Miyakogusa Predicted Gene

Lj0g3v0281249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281249.1 tr|Q9SI42|Q9SI42_ARATH At2g13350 OS=Arabidopsis
thaliana GN=At2g13350 PE=2 SV=1,42.96,4e-18,seg,NULL,44481_g.1
         (149 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    97   4e-21
AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    96   9e-21
AT2G13350.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    75   2e-14

>AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:14119526-14121334 REVERSE
           LENGTH=602
          Length = 602

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 77/143 (53%), Gaps = 21/143 (14%)

Query: 1   MRSNLGNIRPVVMTESELGPSPSEVAAVMAR-RPRIEEGEISTVGGWSLDE--SVEGLQS 57
           MRSNL   RPV +TESELGPSPSEVA  MA+ R +  E E S +  WSLD+  ++EGL+S
Sbjct: 436 MRSNLAG-RPV-LTESELGPSPSEVAQKMAKERSQAYETESSILSEWSLDDDSNIEGLRS 493

Query: 58  KLERWRTELPPVIDRGEFSSYPXXX--------------XXXXXXXXXXXXXXXXXXXXX 103
           KLERWRTELPP+ D G  SS+                                       
Sbjct: 494 KLERWRTELPPLYDLG--SSHQSSDVGSGAMVVANVGGGKSSRKKTPAVKKKHNRRHTEG 551

Query: 104 XXXXLFSCFSTICGVECSIVCGG 126
               LFSCFS +CGVEC+ VCGG
Sbjct: 552 GGNGLFSCFSNLCGVECTFVCGG 574


>AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:1237256-1239061 FORWARD
           LENGTH=601
          Length = 601

 Score = 95.9 bits (237), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 70/127 (55%), Gaps = 13/127 (10%)

Query: 12  VMTESELGPSPSEVAAVMARRPRIEEGEISTVGGWSLDES-VEGLQSKLERWRTELPPVI 70
           ++TESELGPSPSEVA  +A+  R  E E S +  WS+DES +EGL+SKLERWRTELPP+ 
Sbjct: 445 ILTESELGPSPSEVADKLAK-DRSHETESSILSEWSIDESSIEGLRSKLERWRTELPPLY 503

Query: 71  DRG---------EFSSYPXXXX--XXXXXXXXXXXXXXXXXXXXXXXXLFSCFSTICGVE 119
           D G         + +S P                              LFSCFS ICGVE
Sbjct: 504 DIGSSHISSTDYDGASVPAATAGGGMSSRRKTPTTKKHNRRHTDGGNGLFSCFSKICGVE 563

Query: 120 CSIVCGG 126
           CS VCGG
Sbjct: 564 CSFVCGG 570


>AT2G13350.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:5536525-5537730 REVERSE
           LENGTH=401
          Length = 401

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 30/142 (21%)

Query: 9   RPVVMTESELGPSPSEVAAVMARRPRI----EEGEISTVGGWSLDESVEGLQSKLERWRT 64
           RP+V+TES+LGPS S VAA +A+   +     E  + +VG    + SVEGL+SKLERW+ 
Sbjct: 252 RPIVITESDLGPSASVVAAQIAKEKALTGKDAESTVISVG----ERSVEGLRSKLERWQA 307

Query: 65  ELPPVIDRGEFSSYPXXXXXXXXXXXXXXXXXXXX--------------------XXXXX 104
            LP V+D G  SSY                                              
Sbjct: 308 NLPVVLDVG--SSYQPSSDYKTNSNFNPKSSYKPNEIVPRNPQMIGAPIQKPSGRNKKSG 365

Query: 105 XXXLFSCFSTICGVECSIVCGG 126
              LFSCF  ICG+ECSIVCGG
Sbjct: 366 DNGLFSCFGNICGIECSIVCGG 387