Miyakogusa Predicted Gene
- Lj0g3v0279589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0279589.1 Non Chatacterized Hit- tr|I1NFU9|I1NFU9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.34,0,UBIQUITIN_2,Ubiquitin supergroup; SURP,SWAP/Surp; no
description,NULL; seg,NULL; SPLICEOSOME ASSOCIA,CUFF.18702.1
(810 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14650.2 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 685 0.0
AT1G14650.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 685 0.0
AT1G14640.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 593 e-169
AT5G12280.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 130 4e-30
AT4G16200.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 127 2e-29
AT5G06520.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 123 4e-28
AT5G06890.1 | Symbols: | Ubiquitin-like superfamily protein | c... 75 3e-13
AT3G49130.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 70 9e-12
AT1G18050.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 67 7e-11
AT2G43960.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 65 3e-10
AT3G27600.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 61 3e-09
AT5G55100.2 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 51 4e-06
AT5G55100.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/sur... 51 4e-06
>AT1G14650.2 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein |
chr1:5028077-5030520 FORWARD LENGTH=785
Length = 785
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/527 (68%), Positives = 414/527 (78%), Gaps = 17/527 (3%)
Query: 16 DGNLGPLPESQV----IEERPSDEEQXXXXXX--XXXXXXXXXIGIIHPPPDIRTIVDKT 69
DG LGPLP SQ+ +EER EQ IGIIHPPPDIRTIV+KT
Sbjct: 16 DGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPPDIRTIVEKT 75
Query: 70 SQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQNQSSTQQPGDLA 129
+QFV+KNG EFEKRI+ +N NAKFNFL SSDPYHA+YQH+L E+RAQN+ Q D
Sbjct: 76 AQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKDGAQGTDDSD 135
Query: 130 GDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQYTVRLPEGITGE 189
G +D T +A D + EA +PD+ AQFR K L+ PE E+YTVRLPEGITGE
Sbjct: 136 GTTDPQLDTGAA---DES---EAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPEGITGE 189
Query: 190 ELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAYSKVLMPP 249
ELDIIKLTAQFVARNGKSFLTGL++RE NN FHF+KPTH+MFTFFTSL DAYS+VLMPP
Sbjct: 190 ELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSEVLMPP 249
Query: 250 KGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVV 309
K L EKLRKS D+TTVLERC++RLEW+RSQEQ ++K EDE E ER+QMAMIDWHDFVVV
Sbjct: 250 KDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWHDFVVV 309
Query: 310 ETIDFADDEDEELPTPMTLEEVIRRTKVSSAMEEDIVEPGKXXXXXXXXXXAQLVAEGMR 369
E+IDFAD+EDEELP PMTL+EVIRR+K S+ E++IVEPGK +LVAEGMR
Sbjct: 310 ESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLVAEGMR 369
Query: 370 AASLEDKDDGKKNEMRVTEDPEPPMRIVRNWKRPEDRVPAERDPTKFVVSPITGELIPIS 429
AA+LE+ ++ D E PMRIV+NWKRPEDR+P ERDPTK V+SPITGELIPI+
Sbjct: 370 AANLEE-----NVKIENVHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGELIPIN 424
Query: 430 EMSEHIRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVS 489
EMSEH+RISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDIFGTTEEEVS
Sbjct: 425 EMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVS 484
Query: 490 NAVKAEIEKKNDEQPKQVIWDGHTGSIGRTANQAMSQSIGSEDQNDA 536
NAVKAEIEKK DEQPKQVIWDGHTGSIGRTANQA+SQ+ E+Q D
Sbjct: 485 NAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDG 531
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 700 KRQKLDDSSLIPEDQFLAQHPGPVRISISVPNVDEGNLKGQVLEITVQSLSETVASLKEK 759
KRQK D+S+L+PEDQFLAQHPGP I +S PN ++G Q +EITVQSLSE V SLKEK
Sbjct: 680 KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEK 735
Query: 760 IAGDIQLPANKQKLSGKPGFLKDNLSLAHYNVSGGETLTLSLRERGGRKR 809
IAG+IQ+PANKQKLSGK GFLKDN+SLAHYNV GE LTLSLRERGGRKR
Sbjct: 736 IAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
>AT1G14650.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein |
chr1:5028077-5030520 FORWARD LENGTH=785
Length = 785
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/527 (68%), Positives = 414/527 (78%), Gaps = 17/527 (3%)
Query: 16 DGNLGPLPESQV----IEERPSDEEQXXXXXX--XXXXXXXXXIGIIHPPPDIRTIVDKT 69
DG LGPLP SQ+ +EER EQ IGIIHPPPDIRTIV+KT
Sbjct: 16 DGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPPDIRTIVEKT 75
Query: 70 SQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQNQSSTQQPGDLA 129
+QFV+KNG EFEKRI+ +N NAKFNFL SSDPYHA+YQH+L E+RAQN+ Q D
Sbjct: 76 AQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKDGAQGTDDSD 135
Query: 130 GDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQYTVRLPEGITGE 189
G +D T +A D + EA +PD+ AQFR K L+ PE E+YTVRLPEGITGE
Sbjct: 136 GTTDPQLDTGAA---DES---EAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPEGITGE 189
Query: 190 ELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAYSKVLMPP 249
ELDIIKLTAQFVARNGKSFLTGL++RE NN FHF+KPTH+MFTFFTSL DAYS+VLMPP
Sbjct: 190 ELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSEVLMPP 249
Query: 250 KGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVV 309
K L EKLRKS D+TTVLERC++RLEW+RSQEQ ++K EDE E ER+QMAMIDWHDFVVV
Sbjct: 250 KDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWHDFVVV 309
Query: 310 ETIDFADDEDEELPTPMTLEEVIRRTKVSSAMEEDIVEPGKXXXXXXXXXXAQLVAEGMR 369
E+IDFAD+EDEELP PMTL+EVIRR+K S+ E++IVEPGK +LVAEGMR
Sbjct: 310 ESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLVAEGMR 369
Query: 370 AASLEDKDDGKKNEMRVTEDPEPPMRIVRNWKRPEDRVPAERDPTKFVVSPITGELIPIS 429
AA+LE+ ++ D E PMRIV+NWKRPEDR+P ERDPTK V+SPITGELIPI+
Sbjct: 370 AANLEE-----NVKIENVHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGELIPIN 424
Query: 430 EMSEHIRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVS 489
EMSEH+RISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDIFGTTEEEVS
Sbjct: 425 EMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVS 484
Query: 490 NAVKAEIEKKNDEQPKQVIWDGHTGSIGRTANQAMSQSIGSEDQNDA 536
NAVKAEIEKK DEQPKQVIWDGHTGSIGRTANQA+SQ+ E+Q D
Sbjct: 485 NAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDG 531
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 700 KRQKLDDSSLIPEDQFLAQHPGPVRISISVPNVDEGNLKGQVLEITVQSLSETVASLKEK 759
KRQK D+S+L+PEDQFLAQHPGP I +S PN ++G Q +EITVQSLSE V SLKEK
Sbjct: 680 KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEK 735
Query: 760 IAGDIQLPANKQKLSGKPGFLKDNLSLAHYNVSGGETLTLSLRERGGRKR 809
IAG+IQ+PANKQKLSGK GFLKDN+SLAHYNV GE LTLSLRERGGRKR
Sbjct: 736 IAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
>AT1G14640.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr1:5023656-5025955 FORWARD
LENGTH=735
Length = 735
Score = 593 bits (1528), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/521 (60%), Positives = 382/521 (73%), Gaps = 26/521 (4%)
Query: 16 DGNLGPLPESQVIEERPSD-----EEQXXXXXXXXXXXXXXXIGIIHPPPDIRTIVDKTS 70
DGNLGPLP SQ+ +E + E+ IGII+PPP+IR IV+ T+
Sbjct: 16 DGNLGPLPPSQLTDEEIKENEFQGEQNNSIQTPIAVATHTNPIGIIYPPPEIRKIVETTA 75
Query: 71 QFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQNQSSTQQPGDLAG 130
QFV++NG F ++ A NA F+FL S +PYH +Y++++ E+ + Q G
Sbjct: 76 QFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEYSCHIRDGAQ--GTDVD 133
Query: 131 DSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQYTVRLPEGITGEE 190
D++ P+ + + + KPD+ AQFR RK+L+ PE E+YTVRLPEGI E
Sbjct: 134 DTEDPK------------LDDESDAKPDLQAQFRAPRKILEAPEPEKYTVRLPEGIMEAE 181
Query: 191 LDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAYSKVLMPPK 250
LDIIK TAQFVARNG+SFL L REVNN F F+KPTH+MFTFFTSL DAYS+VLMPP+
Sbjct: 182 LDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVDAYSEVLMPPR 241
Query: 251 GLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVE 310
L EKLRKSV D+TTVLERC+NRLEW+R QE+ + K EDE E+ER+QM MIDW DF VVE
Sbjct: 242 DLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVMIDWKDFAVVE 301
Query: 311 TIDFADDEDEELPTPMTLEEVIRRTKVSSAMEEDIVEPGKXXXXXXXXXXAQLVAEGMRA 370
+IDFAD+ED++LP PMTLEEVIRR+KVS+ E++IVEPGK +LVAEGMRA
Sbjct: 302 SIDFADEEDKDLPMPMTLEEVIRRSKVSAMEEDEIVEPGKEVEMDMDEEEVKLVAEGMRA 361
Query: 371 ASLEDKDDGKKNEMRVTEDPEPPMRIVRNWKRPEDRVPAERDPTKFVVSPITGELIPISE 430
A+LE+ V + E PMRIV+NWKRPEDR ERD +K V+S ITGELIPI+E
Sbjct: 362 ANLEEYVGS------VEIEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRITGELIPITE 415
Query: 431 MSEHIRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSN 490
MSEH+RISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDIFGTTEEEVSN
Sbjct: 416 MSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSN 475
Query: 491 AVKAEIEKKNDEQPKQVIWDGHTGSIGRTANQAMSQSIGSE 531
AVKA+IEKK DEQPKQVIWDGHTGSIGRTANQA++Q+ E
Sbjct: 476 AVKADIEKK-DEQPKQVIWDGHTGSIGRTANQALTQNSNGE 515
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 4/73 (5%)
Query: 700 KRQKLDDSSLIPEDQFLAQHPGPVRISISVPNVDEGNLKGQVLEITVQSLSETVASLKEK 759
KRQKLD+S+L+PEDQFLAQHPGP I +S PN ++ GQV+EITVQSLSE V SLKEK
Sbjct: 667 KRQKLDESALVPEDQFLAQHPGPATIRVSKPNEND----GQVMEITVQSLSENVGSLKEK 722
Query: 760 IAGDIQLPANKQK 772
IAG++Q+PANKQK
Sbjct: 723 IAGEMQIPANKQK 735
>AT5G12280.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein |
chr5:3972014-3973636 REVERSE LENGTH=419
Length = 419
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 77/98 (78%), Gaps = 4/98 (4%)
Query: 703 KLDDSSLIPEDQFLAQHPGPVRISISVPNVDEGNLKGQVLEITVQSLSETVASLKEKIAG 762
+ D+S L+PEDQFLAQHPG I +SVP+ D+ +V++ITVQSLSE VASLKEKI+G
Sbjct: 324 EFDESVLVPEDQFLAQHPGSSTIMVSVPDPDDW----KVVKITVQSLSENVASLKEKISG 379
Query: 763 DIQLPANKQKLSGKPGFLKDNLSLAHYNVSGGETLTLS 800
+IQ P NKQKL GK GFLKDN SLAHYNV GE LTLS
Sbjct: 380 EIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEILTLS 417
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 109/267 (40%), Gaps = 62/267 (23%)
Query: 58 PPPDIRTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQ 117
PP ++R +DK ++ VA+ G E++I+ ++E+ A+
Sbjct: 89 PPREMRIHMDKIARVVARKGLRIERKIM------------------------NVSEYLAK 124
Query: 118 NQSSTQQPGDLAGDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQ 177
NQ Q P AP A K D RP P+
Sbjct: 125 NQDEGAQ-------------EPEAP----------ATLKGDAQHYRRPFLLSDPAPKFPD 161
Query: 178 YTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNLP-FHFLKPTHNMFTFFT 236
Y LPEG T E++D I LTAQ V R G+ F L +EV+N P F FLKP + F +F
Sbjct: 162 YV--LPEGYTIEDVDTIFLTAQIVGRYGEEFWLDLI-KEVDNKPQFEFLKPADSKFDYFN 218
Query: 237 SLADAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERI 296
L+ S+ L +EKL S M V + L R Q + R+ E +
Sbjct: 219 RLSVVASEGL----KRSEKLTSS--RMAIVSKAFFYHL---RRQNEKRELTHKEGAAKAC 269
Query: 297 QMAMIDWHDFVVVETIDFADDEDEELP 323
+ + FV + FAD +DE+LP
Sbjct: 270 TL-FGALYAFVGPDGC-FADIKDEDLP 294
>AT4G16200.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr4:9175649-9176565 FORWARD
LENGTH=288
Length = 288
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 120/254 (47%), Gaps = 51/254 (20%)
Query: 55 IIHPPPDI--RTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSS-DPYHAYYQHRL 111
II PP DI RT+VDK +QFV+K G EFE +I+ + +AKFNFL S+ DP H YY+H+L
Sbjct: 14 IITPPADIGTRTLVDKAAQFVSKKGLEFETKIIDSYPTDAKFNFLRSTADPCHTYYKHKL 73
Query: 112 AEFRAQNQSSTQQPGDLAGDSDVPESTPSAPAPDSNGVVEAAGEKPDI--------SAQF 163
AE+ +QNQ D+ P T +A ++ +V G + ++ A+F
Sbjct: 74 AEYSSQNQDGATDESDIKIFHAPPNVTTTAIVETTSCLVSQFGSEFEMMVKDSNTDDARF 133
Query: 164 RPVRKVLDP---------------PEAEQYTVRLPEGI---------------------- 186
++ DP P Y +L E I
Sbjct: 134 NFLKSSEDPYNVLYKQKLDEYSLDPRDAYYQHKLAESISKYHREATPKLVLPNLLQFRLV 193
Query: 187 ---TGEELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAYS 243
T EELD +K+TAQFVA G F L R + F F+K T F+F+ AYS
Sbjct: 194 KEMTFEELDTVKVTAQFVAWYGDDFRGFLMERVMTEPQFEFMKATDYRFSFYNEFVVAYS 253
Query: 244 KVLMPPKGLTEKLR 257
+VL PPK L +KLR
Sbjct: 254 QVLNPPKYLKDKLR 267
>AT5G06520.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr5:1987250-1989372 REVERSE
LENGTH=679
Length = 679
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 135/266 (50%), Gaps = 63/266 (23%)
Query: 53 IGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLA 112
+ I PPP+IR+ V+ T+ V+KNG E E++++ + +A+ F+ S+DPYHA+YQ +LA
Sbjct: 392 VAPIEPPPEIRSCVENTALIVSKNGLEIERKMMELSMNDARHRFVWSTDPYHAFYQLKLA 451
Query: 113 EFRAQNQSSTQQPGDLAGDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDP 172
E+RAQNQ D A D +P++ F
Sbjct: 452 EYRAQNQ-------DRAHDI-----------------------QPNVLRSF--------- 472
Query: 173 PEAEQYTVRLPEG-ITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHN- 230
+ PE IT +EL IIKLTAQF+AR G +F+ GL R V N F FL+ T+N
Sbjct: 473 ----GFGFEFPEKEITLKELGIIKLTAQFMARYGMNFVQGLRKRVVGNPQFKFLESTNNS 528
Query: 231 MFTFFTSLADAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDE 290
F+F+ L AYS+VLMP K L+ KS TV++ ++ L+ E+
Sbjct: 529 RFSFYNGLVIAYSRVLMPSKMLS----KSDDCTATVVDGFLSCLQLEK------------ 572
Query: 291 IEQERIQMAMIDWHD-FVVVETIDFA 315
+E + + MID D F +E D++
Sbjct: 573 -REEGVDIDMIDLLDCFARLEDADYS 597
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 21/127 (16%)
Query: 182 LPEGITG--EELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLA 239
LP GIT +EL++IKLTAQFVA GK F LT+R V + F FLKPT + +F+T +
Sbjct: 79 LPLGITFTRKELELIKLTAQFVAVYGKYFQRELTTRVVESPLFEFLKPTDSRNSFYTRII 138
Query: 240 DAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMA 299
Y VLMP + L K + V D + + Q K ED++E MA
Sbjct: 139 LGYQGVLMPSQKL--KTKSEVFD------------GFSKLIAQVPVKDEDDVE-----MA 179
Query: 300 MIDWHDF 306
M D H +
Sbjct: 180 MTDLHAY 186
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 22/251 (8%)
Query: 65 IVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQNQSSTQQ 124
++ T+QFVA G F++ + + F FL +D +++Y + ++ S +
Sbjct: 92 LIKLTAQFVAVYGKYFQRELTTRVVESPLFEFLKPTDSRNSFYTRIILGYQGVLMPSQKL 151
Query: 125 PGDLAGDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQYTVRLPE 184
+ P D + V A + L P ++ L
Sbjct: 152 KTKSEVFDGFSKLIAQVPVKDEDDVEMAMTDLHAYEYFANMSINDLRAPAPVKFAF-LTR 210
Query: 185 GITG--EELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAY 242
G+T ELD IKLTAQFVA G F T L R + F F K T + +F+ L D Y
Sbjct: 211 GVTFTRNELDTIKLTAQFVAVYGTLFRTELMKRVFISPKFDFFKSTDSKCSFYLRLVDGY 270
Query: 243 SKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMID 302
S+VL + L + V+ +L++ V + ++ ++MA+ D
Sbjct: 271 SRVLRRSRKNGAGLGEVVVGFLKLLDQVVEK-------------------KDAVEMALTD 311
Query: 303 WHDFVVVETID 313
H +D
Sbjct: 312 LHALEFFANVD 322
>AT5G06890.1 | Symbols: | Ubiquitin-like superfamily protein |
chr5:2135743-2135943 FORWARD LENGTH=66
Length = 66
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 12/75 (16%)
Query: 727 ISVPNVDEGNLKGQVLEITVQSLSETVASLKEKIAGDIQLPANKQKLSGKPGFLK-DNLS 785
+SVP+V++G QV+EITVQSLSE VASLKEK+ ANK KL GK G LK D+ S
Sbjct: 2 VSVPDVNDG----QVIEITVQSLSENVASLKEKV-------ANKLKLRGKAGILKDDDKS 50
Query: 786 LAHYNVSGGETLTLS 800
LAHYNV G+ LTLS
Sbjct: 51 LAHYNVRAGDILTLS 65
>AT3G49130.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein |
chr3:18210453-18211708 FORWARD LENGTH=307
Length = 307
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 169 VLDPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPT 228
VL P Q T+ +GIT +EL ++KLTAQ R G F GL R N F FL P+
Sbjct: 39 VLQLPLGSQLTIP-AKGITLKELGVMKLTAQSSVRYGFDFWCGLWKRVYMNPLFQFLNPS 97
Query: 229 HNMFTFFTSLADAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQKAE 288
+ F+ AYS+VL P K KL+K TVLE +RL + +E
Sbjct: 98 DSRSDFYNGFTAAYSRVLKPSK----KLKKFDACTATVLEGFFHRLHLFKLEEG------ 147
Query: 289 DEIEQERIQMAMIDWHDFV 307
++ AMID H FV
Sbjct: 148 -------VETAMIDLHGFV 159
>AT1G18050.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein |
chr1:6209771-6211588 REVERSE LENGTH=285
Length = 285
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 59 PPDIRTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQN 118
PP R D +++ V GPE E++++ + AGN K++F SSD YHAYYQ +LA ++
Sbjct: 147 PPRTRYYADSSARLVFMEGPEMERKMMTSYAGNPKYSFFWSSDRYHAYYQKKLAGYQLHE 206
Query: 119 QSSTQQPGDLAGDSDVP-----ESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPP 173
+ G DVP P G A+ +KP + P RK
Sbjct: 207 GPEIKLSD--YGIPDVPLRVRVREPPLQIPKPPPGF--ASDQKPTMKYPPPPPRK----- 257
Query: 174 EAEQYTVRLPEGITGEELDIIK 195
Y LPE ITG+EL+ IK
Sbjct: 258 ----YAAILPEWITGKELETIK 275
>AT2G43960.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr2:18203459-18204907
REVERSE LENGTH=442
Length = 442
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 58 PPP-----DIRTI-VDKTSQFVAKNGPEFEKRIVANNAG----NAKFNFLHSSDPYHAYY 107
PPP ++R+I +++ S A+ G E E+++ + G + F F D H Y
Sbjct: 9 PPPRPDDDELRSIMLERLSIAAARGGLEMEEKLKSRFVGLDIPSCSFVFPKGRD--HHIY 66
Query: 108 QHRLAEFRAQNQSSTQQPGDLAGDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVR 167
+ ++AE+ + P G+V+ ++ P+
Sbjct: 67 KQKIAEYTKSPPLHSP-------------------PPLPPGLVDQC------CLKYNPLE 101
Query: 168 KVLDPPEAEQYTVRLPEG-ITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLK 226
+V E +TVR+PEG +T +EL IIK TAQFV R G+ F L R + F FL
Sbjct: 102 QVAIIDELSAFTVRVPEGGMTRKELGIIKFTAQFVLRYGQYFRLALRDRVSTDTEFKFLD 161
Query: 227 PTHNMFTFFTSLADAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQK 286
+ FF+ L YS +L ++ M +++ ++ L + + + ++
Sbjct: 162 KGDSRAHFFSLLFLGYSHLL-------RAWEYPLVGMDVLVDGFLSALNSFKEKLEGDEE 214
Query: 287 AEDEIEQERIQMAMIDWHDFVVVETIDFADDEDEEL 322
D+I+ +R HDFVV + FAD E++ L
Sbjct: 215 LVDKIKTDR--------HDFVVCDEY-FADLENKAL 241
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 172 PPEAEQYTVRLPEG-ITGEELDIIKLTAQFVARNGKSFLTGLTSR-EVNNLPFHFLK--P 227
PP + V +P+G + +EL ++K TA FV R G F L R F FLK P
Sbjct: 267 PPVLVLFRVGIPQGGMMRKELGLMKFTAMFVVRYGNDFWDALWDRVSSTETEFQFLKRNP 326
Query: 228 THNM-FTFFTSLADAYSKVLMPPKGLTEKLRKSVLDMTTVLERCVNRLEWERSQEQARQK 286
++ F+ L A+ V+ P GL + M VLE + ++K
Sbjct: 327 GNDRGMLLFSQLLLAFGNVVQP-WGLCPRESNPPARMEAVLEGFFT------AFSAFKKK 379
Query: 287 AEDEIEQERIQMAMIDWHDFVVVETIDFADDEDEELPTP 325
EDE E E + + D DFVV ET + D +E P P
Sbjct: 380 QEDE-EDEVVNKLVTDRRDFVVSETFQYFLDIEESTPLP 417
>AT3G27600.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein |
chr3:10223743-10224948 REVERSE LENGTH=313
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 70 SQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLAEFRAQNQSSTQQPGDLA 129
+ +++ G EK + G+A++NF+ SDP+H +YQ RL ++R+ NQ Q +L
Sbjct: 2 ASYISTGGLVVEKVMRYLVVGDARYNFMGISDPFHPFYQQRLTQYRSLNQ---QDEANL- 57
Query: 130 GDSDVPESTPSAPAPDSNGVVEAAGEKPDISAQFRPVRKVLDPPEAEQYTVRLPEGITGE 189
D D + A + ++ G D R VL P Y RLP+G++ +
Sbjct: 58 -DYDATLAAYMRKATEFRSRIQQEGPNLDDDDADAGQRIVL--PHLLDY--RLPKGMSVK 112
Query: 190 ELDIIKLTAQFVARNGKSFLTGLTSREVNNLPFHFLKPTHNMFTFFTSLADAYSKVLMPP 249
L++ + + S G R+ F F PT + F FT YS+V P
Sbjct: 113 NLEL--------SSSQHSLGLGFKERD----GFEFTNPTDSKFPRFTLFVLEYSEVFKAP 160
Query: 250 KGLTEK 255
K L EK
Sbjct: 161 KDLKEK 166
>AT5G55100.2 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr5:22361401-22364664
REVERSE LENGTH=844
Length = 844
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 53 IGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLA 112
+ I+ P +++ ++DK F+ KNG E E +VA + F FL S YHAYY+ L
Sbjct: 326 LQIVEPTTEMKRVIDKIVDFIQKNGKELEATLVAQDVKYGMFPFLRPSSLYHAYYRKVLQ 385
Query: 113 E 113
E
Sbjct: 386 E 386
>AT5G55100.1 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein | chr5:22361281-22364664
REVERSE LENGTH=843
Length = 843
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 53 IGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIVANNAGNAKFNFLHSSDPYHAYYQHRLA 112
+ I+ P +++ ++DK F+ KNG E E +VA + F FL S YHAYY+ L
Sbjct: 326 LQIVEPTTEMKRVIDKIVDFIQKNGKELEATLVAQDVKYGMFPFLRPSSLYHAYYRKVLQ 385
Query: 113 E 113
E
Sbjct: 386 E 386