Miyakogusa Predicted Gene

Lj0g3v0280899.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280899.2 Non Chatacterized Hit- tr|C0PLD4|C0PLD4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,37.86,1e-18,coiled-coil,NULL,CUFF.18674.2
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10417.1 | Symbols:  | Encodes protein with unknown function ...   164   5e-41

>AT1G10417.1 | Symbols:  | Encodes protein with unknown function
           whose expression is repressed by inoculation with
           Agrobacterium tumerifaciens. | chr1:3424616-3427457
           REVERSE LENGTH=431
          Length = 431

 Score =  164 bits (414), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/180 (49%), Positives = 126/180 (70%)

Query: 1   MKRTIESKDRMLGVLSEKINSHLLLFDSIAKEVFYIKQTVDKVQNTVNDKEEVVISLKNK 60
           MK +IE++DR + +L EKI SHL LFDSI KE   IK+ + +VQ  V+ KE+VV  LK K
Sbjct: 157 MKCSIEARDRKILMLHEKITSHLTLFDSIEKEASVIKKVIHEVQGLVDKKEDVVTGLKEK 216

Query: 61  MDRVSAFENEFIGHISDQRNRLENNEAALRRKDRVISELEAKLDREKLSNNSQSQIEDLQ 120
           MD VS +E  FI +I     +L+ +E  L+ KD +ISEL A+L+ EK  N  Q Q+E+LQ
Sbjct: 217 MDHVSTYEKVFIENIRALEEKLKCHETELQSKDNIISELSAQLESEKSKNEHQHQVEELQ 276

Query: 121 KTLSAKDAEIHNLISDKEALHYEVGSLRLILQRIRDTVTNMNEEDKRLFSSILQHKEASE 180
           KTL  KD  + NLIS+KEAL+ E+  L +ILQRI+++V+ M EED+++F+SIL  ++ S+
Sbjct: 277 KTLQVKDLAVENLISEKEALYSEMKGLEMILQRIQESVSLMTEEDRKVFTSILTFEQGSD 336