Miyakogusa Predicted Gene
- Lj0g3v0280569.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0280569.2 Non Chatacterized Hit- tr|C5WUG2|C5WUG2_SORBI
Putative uncharacterized protein Sb01g030700
OS=Sorghu,50.54,5e-19,DUF3464,Protein of unknown function DUF3464;
seg,NULL,CUFF.18732.2
(182 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G52780.1 | Symbols: | Protein of unknown function (DUF3464) ... 99 1e-21
AT4G19100.1 | Symbols: PAM68 | Protein of unknown function (DUF3... 62 2e-10
>AT5G52780.1 | Symbols: | Protein of unknown function (DUF3464) |
chr5:21390943-21391449 REVERSE LENGTH=168
Length = 168
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 1 MKSLVCASHPTLYLPNYSSWKPKFRAFHPITAEKQPNYYPLTTPK---PPRANAKGFSNR 57
M++L+C SH L L + S K ++ +P T YP P+ A KGF +
Sbjct: 1 MRALLC-SHRLLPLSSLSRTTVKTKSHNPKT------LYPNNKPRWESKLHAGPKGFQSS 53
Query: 58 PSTTETDIVPSKNRRRGVNEEEDEELPRVVLYRIIGRILFSXXXXXXXXXXXXXXXXXXK 117
++ + +E V R++GRI+ S K
Sbjct: 54 RTSEKPGRPDPDPEDDPPIPQE-------VFERMMGRIVVSVGTPLGLGVAILKVLEVLK 106
Query: 118 DRGIWDAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
DR +WD PLW+P+ TTL+TFG+S LGIAYG+LS +LD + + GL E + NWVEMW+E
Sbjct: 107 DRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKE 166
Query: 178 ED 179
+
Sbjct: 167 DQ 168
>AT4G19100.1 | Symbols: PAM68 | Protein of unknown function
(DUF3464) | chr4:10453453-10454359 FORWARD LENGTH=214
Length = 214
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 71 RRRGVNEEEDEELPRVVLYRIIGRILFSXXXXXXXXXXXXXXXXXXKDRGIWDAPLWIPF 130
R RGV +P +V R+I R+ F+ K D P W+PF
Sbjct: 107 RERGV-------IPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPF 159
Query: 131 TTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
+ + FG + G++YG +S+S D REG+ LG NE ++NW W+
Sbjct: 160 IVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQS 206