V T+ + +
Sbjct: 585 ---MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 295 SRGP 298
+R P
Sbjct: 642 ARKP 645
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P VTY + F++AG + A +L EM G A+ + YN L+ G+ + +D+A +L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 121 FDELKERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 179
E+ E + VV+ ++ A+ + + R T ++ L++
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 180 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 239
G+ A +FD+M+++ P + V+ +N++V LG +A ++ ++
Sbjct: 570 MSGQPKLANRVFDEMMND---PRVK-VDLIAWNMLVEGYCRLGLIEDA----QRVVSRMK 621
Query: 240 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
F +VA Y ++ + + +A L++E+
Sbjct: 622 ENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 24 VP-NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
VP N ++YN ++ +C + ++D A +L R + A P V+Y + G I A
Sbjct: 483 VPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGA 542
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
L EM +G + Y L+ F G AN +FDE+
Sbjct: 543 LAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 8 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-IATAPFGPSAVTY 66
EA+A F + + + P++ +YN +IN C G A L + + + P TY
Sbjct: 182 KEALATF-YRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 67 RHLTKGFISAG-----------RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 115
L + G R+ EA + REML +G D + YN LI G + +
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 116 KANELFDELKERCLVYDGVVNATYMEWF 143
+A ELF+++K + V + V +++ ++
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYY 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 83
VP++V+YN +I+ C R+ ALEL+ + T P+ VTY + + I A+
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDM-KTKGCVPNQVTYNSFIRYYSVTNEIEGAI 338
Query: 84 DLLREMLNKGHGAD-SLVYNNLISGFLELGNLDKANELFDELKERCLV 130
+++R M GHG S Y LI +E +A +L E+ E LV
Sbjct: 339 EMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV 386
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
++PN SYN ++ C + +A +L+ ++ P +Y+ L +GF G++ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-PDVDSYKILIQGFCRKGQVNGA 244
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
++LL +MLNKG D LI G + G D+ + +E+ + V+ ++
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 143 FFNNGRDKEAMDSYKSLM--------DRQFKMTPVTCN 172
F + G+ +EA D + +M D + P+ CN
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
I P+ ++N +I+ C + D A + ++ F P VTY + + G
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMM-DLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
++L EM G + + Y ++ + + +A +++++KE V D ++ +
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 143 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 202
GR K+A + ++ + ++ + + N ++ L H + A L +M D
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC 447
Query: 203 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 262
+ N +T+ ++ K + L K++ ++DV+ Y +I C +G
Sbjct: 448 --SPNVETYAPLLKM-CCHKKKMKLLGILLHHMVKND---VSIDVSTYILLIRGLCMSGK 501
Query: 263 LSEAETLFEELCSKSLSP 280
+ EA FEE K + P
Sbjct: 502 VEEACLFFEEAVRKGMVP 519
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 135/304 (44%), Gaps = 48/304 (15%)
Query: 1 MY-RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF 59
MY + ++ NEA +F + ++VS+N ++ + G +ALE+ +
Sbjct: 179 MYAKCRQVNEARKVFDRMPER-----DLVSWNTIVAGYSQNGMARMALEMVK-------- 225
Query: 60 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH---------GADSLV--YNNLISGF 108
++ +L FI+ ++ A+ LR +++ G G DSLV L+ +
Sbjct: 226 ---SMCEENLKPSFITIVSVLPAVSALR-LISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 109 LELGNLDKANELFDELKERCLV-YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 167
+ G+L+ A +LFD + ER +V ++ +++A + N KEAM ++ ++D K T
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDA-----YVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 168 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 227
V+ L G + + ++ N VNS +++ + A
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS-----LISMYCKCKEVDTA 391
Query: 228 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFA 287
+ F K +++ + +N +I F +NG +A F ++ S+++ PD T+ +
Sbjct: 392 ASMFGKLQSRT--------LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 288 CVSA 291
++A
Sbjct: 444 VITA 447
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 66
+ +A+ F++ +S ++N VI+ +++ L +I P+ VT+
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTF 120
Query: 67 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL------ 120
R + K +++A + EA+D + L+ + D + NL+ E ++ +A EL
Sbjct: 121 RIVFKRYVTAHLVQEAIDAY-DKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 121 ------FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV-TCNV 173
K L+ G + + W+ G+ KE Y MD + + + ++
Sbjct: 180 IGNGFSVSNTKIHNLILRG---WSKLGWW---GKCKE----YWKKMDTEGVTKDLFSYSI 229
Query: 174 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 233
++++ K GK +A L+ +M + A N+ I ++ G R+
Sbjct: 230 YMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG--IRVFREMRE 287
Query: 234 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVS 290
G + N VA +N II CE+G + +A + +E+ + PD T+ S
Sbjct: 288 RGCEPN-------VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS 337
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN+V YN +I++ R A +Y+ +I T F P+ TY L + + A +A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK--ERCLVYDGVVNATYM 140
L + REM KG ++YN L+S + +D+A E+F ++K E C D ++ +
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC-DPDSWTFSSLI 428
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL---FDQMLDN 197
+ +GR EA + + + F+ T VL V+ +GK Q + FDQ+L+
Sbjct: 429 TVYACSGRVSEAEAALLQMREAGFEPTLF---VLTSVIQCYGKAKQVDDVVRTFDQVLEL 485
Query: 198 HTPPN 202
P+
Sbjct: 486 GITPD 490
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 31/302 (10%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
+Y +A+AL+ F + + P+ ++ V+ G V + ++R ++ FG
Sbjct: 175 QYEDAMALY-FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG-FGYDVYV 232
Query: 66 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 125
L + G IV+A ++ + +K D + +N++++G+L G L +A ++F +
Sbjct: 233 LNALVVMYAKCGDIVKARNVFDMIPHK----DYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 126 ERCLVYDGVVNATYMEWF--FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ + D V ++ + F +GR ++ R + N L+ + K G+
Sbjct: 289 QNGIEPDKVAISSVLARVLSFKHGRQLHGW-----VIRRGMEWELSVANALIVLYSKRGQ 343
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
QA +FDQML+ T +++ + N N K+ E + +A K + F
Sbjct: 344 LGQACFIFDQMLERDTVSWNAIISAHSKN------SNGLKYFEQM---HRANAKPDGITF 394
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT-HFACVSAAGGSRGPPTTA 302
+++S G++ + E LF L SK D H+AC+ G G A
Sbjct: 395 V-------SVLSLCANTGMVEDGERLF-SLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 303 TS 304
S
Sbjct: 447 YS 448
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+VSYN ++ C + A +L I G SA T+ L G + G I + +
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM-EWFF 144
+++ G + V N LIS + + G++D A+ +F+ ++ R V++ T M F
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-----NVISWTSMITGFA 551
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 198
+G ++++ +++ K VT +L G ++ W F+ M ++H
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN---VINTHCDEGRVDVALELYRHIIATA 57
+ ++ R +E + +F T N+ P+ +S NN +I C+E + A+ +R +I
Sbjct: 105 LRQSSRLHEILPVFD---TWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDH 161
Query: 58 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 117
PS Y + + G+ EA+ L M G + Y+ LI + + D+
Sbjct: 162 ELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEI 221
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
++ V D V + F G K Y+SLM R+ + P T +LE
Sbjct: 222 VLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEA 281
Query: 178 LLKHG 182
+ G
Sbjct: 282 YAEFG 286
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+VP+ ++YN++I+ C + ++ A ++ + S T+ L G+ A R+ +
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKVSK----------SCSTFNTLINGYCKATRVKDG 125
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 124
++L EM +G A+ + Y LI GF ++G+ + A ++F E+
Sbjct: 126 MNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+SN+ + YN +I+ C G+ D A ++ +++ + P TY + + F S GR
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISG-LQPDVQTYNMMIR-FSSLGR- 63
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
A L EM+ +G D++ YN++I G + L +A ++ + C ++ ++N
Sbjct: 64 --AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR----KVSKSCSTFNTLING-- 115
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 197
+ R K+ M+ + + R +T L+ + G A +F +M+ N
Sbjct: 116 ---YCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 45/297 (15%)
Query: 1 MYRAKRYNEAIALFHFFFTQSNIV--------PNIVSYNNVINTHCDEGR-VDVALELYR 51
+ RA R+ EAI + V P +Y N+I C + R ++ +++
Sbjct: 51 LCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQV-CSQTRALEEGKKVHE 109
Query: 52 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 111
HI T+ F P V + L + + G +V+A + EM N+ D +N +++G+ E+
Sbjct: 110 HI-RTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEV 164
Query: 112 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 171
G L++A +LFDE+ E+ D + + + +EA+ Y SLM R P
Sbjct: 165 GLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIF 219
Query: 172 NVLLEV-------LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 224
V + V ++ GK+ + LD+ V + M +C G
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHG-HIVRAGLDS------DEVLWSSLMDMYGKC---GCI 269
Query: 225 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 281
EA F K K DV + ++I R+ ++ E +LF EL P+
Sbjct: 270 DEARNIFDKIVEK--------DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPN 318
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 15 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 74
H F++ N+ +N +I + + G A LYR + + P TY L K
Sbjct: 73 HKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 75 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDG 133
+ + + ++ G G+ V N+L+ + G++ A ++FD++ E+ LV ++
Sbjct: 133 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 192
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 193
V+N F NG+ +EA+ Y + + K T LL K G T +
Sbjct: 193 VING-----FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 194 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 253
M+ N + N++++ G+ EA F + K++ + ++
Sbjct: 248 MIKVGLTRNLH-----SSNVLLDLYARCGRVEEAKTLFDEMVDKNS--------VSWTSL 294
Query: 254 ISRFCENGLLSEAETLFE 271
I NG EA LF+
Sbjct: 295 IVGLAVNGFGKEAIELFK 312
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 32/283 (11%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
N+ + N + T C E V+ A ++ I P +TYR + +GF G ++EA L
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVF--IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKL 237
Query: 86 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFF 144
M+++G D ++ L+ D+A+++F + +R DG ++W
Sbjct: 238 WNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLC 297
Query: 145 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 204
NGR A + + +R + +T L+ LL + +A+ L + +
Sbjct: 298 KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVE---------GVE 348
Query: 205 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 264
+ ++ ++ + + EA FRK +I R CE + +
Sbjct: 349 NPDISIYHGLIKGLVKIKRASEATEVFRK-------------------MIQRGCEPIMHT 389
Query: 265 EAETLFEELCSKSLS-PDVPTHFACVSAAGGSRGPPTTATSKY 306
L L + PD +F + G + T+KY
Sbjct: 390 YLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKY 432
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 21/282 (7%)
Query: 21 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 80
SN VP++ +N ++N ++ A +L+ + A P+ VTY L +G+ R+
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMN-VKPTVVTYGTLIEGYCRMRRVQ 302
Query: 81 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD-GVVNATY 139
A+++L EM + +V+N +I G E G L +A + ER V + G TY
Sbjct: 303 IAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMM----ERFFVCESGPTIVTY 358
Query: 140 ---MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
++ F G A K +M R T T N + KH K + L+ ++++
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 197 -NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 255
H+P T+++++ GK A+ + + ++ D+ +I
Sbjct: 419 AGHSPDRL------TYHLILKMLCEDGKLSLAM----QVNKEMKNRGIDPDLLTTTMLIH 468
Query: 256 RFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRG 297
C +L EA F+ + + P T F + S+G
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGIIPQYIT-FKMIDNGLRSKG 509
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 35/236 (14%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-------- 53
+R+++ +A L+ N+ P +V+Y +I +C RV +A+E+ +
Sbjct: 261 FRSRKLKQAEKLWEEM-KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319
Query: 54 -IATAPF-------------------------GPSAVTYRHLTKGFISAGRIVEALDLLR 87
+ P GP+ VTY L K F AG + A +L+
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
Query: 88 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 147
M+ +G + YN+ F + ++ L+ +L E D + ++ +G
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Query: 148 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 203
+ AM K + +R +T +L+ +L + +A+ FD + P +
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
V + + G+ + + EAL+L+++M G D + +N LISGF + N +K +E+ +
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL----- 178
+ D V + + +N ++++A D++K ++ T LL
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 179 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 238
+KHGK+ +++ + D+ V S + M +C G EA+ FRK K+
Sbjct: 304 MKHGKEIHGYSVVTGLEDH------GFVRSALLD-MYGKC---GFISEAMILFRKTPKKT 353
Query: 239 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+N++I + +GL +A LF+++ + D T A ++A
Sbjct: 354 T--------VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 44/262 (16%)
Query: 20 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 79
+ N +S+N ++N + + D+ +++ + P +Y L KG G
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSF 193
Query: 80 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 139
EA+ L+ E+ NKG D + +N L+ G ++ +++ + E+
Sbjct: 194 TEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK------------ 241
Query: 140 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 199
N RD + SY N L L K + +LFD++ N
Sbjct: 242 -----NVKRD---IRSY---------------NARLLGLAMENKSEEMVSLFDKLKGNEL 278
Query: 200 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 259
P+ TF M+ + GK EA+ T+ K K+ + +N+++ C+
Sbjct: 279 KPDVF-----TFTAMIKGFVSEGKLDEAI-TWYKEIEKNGCRPLKF---VFNSLLPAICK 329
Query: 260 NGLLSEAETLFEELCSKSLSPD 281
G L A L +E+ +K L D
Sbjct: 330 AGDLESAYELCKEIFAKRLLVD 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 1/191 (0%)
Query: 4 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 63
+K+++ +F + +I P++ SYN +I C +G A+ L I P
Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE-IENKGLKPDH 212
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
+T+ L + G+ E + M+ K D YN + G ++ LFD+
Sbjct: 213 ITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDK 272
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
LK L D ++ F + G+ EA+ YK + + N LL + K G
Sbjct: 273 LKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGD 332
Query: 184 KTQAWALFDQM 194
A+ L ++
Sbjct: 333 LESAYELCKEI 343
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 113/280 (40%), Gaps = 28/280 (10%)
Query: 19 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 78
T S P++++ N DE E ++ F + Y + +A +
Sbjct: 33 TPSPPKPSLITLVN------DERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKK 86
Query: 79 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER-----CLVYDG 133
++L E + + +I+ + +G + A ++FDE+ ER L ++
Sbjct: 87 FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
Query: 134 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALF 191
++NA N + + ++ + + + P + N L++ L G T+A AL
Sbjct: 147 LLNACV------NSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200
Query: 192 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 251
D++ + P+ TFNI+++E + GKF E + + K+ + D+ YN
Sbjct: 201 DEIENKGLKPD-----HITFNILLHESYTKGKFEEGEQIWARMVEKNVKR----DIRSYN 251
Query: 252 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+ E +LF++L L PDV T A +
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 116/305 (38%), Gaps = 14/305 (4%)
Query: 7 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP---FGPSA 63
Y+ I +F + P+ Y ++ H G +EL++ + S
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 64 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 123
Y + +GR EAL++L EM +KG S +Y+ LI F E + +LF E
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 124 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 183
+ L+ D + + + G + ++ ++ + K+T ++ K
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
+A +++ + T+ I +N L K+++A F + K F
Sbjct: 369 FAEAVKVYEWAMKEECE-----AGQVTYAIAINAYCRLEKYNKAEMLF----DEMVKKGF 419
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGSRGPPTTAT 303
V Y+NI+ + + LS+A L ++ + P++ + + + G R
Sbjct: 420 DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHG--RAMDLRRA 477
Query: 304 SKYWN 308
K W
Sbjct: 478 EKIWK 482
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 33/267 (12%)
Query: 26 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 85
++ ++N+V+N + G +D A +L+ + + +++ L G++ G+ EALDL
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPER-----NVISWSCLINGYVMCGKYKEALDL 181
Query: 86 LREM-LNKGHGA----DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
REM L K + A + + ++S LG L++ + + + + D V+ +
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 141 EWFFNNG---RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-- 195
+ + G R K ++ S D + + C L +G + + LF +M
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICC------LAMYGLTDECFQLFSEMTTS 295
Query: 196 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 255
DN P NS TF ++ C + G +E + F+ + Y ++
Sbjct: 296 DNINP------NSVTFVGILGACVHRGLINEGKSYFK---MMIEEFGITPSIQHYGCMVD 346
Query: 256 RFCENGLLSEAETLFEELCSKSLSPDV 282
+ +GL+ EAE+ + S + PDV
Sbjct: 347 LYGRSGLIKEAESF---IASMPMEPDV 370
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 27/263 (10%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
N++I + + + + LYR + F P T+ LTK + + + L L ++
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 150
G AD V ++ + + G + A FDE+ R V + + Y+ R
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI-------RCG 158
Query: 151 EAMDSYKSLMDRQFKMTPVTC-NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 209
E +D L D+ + V N +++ +K G T A LFD+M
Sbjct: 159 E-LDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI--------- 208
Query: 210 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 269
T+ M++ N+ A F + ++ +N +I +C+N E L
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPER--------NLVSWNTMIGGYCQNKQPQEGIRL 260
Query: 270 FEEL-CSKSLSPDVPTHFACVSA 291
F+E+ + SL PD T + + A
Sbjct: 261 FQEMQATTSLDPDDVTILSVLPA 283
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 33/259 (12%)
Query: 26 NIVSYNNVINTHCD-EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
++VS+ V++T EG LE R + P +AV + + G++ AG E L+
Sbjct: 176 SVVSWTVVLDTVVKWEG-----LERGREVFHEMP-ERNAVAWTVMVAGYLGAGFTREVLE 229
Query: 85 LLREMLNK-GHGADSLVYNNLISGFLELGNL--DKANELFDELKERCL----VYDGV-VN 136
LL EM+ + GHG + + +++S + GNL + ++ KE + YD V V
Sbjct: 230 LLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG 289
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
++ + G +M+ ++ + R VT N L L HGK +F QM+
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMRKRNV----VTWNALFSGLAMHGKGRMVIDMFPQMIR 345
Query: 197 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD--VAGYNNII 254
P + TF +++ C + G E F + + + ++ V Y ++
Sbjct: 346 EVKPDDL------TFTAVLSACSHSGIVDEGWRCFH------SLRFYGLEPKVDHYACMV 393
Query: 255 SRFCENGLLSEAETLFEEL 273
GL+ EAE L E+
Sbjct: 394 DLLGRAGLIEEAEILMREM 412
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD--ELKERCLVYDGVVNATYM 140
L L R+M ++ DS+ YN++I G+++ G + A ELFD ++ + L+ + + Y
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGY- 230
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ + +D L + ++ N +++ +KHG+ A LFD M
Sbjct: 231 ------AQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM------ 278
Query: 201 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 260
P V T+ M++ LG H A F + + DV YN++++ + +N
Sbjct: 279 PRRDVV---TWATMIDGYAKLGFVHHAKTLFDQMPHR--------DVVAYNSMMAGYVQN 327
Query: 261 GLLSEAETLFEELCSKS-LSPDVPT 284
EA +F ++ +S L PD T
Sbjct: 328 KYHMEALEIFSDMEKESHLLPDDTT 352
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 81
NI P+ +SY +I ++CD G+ + A+E+ R + + + + + G + E
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKG-VEVTIIAFTTILGSLYKNGLVDE 227
Query: 82 ALDLLREMLNKGHGADSLVYN-NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 140
A L EM+NKG D+ VYN L++ E + ++ EL +E+ L D V M
Sbjct: 228 AESLWIEMVNKGCDLDNTVYNVRLMNAAKE--SPERVKELMEEMSSVGLKPDTVSYNYLM 285
Query: 141 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 200
+ G EA Y+ L + T L+ L +G Q +F + H
Sbjct: 286 TAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI 341
Query: 201 PNFQAVNSDTFNIMVN 216
P+F+ T ++ N
Sbjct: 342 PDFKTCKHLTEGLVKN 357
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 69 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
L + + A A+ + EM G + +N L++ L ++ +LFDE +R
Sbjct: 108 LIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRY 167
Query: 129 --LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 186
+ D + ++ + ++G+ ++AM+ + + + ++T + +L L K+G +
Sbjct: 168 NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDE 227
Query: 187 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 246
A +L+ +M++ +++ +N+ + N K E+ ++ + +S D
Sbjct: 228 AESLWIEMVNKGCD-----LDNTVYNVRL---MNAAK--ESPERVKELMEEMSSVGLKPD 277
Query: 247 VAGYNNIISRFCENGLLSEAETLFEEL 273
YN +++ +C G++SEA+ ++E L
Sbjct: 278 TVSYNYLMTAYCVKGMMSEAKKVYEGL 304
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 24 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHL-----TKGFISA 76
V ++VS+N++I ++ G+ VALE++ + T FG P +T ++ + G S
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRM--TNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 136
G+ + + EM+ + V N L+ + + G +D+AN +F + + +V +
Sbjct: 248 GKQLHCFAVTSEMIQ-----NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 137 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 196
A Y + GR ++A+ ++ + + + KM VT + + + G +A + QML
Sbjct: 303 AGYSQI----GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 197 NHTPPN 202
+ PN
Sbjct: 359 SGIKPN 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 53/291 (18%)
Query: 6 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 65
R+ +A+ LF + I ++V+++ I+ + G AL + R ++++ P+ VT
Sbjct: 310 RFEDAVRLFEKM-QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVT 367
Query: 66 YRHLTKGFISAGRIVE-------ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 118
+ G S G ++ A+ ++ GHG +++V N LI + + +D A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 119 ELFDEL--KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP-------- 168
+FD L KER +V V+ Y + +G +A++ + + + P
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQ----HGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 169 -VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 227
V C L L+ GK+ A+AL +Q N P + V+ C
Sbjct: 484 LVACASL--AALRIGKQIHAYALRNQ--QNAVP------------LFVSNCL-------- 519
Query: 228 LATFRKAGTKSNSK-----AFAMDVAGYNNIISRFCENGLLSEAETLFEEL 273
+ + K G+ S+++ A + + ++++ + +G EA +F+E+
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 153 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 212
M+ ++ + R VT L++ L + G A +F +M+ + PP+ T+N
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIM-----TYN 55
Query: 213 IMVNECFNLGKFHEALATFRKAGTKSNS---------KAFAMDVAGYNNIISRFCENGLL 263
I+++ GK +AL AG + K +V Y +IS FC+ G
Sbjct: 56 ILLDGLCKNGKLEKALV----AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK 111
Query: 264 SEAETLFEELCSKSLSPDVPTHFACVSA 291
EA TLF ++ PD T+ + A
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRA 139
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 18 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF---- 73
+Q +V N V+Y +I G D+A E+++ +++ P +TY L G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLDGLCKNG 65
Query: 74 -----ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 128
+ AG++ + DL + KG + + Y +ISGF + G ++A LF ++KE
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 129 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 178
+ D T + +G + + K + +F T ++ ++L
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 32/170 (18%)
Query: 47 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 106
+EL+R + G + VTY L +G AG A ++ +EM++ G D + YN L+
Sbjct: 1 MELFREMSQRGLVG-NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 107 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 166
G + G L+KA G+ ++ D + SL + K
Sbjct: 60 GLCKNGKLEKA--------------------------LVAGKVEDGWDLFCSLSLKGVKP 93
Query: 167 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 216
VT ++ K G K +A+ LF +M ++ P +S T+N ++
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP-----DSGTYNTLIR 138
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 25 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 84
P++V+YN++I+ +C + ++ A +L + P +TY + G G+ +A +
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEE-TPDVITYTTVIGGLGLIGQPDKARE 302
Query: 85 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 144
+L+EM G D YN I F L A++L DE+ ++ L NAT FF
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL----SPNATTYNLFF 358
Query: 145 -------NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 195
+ GR E Y ++ + +C L+++ +H K A L++ M+
Sbjct: 359 RVLSLANDLGRSWEL---YVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 61 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 120
P VTY L + I +A L+ +M + D + Y +I G +G DKA E+
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 121 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 180
E+KE D + F R +A ++ + T N+ VL
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
Query: 181 HGKKTQAWALFDQMLDNHTPPNFQA 205
++W L+ +ML N PN Q+
Sbjct: 364 ANDLGRSWELYVRMLGNECLPNTQS 388
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 77 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER---CLVYDG 133
G++ +A L R++ NKG + +N+LI+ F++ G LD+A LF EL+E C V
Sbjct: 343 GKVKDAEHLFRQIRNKGIES----WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 134 VVNATYMEWFFN-NGRDKEAMDSYKSLMDRQFKMTPVTCN-VLLEVLLKHGKKTQAWALF 191
VV T + N GR ++++ + RQ + + V N V + +L + A L
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYF-----RQMQFSKVLANSVTICCILSICAELPALNL- 452
Query: 192 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 251
+ + H + N N +VN G E F K D+ +N
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK--------DLISWN 504
Query: 252 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSA 291
+II + +G +A ++F+ + S PD A +SA
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 119/320 (37%), Gaps = 73/320 (22%)
Query: 22 NIVPNIVSYNNVINTHCDEGRVDVALELYRHI---------------------------- 53
++ ++ SYN ++ T C GRVD+A ++Y+
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKM 389
Query: 54 ----------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 103
+ + P+ T+ L +AG + +A L EML G +S +N
Sbjct: 390 WKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNI 449
Query: 104 LISGFLELGNLDKANELFDELK----ERCLVYDGVVN---ATYMEWFFNNGR----DKEA 152
L+ +E D+A LF K L D +V+ + NNG ++ +
Sbjct: 450 LLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNS 509
Query: 153 MDSYKSLMDR-QFKMTPVTCNVLLEVL---LKHGKKTQAWALFDQMLDNHTPPNFQAVNS 208
Y R FK T T N+LL+ GK+ L D+M P N
Sbjct: 510 NSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE-----LMDEMKSLGLSP-----NQ 559
Query: 209 DTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 265
T++ +++ C G A L T AGT+ DV Y I EN L
Sbjct: 560 ITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP-------DVVAYTTAIKICAENKCLKL 612
Query: 266 AETLFEELCSKSLSPDVPTH 285
A +LFEE+ + P+ T+
Sbjct: 613 AFSLFEEMRRYQIKPNWVTY 632
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 46/292 (15%)
Query: 31 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 90
+N+I H G AL LY I + P V L R+V L E +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI-LRACACVVPRVVLGKLLHSESI 73
Query: 91 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY------------DGVV--- 135
G +D +V ++LIS + + G + A ++FDE+ ER + D V+
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 136 ----------NATYMEWFFNNGRDKEAMDSYKSLMDRQ-FKMTPVTC-NVLLEVLLKHGK 183
T++E G+ E ++ + L +R F++ V +V+L V + + K
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIE-IEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 184 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 243
A F+ + + N+ +++M++ F +G HEA A F + F
Sbjct: 193 MEDARKFFEDIPEK---------NAFVWSLMMSGYFRIGDVHEARAIFYRV--------F 235
Query: 244 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAAGGS 295
A D+ +N +I+ + +NG +A F + + PD T + +SA S
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 23/242 (9%)
Query: 2 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGP 61
+R +EA A+F+ F + ++V +N +I + G D A++ + ++ + P
Sbjct: 219 FRIGDVHEARAIFYRVFAR-----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG-YEP 272
Query: 62 SAVTYRHLTKGFISAGRIVEALDLLRE---MLN-KGHGADSLVYNNLISGFLELGNLDKA 117
AVT + +GR LD+ RE ++N +G + V N LI + + G+L+ A
Sbjct: 273 DAVTVSSILSACAQSGR----LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENA 328
Query: 118 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 177
+F+ + R + + + +G+ KEA++ + ++ K +T +L
Sbjct: 329 TSVFESISVRSV----ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 178 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 237
+ G + +F +M PN + F +++ GK EA ++ K
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQDVKPNVK-----HFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 238 SN 239
N
Sbjct: 440 PN 441
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 15/230 (6%)
Query: 64 VTYRHLTKGFISAGRIVEALDLLREM-LNKGHGADSLVYNNLISGFLELGNLDKANELFD 122
V++ + G + R EA+DL M + G D + +++S LG +D + +
Sbjct: 271 VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE 330
Query: 123 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 182
+ + +D + ++ + G + A++ + + + T N LL L HG
Sbjct: 331 YILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV----FTWNALLGGLAIHG 386
Query: 183 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 242
++ F++M+ PN TF +N C + G E F K KS
Sbjct: 387 HGLESLRYFEEMVKLGFKPNLV-----TFLAALNACCHTGLVDEGRRYFHK--MKSREYN 439
Query: 243 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHFACVSAA 292
+ Y +I C GLL EA L + + K PDV A +SA
Sbjct: 440 LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK---PDVRICGAILSAC 486
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 23 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 82
+ PN + N + C G VD ALELYR + F P+A++Y +L + + +A
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSR-SEIGFAPTAMSYNYLIHTLCANESVEQA 446
Query: 83 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 142
D+L+ +++GH ++ L + G D A EL ER L+ + +
Sbjct: 447 YDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISA 506
Query: 143 FFNNGRDKEAMDS----YKSLMDRQFKM 166
+ G+ ++A+ KS +D FKM
Sbjct: 507 LCDVGKVEDALMINELFNKSGVDTSFKM 534