Miyakogusa Predicted Gene

Lj0g3v0282219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0282219.1 Non Chatacterized Hit- tr|B7ZX16|B7ZX16_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,43.1,8e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; HR_lesion,HR-like
lesion-inducer,CUFF.18781.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43460.1 | Symbols:  | HR-like lesion-inducing protein-relate...   168   1e-42
AT1G04340.1 | Symbols:  | HR-like lesion-inducing protein-relate...   164   2e-41
AT4G14420.1 | Symbols:  | HR-like lesion-inducing protein-relate...   120   5e-28
AT3G23180.1 | Symbols:  | HR-like lesion-inducing protein-relate...    57   7e-09
AT3G23175.1 | Symbols:  | HR-like lesion-inducing protein-relate...    54   3e-08
AT3G23190.1 | Symbols:  | HR-like lesion-inducing protein-relate...    49   1e-06

>AT5G43460.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr5:17460007-17461492 FORWARD LENGTH=154
          Length = 154

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 113/157 (71%), Gaps = 5/157 (3%)

Query: 1   MGFASFLGRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDI 60
           MGF SFLGR+LFASLFILSAWQM+     +GGP AKEL PKL ++K +LSS+LGV LP I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMF----NDGGPAAKELAPKLDLVKAHLSSRLGVTLPKI 56

Query: 61  DEQHFVATIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLLLN 120
           + +  VATII LKG+GG+LFV G+T GA+              DFYNYGP +  + LLL 
Sbjct: 57  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 116

Query: 121 DFMLNTAVFGALLFFIGMKNTIP-RRQLRKKTPKTKT 156
           +F+ + A+FGALLFFIGMKN+ P ++ L+K+TPK K 
Sbjct: 117 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPKA 153


>AT1G04340.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr1:1163345-1164737 REVERSE LENGTH=159
          Length = 159

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 2/158 (1%)

Query: 1   MGFASFLGRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDI 60
           MGF SFLGR+LFASLFILSAWQM+ +F  +GGP AKEL PKL + K +LSS LGV LP++
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DEQHFVATIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLLLN 120
           + +  V  I+ LKGLGG+LFV G+  GA+              DFYNYGP   ++ LLL 
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 DFMLNTAVFGALLFFIGMKN--TIPRRQLRKKTPKTKT 156
           +F+ + A+ GALLFFIGMKN  T  +R L+K+TPK K 
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPKA 158


>AT4G14420.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr4:8302171-8303738 REVERSE LENGTH=158
          Length = 158

 Score =  120 bits (300), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 94/157 (59%), Gaps = 1/157 (0%)

Query: 1   MGFASFLGRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDI 60
           M  ASFLGR LF S+F+LSAWQ + +F  +GG  AK L PK      ++++  G  LP +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DEQHFVATIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLLLN 120
           D +  VA  I LKG+GG+LFVFGS+LGA+              DFYNY   + E+  L +
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 DFMLNTAVFGALLFFIGMKNTIPR-RQLRKKTPKTKT 156
            F  + A+ G LLFFIGMKN+    RQLRKK PK K 
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKA 157


>AT3G23180.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr3:8277131-8278396 FORWARD LENGTH=217
          Length = 217

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 7   LGRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDIDEQHFV 66
           +GR LFAS F LS+W  Y+E  AN         PK              G      +H +
Sbjct: 24  IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKF-------------GYSGDQIKHLM 70

Query: 67  ATIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLL 118
              I ++ LGG++F++GS  GAF              DFYN+     E+ LL
Sbjct: 71  TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLL 122


>AT3G23175.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr3:8274202-8274973 REVERSE LENGTH=169
          Length = 169

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 5   SFLGRLLFASLFILSAWQMYVEF--DANGGPIAKELIPKLTVLKKNLSSKL----GVGLP 58
           +F GR+ F+ +F ++A Q Y +      GGP+ K + P + +L K  S  L    G+ + 
Sbjct: 24  AFFGRMAFSFVFFITAIQDYADHYGGGAGGPLEKTMGPAVNMLSKYGSKALTFYFGMQVV 83

Query: 59  DIDEQHFVATIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLL 118
             D +     +I  K    + F+FG ++ A+F              F    P    +   
Sbjct: 84  AFDVRLIEFALISAKATAALWFIFGQSIPAYFLLATQI--------FSTVIP----FPTN 131

Query: 119 LNDFMLNTAVFGALLFFIGMKNTIPRRQLRKKTPKTK 155
           LNDF  N  + GALL++IG+K+T+      +K  +T+
Sbjct: 132 LNDFTQNLTLIGALLYYIGLKHTVDNLDDEEKNKQTE 168


>AT3G23190.1 | Symbols:  | HR-like lesion-inducing protein-related |
           chr3:8279445-8280663 FORWARD LENGTH=216
          Length = 216

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 17/115 (14%)

Query: 8   GRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDIDEQHFVA 67
           GR++FAS F++SAW+ Y  F    G  A EL PKL   +    + + +G           
Sbjct: 25  GRVVFASAFLVSAWREYYGF----GLAADELRPKLGFFENQAKAIVALG----------- 69

Query: 68  TIIFLKGLGGILFVFGSTLGAFFXXXXXXXXXXXXXDFYNYGPSKPEYHLLLNDF 122
             I +K +GGILF+F + +GA               DFYN    +  + +    F
Sbjct: 70  --ILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKF 122