Miyakogusa Predicted Gene
- Lj0g3v0282239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0282239.1 Non Chatacterized Hit- tr|I1NEQ9|I1NEQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9390
PE=,67.94,0,seg,NULL; SNF2_N,SNF2-related; Helicase_C,Helicase,
C-terminal; zf-C3HC4_2,NULL; HIRAN,HIP116, Rad5p,CUFF.18774.1
(1129 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 1161 0.0
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 893 0.0
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 360 4e-99
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 350 4e-96
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 350 5e-96
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 332 1e-90
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 330 3e-90
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 323 4e-88
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 296 5e-80
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 281 2e-75
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 256 5e-68
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 210 6e-54
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 154 3e-37
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 126 7e-29
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 124 5e-28
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 124 5e-28
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 123 6e-28
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 120 8e-27
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 119 8e-27
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 119 9e-27
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 114 6e-25
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 111 3e-24
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 110 6e-24
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 110 6e-24
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 106 1e-22
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 106 1e-22
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 105 1e-22
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 103 9e-22
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 101 3e-21
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 101 3e-21
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 101 3e-21
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 101 3e-21
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 100 4e-21
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 100 5e-21
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 100 5e-21
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 100 6e-21
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 99 1e-20
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 99 2e-20
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 99 2e-20
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 96 1e-19
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 94 6e-19
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 93 9e-19
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 91 4e-18
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 91 5e-18
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 91 5e-18
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 91 5e-18
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 91 5e-18
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 89 1e-17
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 89 2e-17
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 85 3e-16
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 84 7e-16
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 82 2e-15
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 80 1e-14
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 76 2e-13
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 74 6e-13
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 70 8e-12
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 69 2e-11
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 64 5e-10
AT1G18660.4 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 7e-07
AT1G18660.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 8e-07
AT1G18660.3 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 8e-07
AT1G18660.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 8e-07
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 1161 bits (3003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/931 (60%), Positives = 702/931 (75%), Gaps = 47/931 (5%)
Query: 210 RIPNLEDGEFPDEPGWSLLGRKVEVAISTARGVKRLVDNEIVHFNFPLPNYSYKSQW--- 266
R +EDG+FP E W L+GR + A ST++G ++L DNEIV+F F S ++W
Sbjct: 381 RKVKVEDGDFPVEKDWYLVGRSLVTATSTSKG-RKLEDNEIVNFTF-----SSVAKWKVP 434
Query: 267 -IVRISTIRSGEVGRLPMEWAKAIIPLVQSGNVKVRGRCIAAPYSLQMMQEIMLLVSFYV 325
IVR ST R GE+GRLPMEW+ + L++SG VK+ GRC+AAP L MMQEIML VSFY+
Sbjct: 435 NIVRFSTKRCGEIGRLPMEWSNWAVSLLRSGKVKMLGRCVAAPPFLTMMQEIMLYVSFYI 494
Query: 326 HSSVFTECVDTSWRLEACGNINTATYPLLTLLNMLEIKPHRKADFTPDDIDTRKRLLYRK 385
HSS+FT+ ++WR+ + N+ + +PLL L L IKP++KA+FTP+++++RKR L +
Sbjct: 495 HSSIFTDVSKSTWRIGSSPNLESTLHPLLQLFKHLTIKPYQKAEFTPEELNSRKRSLNLE 554
Query: 386 LDSDE-AAALPLVKRRKGGEPAPEQNEDEQAISESALNKIIGAAEIFDLEEKAAPRTLTC 444
D DE AA L + KRRKG + + EQN+DE+ ES +N+++GAA+ ++LEE AP TLTC
Sbjct: 555 DDYDERAALLAIAKRRKGCQQSLEQNKDEEEAPESYMNRVVGAADSYNLEEMEAPSTLTC 614
Query: 445 ELKPYQSQALYWMSEIEKGIDISNAESNLHPCWSAYNICNGR--SIYVNIFTGEATNKFP 502
L+PYQ QALYWMSE EKGID+ A LHPCW AY IC+ R SIY+NIF+GEAT +FP
Sbjct: 615 NLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYLNIFSGEATIQFP 674
Query: 503 KATKMARGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKN---AS 559
AT+MARGGILADAMGLGKTVMTIALIL+ PGR N + + N RK A
Sbjct: 675 TATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMAL 734
Query: 560 ISNNVQGGTLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTT 619
+ +GGTLI+CPMALL QWKDELETHS ++S+ V+YGG RT+ A+ I+ +DVVLTT
Sbjct: 735 TTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTT 794
Query: 620 YGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPI 679
YGVL++A++ D NSI+H+I WYR+VLDEAH IK+ K+Q A+A F LSSHCRWCLTGTP+
Sbjct: 795 YGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPL 854
Query: 680 QNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETE 739
QN LEDL+SLL FL EPWC+WAWW KL+Q+PYEN DPR LKL+K ILR LMLRRTKET
Sbjct: 855 QNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETR 914
Query: 740 DKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDL 799
DK G IL LPPTD+++IECEQSE+ERDFY ALF RSKVQFDQ+VAQGKVLH+YANIL+L
Sbjct: 915 DKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILEL 974
Query: 800 LMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTNTESSDICAPSDPQQHAELNRLAS 859
L++LR+CCNHPFLV+ + +D QQ+A+L+ LA
Sbjct: 975 LLRLRQCCNHPFLVM-----------------------------SRADSQQYADLDSLAR 1005
Query: 860 RFLQNC-DSASNSIQSRGYIDEVLEHIQKGDTVECSICMDSPDDPVFTPCAHRFCRECLF 918
RFL N DS S + SR YI+EV++ ++ G++ EC IC++S DDPV TPCAHR CRECL
Sbjct: 1006 RFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLL 1065
Query: 919 NCWGNSAGGNCPICRQSLLKSDLITCPSESPFKVDIENNMTESSKVSELMKYLERIQMS- 977
W + + G CPICR L +++LI+CP++S F+VD+ N ESSKVSEL+K LE+I+ S
Sbjct: 1066 TSWRSPSCGLCPICRTILKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSG 1125
Query: 978 TDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMS 1037
+ EKSIVFSQWTSF DLLE PLR RG +LRF GKL QK REKVL EFN+T +K +LLMS
Sbjct: 1126 SGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMS 1185
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQ 1097
LKAGGVGLNLTAAS+VFLMDPWWNPAVEEQAIMRIHRIGQKR V VRRFIVK+TVE R+Q
Sbjct: 1186 LKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQ 1245
Query: 1098 QVQARKQMMISGALTDDEVRSARIHDLKILF 1128
QVQARKQ MI+GALTD+EVRSAR+ +LK+LF
Sbjct: 1246 QVQARKQRMIAGALTDEEVRSARLEELKMLF 1276
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/950 (48%), Positives = 621/950 (65%), Gaps = 75/950 (7%)
Query: 225 WSLLGRKVEVAISTARGVKRLVDNEIVHFNFP-------------------LPNYSYKSQ 265
W +G +ST +G K +E+V F FP P S
Sbjct: 110 WWFVGCSELAGLSTCKGRKLKSGDELV-FTFPHSKGLKPETTPGKRGFGRGRPALRGASD 168
Query: 266 WIVRISTIRSGEVGRLPMEWAKAIIPLVQSGNVKVRGRCIAAPYSLQMMQEIMLLVSFYV 325
IVR ST SGE+GR+P EWA+ ++PLV+ +++ G C +AP +L +M I+L VS Y+
Sbjct: 169 -IVRFSTKDSGEIGRIPNEWARCLLPLVRDKKIRIEGSCKSAPEALSIMDTILLSVSVYI 227
Query: 326 HSSVFTECVDTSWRLEACGNINTATYPLLTLLNMLEIKPHRKADFTPDDIDTRKRLLYRK 385
+SS+F + TS++ + + +PL L +L + P +KA+FTP+D ++KR L K
Sbjct: 228 NSSMFQKHSATSFKTASNTAEESMFHPLPNLFRLLGLIPFKKAEFTPEDFYSKKRPLSSK 287
Query: 386 LDSDEAAALPLVKRRKGGEPAPEQNEDEQAISESALNKIIGAAEIFDLEEKAAPRTLTCE 445
S +L + + K +E+EQ IS+ L+ I+G + L+E P TL CE
Sbjct: 288 DGSAIPTSLLQLNKVKNMNQDANGDENEQCISDGDLDNIVGVGDSSGLKEMETPHTLLCE 347
Query: 446 LKPYQSQALYWMSEIEKGIDISNAESNLHPCWSAYNICNGRS--IYVNIFTGEATNKFPK 503
L+PYQ QAL+WM+++EKG A + LHPCW AY + + R +Y+N FTG+AT FP
Sbjct: 348 LRPYQKQALHWMTQLEKGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPS 407
Query: 504 ATKMARGGILADAMGLGKTVMTIALILSNPGRSKI---------GNNFIDGVNDNIIT-- 552
+MARGGILADAMGLGKTVMTI+L+L++ ++ G+ I D++ +
Sbjct: 408 TLQMARGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPP 467
Query: 553 ---------NKRKNASISNNVQGGTLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGR 603
+KR S GG LIVCPM LLGQWK E+E H+ S+S++VHYG R
Sbjct: 468 VKATKFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSR 527
Query: 604 TNSAELISEYDVVLTTYGVLSAAFRSDGENSIYHK----IQWYRVVLDEAHHIKAHKSQV 659
A+L+S+ DVV+TTYGVL++ F ENS H+ ++W+R+VLDEAH IK KSQ+
Sbjct: 528 PKDAKLLSQSDVVITTYGVLTSEFSQ--ENSADHEGIYAVRWFRIVLDEAHTIKNSKSQI 585
Query: 660 AQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRA 719
+ AA AL + RWCLTGTPIQN+LEDL+SLL FL EPW +WAWW+KLVQ+P+E D R
Sbjct: 586 SLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERG 645
Query: 720 LKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQ 779
LKLV+ IL+ +MLRRTK + D+ GRPILVLPP D ++I CE SESERDFYDALF RSKV+
Sbjct: 646 LKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVK 705
Query: 780 FDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTNTES 839
FDQ+V QGKVLH+YA+IL+LL++LR+CC+HPFLV+ + +Y+DL++L+++FL +
Sbjct: 706 FDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKS-- 763
Query: 840 SDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSICMDS 899
+ + S ++ EV+E ++KG+ EC IC+++
Sbjct: 764 -----------------------SGLEREGKDVPSEAFVQEVVEELRKGEQGECPICLEA 800
Query: 900 PDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCPSESPFKVDIENNMT 959
+D V TPCAHR CRECL W NS G CP+CR ++ K +LIT P+ES F+VD+E N
Sbjct: 801 LEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELITAPTESRFQVDVEKNWV 860
Query: 960 ESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQRE 1019
ESSK++ L++ LE ++ S+ KSI+FSQWT+F DLL+ PL ++R G L+Q+QRE
Sbjct: 861 ESSKITALLEELEGLR-SSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQRE 919
Query: 1020 KVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKR 1079
KVL EF++ VLLMSLKAGGVG+NLTAASN F+MDPWWNPAVEEQA+MRIHRIGQ +
Sbjct: 920 KVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTK 979
Query: 1080 KVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDEVRSARIHDLKILFS 1129
+V +RRFIVK TVE R++ VQARKQ MISGALTD EVRSARI +LK+LF+
Sbjct: 980 EVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT 1029
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 360 bits (923), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 236/725 (32%), Positives = 363/725 (50%), Gaps = 101/725 (13%)
Query: 439 PR-TLTCELKPYQSQALYWMSEIEKGIDISNAESNLHPCWSAYNICNGRSIYVNIFTGEA 497
PR + EL +Q + L W+ EK L P W + ++N T
Sbjct: 204 PREVIKSELFAHQKEGLGWLLHREKS-------GELPPFWEEKD-----GEFLNTLTNYR 251
Query: 498 TNKFPKATKMARGGILADAMGLGKTVMTIALI----LSNPGRSKIGNNFIDGVNDNI--- 550
++K P RGG+ AD MGLGKT+ ++LI N S +DG D I
Sbjct: 252 SDKRPDPL---RGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKK 308
Query: 551 ------------ITNKR--KNASISNNV-QGGTLIVCPMALLGQWKDELETHSAIRSISI 595
+T K+ + + NV Q TLIVCP +++ W +LE H+ + +
Sbjct: 309 GKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKV 368
Query: 596 FVHYGGGRTNSAELISEYDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAH 655
++++GG RT+ + +YD+VLTTYG L A E+S K++W R++LDEAH IK
Sbjct: 369 YMYHGGERTDDVNELMKYDIVLTTYGTL--AVEESWEDSPVKKMEWLRIILDEAHTIKNA 426
Query: 656 KSQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENN 715
+Q ++ L + RW +TGTPIQN DL+SL+ FL EP+ ++W L+QRP
Sbjct: 427 NAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQG 486
Query: 716 DPRALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTR 775
+ + L ++ ++ T+ LRRTKE + ++ LPP ++ E S ER YD +
Sbjct: 487 NKKGLSRLQVLMATISLRRTKE------KSLIGLPPKTVETCYVELSPEERQLYDHMEGE 540
Query: 776 SKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQT 835
+K + G ++ +Y+ +L ++++LR+ C+ D+S
Sbjct: 541 AKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD---------------DMS--------- 576
Query: 836 NTESSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSI 895
+C P EL R S + + +++ +Q G+ +C I
Sbjct: 577 ------LCPP-------EL-----RSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPI 618
Query: 896 CMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCPSESPFKVDIE 955
C+ P + + T CAH FCR C+ S CP+CR SL +SDL P P + +
Sbjct: 619 CISPPTNIIITRCAHIFCRACILQTLQRSK-PLCPLCRGSLTQSDLYNAPPPPPDSSNTD 677
Query: 956 NNMTESSKVSELMKYLERIQMST-----DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFH 1010
+SS S + L + M++ + KS+VFSQ+ LLE PL++ G LR
Sbjct: 678 GEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLD 737
Query: 1011 GKLTQKQREKVLDEFN--KTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQA 1068
G +T K+R +V+ EF + + VLL SLKA G G+NLTAAS V+L DPWWNPAVEEQA
Sbjct: 738 GAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQA 797
Query: 1069 IMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGAL----TDDEVRSARIHDL 1124
+ RIHRIGQK++V + R I +N++E R+ ++Q +K+ + + A DE R + D+
Sbjct: 798 MDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDE-REVNVEDV 856
Query: 1125 KILFS 1129
L S
Sbjct: 857 VALMS 861
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 350 bits (897), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 250/768 (32%), Positives = 361/768 (47%), Gaps = 200/768 (26%)
Query: 498 TNKFPKATKMARGGILADAMGLGKTVMTIALIL---SNP--------------------- 533
T+ FP GGILAD GLGKTV TIALIL S P
Sbjct: 414 TSGFP-----CSGGILADDQGLGKTVSTIALILKERSKPAQACEESTKKEIFDLESETGE 468
Query: 534 -------GRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPMALLGQWKDELET 586
GRSK + N+N + ++ GTL+VCP +++ QW DEL
Sbjct: 469 CAPLKPSGRSKHFEHSQLLSNENKVGGDSV-GKVTGRPAAGTLVVCPTSVMRQWADEL-- 525
Query: 587 HSAIRS---ISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAF-------RSDGENSIY 636
H + S +S+ V++G RT +++YDVV+TT+ ++S D E
Sbjct: 526 HKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGV 585
Query: 637 H---------------------------------------KIQWYRVVLDEAHHIKAHKS 657
H K+ W+RVVLDEA IK +K+
Sbjct: 586 HDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKT 645
Query: 658 QVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDP 717
QVA+A + L + RWCL+GTPIQNS++DL+S FL +P+ S+ + ++ P N
Sbjct: 646 QVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPV 705
Query: 718 RALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSK 777
+ + ++ IL+T+MLRRTK + G+PI+ LPP I+L + + + ERDFY L S+
Sbjct: 706 KGYQKLQAILKTVMLRRTKGSLLD-GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESR 764
Query: 778 VQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTNT 837
QF +Y G V +Y NIL +L++LR+ C+HP LV G + LA+K +Q++
Sbjct: 765 TQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV-NGEYSFTWESSVGLAKKQIQSD- 822
Query: 838 ESSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSICM 897
AS +I C IC
Sbjct: 823 ------------------------------ASLAI--------------------CGICN 832
Query: 898 DSPDDPVFTPCAHRFCRECLFN-CWGNSAGGNCPI--CRQSLLKSDLIT----------- 943
D+P+D V + C H FC++C++ G+S +CP C L S L +
Sbjct: 833 DAPEDAVASVCGHVFCKQCIYERLTGDS--NHCPFANCNVRLTISSLSSKTRLDDAMPDM 890
Query: 944 -----------CPSE------SPFKVDIE--------NNMTESSKVSELMKY-------L 971
C E S K +E +++T+S+++SE +Y +
Sbjct: 891 QERATSNSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPV 950
Query: 972 ERIQMSTD-------EKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDE 1024
+ MS D EK+IVFSQWT +LLE L S I Y R G ++ R+K + +
Sbjct: 951 KNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQD 1010
Query: 1025 FNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVR 1084
FN E V++MSLKA +GLN+ AA +V ++D WWNP E+QAI R HRIGQ R V V
Sbjct: 1011 FNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVV 1070
Query: 1085 RFIVKNTVEARLQQVQARKQMMISGALTDDEVRSARIH----DLKILF 1128
RF VK+TVE R+ +Q +K+MM++ A +DE S + H DL LF
Sbjct: 1071 RFTVKDTVEDRILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLF 1118
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 350 bits (897), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 248/766 (32%), Positives = 360/766 (46%), Gaps = 196/766 (25%)
Query: 498 TNKFPKATKMARGGILADAMGLGKTVMTIALIL---SNP--------------------- 533
T+ FP GGILAD GLGKTV TIALIL S P
Sbjct: 572 TSGFP-----CSGGILADDQGLGKTVSTIALILKERSKPAQACEESTKKEIFDLESETGE 626
Query: 534 -------GRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPMALLGQWKDELET 586
GRSK + N+N + ++ GTL+VCP +++ QW DEL
Sbjct: 627 CAPLKPSGRSKHFEHSQLLSNENKVGGDSV-GKVTGRPAAGTLVVCPTSVMRQWADEL-- 683
Query: 587 HSAIRS---ISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAF-------RSDGENSIY 636
H + S +S+ V++G RT +++YDVV+TT+ ++S D E
Sbjct: 684 HKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGV 743
Query: 637 H---------------------------------------KIQWYRVVLDEAHHIKAHKS 657
H K+ W+RVVLDEA IK +K+
Sbjct: 744 HDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKT 803
Query: 658 QVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDP 717
QVA+A + L + RWCL+GTPIQNS++DL+S FL +P+ S+ + ++ P N
Sbjct: 804 QVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPV 863
Query: 718 RALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSK 777
+ + ++ IL+T+MLRRTK + G+PI+ LPP I+L + + + ERDFY L S+
Sbjct: 864 KGYQKLQAILKTVMLRRTKGSLLD-GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESR 922
Query: 778 VQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTNT 837
QF +Y G V +Y NIL +L++LR+ C+HP LV G + LA+K +Q++
Sbjct: 923 TQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV-NGEYSFTWESSVGLAKKQIQSD- 980
Query: 838 ESSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSICM 897
AS +I C IC
Sbjct: 981 ------------------------------ASLAI--------------------CGICN 990
Query: 898 DSPDDPVFTPCAHRFCRECLFN-CWGNSAG---GNC-------------------PICRQ 934
D+P+D V + C H FC++C++ G+S NC P ++
Sbjct: 991 DAPEDAVASVCGHVFCKQCIYERLTGDSNHCPFANCNVRLTISSLSSKTRLDDAMPDMQE 1050
Query: 935 SLLKSDLITCPSE------SPFKVDIE--------NNMTESSKVSELMKY-------LER 973
+ L C E S K +E +++T+S+++SE +Y ++
Sbjct: 1051 RATSNSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKN 1110
Query: 974 IQMSTD-------EKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFN 1026
MS D EK+IVFSQWT +LLE L S I Y R G ++ R+K + +FN
Sbjct: 1111 EGMSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFN 1170
Query: 1027 KTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRF 1086
E V++MSLKA +GLN+ AA +V ++D WWNP E+QAI R HRIGQ R V V RF
Sbjct: 1171 TLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRF 1230
Query: 1087 IVKNTVEARLQQVQARKQMMISGALTDDEVRSARIH----DLKILF 1128
VK+TVE R+ +Q +K+MM++ A +DE S + H DL LF
Sbjct: 1231 TVKDTVEDRILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLF 1276
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 241/775 (31%), Positives = 352/775 (45%), Gaps = 200/775 (25%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKI-----GNNFIDGVN-------DNIITNKRKN 557
GGILAD GLGKTV TIALIL +K+ GN + ++ +N
Sbjct: 249 GGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKPESK 308
Query: 558 ASISNNVQG--------------------------GTLIVCPMALLGQWKDELETHSAIR 591
AS + V G GTLIVCP +++ QW EL+
Sbjct: 309 ASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDE 368
Query: 592 S-ISIFVHYGGGRTNSAELISEYDVVLTTYGVLS-------------------------- 624
+ +S+ +++GG RT +++YDVV+TTY ++S
Sbjct: 369 AKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDDENDEKNSEKYGLAS 428
Query: 625 --------------------------AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQ 658
A SD ++ K+ W+RVVLDEA IK H++Q
Sbjct: 429 GFSINKKRKNVVGTTKKSKKKKGNNNAGDSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQ 488
Query: 659 VAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPR 718
VA+A L + RWCL+GTPIQN+++DL+S FL +P+ + + ++ P N +
Sbjct: 489 VARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFCHQIKGPISRNSLQ 548
Query: 719 ALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKV 778
K ++ +LR +MLRRTK T G+PI+ LPP I L + + S ER FY L + S+
Sbjct: 549 GYKKLQAVLRAIMLRRTKGTLLD-GQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRS 607
Query: 779 QFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTNTE 838
QF Y A G + +YANIL +L++LR+ C+HP LV N +S A K L
Sbjct: 608 QFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVK-RYNSDSVGKVSEEAVKKL----- 661
Query: 839 SSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSICMD 898
P++ +L L SR S+ I C +C D
Sbjct: 662 ---------PKE--DLVSLLSRL------ESSPI--------------------CCVCHD 684
Query: 899 SPDDPVFTPCAHRFCRECLFN-CWGNSAGGNCPICRQSLL------KSDLITCPSE---- 947
P+DPV T C H FC +C+ + G+ P CR+ L KS L +C ++
Sbjct: 685 PPEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSKSTLRSCVADDLGC 744
Query: 948 ------SPFKVDIENNMTESSKVSELMKYLERI------------QMSTDE--------- 980
S K +N SSK+ ++ L+ + QM++
Sbjct: 745 SSSEDNSHDKSVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDD 804
Query: 981 -----------------------KSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQ 1017
K+I+FSQWT DL+E L I + R G ++
Sbjct: 805 DDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIA 864
Query: 1018 REKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQ 1077
R++ + EF+ + +V++MSLKAG +GLN+ AA +V L+D WWNP E+QAI R HRIGQ
Sbjct: 865 RDRAVKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQ 924
Query: 1078 KRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDEVRSA----RIHDLKILF 1128
R V V R +KNTVE R+ +Q K+ M++ A +D S+ + DLK LF
Sbjct: 925 TRPVTVTRITIKNTVEDRILALQEEKRKMVASAFGEDHGGSSATRLTVDDLKYLF 979
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 330 bits (847), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 237/684 (34%), Positives = 348/684 (50%), Gaps = 89/684 (13%)
Query: 510 GGILADAMGLGKTVMTIALIL---SNPGRSKIGNNFIDGVNDN----IITNKRKNASIS- 561
GGILAD GLGKTV TIALIL S P ++ G N + ++ N+ K S
Sbjct: 565 GGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSL 624
Query: 562 ----NNVQGGTLIVCPMALLGQWKDELETHSAIRS-ISIFVHYGGGRTNSAELISEYDVV 616
GTLIVCP +L+ QW DEL + + +S+ V++G RT +++YDVV
Sbjct: 625 CKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVV 684
Query: 617 LTTYGVLSAAFRSDGE-----NSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCR 671
+TTY ++S D E + ++ W+RVVLDEA IK +K+Q + A L + R
Sbjct: 685 ITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRR 744
Query: 672 WCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLM 731
WCL+GTPIQNS+ DL+S FL +P+ S+ + + ++ P + K ++ IL+ +M
Sbjct: 745 WCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVM 804
Query: 732 LRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLH 791
LRRTK+T G+P++ LPP I+L + ++ ERDFY L S+ QF +Y G V
Sbjct: 805 LRRTKDTLLD-GKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQ 863
Query: 792 HYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARK---FLQTNTESS----DIC- 843
+Y NIL +L++LR+ C HP LV S + +L + FL E+S IC
Sbjct: 864 NYVNILLMLLRLRQACGHPLLVSSLSWSSSAEMVKKLPYEKLTFLLHRLEASLAICGICN 923
Query: 844 -APSDPQQHAELNRLASRFLQNCDSASN---------------SIQSRGYIDEVLEHIQK 887
AP D + ++ + C + N S+ SR ++ + + K
Sbjct: 924 VAPKDAVVSLCGHVFCNQCICECLTRDNNQCPLSYCKVGLEISSLFSRETLENAMLDLHK 983
Query: 888 GDTVECSICMDSPDDPVFT--PCAHRFCRECLFNCWGNSAGGNCPICRQSLLKS--DLIT 943
D + C + DPV + PC N P C S +K+ D++
Sbjct: 984 LD----APCDRTTSDPVGSGEPCE------------------NLP-CGSSKIKAALDILQ 1020
Query: 944 CPSESPFKVDIENNMTESSKVSELMKYLERIQM--STDEKSIV-------------FSQW 988
S + N++ +SS+ E + L++ +T KS V F+QW
Sbjct: 1021 SLSRPQSPATVMNDVNQSSENGENNQQLDKSFSLPATPAKSSVGGVVNVAGEKAIVFTQW 1080
Query: 989 TSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLT 1048
T DLLE L+S GI Y RF GK+T R+ + +FN + V++MSLKA +GLN+
Sbjct: 1081 TKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKAASLGLNMV 1140
Query: 1049 AASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMIS 1108
AA +V ++D WWNP E+QAI R HRIGQ R V V RF VK+TVE R+ +Q +K+ M++
Sbjct: 1141 AACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQQKKRKMVA 1200
Query: 1109 GALTDDEVRSARIH----DLKILF 1128
A + E S H DL LF
Sbjct: 1201 SAFGEHENGSRESHLSVEDLNYLF 1224
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 323 bits (829), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 239/728 (32%), Positives = 351/728 (48%), Gaps = 133/728 (18%)
Query: 510 GGILADAMGLGKTVMTIALIL---SNPGRSKIGNNFIDGVNDN----IITNKRKNASIS- 561
GGILAD GLGKTV TIALIL S P ++ G N + ++ N+ K S
Sbjct: 564 GGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSL 623
Query: 562 ----NNVQGGTLIVCPMALLGQWKDELETHSAIRS-ISIFVHYGGGRTNSAELISEYDVV 616
GTLIVCP +L+ QW DEL + + +S+ V++G RT +++YDVV
Sbjct: 624 CKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVV 683
Query: 617 LTTYGVLSAAF------RSDGENSIYH--------------------------------- 637
+TTY ++S R+D E H
Sbjct: 684 ITTYSLVSVEVPKQPRDRADEEKGGIHDGGVESVGFGSNKKDLPNSQKKGTKKRKHMDCE 743
Query: 638 ----------KIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
++ W+RVVLDEA IK +K+Q + A L + RWCL+GTPIQNS+ DL+
Sbjct: 744 PVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLY 803
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
S FL +P+ S+ + + ++ P + K ++ IL+ +MLRRTK+T G+P++
Sbjct: 804 SYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLD-GKPVI 862
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP I+L + ++ ERDFY L S+ QF +Y G V +Y NIL +L++LR+ C
Sbjct: 863 SLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQAC 922
Query: 808 NHPFLVLCGSNPQKYADLSRLARK---FLQTNTESS----DIC--APSDPQQHAELNRLA 858
HP LV S + +L + FL E+S IC AP D +
Sbjct: 923 GHPLLVSSLSWSSSAEMVKKLPYEKLTFLLHRLEASLAICGICNVAPKDAVVSLCGHVFC 982
Query: 859 SRFLQNCDSASN---------------SIQSRGYIDEVLEHIQKGDTVECSICMDSPDDP 903
++ + C + N S+ SR ++ + + K D + C + DP
Sbjct: 983 NQCICECLTRDNNQCPLSYCKVGLEISSLFSRETLENAMLDLHKLD----APCDRTTSDP 1038
Query: 904 VFT--PCAHRFCRECLFNCWGNSAGGNCPICRQSLLKS--DLITCPSESPFKVDIENNMT 959
V + PC N P C S +K+ D++ S + N++
Sbjct: 1039 VGSGEPCE------------------NLP-CGSSKIKAALDILQSLSRPQSPATVMNDVN 1079
Query: 960 ESSKVSELMKYLER---------------IQMSTDEKSIVFSQWTSFFDLLENPLRSRGI 1004
+SS+ E + L++ + EK+IVF+QWT DLLE L+S GI
Sbjct: 1080 QSSENGENNQQLDKSFSLPATPAKSSVGGVVNVAGEKAIVFTQWTKMLDLLEAGLKSSGI 1139
Query: 1005 GYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAV 1064
Y RF GK+T R+ + +FN + V++MSLKA +GLN+ AA +V ++D WWNP
Sbjct: 1140 QYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTT 1199
Query: 1065 EEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDEVRSARIH-- 1122
E+QAI R HRIGQ R V V RF VK+TVE R+ +Q +K+ M++ A + E S H
Sbjct: 1200 EDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLS 1259
Query: 1123 --DLKILF 1128
DL LF
Sbjct: 1260 VEDLNYLF 1267
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 296 bits (759), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 230/790 (29%), Positives = 353/790 (44%), Gaps = 219/790 (27%)
Query: 510 GGILADAMGLGKTVMTI-----------------------ALILSNPGRS---------- 536
GGILAD GLGKTV TI AL+L S
Sbjct: 304 GGILADDQGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNAKHESGSH 363
Query: 537 -----KIGNNFIDGV--------NDNIITNKRKNASISNNVQG--------GTLIVCPMA 575
K+ +N V ND+ K ++ +++ + GTLIVCP +
Sbjct: 364 VKPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPAAGTLIVCPAS 423
Query: 576 LLGQWKDELETHSAIRS-ISIFVHYGGGRTNSAELISEYDVVLTTYGV------------ 622
++ QW EL+ + S +S+ V++G RT ++EYDVV+TTY +
Sbjct: 424 VVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNEAPNKFLVD 483
Query: 623 -------------LSAAFRSDGENSI---------------------------YHKIQWY 642
L++ F ++ + + K+ W+
Sbjct: 484 EDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEPDCGPLGKVGWF 543
Query: 643 RVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWA 702
R+VLDEA IK +++Q+A++ L + RWCL+GTPIQN+++DL+S FL +P+ +
Sbjct: 544 RIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVYK 603
Query: 703 WWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQS 762
++ ++ P N + K ++ +LR +MLRRTK T G+PI+ LPP + L + + S
Sbjct: 604 SFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLD-GKPIINLPPKVVNLSQVDFS 662
Query: 763 ESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKY 822
+ER FY L S+ QF Y G + +YANIL LL++LR+ C+HP LV ++Y
Sbjct: 663 VAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV------KRY 716
Query: 823 ADLSRLARKFLQTNTESSDICAPSDPQQHAELNRLA----SRFLQNCDSASNSIQSRGYI 878
+SD P A + RL SR + +S+S
Sbjct: 717 ----------------NSD---PVGKVSEAAVRRLPREARSRLINRLESSS--------- 748
Query: 879 DEVLEHIQKGDTVECSICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPI--CRQSL 936
C C + P+ PV T C H FC EC+ + CP+ C+Q L
Sbjct: 749 ------------AICYECNEPPEKPVVTLCGHIFCYECVLE-YITGDENTCPVPRCKQQL 795
Query: 937 LK------SDLITCPSESPFKVDIENNMTE----------SSKVSELMKYLERI------ 974
+ S L C S+ +N + SSK+ ++ L+ +
Sbjct: 796 ARDVVFSESSLRNCTSDDSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSLSQPDSP 855
Query: 975 ------QMSTDE--------------------------KSIVFSQWTSFFDLLENPLRSR 1002
QM + K+I+FSQWT DL+E +
Sbjct: 856 NSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVELRILES 915
Query: 1003 GIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNP 1062
GI + R G ++ R++ + EF+K + +V+LMSLKAG +GLN+ AA +V L+D WWNP
Sbjct: 916 GIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNP 975
Query: 1063 AVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDEVRSA--- 1119
E+QAI R HRIGQ R V V R +K+TVE R+ ++Q K+ M++ A ++ S+
Sbjct: 976 TTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTMVASAFGEEHGGSSATR 1035
Query: 1120 -RIHDLKILF 1128
+ DLK LF
Sbjct: 1036 LTVDDLKYLF 1045
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 301/636 (47%), Gaps = 138/636 (21%)
Query: 500 KFPKATKMARGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNAS 559
K K ++ GGILAD GLGKT+ TI+LIL +S+ G N
Sbjct: 66 KKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQN------------ 113
Query: 560 ISNNVQGGTLIVCPMALLGQWKDEL-ETHSAIRSISIFVHYGGGRTNSAELISEYDVVLT 618
GGTLIVCP +++ QW E+ E S +S+ VH+G RT I+ YDVV+T
Sbjct: 114 -----SGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMT 168
Query: 619 TYGVLSA------------AFRS----DGENSI------YHKIQWYRVVLDEAHHIKAHK 656
TY +++ + R DG + I +++W RVVLDEAH IK H+
Sbjct: 169 TYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHR 228
Query: 657 SQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENND 716
+ +A+A F+L + RWCLTGTPI+N ++DL+S FL P+ +H+ ++ P +
Sbjct: 229 TLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKP 288
Query: 717 PRALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRS 776
K ++ ILR +MLRRTKE FY L S
Sbjct: 289 LHGYKKLQAILRGIMLRRTKEWS----------------------------FYRKLELNS 320
Query: 777 KVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFLQTN 836
+ +F++Y A G + H A +L +L++LR+ CNHP LV N ++D +R
Sbjct: 321 RWKFEEYAADGTLHEHMAYLLVMLLRLRQACNHPQLV----NGYSHSDTTR--------- 367
Query: 837 TESSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVECSIC 896
+ ++ R+A R N I ++D + K + CS+C
Sbjct: 368 -------------KMSDGVRVAPR--------ENLIM---FLD-----LLKLSSTTCSVC 398
Query: 897 MDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICR-QSLLKSDLITCPSESPFKVDIE 955
D P DPV T C H FC EC+ + N CP S LK D++
Sbjct: 399 SDPPKDPVVTLCGHVFCYECV-SVNINGDNNTCPALNCHSQLKHDVV------------- 444
Query: 956 NNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQ 1015
TES+ S + Y + D+ ++V S+ F +ENP R +
Sbjct: 445 --FTESAVRSCINDYDD----PEDKNALVASRRVYF---IENPSCDRDSSV----ACRAR 491
Query: 1016 KQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRI 1075
+ R + + + +LMSLKAG +GLN+ AAS+V L+D WWNP E+QAI R HRI
Sbjct: 492 QSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRI 551
Query: 1076 GQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGAL 1111
GQ R V V R +KNTVE R+ + RK+ +++ AL
Sbjct: 552 GQTRAVTVTRIAIKNTVEERILTLHERKRNIVASAL 587
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 256 bits (655), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 266/540 (49%), Gaps = 90/540 (16%)
Query: 630 DGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSL 689
D E S+ H ++W R++LDEAH+IK +S A+A FAL + RW L+GTP+QN + +L+SL
Sbjct: 343 DKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSL 402
Query: 690 LHFLGAEPWCSW-----------------------------AWWHKLVQRPYE-----NN 715
+ FL P+ + WW+K V +P
Sbjct: 403 IRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGL 462
Query: 716 DPRALKLVK-GILRTLMLRRTKETEDKYGRPI-LVLPPTDIKLIECEQSESERDFYDALF 773
RA+ L+K +L+ ++LRRT K GR L LPP I L E D+Y++L+
Sbjct: 463 GKRAMILLKHKVLKDILLRRT-----KLGRAADLALPPRIITLRRDTLDVKEFDYYESLY 517
Query: 774 TRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKFL 833
S+ +F+ Y+ G ++++YA+I DLL +LR+ +HP+LV+ Y++ S +
Sbjct: 518 KNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVV-------YSNSSGANANLV 570
Query: 834 QTNTESSDICAPSDPQQHAELNRLASRFLQNCDSASNSIQSRGYIDEVLEHIQKGDTVEC 893
N + DP + + A F + C
Sbjct: 571 DENKSEQECGLCHDPAEDYVVTSCAHVFCK----------------------------AC 602
Query: 894 SICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSL--LKSDLITCPSESPFK 951
I + V P C + L W A + +L ++ I + K
Sbjct: 603 LIGFSASLGKVTCPT----CSKLLTVDWTTKADTEHKASKTTLKGFRASSIL----NRIK 654
Query: 952 VDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHG 1011
+D T+ + E ++++ ++ K+IVFSQ+TSF DL+ L G+ ++ G
Sbjct: 655 LDDFQTSTKIEALREEIRFM--VERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVG 712
Query: 1012 KLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMR 1071
+T R+ +++F + + RV LMSLKAGGV LNLT AS+VF+MDPWWNPAVE QA R
Sbjct: 713 SMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDR 772
Query: 1072 IHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDEVRSARI--HDLKILFS 1129
IHRIGQ + + V RFI++NTVE R+ ++Q +K+++ G + + ++ D++ LF+
Sbjct: 773 IHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLFT 832
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 510 GGILADAMGLGKTVMTIALILS--NPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGG 567
GGILAD MG+GKT+ I+L+L+ R++ G G
Sbjct: 159 GGILADEMGMGKTIQAISLVLARREVDRAQFGE-----------------------AAGC 195
Query: 568 TLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAF 627
TL++CP+ + QW +E+ ++ S + V++G R + + YD VLTTY + + +
Sbjct: 196 TLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFMNYDFVLTTYSTVESEY 255
Query: 628 RSD 630
R +
Sbjct: 256 RRN 258
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 210 bits (534), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 195/396 (49%), Gaps = 89/396 (22%)
Query: 498 TNKFPKATKMARGGILADAMGLGKTVMTIALIL---SNP--------------------- 533
T+ FP GGILAD GLGKTV TIALIL S P
Sbjct: 579 TSGFP-----CSGGILADDQGLGKTVSTIALILKERSKPAQACEESTKKEIFDLESETGE 633
Query: 534 -------GRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPMALLGQWKDELET 586
GRSK + N+N + ++ GTL+VCP +++ QW DEL
Sbjct: 634 CAPLKPSGRSKHFEHSQLLSNENKVGGDSV-GKVTGRPAAGTLVVCPTSVMRQWADEL-- 690
Query: 587 HSAIRS---ISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAF-------RSDGENSIY 636
H + S +S+ V++G RT +++YDVV+TT+ ++S D E
Sbjct: 691 HKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGV 750
Query: 637 H---------------------------------------KIQWYRVVLDEAHHIKAHKS 657
H K+ W+RVVLDEA IK +K+
Sbjct: 751 HDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKT 810
Query: 658 QVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDP 717
QVA+A + L + RWCL+GTPIQNS++DL+S FL +P+ S+ + ++ P N
Sbjct: 811 QVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPV 870
Query: 718 RALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSK 777
+ + ++ IL+T+MLRRTK + G+PI+ LPP I+L + + + ERDFY L S+
Sbjct: 871 KGYQKLQAILKTVMLRRTKGSLLD-GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESR 929
Query: 778 VQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLV 813
QF +Y G V +Y NIL +L++LR+ C+HP LV
Sbjct: 930 TQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 965
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 164/328 (50%), Gaps = 40/328 (12%)
Query: 509 RGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGT 568
RGGILAD MG+GKT+ I+L+L+ + + + S G T
Sbjct: 154 RGGILADEMGMGKTIQAISLVLAR---------------------REVDRAKSREAVGHT 192
Query: 569 LIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAFR 628
L++ P L QW DE+ ++ S + ++G R + + + YD VLTT ++ +R
Sbjct: 193 LVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYR 252
Query: 629 SDG----ENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLE 684
D S H I+W R+++DEAH IK S+ A+A FAL + RW L+GTP+QN ++
Sbjct: 253 KDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVD 312
Query: 685 DLFSLLHF----LGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETED 740
+L+SL+ + + S+A+ H + + N + IL + R +
Sbjct: 313 ELYSLVSYSFLNFFYSTYASFAFRHTHIT--FARNVTVKFLIGGNILPLSIPVRIENV-- 368
Query: 741 KYGRPILVLPPTDIKLIECEQ---SESERDFYDALFTRSKVQFDQYVAQGKVLHHYANIL 797
P +++ + L + S E DFY++L+ SK FD Y+ G ++++YA+I
Sbjct: 369 ----PAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIF 424
Query: 798 DLLMQLRRCCNHPFLVLCGSNPQKYADL 825
LL++LR+ +HP+LV S A+L
Sbjct: 425 GLLIRLRQAVDHPYLVSYSSPSGANANL 452
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 101/152 (66%), Gaps = 3/152 (1%)
Query: 981 KSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKA 1040
K+IVFSQ+TSF DL+ L G+ ++ G +++ ++ L F + + RVLLMSL+A
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586
Query: 1041 GGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQ 1100
GGV LNLTAAS+VF+MDPWWNPAVE QA RIHRIGQ + V V RFI++ TVE ++ +Q
Sbjct: 587 GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQ 646
Query: 1101 ARKQMMISGALTDDE---VRSARIHDLKILFS 1129
+K+ + L D E V+ D+K LF+
Sbjct: 647 KKKEDLFESTLGDSEEAVVQKLGEDDIKSLFA 678
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 162/340 (47%), Gaps = 66/340 (19%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+LI ++ NK V G LI
Sbjct: 424 GILADEMGLGKTIQTISLIAY------------------LLENK--------GVPGPYLI 457
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE-------YDVVLTTYGVL 623
V P A+L W +E T + SI+ F++ GR + I E ++V++T Y ++
Sbjct: 458 VAPKAVLPNWVNEFATW--VPSIAAFLY--DGRLEERKAIREKIAGEGKFNVLITHYDLI 513
Query: 624 SAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAF-ALSSHCRWCLTGTPIQNS 682
+ + KI+WY +++DE H +K H+S +A+ R LTGTPIQNS
Sbjct: 514 MR------DKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNS 567
Query: 683 LEDLFSLLHFLGAEPWCSWAWWHKLVQRPYEN------NDPRALKLV---KGILRTLMLR 733
L++L+SLL+FL + S + + P+ + D L ++ ++R +LR
Sbjct: 568 LQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILR 627
Query: 734 RTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHY 793
R K+ +K+ LP +++C+ S ++ +Y + +V + K L
Sbjct: 628 RKKDEVEKF------LPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQ-- 679
Query: 794 ANILDLLMQLRRCCNHPFLVLCGS-NPQKYADLSRLARKF 832
+L MQLR+CCNHP+L + G N K ++ R + KF
Sbjct: 680 ----NLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKF 715
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 983 IVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMSLKAG 1041
++FSQ T D+LE L YLR G QR +L +FN+ S + L+S +AG
Sbjct: 733 LLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAG 792
Query: 1042 GVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQA 1101
G+GLNL A V + D WNP +++QA R HRIGQK++V V + +VE + + +A
Sbjct: 793 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILE-RA 851
Query: 1102 RKQMMISGAL 1111
+++M I +
Sbjct: 852 KQKMGIDAKV 861
>AT2G40770.1 | Symbols: | zinc ion binding;DNA
binding;helicases;ATP binding;nucleic acid binding |
chr2:17013535-17021315 REVERSE LENGTH=1664
Length = 1664
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 566 GGTLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNS---------AELISEYDVV 616
G TLIVCP +L QW E+ H+ + S+ I Y G R S EL++ D+V
Sbjct: 500 GATLIVCPAPILPQWHSEITRHTRLGSL-ITCIYEGVRNASLSEEPMIDITELLN-ADIV 557
Query: 617 LTTYGVLSAAF-----RSDGENSIYH-------------KIQWYRVVLDEAHHIKAHKSQ 658
LTTY VL R DG+ +I W+R+ LDEA ++++ +
Sbjct: 558 LTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAAA 617
Query: 659 VAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPR 718
+ A L + RWC+TGTPIQ L+DLF LL FL A P+ WW ++++ PYE D +
Sbjct: 618 ATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYERRDTK 677
Query: 719 ALKLVKGILRTLMLRRTK-ETEDKYGRPILVLPPTDIKLIECEQSESERDFYD------- 770
A++ + +M R +K D+ L LPP + + + S E FY
Sbjct: 678 AMEFTHKFFKQVMWRSSKVHVADE-----LQLPPQEECVSWLKFSAIEEHFYSRQHDTCV 732
Query: 771 -------ALFTRSKVQFDQYVAQGKVLHH--YANILDLLMQLRRCCNHP 810
R ++ + ++ H A +L+ L++LR+ C HP
Sbjct: 733 SYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHP 781
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 893 CSICMDS-PDDPVFTPCAHRFCRECLFNCWGNSAGGN-------CPICRQSL------LK 938
C IC + + + C H C C F + CPICRQ
Sbjct: 1344 CPICHEILRNQKMVFQCGHSTCCNCFFAMTERKSVQETLQKWVMCPICRQHTDVRNIAYA 1403
Query: 939 SDLITCPSESPFKVDIENNM----TESSKVSELMKYLERIQMSTDE-KSIVFSQWTSFFD 993
D S D E ++ + +K+ + + + I+ S + K +VFS W D
Sbjct: 1404 DDRRNSSSSDQDHKDSEASLVVQGSYGTKIEAVTRRILWIKSSDPQTKVLVFSSWNDVLD 1463
Query: 994 LLENPLRSRGIGYLRFHG-----------KLTQKQREKVLDEFNKTSEKRVLLMSLKAGG 1042
+LE+ + I +R G K ++K+ +K + +VLL+ ++ G
Sbjct: 1464 VLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEEKSIQVLLLLVQHGA 1523
Query: 1043 VGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQAR 1102
GLNL A +V L++P NPA E QA+ R+HRIGQ++ +V RF+V TVE + ++
Sbjct: 1524 NGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVSGTVEESIYKLNRN 1583
Query: 1103 KQMMISG 1109
K +S
Sbjct: 1584 KNTNLSS 1590
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 445 ELKPYQSQALYWMSEIEKGIDISNAESNLHPCWSAYNICNG-----RSIYVNIFTGEATN 499
EL+PYQ +A YWM + E+G I+ + + S +I G +++N F+G +
Sbjct: 287 ELRPYQRRAAYWMVQRERGDPITLGDKEDNQFISPLSISVGFLDSATKMFLNPFSGNISL 346
Query: 500 KFPKATKMARGGILADAMGLGKTVMTIALILSN--PGRSKI----GNNFIDGVNDNIITN 553
+ +GGILAD MGLGKTV +A I S+ P +I G++ D +N +
Sbjct: 347 TPEYFSPRIQGGILADEMGLGKTVELLACIFSHRKPAEDEISVSNGSSVTDVLNAGLRRL 406
Query: 554 KRK 556
KR+
Sbjct: 407 KRE 409
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 152/312 (48%), Gaps = 49/312 (15%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+L+ + G+N G ++
Sbjct: 215 GILADEMGLGKTLQTISLLAYL--------HEYRGIN------------------GPHMV 248
Query: 571 VCPMALLGQWKDELETH-SAIRSISIFVHYGGGRTNSAELI--SEYDVVLTTYGVLSAAF 627
V P + LG W +E+ +R++ + R EL+ ++D+ +T++ +
Sbjct: 249 VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEM----- 303
Query: 628 RSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
+ E + + W +++DEAH IK S +++ S++ R +TGTP+QN+L +L+
Sbjct: 304 -AIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 362
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
+LL+FL E + S + + Q EN+ ++ + +LR +LRR K +K
Sbjct: 363 ALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK------ 416
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP +++ S+ ++ +Y AL +Q D V G +L++ MQLR+CC
Sbjct: 417 GLPPKKETILKVGMSQMQKQYYKAL-----LQKDLEVVNGG--GERKRLLNIAMQLRKCC 469
Query: 808 NHPFLVLCGSNP 819
NHP+L G+ P
Sbjct: 470 NHPYL-FQGAEP 480
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 979 DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMS 1037
D + ++FSQ T D+LE+ L RG Y R G +R+ ++ +NK SEK V L+S
Sbjct: 511 DSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLS 570
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
+AGG+G+NL A V L D WNP V+ QA R HRIGQK++V V RF +N +EA++
Sbjct: 571 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKV 629
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 49/312 (15%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+L+ + R + G ++
Sbjct: 215 GILADEMGLGKTLQTISLLA-------------------YLHEYR-------GINGPHMV 248
Query: 571 VCPMALLGQWKDELETH-SAIRSISIFVHYGGGRTNSAELI--SEYDVVLTTYGVLSAAF 627
V P + LG W +E+ +R++ + R EL+ ++D+ +T++ +
Sbjct: 249 VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEM----- 303
Query: 628 RSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
+ E + + W +++DEAH IK S +++ S++ R +TGTP+QN+L +L+
Sbjct: 304 -AIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 362
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
+LL+FL E + S + + Q EN+ ++ + +LR +LRR K +K
Sbjct: 363 ALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK------ 416
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP +++ S+ ++ +Y AL +Q D V G +L++ MQLR+CC
Sbjct: 417 GLPPKKETILKVGMSQMQKQYYKAL-----LQKDLEVVNGG--GERKRLLNIAMQLRKCC 469
Query: 808 NHPFLVLCGSNP 819
NHP+L G+ P
Sbjct: 470 NHPYL-FQGAEP 480
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 979 DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMS 1037
D + ++FSQ T D+LE+ L RG Y R G +R+ ++ +NK SEK V L+S
Sbjct: 511 DSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLS 570
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
+AGG+G+NL A V L D WNP V+ QA R HRIGQK++V V RF +N +EA++
Sbjct: 571 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKV 629
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 49/312 (15%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+L+ + G+N G ++
Sbjct: 210 GILADEMGLGKTLQTISLLAYL--------HEYRGIN------------------GPHMV 243
Query: 571 VCPMALLGQWKDELETH-SAIRSISIFVHYGGGRTNSAELI--SEYDVVLTTYGVLSAAF 627
V P + LG W +E+ +R++ + R +L+ ++D+ +T++ +
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEM----- 298
Query: 628 RSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
+ E + + W +++DEAH IK S +++ S++ R +TGTP+QN+L +L+
Sbjct: 299 -AIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 357
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
+LL+FL E + S + + Q EN+ ++ + +LR +LRR K +K
Sbjct: 358 ALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK------ 411
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP +++ S+ ++ +Y AL + + A G+ +L++ MQLR+CC
Sbjct: 412 GLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGE----RKRLLNIAMQLRKCC 464
Query: 808 NHPFLVLCGSNP 819
NHP+L G+ P
Sbjct: 465 NHPYL-FQGAEP 475
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 979 DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMS 1037
D + ++FSQ T D+LE+ L RG Y R G +R+ ++ +NK SEK V L+S
Sbjct: 506 DSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLS 565
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
+AGG+G+NL A V L D WNP V+ QA R HRIGQK++V V RF ++ +E ++
Sbjct: 566 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKV 624
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 49/312 (15%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+L+ + G+N G ++
Sbjct: 210 GILADEMGLGKTLQTISLLAYL--------HEYRGIN------------------GPHMV 243
Query: 571 VCPMALLGQWKDELETH-SAIRSISIFVHYGGGRTNSAELI--SEYDVVLTTYGVLSAAF 627
V P + LG W +E+ +R++ + R +L+ ++D+ +T++ +
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEM----- 298
Query: 628 RSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
+ E + + W +++DEAH IK S +++ S++ R +TGTP+QN+L +L+
Sbjct: 299 -AIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 357
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
+LL+FL E + S + + Q EN+ ++ + +LR +LRR K +K
Sbjct: 358 ALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK------ 411
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP +++ S+ ++ +Y AL + + A G+ +L++ MQLR+CC
Sbjct: 412 GLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGE----RKRLLNIAMQLRKCC 464
Query: 808 NHPFLVLCGSNP 819
NHP+L G+ P
Sbjct: 465 NHPYL-FQGAEP 475
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 979 DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMS 1037
D + ++FSQ T D+LE+ L RG Y R G +R+ ++ +NK SEK V L+S
Sbjct: 506 DSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLS 565
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
+AGG+G+NL A V L D WNP V+ QA R HRIGQK++V V RF ++ +E ++
Sbjct: 566 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKV 624
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 49/312 (15%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI+L+ + G+N G ++
Sbjct: 210 GILADEMGLGKTLQTISLLAYL--------HEYRGIN------------------GPHMV 243
Query: 571 VCPMALLGQWKDELETH-SAIRSISIFVHYGGGRTNSAELI--SEYDVVLTTYGVLSAAF 627
V P + LG W +E+ +R++ + R +L+ ++D+ +T++ +
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEM----- 298
Query: 628 RSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLF 687
+ E + + W +++DEAH IK S +++ S++ R +TGTP+QN+L +L+
Sbjct: 299 -AIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 357
Query: 688 SLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDKYGRPIL 747
+LL+FL E + S + + Q EN+ ++ + +LR +LRR K +K
Sbjct: 358 ALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK------ 411
Query: 748 VLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCC 807
LPP +++ S+ ++ +Y AL + + A G+ +L++ MQLR+CC
Sbjct: 412 GLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGE----RKRLLNIAMQLRKCC 464
Query: 808 NHPFLVLCGSNP 819
NHP+L G+ P
Sbjct: 465 NHPYL-FQGAEP 475
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 979 DEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMS 1037
D + ++FSQ T D+LE+ L RG Y R G +R+ ++ +NK SEK V L+S
Sbjct: 506 DSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLS 565
Query: 1038 LKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
+AGG+G+NL A V L D WNP V+ QA R HRIGQK++V V RF ++ +E ++
Sbjct: 566 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKV 624
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 158/338 (46%), Gaps = 63/338 (18%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TIALI ++ +K ++ G LI
Sbjct: 407 GILADEMGLGKTIQTIALIAY------------------LLESK--------DLHGPHLI 440
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELIS-----EYDVVLTTYGVLSA 625
+ P A+L W++E + SIS F+ Y G + E+ + +++V++T Y ++
Sbjct: 441 LAPKAVLPNWENEFALWAP--SISAFL-YDGSKEKRTEIRARIAGGKFNVLITHYDLIMR 497
Query: 626 AFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQA-AFALSSHCRWCLTGTPIQNSLE 684
+ + KI W +++DE H +K H+ +A+ R LTGTPIQNSL+
Sbjct: 498 ------DKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQ 551
Query: 685 DLFSLLHFLGAEPWCSWAWWHKLVQRPYEN------NDPRALKLVK---GILRTLMLRRT 735
+L+SLL+FL + S + + P+ D L ++ ++R +LRR
Sbjct: 552 ELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRK 611
Query: 736 KETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYAN 795
K +K+ LP +++C+ S ++ +Y + +V + K L
Sbjct: 612 KSEVEKF------LPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQ---- 661
Query: 796 ILDLLMQLRRCCNHPFLVLCGS-NPQKYADLSRLARKF 832
+L MQLR+CCNHP+L + N K ++ R + KF
Sbjct: 662 --NLTMQLRKCCNHPYLFVGADYNMCKKPEIVRASGKF 697
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 983 IVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMSLKAG 1041
++FSQ T DLLE L YLR G QR +L +FN+ S + L+S +AG
Sbjct: 715 LLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAG 774
Query: 1042 GVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQA 1101
G+GLNL A + + D WNP +++QA R HRIGQK++V V + ++E + + +A
Sbjct: 775 GLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILE-RA 833
Query: 1102 RKQMMISGAL 1111
+++M I +
Sbjct: 834 KQKMGIDAKV 843
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 58/315 (18%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTL 569
GILAD MGLGKT+MTIAL+ + + + G L
Sbjct: 556 NGILADEMGLGKTIMTIALL--------------------------AHLACDKGIWGPHL 589
Query: 570 IVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAEL-----ISEYDVVLTTYGVLS 624
IV P +++ W E E + I ++G + + ++ + V +TTY ++
Sbjct: 590 IVVPTSVMLNW--ETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVI 647
Query: 625 AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLE 684
++ ++ + +W ++LDEAH IK KSQ Q +S R LTGTP+QN L
Sbjct: 648 Q------DSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 701
Query: 685 DLFSLLHFLGAEPWCSWAWWHKLVQRPY-------ENNDPRALKLVKGILRTLMLRRTKE 737
+L+SL+HFL + S + P E + + + +LR +LRR K
Sbjct: 702 ELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKR 761
Query: 738 TEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANIL 797
+K LP +I C S+ +R+ Y+ ++ Q + G + ++
Sbjct: 762 DVEKQ------LPSKHEHVIFCRLSKRQRNLYEDFIASTETQ--ATLTSGS----FFGMI 809
Query: 798 DLLMQLRRCCNHPFL 812
++MQLR+ CNHP L
Sbjct: 810 SIIMQLRKVCNHPDL 824
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 963 KVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVL 1022
K+ EL L +++ ++++F+Q T D+LE + G Y+R G ++R+ ++
Sbjct: 1076 KLQELAMLLRKLKFGG-HRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 1023 DEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVI 1082
FN + + ++S ++GGVG+NL A V D WNPA+++QA R HRIGQ R+V
Sbjct: 1135 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1194
Query: 1083 VRRFIVKNTVEARLQQVQARKQMM 1106
+ R I ++T+E + + +K+++
Sbjct: 1195 IYRLISESTIEENILKKANQKRVL 1218
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 7/176 (3%)
Query: 961 SSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREK 1020
S K+ L + L ++ TD++ ++ S +T DL R R +LR G T +R+K
Sbjct: 531 SGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQK 590
Query: 1021 VLDEFNK-TSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKR 1079
+++ N T ++ L+S KAGG GLNL A+ + L DP WNPA ++QA R+ R GQK+
Sbjct: 591 LVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKK 650
Query: 1080 KVIVRRFIVKNTVEARLQQVQARK---QMMISGALTDDEVRSARI---HDLKILFS 1129
+V V RF+ T+E ++ Q Q K Q +I TD+ R + DL+ LFS
Sbjct: 651 RVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFS 706
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 54/320 (16%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTL 569
G ILAD MGLGKT+ +I L+ + G + + K +
Sbjct: 206 GCILADDMGLGKTLQSITLLYTL---------LCQGFDGTPMVKK-------------AI 243
Query: 570 IVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAFRS 629
IV P +L+ W+ E++ R I + R + I + + VL ++
Sbjct: 244 IVTPTSLVSNWEAEIKKWVGDR-IQLIALCESTRDDVLSGIDSFTRPRSALQVLIISY-- 300
Query: 630 DGENSIYHKIQWYR------VVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSL 683
E H ++ + ++ DEAH +K ++ +A +L+ R L+GTP+QN L
Sbjct: 301 --ETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDL 358
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYE-NNDPRALKLVKGILRTLMLRRTKETEDKY 742
E+ F++++F A + + P +P A + K L R+ E K
Sbjct: 359 EEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEK----NLAADRSAELSSKV 414
Query: 743 GRPILV---------LPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHY 793
+ IL LPP I+++ C+ + + + L + K Q KVL +
Sbjct: 415 NQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQLKRALADNAKQTKVLAY- 473
Query: 794 ANILDLLMQLRRCCNHPFLV 813
+ L++ CNHP L+
Sbjct: 474 ------ITALKKLCNHPKLI 487
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 7/176 (3%)
Query: 961 SSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREK 1020
S K+ L + L ++ TD++ ++ S +T DL R R +LR G T +R+K
Sbjct: 533 SGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQK 592
Query: 1021 VLDEFNK-TSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKR 1079
+++ N T ++ L+S KAGG GLNL A+ + L DP WNPA ++QA R+ R GQK+
Sbjct: 593 LVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKK 652
Query: 1080 KVIVRRFIVKNTVEARLQQVQARK---QMMISGALTDDEVRSARI---HDLKILFS 1129
+V V RF+ T+E ++ Q Q K Q +I TD+ R + DL+ LFS
Sbjct: 653 RVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFS 708
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 56/322 (17%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTL 569
G ILAD MGLGKT+ +I L+ + G + + K +
Sbjct: 206 GCILADDMGLGKTLQSITLLYTL---------LCQGFDGTPMVKK-------------AI 243
Query: 570 IVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAAFRS 629
IV P +L+ W+ E++ R I + R + I + + VL ++
Sbjct: 244 IVTPTSLVSNWEAEIKKWVGDR-IQLIALCESTRDDVLSGIDSFTRPRSALQVLIISY-- 300
Query: 630 DGENSIYHKIQWYR------VVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSL 683
E H ++ + ++ DEAH +K ++ +A +L+ R L+GTP+QN L
Sbjct: 301 --ETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDL 358
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYE-NNDPRALKLVKGILRTLMLRRTKETEDKY 742
E+ F++++F A + + P +P A + K L R+ E K
Sbjct: 359 EEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEK----NLAADRSAELSSKV 414
Query: 743 GRPILV---------LPPTDIKLIECEQSESERDFYDALFTRSKVQ--FDQYVAQGKVLH 791
+ IL LPP I+++ C+ + + Y+ + ++ Q KVL
Sbjct: 415 NQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLA 474
Query: 792 HYANILDLLMQLRRCCNHPFLV 813
+ + L++ CNHP L+
Sbjct: 475 Y-------ITALKKLCNHPKLI 489
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 963 KVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVL 1022
K+ L + L +++ +TD + + FS T D++E+ L +G YLR G+ + R ++
Sbjct: 1074 KLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 1023 DEFNKT-SEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKV 1081
D FNK+ S + L+S++AGGVG+NL AA V L D WNP V+ QA R HRIGQK+ V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 1082 IVRRFIVKNTVEARLQQVQARKQMMISGALT 1112
+V RF N+VE +++ K + + ++T
Sbjct: 1193 LVLRFETVNSVEEQVRASAEHKLGVANQSIT 1223
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 72/324 (22%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKTV I+LI ++ ND +G L+
Sbjct: 775 GILADEMGLGKTVQVISLICY----------LMETKND----------------RGPFLV 808
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE------YDVVLTTYGVLS 624
V P ++L W+ E+ + SI V Y G +L E ++V+LTTY L
Sbjct: 809 VVPSSVLPGWQSEINFWAP--SIHKIV-YCGTPDERRKLFKEQIVHQKFNVLLTTYEYLM 865
Query: 625 AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQV-AQAAFALSSHCRWCLTGTPIQNSL 683
+ KI W+ +++DE H IK ++ A +SSH R LTGTP+QN+L
Sbjct: 866 NKH----DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH-RLLLTGTPLQNNL 920
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRA--------------LKLVKGILRT 729
E+L++LL+FL + S + + +P+++N + + + +LR
Sbjct: 921 EELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRP 980
Query: 730 LMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYV-AQGK 788
+LRR K + LP +LI CE S + L R + A+ +
Sbjct: 981 FVLRRLKHKVENE------LPEKIERLIRCEASA----YQKLLMKRVEDNLGSIGNAKSR 1030
Query: 789 VLHHYANILDLLMQLRRCCNHPFL 812
+H+ +M+LR CNHP+L
Sbjct: 1031 AVHNS------VMELRNICNHPYL 1048
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 963 KVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVL 1022
K+ L + L +++ +TD + + FS T D++E+ L +G YLR G+ + R ++
Sbjct: 1074 KLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 1023 DEFNKT-SEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKV 1081
D FNK+ S + L+S++AGGVG+NL AA V L D WNP V+ QA R HRIGQK+ V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 1082 IVRRFIVKNTVEARLQQVQARKQMMISGALT 1112
+V RF N+VE +++ K + + ++T
Sbjct: 1193 LVLRFETVNSVEEQVRASAEHKLGVANQSIT 1223
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 72/324 (22%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKTV I+LI ++ ND +G L+
Sbjct: 775 GILADEMGLGKTVQVISLICY----------LMETKND----------------RGPFLV 808
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE------YDVVLTTYGVLS 624
V P ++L W+ E+ + SI V Y G +L E ++V+LTTY L
Sbjct: 809 VVPSSVLPGWQSEINFWAP--SIHKIV-YCGTPDERRKLFKEQIVHQKFNVLLTTYEYLM 865
Query: 625 AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQV-AQAAFALSSHCRWCLTGTPIQNSL 683
+ KI W+ +++DE H IK ++ A +SSH R LTGTP+QN+L
Sbjct: 866 NKH----DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH-RLLLTGTPLQNNL 920
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRA--------------LKLVKGILRT 729
E+L++LL+FL + S + + +P+++N + + + +LR
Sbjct: 921 EELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRP 980
Query: 730 LMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYV-AQGK 788
+LRR K + LP +LI CE S + L R + A+ +
Sbjct: 981 FVLRRLKHKVENE------LPEKIERLIRCEASA----YQKLLMKRVEDNLGSIGNAKSR 1030
Query: 789 VLHHYANILDLLMQLRRCCNHPFL 812
+H+ +M+LR CNHP+L
Sbjct: 1031 AVHNS------VMELRNICNHPYL 1048
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 963 KVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVL 1022
K+ L + L +++ +TD + + FS T D++E+ L +G YLR G+ + R ++
Sbjct: 1074 KLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 1023 DEFNKT-SEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKV 1081
D FNK+ S + L+S++AGGVG+NL AA V L D WNP V+ QA R HRIGQK+ V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 1082 IVRRFIVKNTVEARLQQVQARKQMMISGALT 1112
+V RF N+VE +++ K + + ++T
Sbjct: 1193 LVLRFETVNSVEEQVRASAEHKLGVANQSIT 1223
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 72/324 (22%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKTV I+LI ++ ND +G L+
Sbjct: 775 GILADEMGLGKTVQVISLICY----------LMETKND----------------RGPFLV 808
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE------YDVVLTTYGVLS 624
V P ++L W+ E+ + SI V Y G +L E ++V+LTTY L
Sbjct: 809 VVPSSVLPGWQSEINFWAP--SIHKIV-YCGTPDERRKLFKEQIVHQKFNVLLTTYEYLM 865
Query: 625 AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQV-AQAAFALSSHCRWCLTGTPIQNSL 683
+ KI W+ +++DE H IK ++ A +SSH R LTGTP+QN+L
Sbjct: 866 NKH----DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH-RLLLTGTPLQNNL 920
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRA--------------LKLVKGILRT 729
E+L++LL+FL + S + + +P+++N + + + +LR
Sbjct: 921 EELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRP 980
Query: 730 LMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYV-AQGK 788
+LRR K + LP +LI CE S + L R + A+ +
Sbjct: 981 FVLRRLKHKVENE------LPEKIERLIRCEASA----YQKLLMKRVEDNLGSIGNAKSR 1030
Query: 789 VLHHYANILDLLMQLRRCCNHPFL 812
+H+ +M+LR CNHP+L
Sbjct: 1031 AVHNS------VMELRNICNHPYL 1048
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 54/311 (17%)
Query: 512 ILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIV 571
ILAD MGLGKTV +++++ F+ + + G L+V
Sbjct: 647 ILADEMGLGKTVQSVSML-----------GFLQN---------------TQQIPGPFLVV 680
Query: 572 CPMALLGQWKDELETHSAIRSISIFVHYGGGRT--NSAELISE--------YDVVLTTYG 621
P++ L W E +I ++V R E +E ++ +LTTY
Sbjct: 681 VPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYE 740
Query: 622 VLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQN 681
V+ + ++ KI+W +++DEAH +K ++Q+ A S+ + +TGTP+QN
Sbjct: 741 VVLK------DKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQN 794
Query: 682 SLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKETEDK 741
S+E+L++LLHFL + + + + + N+ L + LR +LRR + +K
Sbjct: 795 SVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESE-LANLHLELRPHILRRVIKDVEK 853
Query: 742 YGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLM 801
LPP +++ E S ++ +Y + R+ ++ V +V ++L++++
Sbjct: 854 ------SLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQV-----SLLNIVV 902
Query: 802 QLRRCCNHPFL 812
+L++CCNHPFL
Sbjct: 903 ELKKCCNHPFL 913
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 961 SSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREK 1020
S K+ L K L R++ T + ++FSQ D+L L RG + R G + R++
Sbjct: 938 SGKLVILDKLLVRLR-ETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQ 996
Query: 1021 VLDEFNK-TSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKR 1079
+D FN S+ L+S +AGG+G+NL A V + D WNP + QA+ R HRIGQ+
Sbjct: 997 AMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQE 1056
Query: 1080 KVIVRRFIVKNTVEARLQQVQARKQMM 1106
V + RF+ +VE + + RK ++
Sbjct: 1057 VVNIYRFVTSKSVEEEILERAKRKMVL 1083
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 74/316 (23%)
Query: 512 ILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIV 571
ILAD MGLGKT+ +IA + AS+ L+V
Sbjct: 206 ILADEMGLGKTIQSIAFL----------------------------ASLFEENLSPHLVV 237
Query: 572 CPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELI------------SEYDVVLTT 619
P++ + W+ E T + ++ ++ G + + ++I S++DV+LTT
Sbjct: 238 APLSTIRNWEREFATWAPHMNVVMYT----GDSEARDVIWEHEFYFSEGRKSKFDVLLTT 293
Query: 620 YGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPI 679
Y ++ S+ I+W +++DE H +K KS++ + +S LTGTP+
Sbjct: 294 YEMVHPGI------SVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPL 347
Query: 680 QNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKET- 738
QN+L +LF+L+HFL A+ + S + + N + + +L +LRR K+
Sbjct: 348 QNNLNELFALMHFLDADKFGSLEKFQDI-------NKEEQISRLHQMLAPHLLRRLKKDV 400
Query: 739 -EDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANIL 797
+DK +PP ++ + S +++ Y A+ T + Q + + + A I
Sbjct: 401 LKDK-------VPPKKELILRVDMSSQQKEVYKAVITNNY----QVLTKKRD----AKIS 445
Query: 798 DLLMQLRRCCNHPFLV 813
++LM+LR+ C+HP+L+
Sbjct: 446 NVLMKLRQVCSHPYLL 461
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 945 PSESPFKVDIENNMTESSKVSELMKYLERIQMSTDEKS---IVFSQWTSFFDLLENPLRS 1001
P P D T+ + S ++ L+++ + E+ ++++Q+ LLE+
Sbjct: 462 PDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTF 521
Query: 1002 RGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV-LLMSLKAGGVGLNLTAASNVFLMDPWW 1060
+ Y R GK++ +R+ +D FN + R L+S +AGG+G+NL A V + D W
Sbjct: 522 KNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDW 581
Query: 1061 NPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMM 1106
NP + QA+ R+HR+GQ KV++ R I K TVE R+ ++ K ++
Sbjct: 582 NPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLL 627
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 174/430 (40%), Gaps = 75/430 (17%)
Query: 480 YNICNGRSIYVNIFTGEATNKFPKATKMARGGILADAMGLGKTVMTIALILSNPGRSKIG 539
Y +C + + + E N + GIL D MGLGKT+ A++ S+ +
Sbjct: 1472 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1531
Query: 540 NNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPMALLGQWKDELETHSAIRSISIFVHY 599
+ +D ++IVCP L+G W E+E + + +S+ +
Sbjct: 1532 TDELDVF--------------------PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYV 1571
Query: 600 GGG--RTNSAELISEYDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKS 657
G R + E + ++V++T+Y V+ R D + + W +LDE H IK KS
Sbjct: 1572 GSAQDRVSLREQFNNHNVIITSYDVV----RKDVD--YLTQFSWNYCILDEGHIIKNAKS 1625
Query: 658 QVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLH-----FLGAEPWCSWAWWHKLVQRPY 712
++ A L + R L+GTPIQN++ +L+SL FLG E ++ L+
Sbjct: 1626 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAA-- 1683
Query: 713 ENNDPR-----------ALKLVKGILRTLMLRRTKE----------TEDKYGRPILVLPP 751
DP+ A++ + + +LRRTKE +D+Y L P
Sbjct: 1684 --RDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCD----LSP 1737
Query: 752 TDIKLIECEQSESERDFYDALFT--RSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNH 809
+KL E S + ++ S + VA K H L L++L C+H
Sbjct: 1738 VQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKL---CSH 1794
Query: 810 PFLVLCGSNPQKYA-DLSRLARKFLQTNTESSDICAPSDPQQHAELNRLASRFLQNCDSA 868
P LVL + A DL+ + SDI QH+ L+ C
Sbjct: 1795 PLLVLGDKVTEPVASDLAAMING-------CSDIITELHKVQHSPKLVALQEILEECGIG 1847
Query: 869 SNSIQSRGYI 878
S++ S G +
Sbjct: 1848 SDASSSDGTL 1857
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 956 NNMTESSKVSELMKYLERIQMSTDEKS------------IVFSQWTSFFDLLENPL---R 1000
+ + S K+ L + LE + +D S ++F+Q + D++E L
Sbjct: 1826 HKVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAH 1885
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWW 1060
+ + Y+R G + ++R +++ FN VLL++ GG+GLNLT+A + M+ W
Sbjct: 1886 MKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDW 1945
Query: 1061 NPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARK 1103
NP + QA+ R HR+GQKR V V R I++ T+E ++ +Q K
Sbjct: 1946 NPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFK 1988
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 174/430 (40%), Gaps = 75/430 (17%)
Query: 480 YNICNGRSIYVNIFTGEATNKFPKATKMARGGILADAMGLGKTVMTIALILSNPGRSKIG 539
Y +C + + + E N + GIL D MGLGKT+ A++ S+ +
Sbjct: 1441 YKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGS 1500
Query: 540 NNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPMALLGQWKDELETHSAIRSISIFVHY 599
+ +D ++IVCP L+G W E+E + + +S+ +
Sbjct: 1501 TDELDVF--------------------PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYV 1540
Query: 600 GGG--RTNSAELISEYDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKS 657
G R + E + ++V++T+Y V+ R D + + W +LDE H IK KS
Sbjct: 1541 GSAQDRVSLREQFNNHNVIITSYDVV----RKDVD--YLTQFSWNYCILDEGHIIKNAKS 1594
Query: 658 QVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLH-----FLGAEPWCSWAWWHKLVQRPY 712
++ A L + R L+GTPIQN++ +L+SL FLG E ++ L+
Sbjct: 1595 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAA-- 1652
Query: 713 ENNDPR-----------ALKLVKGILRTLMLRRTKE----------TEDKYGRPILVLPP 751
DP+ A++ + + +LRRTKE +D+Y L P
Sbjct: 1653 --RDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCD----LSP 1706
Query: 752 TDIKLIECEQSESERDFYDALFT--RSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNH 809
+KL E S + ++ S + VA K H L L++L C+H
Sbjct: 1707 VQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKL---CSH 1763
Query: 810 PFLVLCGSNPQKYA-DLSRLARKFLQTNTESSDICAPSDPQQHAELNRLASRFLQNCDSA 868
P LVL + A DL+ + SDI QH+ L+ C
Sbjct: 1764 PLLVLGDKVTEPVASDLAAMING-------CSDIITELHKVQHSPKLVALQEILEECGIG 1816
Query: 869 SNSIQSRGYI 878
S++ S G +
Sbjct: 1817 SDASSSDGTL 1826
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 956 NNMTESSKVSELMKYLERIQMSTDEKS------------IVFSQWTSFFDLLENPL---R 1000
+ + S K+ L + LE + +D S ++F+Q + D++E L
Sbjct: 1795 HKVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAH 1854
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWW 1060
+ + Y+R G + ++R +++ FN VLL++ GG+GLNLT+A + M+ W
Sbjct: 1855 MKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDW 1914
Query: 1061 NPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARK 1103
NP + QA+ R HR+GQKR V V R I++ T+E ++ +Q K
Sbjct: 1915 NPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFK 1957
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 74/316 (23%)
Query: 512 ILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIV 571
ILAD MGLGKT+ +IA + AS+ L+V
Sbjct: 247 ILADEMGLGKTIQSIAFL----------------------------ASLFEENLSPHLVV 278
Query: 572 CPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELI------------SEYDVVLTT 619
P++ + W+ E T + ++ ++ G + + ++I S++DV+LTT
Sbjct: 279 APLSTIRNWEREFATWAPHMNVVMYT----GDSEARDVIWEHEFYFSEGRKSKFDVLLTT 334
Query: 620 YGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPI 679
Y ++ S+ I+W +++DE H +K KS++ + +S LTGTP+
Sbjct: 335 YEMVHPGI------SVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPL 388
Query: 680 QNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKET- 738
QN+L +LF+L+HFL A+ + S + + N + + +L +LRR K+
Sbjct: 389 QNNLNELFALMHFLDADKFGSLEKFQDI-------NKEEQISRLHQMLAPHLLRRLKKDV 441
Query: 739 -EDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANIL 797
+DK +PP ++ + S +++ Y A+ T + Q + + + A I
Sbjct: 442 LKDK-------VPPKKELILRVDMSSQQKEVYKAVITNNY----QVLTKKRD----AKIS 486
Query: 798 DLLMQLRRCCNHPFLV 813
++LM+LR+ C+HP+L+
Sbjct: 487 NVLMKLRQVCSHPYLL 502
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 945 PSESPFKVDIENNMTESSKVSELMKYLERIQMSTDEKS---IVFSQWTSFFDLLENPLRS 1001
P P D T+ + S ++ L+++ + E+ ++++Q+ LLE+
Sbjct: 503 PDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTF 562
Query: 1002 RGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV-LLMSLKAGGVGLNLTAASNVFLMDPWW 1060
+ Y R GK++ +R+ +D FN + R L+S +AGG+G+NL A V + D W
Sbjct: 563 KNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDW 622
Query: 1061 NPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMM 1106
NP + QA+ R+HR+GQ KV++ R I K TVE R+ ++ K ++
Sbjct: 623 NPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLL 668
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 957 NMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQK 1016
N + S K+S +M LE + + + ++FSQ +L+++ L S G +LR G
Sbjct: 727 NDSISCKLSFIMSLLENL-IPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAP 785
Query: 1017 QREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIG 1076
R K ++EF + + L++ + GG+GL LT A V ++DP WNP+ + Q++ R +RIG
Sbjct: 786 DRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIG 845
Query: 1077 QKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDDE-VRSARIHDLKILFS 1129
Q + VIV R + TVE ++ + Q K + A E +R DL+ LFS
Sbjct: 846 QTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFS 899
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 63/329 (19%)
Query: 508 ARGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGG 567
+GGIL D MGLGKT M I L+ SK+ KR
Sbjct: 395 GKGGILGDDMGLGKT-MQICSFLAGLFHSKL--------------IKR------------ 427
Query: 568 TLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAE-----LISEYDVVLTTYGV 622
L+V P LL W EL T + + Y G T + E ++ ++LTTY +
Sbjct: 428 ALVVAPKTLLPHWMKELAT---VGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDI 484
Query: 623 L---SAAFRSDG---ENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTG 676
+ + A + D + +W ++LDE H IK +Q A++ + S R ++G
Sbjct: 485 VRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISG 544
Query: 677 TPIQNSLEDLFSLLHF-----LGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTL- 730
TPIQN+L++L++L +F LG + W + H +++ +N R ++ + + L
Sbjct: 545 TPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLR 604
Query: 731 ------MLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYV 784
LRR K L D ++ + +R Y+A F S++ +
Sbjct: 605 EHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEA-FLNSEIVLSAFD 663
Query: 785 AQGKVLHHYANILDLLMQLRRCCNHPFLV 813
+ L L L++ C+HP L+
Sbjct: 664 ---------GSPLAALTILKKICDHPLLL 683
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 943 TCPSESPFKVDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSR 1002
+CP F D +T+S K+ L L+R++ + + + ++F+Q T ++LE+ + R
Sbjct: 1189 SCPPMQSF--DPAKLLTDSGKLQTLDILLKRLR-AGNHRVLLFAQMTKMLNILEDYMNYR 1245
Query: 1003 GIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNP 1062
YLR G T R ++ +F S+ V L+S +AGG+G+NLTAA V + WNP
Sbjct: 1246 KYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNP 1305
Query: 1063 AVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEA----RLQQVQARKQMMISGA 1110
++ QA+ R HR+GQ + V V R I K TVE R Q +Q++++G
Sbjct: 1306 TLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1357
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 75/329 (22%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ +A + + + N+ G L+
Sbjct: 607 GILADEMGLGKTIQAMAFL--------------------------AHLAEEKNIWGPFLV 640
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGG--GRT------NSAELI---SEYDVVLTT 619
V P ++L W DE+ + ++GG RT N + + + +++T+
Sbjct: 641 VAPASVLNNWADEISRFCP--DLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITS 698
Query: 620 YGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPI 679
Y +L + + +++W +VLDEA IK+ S + + + R LTGTPI
Sbjct: 699 YQLLVT------DEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPI 752
Query: 680 QNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENN-------DPRALKLVKGILRTLML 732
QN++ +L++LLHF+ + + +++ + EN+ + L + IL+ ML
Sbjct: 753 QNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFML 812
Query: 733 RRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDA---------LFTRSKVQFDQY 783
RR K+ + L + C+ S ++ FY A LF ++ QF
Sbjct: 813 RRVKKDV------VSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQF--- 863
Query: 784 VAQGKVLHHYANILDLLMQLRRCCNHPFL 812
KVL N++++++QLR+ CNHP L
Sbjct: 864 -TDKKVL----NLMNIVIQLRKVCNHPEL 887
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 943 TCPSESPFKVDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSR 1002
+CP F D +T+S K+ L L+R++ + + + ++F+Q T ++LE+ + R
Sbjct: 1222 SCPPMQSF--DPAKLLTDSGKLQTLDILLKRLR-AGNHRVLLFAQMTKMLNILEDYMNYR 1278
Query: 1003 GIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNP 1062
YLR G T R ++ +F S+ V L+S +AGG+G+NLTAA V + WNP
Sbjct: 1279 KYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNP 1338
Query: 1063 AVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEA----RLQQVQARKQMMISGA 1110
++ QA+ R HR+GQ + V V R I K TVE R Q +Q++++G
Sbjct: 1339 TLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1390
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 147/362 (40%), Gaps = 108/362 (29%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ +A + + + N+ G L+
Sbjct: 607 GILADEMGLGKTIQAMAFL--------------------------AHLAEEKNIWGPFLV 640
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNS------------------------ 606
V P ++L W DE+ + ++GG + +
Sbjct: 641 VAPASVLNNWADEISRFCP--DLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFDPW 698
Query: 607 --------------------AELISEYDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVL 646
+++ + + +++T+Y +L + + +++W +VL
Sbjct: 699 AVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVT------DEKYFRRVKWQYMVL 752
Query: 647 DEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHK 706
DEA IK+ S + + + R LTGTPIQN++ +L++LLHF+ + + +++
Sbjct: 753 DEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNE 812
Query: 707 LVQRPYENN-------DPRALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIEC 759
+ EN+ + L + IL+ MLRR K+ + L + C
Sbjct: 813 WFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV------VSELTTKTEVTVHC 866
Query: 760 EQSESERDFYDA---------LFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHP 810
+ S ++ FY A LF ++ QF KVL N++++++QLR+ CNHP
Sbjct: 867 KLSSRQQAFYQAIKNKISLAELFDSNRGQF----TDKKVL----NLMNIVIQLRKVCNHP 918
Query: 811 FL 812
L
Sbjct: 919 EL 920
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 76/334 (22%)
Query: 512 ILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIV 571
ILAD MGLGKT+ +IAL+ S +N+I + L++
Sbjct: 295 ILADEMGLGKTIQSIALLAS-------------LFEENLIPH---------------LVI 326
Query: 572 CPMALLGQWKDELETHSAIRSISIFVHYGGGRT-------------------NSAELISE 612
P++ L W+ E T + ++ ++ R S ++ SE
Sbjct: 327 APLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSE 386
Query: 613 -------YDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFA 665
+DV+LT+Y +++ ++++ I+W +++DE H +K S++ +
Sbjct: 387 SKQKRIKFDVLLTSYEMINL------DSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQ 440
Query: 666 LSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKG 725
SS+ R LTGTP+QN+L++LF L+HFL A + S + + + + N + +
Sbjct: 441 YSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHK 497
Query: 726 ILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVA 785
+L +LRR K+ K +PP ++ + S ++++Y A+FTR+ Y
Sbjct: 498 MLAPHLLRRVKKDVMK------DMPPKKELILRVDLSSLQKEYYKAIFTRN------YQV 545
Query: 786 QGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNP 819
K ++ +++M+LR+ C HP++ L G P
Sbjct: 546 LTKKGGAQISLNNIMMELRKVCCHPYM-LEGVEP 578
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 983 IVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFN-KTSEKRVLLMSLKAG 1041
++++Q+ DLLE+ + Y R GK+ +R+ +D FN K S K L+S +AG
Sbjct: 615 LIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAG 674
Query: 1042 GVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQA 1101
G+G+NL A V + D WNP + QA+ R HR+GQ KV++ R I + T+E R+ Q+
Sbjct: 675 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTK 734
Query: 1102 RK---QMMISGALTDDEVRSARIHDL 1124
+K + ++ G L + + D+
Sbjct: 735 KKMVLEHLVVGKLKTQNINQEELDDI 760
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 961 SSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREK 1020
S+K L + L ++ S + ++FSQWTS D+LE L G+ Y R G R+
Sbjct: 587 SAKCRTLAELLPSMKKS-GHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQT 645
Query: 1021 VLDEFNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRK 1080
++D FN L+S +AGG GLNLT A V + D +NP ++ QA R HRIGQ +
Sbjct: 646 IVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKP 705
Query: 1081 VIVRRFIVKNTVEARLQQVQARKQMMISGAL 1111
V + R + K+TV+ + ++ RK ++ + L
Sbjct: 706 VTIFRLVTKSTVDENIYEIAKRKLVLDAAVL 736
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 56/341 (16%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTL 569
G ILAD MGLGKT+ I + S NN G L
Sbjct: 234 GAILADEMGLGKTIQAITYLTL--------------------------LSRLNNDPGPHL 267
Query: 570 IVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTN-SAELIS--------EYDVVLTTY 620
+VCP ++L W+ EL S ++ ++G R S EL S ++V+L Y
Sbjct: 268 VVCPASVLENWERELRKWCP--SFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCY 325
Query: 621 GVLSA-AFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQ--AAFALSSHCRWCLTGT 677
+ + + + + + +W V++DEAH +K S + + A +++ R LTGT
Sbjct: 326 SLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 385
Query: 678 PIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRALKLVKGILRTLMLRRTKE 737
P+QN L +L+SLL F+ + + + + +++ D + +K IL +LRR K
Sbjct: 386 PLQNDLHELWSLLEFMLPDIFTT---ENVDLKKLLNAEDTELITRMKSILGPFILRRLK- 441
Query: 738 TEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANIL 797
D + + + + L+E +Q ++ ++ + S+ + + K L+ A L
Sbjct: 442 -SDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKL--SSKSLNSLAKAL 498
Query: 798 ------DLLMQLRRCCNHPFLVLCGSNPQKYADLSRLARKF 832
+ Q R+ NHP L+ + + D+ R+ARK
Sbjct: 499 PKRQISNYFTQFRKIANHPLLIRRIYSDE---DVIRIARKL 536
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 983 IVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGG 1042
++FSQ D+LE+ L + Y R G KQR ++DEFN + + V +++ K GG
Sbjct: 747 LLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGG 806
Query: 1043 VGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQAR 1102
+G NLT A+ V + DP WNP+ + QA R RIGQK+ V V R I + T+E ++ Q
Sbjct: 807 LGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIY 866
Query: 1103 KQMMISGALTDDEVRS-ARIHDLKILF 1128
K + + L + + R + D+K LF
Sbjct: 867 KHFLTNKILKNPQQRRFFKARDMKDLF 893
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 133/352 (37%), Gaps = 95/352 (26%)
Query: 510 GGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTL 569
GGI+ D MGLGKT+ ++ + S + +K SI
Sbjct: 405 GGIIGDEMGLGKTIQVLSFLGS------------------LHFSKMYKPSI--------- 437
Query: 570 IVCPMALLGQWKDELETHSAIRSISIF------VHYGGGRTNSAE--------------- 608
I+CP+ LL QW+ E + + I +G G+ ++E
Sbjct: 438 IICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEP 497
Query: 609 ---------------LISEYDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIK 653
L SE +++TTY L R GE + I+W VLDE H I+
Sbjct: 498 KSKNTKKWDSLLNRVLNSESGLLITTYEQL----RLQGEKLL--NIEWGYAVLDEGHRIR 551
Query: 654 AHKSQVAQAAFALSSHCRWCLTGTPIQNSLEDLFSLLHF-----LGAEPWCSWAWWHKLV 708
S + L + R +TG PIQN L +L+SL F LG P + +
Sbjct: 552 NPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPIT 611
Query: 709 QRPYENNDP-------RALKLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQ 761
Y N P R +++ ++ +LRR K + + L ++ C
Sbjct: 612 VGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAH------LTKKTEHVLFCSL 665
Query: 762 SESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLMQLRRCCNHPFLV 813
+ +R Y A S+V+ ++ N L + +R+ CNHP L+
Sbjct: 666 TVEQRSTYRAFLASSEVE--------QIFDGNRNSLYGIDVMRKICNHPDLL 709
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 960 ESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSR-----GIGYLRFHGKLT 1014
+S K LM+++E ++ EK +VFSQ+ L+ L SR G L HGKL
Sbjct: 1197 QSVKTRFLMEFVELCEV-IKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLE 1255
Query: 1015 QKQREKVLDEFNK-TSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIH 1073
QKQR+ +++EFN S+ +V L S KA G++L AS V L+D WNPAVE QAI R +
Sbjct: 1256 QKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAY 1315
Query: 1074 RIGQKRKVIVRRFIVKNTVEARLQQVQARK 1103
RIGQKR V + K T E QA+K
Sbjct: 1316 RIGQKRIVYTYHLVAKGTPEGPKYCKQAQK 1345
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 968 MKYLERIQ---MSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDE 1024
M+ LE++ +S +K ++FS D+LE L +G + R G R+ ++D+
Sbjct: 530 MRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDD 589
Query: 1025 FNKTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVR 1084
FN + K+V L+S KAGG+GLNL +A+ V + DP WNP+ + QA R R GQKR V+V
Sbjct: 590 FNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVF 649
Query: 1085 RFIVKNTVEARLQQVQARKQMM 1106
R + ++E + Q KQ +
Sbjct: 650 RLLSAGSLEELVYTRQVYKQQL 671
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 506 KMARGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQ 565
K GGIL D MGLGKT+ TIA + + G+ DG + + + +
Sbjct: 155 KNNHGGILGDDMGLGKTIQTIAFLAAVYGK--------DG--------DAGESCLLESDK 198
Query: 566 GGTLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE--YDVVLTTYGVL 623
G LI+CP +++ W+ E ++ +S V++G R E + +V++T++
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVS--VYHGSNRDMILEKLKARGVEVLVTSFDT- 255
Query: 624 SAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSL 683
FR G + I W V+ DEAH +K KS++ +A + + R LTGT +QN +
Sbjct: 256 ---FRIQG--PVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKI 310
Query: 684 EDLFSLLHFLGAEPWCSWAWWHKLVQRPYENN-------------DPRALKLVKGILRTL 730
+LF+L ++ + + P + D R L +LR
Sbjct: 311 SELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHL-GSLLRKY 369
Query: 731 MLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQ 779
MLRRTKE + L++ D ++ C+ S+ +R Y + ++Q
Sbjct: 370 MLRRTKEETIGH----LMMGKED-NVVFCQMSQLQRRVYQRMIQLPEIQ 413
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 931 ICRQSLLKSDLITCPSESPFKVDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTS 990
+C K DL+ P+ + E K L+ ++ RI + EK +V+SQ+
Sbjct: 896 LCCNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFI-RISGTVKEKVLVYSQYID 954
Query: 991 FFDLLENPLR-----SRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLMSLKAGGVG 1044
L+ L + G L HGK+ Q+ R+ ++D FNK S +VLL S KA G
Sbjct: 955 TLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEG 1014
Query: 1045 LNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVE 1093
++L AS V ++D WNP+VE QAI R RIGQKR V + +VK+T E
Sbjct: 1015 ISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSE 1063
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 144/325 (44%), Gaps = 66/325 (20%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKT+ TI + G N + G L+
Sbjct: 223 GILADQMGLGKTIQTIGFLSHLKG---------------------------NGLDGPYLV 255
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELIS---------EYDVVLTTYG 621
+ P++ L W +E+ + SI+ + Y G + EL ++ +V+T+Y
Sbjct: 256 IAPLSTLSNWFNEIARFTP--SINAII-YHGDKNQRDELRRKHMPKTVGPKFPIVITSYE 312
Query: 622 VLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQN 681
V +D + + H W VV+DE H +K HK ++ + L + LTGTP+QN
Sbjct: 313 VA----MNDAKRILRH-YPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQN 367
Query: 682 SLEDLFSLLHFL---------GAEPWCSWAWWHKLVQRPYENNDPRALKLVK--GILRTL 730
+L +L+SLL+F+ E W ++ +K E RA + K GILR
Sbjct: 368 NLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPF 427
Query: 731 MLRRTK-ETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRS-KVQFDQYVAQGK 788
+LRR K + E L LP ++ ++ ++ F + L + + + +G+
Sbjct: 428 ILRRMKCDVE-------LSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQ 480
Query: 789 VLHHYANILDLLMQLRRCCNHPFLV 813
N +L++QLR+ CNHP L+
Sbjct: 481 GWKGKLN--NLVIQLRKNCNHPDLL 503
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 976 MSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEF-NKTSEKRVL 1034
+ + K ++FSQWT D+++ +G R G + +R + + +F ++ S +
Sbjct: 537 FANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIF 596
Query: 1035 LMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEA 1094
L+S +AGG+G+NLTAA L D WNP ++ QA+ R HRIGQ + V V R ++E
Sbjct: 597 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIET 656
Query: 1095 RL 1096
R+
Sbjct: 657 RV 658
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 955 ENNMTESSKVSELMKYLERIQMSTD--EKSIVFSQWTSFFDLLENPLR------------ 1000
+NN S +++ L+ + MS D +K++VFSQ DL+E L
Sbjct: 1084 KNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFW 1143
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV--LLMSLKAGGVGLNLTAASNVFLMDP 1058
+G + R GK +R+K++D FN+ KRV L+S +AG +G+NL AA+ V ++D
Sbjct: 1144 KKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDG 1203
Query: 1059 WWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQ 1104
WNP + QAI R R GQK+ V R + + T+E ++ + Q K+
Sbjct: 1204 SWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKE 1249
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 61/340 (17%)
Query: 496 EATNKFPKATKMARGGILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKR 555
EA N + ++ ILAD MGLGKTV A + S + F
Sbjct: 695 EALNWLRRCWHKSKNVILADEMGLGKTVSASAFL------SSLYFEF------------- 735
Query: 556 KNASISNNVQGGTLIVCPMALLGQWKDE----------LETHSAIRSISIFVHYGGGRTN 605
V L++ P++ + W E +E H + + +I Y N
Sbjct: 736 -------GVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKN 788
Query: 606 SAELISE-----YDVVLTTYGVLSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVA 660
S + ++V+LTTY ++ A ++S + W +V+DE H +K +S++
Sbjct: 789 STGTTKKPTSYKFNVLLTTYEMVLA------DSSHLRGVPWEVLVVDEGHRLKNSESKLF 842
Query: 661 QAAFALSSHCRWCLTGTPIQNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPRAL 720
S R LTGTP+QN++ ++++LL+FL S+ +R ++ +
Sbjct: 843 SLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPS---SFPSLSSFEERFHDLTSAEKV 899
Query: 721 KLVKGILRTLMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQF 780
+ +K ++ MLRR K+ + +PP +++ E + + ++Y A+ T++ Q
Sbjct: 900 EELKKLVAPHMLRRLKKDA------MQNIPPKTERMVPVELTSIQAEYYRAMLTKN-YQI 952
Query: 781 DQYVAQGKVLHHYANILDLLMQLRRCCNHPFLVLCGSNPQ 820
+ + +G ++L+++MQLR+ CNHP+L+ G+ P+
Sbjct: 953 LRNIGKGVAQQ---SMLNIVMQLRKVCNHPYLI-PGTEPE 988
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 983 IVFSQWTSFFDLLENPLRSR--GIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKA 1040
++FSQ T D+LE+ L + R G + R+ + FN+ + V L+S +A
Sbjct: 1024 LIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRA 1083
Query: 1041 GGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQ 1100
G+G+NL A V + D +NP + QA+ R HRIGQ ++++V R +V+ +VE R+ Q+
Sbjct: 1084 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL- 1142
Query: 1101 ARKQMMI 1107
A+K++M+
Sbjct: 1143 AKKKLML 1149
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 955 ENNMTESSKVSELMKYLERIQMSTD--EKSIVFSQWTSFFDLLENPLR------------ 1000
+NN S +++ L+ + MS D +K++VFSQ DL+E L
Sbjct: 1105 KNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFW 1164
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV--LLMSLKAGGVGLNLTAASNVFLMDP 1058
+G + R GK +R+K++D FN+ KRV L+S +AG +G+NL AA+ V ++D
Sbjct: 1165 KKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDG 1224
Query: 1059 WWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQ 1104
WNP + QAI R R GQK+ V R + + T+E ++ + Q K+
Sbjct: 1225 SWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 955 ENNMTESSKVSELMKYLERIQMSTD--EKSIVFSQWTSFFDLLENPLR------------ 1000
+NN S +++ L+ + MS D +K++VFSQ DL+E L
Sbjct: 1105 KNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFW 1164
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV--LLMSLKAGGVGLNLTAASNVFLMDP 1058
+G + R GK +R+K++D FN+ KRV L+S +AG +G+NL AA+ V ++D
Sbjct: 1165 KKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDG 1224
Query: 1059 WWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQ 1104
WNP + QAI R R GQK+ V R + + T+E ++ + Q K+
Sbjct: 1225 SWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 955 ENNMTESSKVSELMKYLERIQMSTD--EKSIVFSQWTSFFDLLENPLR------------ 1000
+NN S +++ L+ + MS D +K++VFSQ DL+E L
Sbjct: 1105 KNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFW 1164
Query: 1001 SRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRV--LLMSLKAGGVGLNLTAASNVFLMDP 1058
+G + R GK +R+K++D FN+ KRV L+S +AG +G+NL AA+ V ++D
Sbjct: 1165 KKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDG 1224
Query: 1059 WWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQ 1104
WNP + QAI R R GQK+ V R + + T+E ++ + Q K+
Sbjct: 1225 SWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 145/329 (44%), Gaps = 68/329 (20%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKTV +ALI ++ N G LI
Sbjct: 1002 GILADEMGLGKTVQVMALIA-----------YLMEFKGNY---------------GPHLI 1035
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE-----YDVVLTTYGVLSA 625
+ P A+L WK EL H+ + S+S ++Y G + ++L S+ ++V++TTY +
Sbjct: 1036 IVPNAVLVNWKSEL--HTWLPSVSC-IYYVGTKDQRSKLFSQVKFEKFNVLVTTYEFIMY 1092
Query: 626 AFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLED 685
+ S K+ W +++DEA +K +S +A+ R LTGTP+QN L++
Sbjct: 1093 ------DRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1146
Query: 686 LFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPR---------------ALKLVKGILRTL 730
L+SLL+ L + + + +H +P++ P + + IL
Sbjct: 1147 LWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPF 1206
Query: 731 MLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFD----QYVAQ 786
MLRR ED G LP ++ C S + YD + ++ D + AQ
Sbjct: 1207 MLRR--RVEDVEG----SLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQ 1260
Query: 787 GKVLHH---YANILDLLMQLRRCCNHPFL 812
++ Y + + M+LR+ CNHP L
Sbjct: 1261 KNPIYQAKIYRTLNNRCMELRKACNHPLL 1289
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 978 TDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLM 1036
T + ++FS T D+LE L+ R + Y R G + + RE + +FN ++ + L+
Sbjct: 1322 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLL 1381
Query: 1037 SLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
S++A G GLNL A V + DP NP EEQA+ R HRIGQ R+V V I V +L
Sbjct: 1382 SIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV---IYMEAVVEKL 1438
Query: 1097 QQVQARKQMMISGA--LTDD 1114
Q ++ G+ L DD
Sbjct: 1439 SSHQKEDELRSGGSVDLEDD 1458
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 145/330 (43%), Gaps = 69/330 (20%)
Query: 511 GILADAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLI 570
GILAD MGLGKTV +ALI ++ N G LI
Sbjct: 1002 GILADEMGLGKTVQVMALIA-----------YLMEFKGNY---------------GPHLI 1035
Query: 571 VCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE------YDVVLTTYGVLS 624
+ P A+L WK EL H+ + S+S ++Y G + ++L S+ ++V++TTY +
Sbjct: 1036 IVPNAVLVNWKSEL--HTWLPSVSC-IYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIM 1092
Query: 625 AAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVAQAAFALSSHCRWCLTGTPIQNSLE 684
+ S K+ W +++DEA +K +S +A+ R LTGTP+QN L+
Sbjct: 1093 Y------DRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLK 1146
Query: 685 DLFSLLHFLGAEPWCSWAWWHKLVQRPYENNDPR---------------ALKLVKGILRT 729
+L+SLL+ L + + + +H +P++ P + + IL
Sbjct: 1147 ELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEP 1206
Query: 730 LMLRRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFD----QYVA 785
MLRR ED G LP ++ C S + YD + ++ D + A
Sbjct: 1207 FMLRR--RVEDVEG----SLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRA 1260
Query: 786 QGKVLHH---YANILDLLMQLRRCCNHPFL 812
Q ++ Y + + M+LR+ CNHP L
Sbjct: 1261 QKNPIYQAKIYRTLNNRCMELRKACNHPLL 1290
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 978 TDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNK-TSEKRVLLM 1036
T + ++FS T D+LE L+ R + Y R G + + RE + +FN ++ + L+
Sbjct: 1323 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLL 1382
Query: 1037 SLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARL 1096
S++A G GLNL A V + DP NP EEQA+ R HRIGQ R+V V I V +L
Sbjct: 1383 SIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV---IYMEAVVEKL 1439
Query: 1097 QQVQARKQMMISGA--LTDD 1114
Q ++ G+ L DD
Sbjct: 1440 SSHQKEDELRSGGSVDLEDD 1459
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 949 PFKVDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLR 1008
PF+ + E+ + S K+ L + L+R+ + + ++FSQ TS D+L++ + R Y R
Sbjct: 356 PFE-EGEHLVQASGKLLVLDQLLKRLH-DSGHRVLLFSQMTSTLDILQDFMELRRYSYER 413
Query: 1009 FHGKLTQKQREKVLDEFN-KTSEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQ 1067
G + ++R + F+ S V ++S +AGGVGLNL AA V + WNP V++Q
Sbjct: 414 LDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQ 473
Query: 1068 AIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDD 1114
A+ R HRIGQ V+ + +++VE + + RK + + D+
Sbjct: 474 ALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDN 520
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 53/329 (16%)
Query: 515 DAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPM 574
D MGLGKT+ I+ + + G L++CP+
Sbjct: 77 DQMGLGKTLQAISFL--------------------------SYLKFRQGLPGPFLVLCPL 110
Query: 575 ALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISE------YDVVLTTYGVLSAAFR 628
++ W E+ + + +V R + + + + +DV+LTTY +
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIALV--- 167
Query: 629 SDGENSIYHKIQWYRVVLDEAHHIKAHKS---QVAQAAFALSSHCRWCLTGTPIQNSLED 685
+ +I W ++DEA +K S V F + R +TGTPIQN+L +
Sbjct: 168 ---DQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPR--RLLITGTPIQNNLTE 222
Query: 686 LFSLLHFLGAEPWCSWAWWHKLVQRPYE----NNDPRALKLVKGILRTLMLRRTKETEDK 741
L++L+HF + + + + + +ND K +K IL MLRRTK +
Sbjct: 223 LWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTKSLLIE 282
Query: 742 YGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHHYANILDLLM 801
G LVLPP + ++ Y ++ + + + G ++ ++ ++++
Sbjct: 283 SGN--LVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGS---NHTSLQNIVI 337
Query: 802 QLRRCCNHPFLVLCGSNPQKYADLSRLAR 830
QLR+ C+HP+L G P+ + + L +
Sbjct: 338 QLRKACSHPYL-FPGIEPEPFEEGEHLVQ 365
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 13/177 (7%)
Query: 949 PFKVDIENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLR 1008
PF+ + E+ + S K+ L + L+R+ + + ++FSQ TS D+L++ + R Y R
Sbjct: 365 PFE-EGEHLVQASGKLLVLDQLLKRLH-DSGHRVLLFSQMTSTLDILQDFMELRRYSYER 422
Query: 1009 FHGKLTQKQREKVLDEFNKTSEKR-----------VLLMSLKAGGVGLNLTAASNVFLMD 1057
G + ++R + F+ +E+ V ++S +AGGVGLNL AA V +
Sbjct: 423 LDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYE 482
Query: 1058 PWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEARLQQVQARKQMMISGALTDD 1114
WNP V++QA+ R HRIGQ V+ + +++VE + + RK + + D+
Sbjct: 483 QDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDN 539
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 136/338 (40%), Gaps = 62/338 (18%)
Query: 515 DAMGLGKTVMTIALILSNPGRSKIGNNFIDGVNDNIITNKRKNASISNNVQGGTLIVCPM 574
D MGLGKT+ I+ + + G L++CP+
Sbjct: 77 DQMGLGKTLQAISFL--------------------------SYLKFRQGLPGPFLVLCPL 110
Query: 575 ALLGQWKDELETHSAIRSISIFV------------HYGGGRTNSAELISEYDVVLTTYGV 622
++ W E+ + + +V Y + +S +DV+LTTY +
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDI 170
Query: 623 LSAAFRSDGENSIYHKIQWYRVVLDEAHHIKAHKS---QVAQAAFALSSHCRWCLTGTPI 679
+ +I W ++DEA +K S V F + R +TGTPI
Sbjct: 171 ALV------DQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPR--RLLITGTPI 222
Query: 680 QNSLEDLFSLLHFLGAEPWCSWAWWHKLVQRPYE-------NNDPRALKLVKGILRTLML 732
QN+L +L++L+HF + + + + + +ND K +K IL ML
Sbjct: 223 QNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFML 282
Query: 733 RRTKETEDKYGRPILVLPPTDIKLIECEQSESERDFYDALFTRSKVQFDQYVAQGKVLHH 792
RRTK + G LVLPP + ++ Y ++ + + + G +
Sbjct: 283 RRTKSLLIESGN--LVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGS---N 337
Query: 793 YANILDLLMQLRRCCNHPFLVLCGSNPQKYADLSRLAR 830
+ ++ ++++QLR+ C+HP+L G P+ + + L +
Sbjct: 338 HTSLQNIVIQLRKACSHPYL-FPGIEPEPFEEGEHLVQ 374
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 975 QMSTDEKSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVL 1034
QM +K ++FSQ+ ++E L + GI + + + + + K L F ++ L
Sbjct: 1189 QMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMAL 1248
Query: 1035 LMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVEA 1094
LM +G +GL+L+ ++VFLM+P W+ ++EEQ I R HR+G KR + V ++ T+E
Sbjct: 1249 LMD-GSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEE 1307
Query: 1095 RLQQV---QARKQMMISGALTDDEVRSAR----IHDL 1124
++ + + ++SG + + + R +HDL
Sbjct: 1308 QMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDL 1344
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 567 GTLIVCPMALLGQWKDELETHSAIRSISIFVHYGGGRTNSAELISEYDVVLTTYGVLSAA 626
TLIV P L+ W +++ H + I V + L +YDVV+TT+ LSA
Sbjct: 755 ATLIVVPTNLVNHWLTQIQKHVCSDQLRILVWADHIELSPHSLAWDYDVVITTFSRLSAE 814
Query: 627 FRSDGENSIYHKIQWYRVVLDEAHHIKAHKSQVA--QAAFALSSHCRWCLTGTPIQNS-- 682
+ ++ + ++ W RV+LDE H + + S Q A +L++ RW LTGTP N+
Sbjct: 815 WNPRKKSPLI-QVHWLRVMLDEGHTLGSSVSLTNKFQMAVSLTACNRWLLTGTPTPNTPN 873
Query: 683 --LEDLFSLLHFLGAEPWC-SWAWWHKLVQRPYE 713
L + LL FL E + + +W + RP+E
Sbjct: 874 SQLSHIQPLLKFLHEEVYGENPKFWEAGILRPFE 907
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 442 LTCELKPYQSQALYWMSEIEKGIDISNAESNLHPCWSAYNICNGRSIYVNIFTGEATNKF 501
+ +L P+Q A+ WM E E+ ++S+ HP + +++ +G S YVN TG+ +
Sbjct: 326 MNLKLFPHQQAAVGWMLERERKAEVSS-----HPLYLSFDTEDGFSFYVNAVTGDIITEA 380
Query: 502 PKATKMARGGILADAMGLGKTVMTIALILSNPG 534
K RGG+ D GLGKT+ ++LIL G
Sbjct: 381 APMVKDFRGGMFCDEPGLGKTITALSLILKTQG 413
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 977 STDEKSIVFSQWTSFFDLLENPLRSR-----GIGYLRFHGKLTQKQREKVLDEFNKTSEK 1031
ST EK +VFSQ+ LE + S G G + +QRE ++ FN + E
Sbjct: 634 STGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEA 693
Query: 1032 RVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNT 1091
+V S+KA G G++L AS V ++D NP+V +QA+ R +R GQKRKV + + ++
Sbjct: 694 KVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADS 753
Query: 1092 VEARLQQVQARKQMM 1106
E + RK+MM
Sbjct: 754 PEEENYETCTRKEMM 768
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18 |
chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 936 LLKSDLITCPSESPFKV--DIENNM-----TESS--KVSELMKYLERIQMSTDEKSIVFS 986
++KS + C SE K IE N+ T+S+ K+ ++ YLE + + K +VF+
Sbjct: 433 VVKSKIKDCISEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLENV-IEAGCKFLVFA 491
Query: 987 QWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKAGGVGLN 1046
S + L L+ + +G +R G R+ ++ +F E + ++S++A GVG+
Sbjct: 492 HHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGIT 551
Query: 1047 LTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVE 1093
LTAAS V + W P QA R HRIGQ V + + +TV+
Sbjct: 552 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVD 598
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 952 VDIENNMTESSKVSELMKYLERI-QMSTDEKSIVFSQWTS----FFDLLENPLR-SRGIG 1005
++IE ++ K S++M L + ++ EK ++F + F +L EN R RG
Sbjct: 1044 LEIEKLKHDAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRE 1103
Query: 1006 YLRFHGKLTQKQREKVLDEFNKTS-EKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAV 1064
L G L +R +V+D+F + + RVLL S+ A G++LTAAS V ++D WNP+
Sbjct: 1104 LLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSK 1163
Query: 1065 EEQAIMRIHRIGQKRKVIVRRFIVKNTVE 1093
+QAI R R GQ++ V V + + + T+E
Sbjct: 1164 TKQAIARAFRPGQQKVVYVYQLLSRGTLE 1192
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 8/146 (5%)
Query: 954 IENNMTESSKVSELMKYLERIQMSTDEKSIVFSQWTS----FFDLLENPLR-SRGIGYLR 1008
++++ + SKV ++ + R+ EK ++F + F +L EN R RG L
Sbjct: 1055 LKHDAKKGSKVMFVLNLIFRV--VKREKILIFCHNIAPIRMFTELFENIFRWQRGREILT 1112
Query: 1009 FHGKLTQKQREKVLDEFNKTSE-KRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQ 1067
G L +R +V+D+F + RVLL S+ A G++LTAAS V ++D WNP+ +Q
Sbjct: 1113 LTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQ 1172
Query: 1068 AIMRIHRIGQKRKVIVRRFIVKNTVE 1093
AI R R GQ++ V V + + + T+E
Sbjct: 1173 AIARAFRPGQQKVVYVYQLLSRGTLE 1198
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%)
Query: 981 KSIVFSQWTSFFDLLENPLRSRGIGYLRFHGKLTQKQREKVLDEFNKTSEKRVLLMSLKA 1040
K +VF+ D ++ + +GIG++R G + R+ + F +SE ++ ++ ++A
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEA 615
Query: 1041 GGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNTVE 1093
GGVGL+ +AA NV ++ P++ QA R HR GQ V V F K+T++
Sbjct: 616 GGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMD 668
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 977 STDEKSIVFSQWT---SFFDLLENPLRSRGIGYLRF--HGKLTQKQREKVLDEFNKTSEK 1031
S EK +VFSQ+ F + L + +G F G + +QRE ++ FN + +
Sbjct: 708 SAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDA 767
Query: 1032 RVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVIVRRFIVKNT 1091
++ S+KA G G++L AS + ++D NP+V QAI R R GQK+ V R I ++
Sbjct: 768 KIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSS 827
Query: 1092 VEARLQQVQARKQMM 1106
E +K+++
Sbjct: 828 PEEEDHNTCFKKEVI 842
>AT1G18660.4 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6421433-6425489 FORWARD LENGTH=491
Length = 491
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 886 QKGDTVECSICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCP 945
++ D +C++C+ +P TPC H FCR CLF G CP+CR + + TC
Sbjct: 189 ERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR--GNKCPLCRTVIFMTPR-TCA 245
Query: 946 SESPFKVDIENNMTE 960
IE N E
Sbjct: 246 VSVTLNNIIEKNFPE 260
>AT1G18660.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6421433-6425565 FORWARD LENGTH=486
Length = 486
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 886 QKGDTVECSICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCP 945
++ D +C++C+ +P TPC H FCR CLF G CP+CR + + TC
Sbjct: 189 ERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR--GNKCPLCRTVIFMTPR-TCA 245
Query: 946 SESPFKVDIENNMTE 960
IE N E
Sbjct: 246 VSVTLNNIIEKNFPE 260
>AT1G18660.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6421433-6425565 FORWARD LENGTH=486
Length = 486
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 886 QKGDTVECSICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCP 945
++ D +C++C+ +P TPC H FCR CLF G CP+CR + + TC
Sbjct: 189 ERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR--GNKCPLCRTVIFMTPR-TCA 245
Query: 946 SESPFKVDIENNMTE 960
IE N E
Sbjct: 246 VSVTLNNIIEKNFPE 260
>AT1G18660.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6421433-6425565 FORWARD LENGTH=486
Length = 486
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 886 QKGDTVECSICMDSPDDPVFTPCAHRFCRECLFNCWGNSAGGNCPICRQSLLKSDLITCP 945
++ D +C++C+ +P TPC H FCR CLF G CP+CR + + TC
Sbjct: 189 ERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR--GNKCPLCRTVIFMTPR-TCA 245
Query: 946 SESPFKVDIENNMTE 960
IE N E
Sbjct: 246 VSVTLNNIIEKNFPE 260