Miyakogusa Predicted Gene

Lj0g3v0279749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0279749.1 tr|C4P7K9|C4P7K9_9ROSI Ornithine aminotransferase
(Fragment) OS=Populus maximowiczii x Populus
nigra,77.97,3e-19,ORNITHINE AMINOTRANSFERASE,Ornithine
aminotransferase; AMINOTRANSFERASE CLASS III,Aminotransferase
c,NODE_49203_length_182_cov_550.598877.path1.1
         (60 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46180.1 | Symbols: DELTA-OAT | ornithine-delta-aminotransfer...    94   2e-20

>AT5G46180.1 | Symbols: DELTA-OAT | ornithine-delta-aminotransferase
           | chr5:18718766-18721271 REVERSE LENGTH=475
          Length = 475

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/60 (75%), Positives = 53/60 (88%)

Query: 1   MLCIKPGQHGSTFGGNPLASAVAIASLDVIKEERLVERSAQMGEELLNQLRKIQQKFPDH 60
           ML IKPGQHGSTFGGNPLASAVA+ASLDVI EE+LVERSA +GEEL  QL +I+++FP +
Sbjct: 313 MLHIKPGQHGSTFGGNPLASAVAMASLDVIVEEKLVERSASLGEELRIQLNEIKKQFPKY 372