Miyakogusa Predicted Gene

Lj0g3v0281579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281579.1 tr|Q3Y543|Q3Y543_PHYPA Sucrose-phosphate synthase
2 OS=Physcomitrella patens subsp. patens PE=2
SV=1,38.24,1e-18,SUCROSE-PHOSPHATE SYNTHASE,NULL;
GLYCOSYLTRANSFERASE,NULL; seg,NULL;
UDP-Glycosyltransferase/glycoge,gene.g21871.t1.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04920.1 | Symbols: ATSPS3F, SPS3F | sucrose phosphate syntha...   191   4e-49
AT5G20280.1 | Symbols: ATSPS1F, SPS1F | sucrose phosphate syntha...   117   1e-26
AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2, SPS2F | sucrose phos...   110   1e-24
AT4G10120.2 | Symbols: ATSPS4F | Sucrose-phosphate synthase fami...   110   1e-24
AT4G10120.1 | Symbols: ATSPS4F | Sucrose-phosphate synthase fami...   110   1e-24
AT1G73370.1 | Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:...    55   4e-08
AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:...    55   4e-08
AT1G73370.2 | Symbols: SUS6 | sucrose synthase 6 | chr1:27584533...    55   4e-08
AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 ...    55   7e-08
AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 ...    55   7e-08
AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | sucrose synthase 2 | ...    54   1e-07
AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:...    53   3e-07

>AT1G04920.1 | Symbols: ATSPS3F, SPS3F | sucrose phosphate synthase
           3F | chr1:1391674-1395756 REVERSE LENGTH=1062
          Length = 1062

 Score =  191 bits (486), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 168/318 (52%), Gaps = 73/318 (22%)

Query: 12  QGVFINPALVEPFGLTLI-----------------------------------EAVAHGL 36
           +GVFINPALVEPFGLTLI                                   EA+A+ L
Sbjct: 577 KGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANAL 636

Query: 37  -PMVTTKN-------EGPVDIH-----------------------QVLNNGLHVDPHDQQ 65
             +V+ KN        G  +IH                       Q   +   V   D +
Sbjct: 637 LKLVSEKNLWHECRINGWKNIHLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDE 696

Query: 66  AITNALIKLLSEKNL-LSIDGDLAAASSGTE--MQDQVKRVLSKMRKXXXXXXXXXXXXX 122
              N  +K + + +L LS+DGD  + +   E    D VK+++S+MR              
Sbjct: 697 FSLNDSLKDVQDMSLRLSMDGDKPSLNGSLEPNSADPVKQIMSRMR-TPEIKSKPELQGK 755

Query: 123 KLPDNVTGKYPLLRRRHRLIVIALDFYETDGDPDKK-MTQIVQRIIKALQLDSQYARVSG 181
           K  DN+  KYP+LRRR RL+V+A+D Y+ +G PD+K M  ++Q IIKA++ D Q A+ SG
Sbjct: 756 KQSDNLGSKYPVLRRRERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSG 815

Query: 182 LALSTAMPMLETIEILKSGNIQVNDFDVLICSSGSEVYYPGTYTGDGKLFPDPDYAAHID 241
            A+ST+MP+ E    LKS  IQV++FD LICSSGSEVYYPG    +GKL PDPDY++HID
Sbjct: 816 FAISTSMPLDELTRFLKSAKIQVSEFDTLICSSGSEVYYPGGE--EGKLLPDPDYSSHID 873

Query: 242 YRWFCKGLKKAIWKLINT 259
           YRW  +GLK  +WKL+NT
Sbjct: 874 YRWGMEGLKNTVWKLMNT 891


>AT5G20280.1 | Symbols: ATSPS1F, SPS1F | sucrose phosphate synthase
           1F | chr5:6844994-6849997 REVERSE LENGTH=1043
          Length = 1043

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 65/71 (91%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +GVFINPA++EPFGLTLIEA AHGLPMV TKN GPVDIH+VL+NGL VDPHDQQ+I+ AL
Sbjct: 569 KGVFINPAIIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEAL 628

Query: 72  IKLLSEKNLLS 82
           +KL+++K+L +
Sbjct: 629 LKLVADKHLWA 639



 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 6/125 (4%)

Query: 129 TGKYPLLRRRHRLIVIALDFYETDGDPDKKMTQIVQRIIKALQLDSQYARVSGLALSTAM 188
           +GK+P +RRR  ++VIALDF   DG+ D    +  +RI+ A++ +     V G  LST++
Sbjct: 755 SGKFPAVRRRKFIVVIALDF---DGEED--TLEATKRILDAVEKERAEGSV-GFILSTSL 808

Query: 189 PMLETIEILKSGNIQVNDFDVLICSSGSEVYYPGTYTGDGKLFPDPDYAAHIDYRWFCKG 248
            + E    L SG +  NDFD  IC+SGS+++Y      DG    D  Y +HI+YRW  +G
Sbjct: 809 TISEVQSFLVSGGLNPNDFDAFICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEG 868

Query: 249 LKKAI 253
           L+K +
Sbjct: 869 LRKTL 873


>AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2, SPS2F | sucrose
           phosphate synthase 2F | chr5:3536426-3540901 FORWARD
           LENGTH=1047
          Length = 1047

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 60/69 (86%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +GVFINPA +EPFGLTLIEA AHGLP V T N GPVDIH+VL+NGL VDPHDQQAI +AL
Sbjct: 571 KGVFINPAFIEPFGLTLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADAL 630

Query: 72  IKLLSEKNL 80
           +KL+S++ L
Sbjct: 631 LKLVSDRQL 639



 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 81  LSIDGDLAAASSGTEMQDQVKRVLSKMRKXXXXXXXXXXXXXKLPDNVTGKYPLLRRRHR 140
           LS+DG+ + +++G +     +   ++ +              K  +    K P L+RR  
Sbjct: 706 LSLDGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQKSKPTEKFDSKMPTLKRRKN 765

Query: 141 LIVIALDFYETDGDPDKKMTQIVQRIIKALQLDSQYARVSGLALSTAMPMLETIEILKSG 200
           + VI++D   T       +  +V+ +I A    S     +G  LST+M + ET   L SG
Sbjct: 766 IFVISVDCSAT-----SDLLAVVKTVIDAAGRGSS----TGFILSTSMTISETHTALLSG 816

Query: 201 NIQVNDFDVLICSSGSEVYYPGTYTGDGKLFP---DPDYAAHIDYRWFCKGLKKAIWKLI 257
            ++  DFD +ICSSGSE+Y+  + + D    P   D DY +HI++RW  + L+K + + I
Sbjct: 817 GLKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWI 876

Query: 258 NTAEG-----------EEKSSQTN 270
           ++ E            E++SS TN
Sbjct: 877 SSVEEKKKTKKGEILVEDESSSTN 900


>AT4G10120.2 | Symbols: ATSPS4F | Sucrose-phosphate synthase family
           protein | chr4:6315033-6319785 FORWARD LENGTH=1050
          Length = 1050

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 63/71 (88%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +GVFINPALVEPFGLTLIEA A+GLP+V T+N GPVDI + LNNGL VDPHDQQAI++AL
Sbjct: 596 KGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDAL 655

Query: 72  IKLLSEKNLLS 82
           +KL++ K+L +
Sbjct: 656 LKLVANKHLWA 666



 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 6/128 (4%)

Query: 137 RRHRLIVIALDFYETDGDPDKKMTQIVQRIIKALQLDSQYARVSGLALSTAMPMLETIEI 196
           RR  L V+A+D Y+ +G+    + +I++ +IKA  L S   ++ G  L++   + E ++I
Sbjct: 771 RRQMLFVVAVDSYDDNGNIKANLNEIIKNMIKAADLTSGKGKI-GFVLASGSSLQEVVDI 829

Query: 197 LKSGNIQVNDFDVLICSSGSEVYYPGTYTGDGKLFPDPDYAAHIDYRWFCKGLKKAIWKL 256
            +   I + DFD ++C+SGSE+YYP        +  D DY  H++Y+W  + ++  I +L
Sbjct: 830 TQKNLINLEDFDAIVCNSGSEIYYPWR-----DMMVDADYETHVEYKWPGESIRSVILRL 884

Query: 257 INTAEGEE 264
           I T    E
Sbjct: 885 ICTEPAAE 892


>AT4G10120.1 | Symbols: ATSPS4F | Sucrose-phosphate synthase family
           protein | chr4:6315033-6319785 FORWARD LENGTH=1050
          Length = 1050

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 63/71 (88%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +GVFINPALVEPFGLTLIEA A+GLP+V T+N GPVDI + LNNGL VDPHDQQAI++AL
Sbjct: 596 KGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDAL 655

Query: 72  IKLLSEKNLLS 82
           +KL++ K+L +
Sbjct: 656 LKLVANKHLWA 666



 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 6/128 (4%)

Query: 137 RRHRLIVIALDFYETDGDPDKKMTQIVQRIIKALQLDSQYARVSGLALSTAMPMLETIEI 196
           RR  L V+A+D Y+ +G+    + +I++ +IKA  L S   ++ G  L++   + E ++I
Sbjct: 771 RRQMLFVVAVDSYDDNGNIKANLNEIIKNMIKAADLTSGKGKI-GFVLASGSSLQEVVDI 829

Query: 197 LKSGNIQVNDFDVLICSSGSEVYYPGTYTGDGKLFPDPDYAAHIDYRWFCKGLKKAIWKL 256
            +   I + DFD ++C+SGSE+YYP        +  D DY  H++Y+W  + ++  I +L
Sbjct: 830 TQKNLINLEDFDAIVCNSGSEIYYPWR-----DMMVDADYETHVEYKWPGESIRSVILRL 884

Query: 257 INTAEGEE 264
           I T    E
Sbjct: 885 ICTEPAAE 892


>AT1G73370.1 | Symbols: SUS6, ATSUS6 | sucrose synthase 6 |
           chr1:27584533-27588326 REVERSE LENGTH=942
          Length = 942

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHD 63
           +GVF+ PAL E FGLT+IEA+  GLP   T   GP +I     +G H+DP++
Sbjct: 670 KGVFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNN 721


>AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 |
           chr3:15179204-15182577 REVERSE LENGTH=808
          Length = 808

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +G F+ PAL E FGLT++EA+  GLP   T N GP +I     +G H+DP+       +L
Sbjct: 665 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESL 724

Query: 72  IKLLSE 77
               ++
Sbjct: 725 ADFFTK 730


>AT1G73370.2 | Symbols: SUS6 | sucrose synthase 6 |
           chr1:27584533-27588088 REVERSE LENGTH=898
          Length = 898

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHD 63
           +GVF+ PAL E FGLT+IEA+  GLP   T   GP +I     +G H+DP++
Sbjct: 626 KGVFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNN 677


>AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 |
           chr5:7050599-7054032 REVERSE LENGTH=808
          Length = 808

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPH--DQQAITN 69
           +G F+ PAL E FGLT++EA+  GLP   T   GP +I     +G H+DP+  DQ A T 
Sbjct: 665 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTL 724

Query: 70  A 70
           A
Sbjct: 725 A 725


>AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1 |
           chr5:7050599-7054032 REVERSE LENGTH=808
          Length = 808

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPH--DQQAITN 69
           +G F+ PAL E FGLT++EA+  GLP   T   GP +I     +G H+DP+  DQ A T 
Sbjct: 665 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTL 724

Query: 70  A 70
           A
Sbjct: 725 A 725


>AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | sucrose synthase 2 |
           chr5:19943369-19947189 REVERSE LENGTH=807
          Length = 807

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDPHDQQAITNAL 71
           +GVF+ PA  E FGLT++E++   LP   T + GP +I +   +G H+DP+    +   L
Sbjct: 663 KGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATL 722

Query: 72  IKLLSEKN 79
           +      N
Sbjct: 723 VSFFETCN 730


>AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 |
           chr4:995166-998719 FORWARD LENGTH=809
          Length = 809

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 12  QGVFINPALVEPFGLTLIEAVAHGLPMVTTKNEGPVDIHQVLNNGLHVDP-HDQQA 66
           +G F  PA  E FGLT++EA+  GLP   T + GP +I +   +G H+DP H +QA
Sbjct: 666 RGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQA 721