Miyakogusa Predicted Gene

Lj0g3v0281769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281769.1 Non Chatacterized Hit- tr|I1LGI1|I1LGI1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42609
PE,85.14,0,Tetratricopeptide repeats,Tetratricopeptide repeat;
seg,NULL; no description,Tetratricopeptide-like ,CUFF.18740.1
         (530 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48150.1 | Symbols: APC8, CDC23 | anaphase-promoting complex ...   786   0.0  
AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein | chr...   120   2e-27
AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-l...   117   2e-26
AT5G56290.1 | Symbols: PEX5, ATPEX5 | peroxin 5 | chr5:22786655-...    59   1e-08
AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like...    57   2e-08
AT2G06210.1 | Symbols: ELF8, VIP6 | binding | chr2:2429108-24365...    53   6e-07

>AT3G48150.1 | Symbols: APC8, CDC23 | anaphase-promoting complex
           subunit 8 | chr3:17779800-17782565 REVERSE LENGTH=579
          Length = 579

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/496 (74%), Positives = 421/496 (84%)

Query: 31  PARKLQHPLESDRYPRAKSYFDCREYRRAAHVLRDQSGRKSLFLRCYALYLAGXXXXXXX 90
           P  +    ++ D Y  AKSYFDCREYRRA+H+LRDQ  +KSLFLR YALYLAG       
Sbjct: 83  PLPEEDEAIDGDIYLLAKSYFDCREYRRASHMLRDQVSKKSLFLRYYALYLAGEKRKEEE 142

Query: 91  XXXXXGPLGKGDVVNRELVPLERELSELRKNAMIDPFGLYVYGLVLKQKGNENLARTVLV 150
                GPLGK D +NRELV LER+LS LR+   ID FGLY+YG+VLK+KGNE+LAR  LV
Sbjct: 143 MIELEGPLGKSDAINRELVSLERDLSALRRTGAIDSFGLYLYGVVLKEKGNESLARASLV 202

Query: 151 ESVNSYPWNWTAWSELQSLCTTIDILNSLNLNSHWMKDFFLASAYQELRMHNECLSKYEY 210
           ESVNSYPWNW+AWSELQSLCT+I+ILNSLNLN+HWMK+FFL +AYQELRMH E L+KYEY
Sbjct: 203 ESVNSYPWNWSAWSELQSLCTSIEILNSLNLNNHWMKEFFLGNAYQELRMHTESLAKYEY 262

Query: 211 LQGTFGYSNYIQAQVAKAQYSLREFDQVEAIFEELLRTDPYRVEDMDMYSNVLYAKECSA 270
           LQG F +SNYIQAQ AKAQYSLREFDQVE +FEELLR DPYRVEDMD+YSNVLYAKE  A
Sbjct: 263 LQGIFSFSNYIQAQTAKAQYSLREFDQVEIMFEELLRNDPYRVEDMDLYSNVLYAKEACA 322

Query: 271 ALSYLAHRVFMTDKYRPESCCIIGNYYSLKGQHEKSVIYFRRALKLNKNYLSAWTLMGHE 330
           ALSYLAH+VF+TDKYRPESCCIIGNYYSLKGQHEK+V+YFRRALKLNK YLSAWTLMGHE
Sbjct: 323 ALSYLAHKVFLTDKYRPESCCIIGNYYSLKGQHEKAVMYFRRALKLNKKYLSAWTLMGHE 382

Query: 331 FVEMKNTPAAVDAYRRAVDIDPCDYRAWYGLGQAYEMMGMPLYALHYCKKSVFLQPKDSR 390
           +VEMKNTPAA+DAYRRAVDI+P DYRAWYGLGQAYEMMGMP YALHY +KS+F  P DSR
Sbjct: 383 YVEMKNTPAAIDAYRRAVDINPTDYRAWYGLGQAYEMMGMPFYALHYFRKSIFFLPNDSR 442

Query: 391 LWIAMAHCYETDQLRMLDLAIKCYKRAADCNDREAIALHQLAKLHVELGRPEEAAFYYQK 450
           LWIAMA CY+T+QL ML+ AIKCYKRA +C D E IAL+QLAKLH +LGR EEAA+Y++K
Sbjct: 443 LWIAMAKCYQTEQLYMLEEAIKCYKRAVNCTDTEGIALNQLAKLHQKLGRNEEAAYYFEK 502

Query: 451 DLERMESEERDGPNMVEALSYLATFCKAKKRFEEAEVYCTRLLDYTGPERETAKNLLRGM 510
           DLERM++E  +GPNM EAL +LAT  K  K+FEEAEVYCTRLLDY+GPE+E AK+LLRG+
Sbjct: 503 DLERMDAEGLEGPNMFEALVFLATHFKNHKKFEEAEVYCTRLLDYSGPEKEKAKSLLRGI 562

Query: 511 RSTQSSLPLMDVEHFP 526
           R  Q+  P MD+EHFP
Sbjct: 563 RMAQTGFPSMDLEHFP 578


>AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein |
           chr2:8632324-8636900 REVERSE LENGTH=744
          Length = 744

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 9/301 (2%)

Query: 203 ECLSKYEYLQGTFGYSNYIQAQVAKAQYSLREFDQVEAIFEELLRTDPYRVEDMDMYSNV 262
           E L  Y  L      + ++ +QV KA + L ++ + E  F       PY +E MD+YS V
Sbjct: 434 EALDTYMKLPHKHYNTGWVLSQVGKAYFELIDYLEAEKAFRLARLASPYCLEGMDIYSTV 493

Query: 263 LYAKECSAALSYLAHRVFMTDKYRPESCCIIGNYYSLKGQHEKSVIYFRRALKLNKNYLS 322
           LY  +    LSYLA  +  TD+  P+S C +GN YSL+  HE ++  F RA++LN  +  
Sbjct: 494 LYHLKEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKNFLRAVQLNPRFAY 553

Query: 323 AWTLMGHEFVEMKNTPAAVDAYRRAVDIDPCDYRAWYGLGQAYEMMGMPLYALHYCKKSV 382
           A TL GHE+  +++    + +Y+ A+ +D   Y AWYGLG  Y       ++ H+ + + 
Sbjct: 554 AHTLCGHEYTTLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQEKLEFSEHHFRMAF 613

Query: 383 FLQPKDSRLWIAMAHCYETDQLRMLDLAIKCYKRAADCNDREAIALHQLAKLHVELGRPE 442
            + P  S +   +        L+  + A++  ++A   + +  + ++Q A + V L R +
Sbjct: 614 LINPSSSVIMSYLGTSLHA--LKRSEEALEIMEQAIVADRKNPLPMYQKANILVCLERLD 671

Query: 443 EAAFYYQKDLERMESEERDGPNMVEALSYLATFCKAKKRFEEAEVYCTRLLDYTGPERET 502
           EA       LE +E  +   P+     + +    K +   ++A ++    LD   P  + 
Sbjct: 672 EA-------LEVLEELKEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKPPATDV 724

Query: 503 A 503
           A
Sbjct: 725 A 725


>AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:5529534-5534465 FORWARD
           LENGTH=717
          Length = 717

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 190 FLASAYQELRMH--NECLSKYEYLQGTFGYSNYIQAQVAKAQYSLREFDQVEAIFEELLR 247
            L   ++ L M+   E L  Y+ L      ++++  QV KA + L+++   ++ F    +
Sbjct: 390 ILGDGHRHLHMYKCQEALLAYQKLSQKQYNTHWVLMQVGKAYFELQDYFNADSSFTLAHQ 449

Query: 248 TDPYRVEDMDMYSNVLYAKECSAALSYLAHRVFMTDKYRPESCCIIGNYYSLKGQHEKSV 307
             PY +E MD YS VLY  +    L YLA  +   D+  PES C +GN YSL+  H+ ++
Sbjct: 450 KYPYALEGMDTYSTVLYHLKEEMRLGYLAQELISVDRLSPESWCAVGNCYSLRKDHDTAL 509

Query: 308 IYFRRALKLNKNYLSAWTLMGHEFVEMKNTPAAVDAYRRAVDIDPCDYRAWYGLGQAYEM 367
             F+RA++LN+ +  A TL GHEF  ++    A   YR+A+ ID   Y AWYGLG  Y  
Sbjct: 510 KMFQRAIQLNERFTYAHTLCGHEFAALEEFEDAERCYRKALGIDTRHYNAWYGLGMTYLR 569

Query: 368 MGMPLYALHYCKKSVFLQPKDSRLW----IAMAHCYETDQ-LRMLDLAI 411
                +A H  + ++ + P+ S +     IA+      D+ L M++ A+
Sbjct: 570 QEKFEFAQHQFQLALQINPRSSVIMCYYGIALHESKRNDEALMMMEKAV 618


>AT5G56290.1 | Symbols: PEX5, ATPEX5 | peroxin 5 |
           chr5:22786655-22791972 FORWARD LENGTH=728
          Length = 728

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%)

Query: 291 CIIGNYYSLKGQHEKSVIYFRRALKLNKNYLSAWTLMGHEFVEMKNTPAAVDAYRRAVDI 350
            ++G  Y+L  + ++++  F+ AL+L  N  S W  +G        +  A+ AY++A+D+
Sbjct: 594 IVLGVLYNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDL 653

Query: 351 DPCDYRAWYGLGQAYEMMGMPLYALHYCKKSVFLQPKDSRLW 392
            P   RAW  +G +Y   GM   ++ Y  +++ + PK    W
Sbjct: 654 KPNYVRAWANMGISYANQGMYKESIPYYVRALAMNPKADNAW 695


>AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1114187-1120722 REVERSE
           LENGTH=977
          Length = 977

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 15/259 (5%)

Query: 230 YSLREFDQVEAIFEELLRTDPYRVEDMDMYSNVLYAKECSAALSYLAHRVFMTDKYRP-- 287
           Y L+E+D   A  EE LR  P   E    Y N+  A +             +  + RP  
Sbjct: 98  YQLQEYDMCIARNEEALRIQPQFAE---CYGNMANAWKEKGDTDRAIRYYLIAIELRPNF 154

Query: 288 -ESCCIIGNYYSLKGQHEKSVIYFRRALKLNKNYLSAWTLMGHEFVEMKNTPAAVDAYRR 346
            ++   + + Y  KG+  ++    ++AL LN   + A + +G+          A   Y  
Sbjct: 155 ADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLE 214

Query: 347 AVDIDPCDYRAWYGLGQAYEMMGMPLYALHYCKKSVFLQPKDSRLWIAMAHCYETDQLRM 406
           AV I P    AW  L   +   G    AL Y K++V L+P     ++ + + Y+   L  
Sbjct: 215 AVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKA--LGR 272

Query: 407 LDLAIKCYKRAADCNDREAIALHQLAKLHVELGRPEEAAFYYQKDLERMESEERDGPNMV 466
              AI CY+ A       A+A   +A ++ E G+ + A  +Y++ L R        P  +
Sbjct: 273 PTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSR-------DPRFL 325

Query: 467 EALSYLATFCKAKKRFEEA 485
           EA + L    K   R +EA
Sbjct: 326 EAYNNLGNALKDIGRVDEA 344



 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)

Query: 293 IGNYYSLKGQHEKSVIYFRRALKLNKNYLSAWTLMGHEFVEMKNTPAAVDAYRRAVDIDP 352
           +GN    +G   ++   +  A+++   +  AW+ +   F+E  +   A+  Y+ AV + P
Sbjct: 195 LGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 254

Query: 353 CDYRAWYGLGQAYEMMGMPLYALHYCKKSVFLQPKDSRLWIAMAHC-YETDQLRMLDLAI 411
               A+  LG  Y+ +G P  A+   + ++ ++P  +  +  +A   YE  Q   LDLAI
Sbjct: 255 AFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQ---LDLAI 311

Query: 412 KCYKRAADCNDREAIALHQLAKLHVELGRPEEAAFYYQKDL 452
           + YK+A   + R   A + L     ++GR +EA   Y + L
Sbjct: 312 RHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCL 352


>AT2G06210.1 | Symbols: ELF8, VIP6 | binding | chr2:2429108-2436588
           REVERSE LENGTH=1091
          Length = 1091

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 44/212 (20%)

Query: 229 QYSLREFDQVEAIFEELLRTDPYRVED------MDMYSN-----------VLYAKE---- 267
           +Y L + D+    F+ +L+ DP  VE       MD+ +N           +  A E    
Sbjct: 207 RYKLGQLDKARQAFDRVLQLDPDNVEALVALGIMDLQANDSIGMRKGMDRMQQAFEIYPY 266

Query: 268 CSAALSYLAHRVFMTDKY-------------------RPESCCIIGNYYSLKGQHEKSVI 308
           C++AL+YLA+  F T ++                   +  S   +   Y  KG  EK+ +
Sbjct: 267 CASALNYLANHFFFTGQHFLVEQLTETALAVTTHGPTKSHSFYNLARSYHSKGDFEKAGM 326

Query: 309 YFRRALKLNKN----YLSAWTLMGHEFVEMKNTPAAVDAYRRAVDIDPCDYRAWYGLGQA 364
           Y+  A+K   N    ++  +  +G   +++     +V  + + +++ P +      LG  
Sbjct: 327 YYMAAIKETNNNPHEFVFPYFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHL 386

Query: 365 YEMMGMPLYALHYCKKSVFLQPKDSRLWIAMA 396
           Y  +G    AL Y +K+  L P+D++ ++ + 
Sbjct: 387 YTQLGQNEKALEYMRKATKLDPRDAQAFVGLG 418