Miyakogusa Predicted Gene
- Lj0g3v0279579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0279579.1 Non Chatacterized Hit- tr|I1LFV3|I1LFV3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20053
PE,23.77,6e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.18599.1
(507 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 593 e-170
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 7e-59
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 8e-53
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 182 4e-46
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 9e-46
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 173 2e-43
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 169 6e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 167 1e-41
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 4e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 9e-41
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 6e-40
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 1e-39
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 5e-39
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 158 9e-39
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 9e-38
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 1e-37
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 8e-37
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-36
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 150 2e-36
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 145 5e-35
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 3e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 5e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 9e-34
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 138 9e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 8e-32
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 9e-32
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 134 1e-31
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 132 6e-31
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 2e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 130 2e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 130 2e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 127 1e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 126 3e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 124 1e-28
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 122 7e-28
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 8e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 9e-27
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 114 1e-25
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 109 4e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 85 1e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 83 4e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 80 2e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 80 3e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 74 3e-13
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 73 4e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 72 8e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 68 1e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 67 3e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 66 5e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 65 1e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 3e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 4e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 7e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 58 1e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 57 2e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 3e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 3e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 3e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 3e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 55 9e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 9e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 55 1e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 55 1e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 55 1e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 2e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 49 6e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 49 7e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 49 9e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 593 bits (1530), Expect = e-170, Method: Compositional matrix adjust.
Identities = 270/449 (60%), Positives = 360/449 (80%), Gaps = 4/449 (0%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A++ICKIL+K +S ++ L + SV++SP L+ EVL KLSNAGVLALS F WAE QKGFK
Sbjct: 66 AERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFK 125
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
H+T +++ALIE+LGKI+QFK+IW+LV+DMK +KLL+++T KVKEA+ F
Sbjct: 126 HTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAF 185
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
KME++G K E SDFN+++D L KS++V AQ++FDKM+ + PD+KSYTILLEGW Q+
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
NLLRV+EV REMK E FEPDVV YGI+INA+CKAKKY+EA+ F++EM+++N PSPHIF
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+LINGLGS+K+L++ALEF+E+ K++GF E PTYNA+VGAYCWS RM+DAY+ VDEM+
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
GVGPN+RTYDIILHHLI+ + ++EAY V++ MS CEPTVSTY+I++R+FC++ERLD
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLD 421
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
M + +WD+M+ +G+LPGMH+F LI+ALCH NKLD AC+YF +MLDVGIRPP ++FS LK
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 481
Query: 479 QALIDAGMETTAIHFALKIDKLRKTPLVA 507
Q L+D G + +K+D+LRKT LV
Sbjct: 482 QTLLDEGRKDKVTDLVVKMDRLRKTQLVG 510
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 270/447 (60%), Gaps = 3/447 (0%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A I K+L SP +D+AL + VS E+V +VLN+ NAG+L FF W+EKQ+ ++
Sbjct: 72 AKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE 131
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
HS ++H +IE+ KIRQ+K++W+L+ M+++K+L +T KV EA+ F
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
MEKY L P + FN L+ LCKSK+V KAQE+F+ MR R PD K+Y+ILLEGW ++
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
NL + EV REM PD+VTY I+++ CKA + DEA+G M P+ I+
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
S L++ G++ RL+EA++ + + + +G + +N+++GA+C + RM + YRV+ EMK
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
GV PNS++ +IIL HLI+ EA+ VFR+M CEP TY +++++FC+++ ++
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEME 428
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
VW MR +G+ P MH F VLI+ LC AC ++M+++GIRP F L+
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLR 488
Query: 479 QALIDAGMETTAIHFALKIDKLRKTPL 505
Q LI E K++ L PL
Sbjct: 489 QLLIKEEREDVLKFLNEKMNVLVNEPL 515
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 238/432 (55%), Gaps = 14/432 (3%)
Query: 58 HADKICKIL----SKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEK 113
+KI +IL S+ P ++ AL + +++ P L+ VL++ +AG L FF WA K
Sbjct: 66 EVEKIYRILRNHHSRVPK--LELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATK 123
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKV 171
Q G+ HS E +++ L K+RQF +W L+E+M++ +L+ + V
Sbjct: 124 QPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMV 183
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+AVE ++M KYGL+P+ F L+D LCK+ SV++A ++F+ MR + P+L+ +T L
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSL 242
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L GW ++ L+ EV +MK EPD+V + L++ Y A K +A ++M+++
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 292 MPSPHIFSTLINGL-GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC-WSMRMDDA 349
P+ + ++ LI L ++KR+DEA+ + + + G + TY A++ +C W M +D
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-IDKG 361
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
Y V+D+M++ GV P+ TY I+ K +E + +M GC P + Y++++R
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-GCHPDLLIYNVVIR 420
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
L C + + +W++M A G+ PG+ F ++I+ L AC +F++M+ GI
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-F 479
Query: 470 PANLFSTLKQAL 481
A + TLK L
Sbjct: 480 SAPQYGTLKSLL 491
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 15/307 (4%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDT--XXXXXXXXXXXXK 170
K+ G + F L+ + ++L+ DM++R +
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+ F +ME+YG + ++ + L+ CK ++K + D MR +G++P +Y
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ +++ E+ +MK PD++ Y ++I CK + EAV ++EM+
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF--APETPTYNAVVGAYCWSMRMDD 348
+ P F +ING S L EA +++ + G AP+ T +++ ++ DD
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLN----NLVRDD 498
Query: 349 AYRVVDEMKQC------GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ ++ C N + I +H L +EA S M EM P +
Sbjct: 499 KLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDM-MEMDLMPQPN 557
Query: 403 TYDIILR 409
TY +++
Sbjct: 558 TYAKLMK 564
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 235/414 (56%), Gaps = 6/414 (1%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 132 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 191
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H + ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 192 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 251
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 310
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M + +PD+V + +++ +++K +A+ +H M+ K P+
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILRLFCDEER 416
+ G P+ +TY+ ++ + + + A ++ +M +E+ EP++ T+++I++ +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI--EPSIHTFNMIMKSYFMARN 488
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+M AVW++M +GI P + + VLI L K AC+Y ++MLD G++ P
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 218 HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYD 277
+G D ++Y ++ ++ + + V EM + + T+ I + A+ AK+
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+AVG + M++ + L++ LG K EA ++K K F P TY ++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC 397
+C + +A R+ ++M G+ P+ ++++L L+++R +A +F
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-------- 357
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
M+++G P + + ++I C + ++ A +
Sbjct: 358 ----------------------------VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 458 YFQQMLDVGIRPPANLFSTL 477
YF M+D G++P A +++ L
Sbjct: 390 YFDDMVDSGLQPDAAVYTCL 409
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y L++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K + P
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ ++ LI GL + + EA + E+ G YN +
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 233/414 (56%), Gaps = 6/414 (1%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 132 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 191
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H++ ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 192 AHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 251
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 310
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M +PD+V + +++ ++ K +A+ +H M+ K P+
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILRLFCDEER 416
+ G P+ +TY+ ++ + + + ++ +M +E+ EP++ T+++I++ +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI--EPSIHTFNMIMKSYFVARN 488
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+M AVWD+M +GI P + + VLI L K AC+Y ++MLD G++ P
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
T+ I + A+ AK+ +AVG + M++ + L++ LG K EA ++K
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
K F P TY ++ +C + +A R+ ++M G+ P+ ++++L L+++
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
+A +F M S+ C P V +Y I++R FC + ++ + +D M G+ P V+
Sbjct: 350 SDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
LI+ KLD + ++M + G P ++ L + + + M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y L++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K + P
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ ++ LI GL S+ + EA + E+ G YN +
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 232/414 (56%), Gaps = 6/414 (1%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 131 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 190
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H + ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 191 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 250
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 251 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 309
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M +PD+V + +++ ++ K +A+ +H M+ K P+
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILRLFCDEER 416
+ G P+ +TY+ ++ + + + ++ +M +E+ EP++ T+++I++ +
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI--EPSIHTFNMIMKSYFVARN 487
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+M AVWD+M +GI P + + VLI L K AC+Y ++MLD G++ P
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 218 HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYD 277
+G D ++Y ++ ++ + + V EM + + T+ I + A+ AK+
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 245
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+AVG + M++ + L++ LG K EA ++K K F P TY ++
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC 397
+C + +A R+ ++M G+ P+ ++++L L+++ +A +F M S+ C
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
P V +Y I++R FC + ++ + +D M G+ P V+ LI+ KLD +
Sbjct: 365 -PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 458 YFQQMLDVGIRPPANLFSTLKQALIDAGM 486
++M + G P ++ L + + + M
Sbjct: 424 LLKEMQEKGHPPDGKTYNALIKLMANQKM 452
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y L++
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K + P
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ ++ LI GL S+ + EA + E+ G YN +
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 552
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 224/465 (48%), Gaps = 10/465 (2%)
Query: 44 SGSLRIHTLIPHTPHA----DKICKILS--KSPNSTIDAALADLSVEVSPELVAEVLNKL 97
S S RI + + H P + ++I ++LS ++P ++ L S VS LV +VL +
Sbjct: 19 SQSFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRC 78
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL--LTR 155
N G A FF WA + F HS ES+H L+E LG +QF ++W+ + + ++ ++
Sbjct: 79 KNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISS 138
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
EA F +M ++G+KP V D ++L+ LC K V AQE F K
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ G+VP K+Y+IL+ GW++ ++ +V EM D++ Y L++A CK+
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
D + EM + P + F+ I+ + A + ++ K P T+N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM 395
++ C + ++DDAY ++DEM Q G P++ TY+ I+ + A + RM
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM-DRT 377
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH-ANKLDA 454
C P TY+++L+L R D +W+ M R P + + V+I L KL+
Sbjct: 378 KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEE 437
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
AC+YF+ M+D GI P + L+ L+ G A K+++
Sbjct: 438 ACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 8/289 (2%)
Query: 222 VPD----LKSYTILLE--GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+PD L+SY IL+E G S+Q LL + + + FE + I+ AY +A
Sbjct: 95 IPDFAHSLESYHILVEILGSSKQFALL-WDFLIEAREYNYFEISSKVFWIVFRAYSRANL 153
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
EA ++ M E + P L++ L K ++ A EF+ K K G P TY+
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM 395
+V + A +V DEM + + Y+ +L L K+ Y +F+ M + +
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN-L 272
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
G +P ++ I + +CD + V D+M+ ++P ++ F +I LC K+D A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+M+ G P ++++ D A ++D+ + P
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 222/420 (52%), Gaps = 7/420 (1%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTES 123
K S+ P ++ AL + VE+ P L+ VLN+ +AG L FF WA KQ + HS E
Sbjct: 92 KFHSRVPK--LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEV 149
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+ ++++ L K+RQF +W L+E+M++ +L+ + VK+A+E ++M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
K+G +P+ F L+D LCK SV+ A +LF+ MR R V +L+ +T LL GW + +
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKM 268
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ V +M FEPD+V Y L++ Y A K +A +M+ + P+ + ++ L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I L R++EA++ + + + + TY A+V +C ++D Y V+D+M + G+
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
P+ TY I+ K + +E + +M ++ P + Y++++RL C + +
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKM-RQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+W++M G+ PG+ F ++I+ L L A +F++M+ G+ + + TLK L
Sbjct: 448 RLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ-YGTLKLLL 506
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 213/418 (50%), Gaps = 9/418 (2%)
Query: 60 DKICKILSKSPNSTIDAA--LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
DK+C L+K S D L+ V V+ LV +VL + SN A FF WA Q G+
Sbjct: 103 DKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGY 162
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDM---KQRKLLTRDTXXXXXXXXXXXXKVKEA 174
HS +++A+++ LGK R F ++W LV +M ++ KL+T DT K +A
Sbjct: 163 VHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKA 222
Query: 175 VETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
V+ F +MEK YG+K + N L+D L K S+E A E+F K+ + PD +++ IL+
Sbjct: 223 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIH 281
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + + + MK F PDVVTY + AYCK + EM+E P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ +++ LG K++ EAL YEK K +G P+ Y++++ + R DA +
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG--CEPTVSTYDIILRLF 411
++M GV + Y+ ++ + + A + +RM E G C P V TY +L++
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C ++++ + + M + + + +LI LC + K++ AC +F++ + G+ P
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 214/432 (49%), Gaps = 12/432 (2%)
Query: 70 PNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIE 129
P S++++AL + +E S ELV + ++LS++ +L S F WAE + GF S F +++
Sbjct: 84 PGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 130 ALGKIRQFKVIWNLVEDM----KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY- 184
+L K R+F++ W+LV D + L++ DT V++A+ FE Y
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 185 ---GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM---RHRGLVPDLKSYTILLEGWSQQ 238
E+ L+D LCK V +A +++ VP ++ + ILL GW +
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ L + ++ EMK +P VVTYG LI YC+ ++ A+ EM+ M + +F
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ +I+GLG RL EAL E+F P TYN++V +C + + A +++ M
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
GV P + TY+ + K T+E +++ ++ E G P TY +IL++ C++ +L
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL-IEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+ M V +M+ RGI P + +LI LC L+ A + F + GI P F +
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 479 QALIDAGMETTA 490
L GM A
Sbjct: 503 NGLRSKGMSDMA 514
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 119/281 (42%), Gaps = 5/281 (1%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETF 178
S F+ L+ + R+ K L E+MK + T T +V+ A+E
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E+M+ ++ FN ++D L ++ + +A + ++ P + +Y L++ + +
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+L +++ + M +P TY + K K +E + Y ++ E P +
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTY 428
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++ L D +L A++ ++ K G P+ T ++ C +++A+ D +
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVR 488
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
G+ P T+ +I + L + A +R+SS M P
Sbjct: 489 RGIIPQYITFKMIDNGLRSKGMSDMA----KRLSSLMSSLP 525
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 208/401 (51%), Gaps = 11/401 (2%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L + V+ S ELV E+L+++ N A +FF WA KQ+G+ S +H++I LGK+R+F
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177
Query: 138 KVIWNLVEDMKQ--RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
W L+++M++ L+ T V +A+ TF +++ L+ + DF
Sbjct: 178 DTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQS 237
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNE-VCREMKC 253
L+ LC+ K+V A L ++ P D KS+ I+L GW R E V EM
Sbjct: 238 LLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGN 295
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ DVV+Y +I+ Y K ++ + + M+++ + P +++ +++ L + E
Sbjct: 296 VGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSE 355
Query: 314 ALEFYEKF-KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A + + G P TYN+++ C + + ++A +V DEM + G+ P RTY +
Sbjct: 356 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
L RT +E + + +M +MGCEPTV TY +++R C D + +WD+M+ + +
Sbjct: 416 RIL---RTGEEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
P + + V+I L K++ A Y+++M D G+RP N+
Sbjct: 472 GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA + +M G+K +V ++ ++ K S+ K +LFD+M+ + PD K Y +
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 232 LEGWSQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ ++ + + + M+ E EP+VVTY LI CKA+K +EA + EM EK
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 291 MMPSPHIFST--------------------------------LINGLGSDKRLDEALEFY 318
+ P+ + LI L + D L +
Sbjct: 404 LFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW 463
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
++ K P+ +Y ++ + ++++AY EMK G+ PN D+I
Sbjct: 464 DEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 230/497 (46%), Gaps = 70/497 (14%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L DL++ +P V VL +L LA FF W+ + GFKHS ES+ + L R +
Sbjct: 101 LFDLTL--APIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMY 158
Query: 138 KVIWNLVEDMKQRK---------LLTRDTXXXXXXXXXXXXKV-------KEAVETFEKM 181
+++++M K TR+ V +EA++ F KM
Sbjct: 159 YDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKM 218
Query: 182 EKY-----------------------------------GLKPEVSDFNKLVDVLCKSKSV 206
+++ G +P V +N ++D +CK V
Sbjct: 219 KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E A+ LF++M+ RGLVPD +Y +++G+ + L EMK C EPDV+TY L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN +CK K + FY EM+ + P+ +STL++ + + +A++FY + G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
P TY +++ A C + DA+R+ +EM Q GV N TY ++ L A +EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
+F +M + G P +++Y+ ++ F + +D + + ++++ RGI P + ++ I L
Sbjct: 459 LFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG----------------METTA 490
C K++AA +M + GI+ + +++TL A +G +E T
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 491 IHFALKIDKLRKTPLVA 507
+ F + ID L K LV+
Sbjct: 578 VTFCVLIDGLCKNKLVS 594
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 192/406 (47%), Gaps = 16/406 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK----QRKLLTRDTXXXXXXXXXXX 168
K +G T +++++I+ GK+ + E+MK + ++T +
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG-- 346
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+ +E + +M+ GLKP V ++ LVD CK +++A + + MR GLVP+ +Y
Sbjct: 347 -KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T L++ + NL + EM E +VVTY LI+ C A++ EA + +M
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++P+ ++ LI+G K +D ALE + K G P+ Y + C +++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A V++EMK+CG+ NS Y ++ K+ E + M E+ E TV T+ +++
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTFCVLI 584
Query: 409 RLFCDEERLDMEMAVWDQMRAR-GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
C + + + ++++ G+ +F +I LC N+++AA F+QM+ G+
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 468 RPPANLFSTLKQALIDAG--METTAI-----HFALKIDKLRKTPLV 506
P +++L G +E A+ +K+D L T LV
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 139/330 (42%), Gaps = 40/330 (12%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXX 166
F+ ++ G + ++ +LI+A KI + L +M Q + T
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
++KEA E F KM+ G+ P ++ +N L+ K+K++++A EL ++++ RG+ PDL
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCEC------------------------------- 255
Y + G + + V EMK EC
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMK-ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 256 -----FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDK 309
E VVT+ +LI+ CK K +AV +++ + + + IF+ +I+GL D
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+++ A +E+ G P+ Y +++ + +A + D+M + G+ + Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
++ L Q+A S M E G P
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGE-GIHP 716
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 24 YPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV 83
Y A + L + +K + L G + +IP+ + + K+ N +D AL
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN--MDRAL----- 492
Query: 84 EVSPELVAEVLNKLSNAGV----LALSFFHWA----------------EKQKGFKHSTES 123
E+LN+L G+ L F W K+ G K ++
Sbjct: 493 --------ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
+ L++A K +L+++MK+ + +T T V +AV+ F ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 183 K-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+GL+ + F ++D LCK VE A LF++M +GLVPD +YT L++G +Q N+
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
L + +M + D++ Y L+ + +A F EM + + P + ++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 302 INGLGSDKRLDEALEF 317
+ +DEA+E
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+ A FE+M + GL P+ + + L+D K +V +A L DKM G+ DL +YT
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G S L + EM E PD V ++ + + DEAV + +
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 290 NMMPSPH 296
++ S +
Sbjct: 748 QLLTSDN 754
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 223/431 (51%), Gaps = 18/431 (4%)
Query: 69 SPNSTIDAALADLS----VEVSPELVAEVLNKLSNA--GV---LALSFFHWAEKQKGFKH 119
+P+ T+ A D S +VSP +V V+ K + G+ +L+FF+WA + + H
Sbjct: 89 NPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDH 148
Query: 120 -STESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
S ++ +I+ GK+RQF + W+L++ MK R + ++ +T EAV
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +ME YG P+ F+ ++ L + + +AQ FD ++ R PD+ YT L+ GW +
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR 267
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +V +EMK EP+V TY I+I+A C+ + A + +M + P+
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM- 356
F+ L+ R ++ L+ Y + K G P+T TYN ++ A+C +++A +V++ M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Query: 357 -KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEE 415
K+C V N+ T++ I ++ K R A+ ++ +M E CEP TY+I++R+F +
Sbjct: 388 KKKCEV--NASTFNTIFRYIEKKRDVNGAHRMYSKMM-EAKCEPNTVTYNILMRMFVGSK 444
Query: 416 RLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG-IRPPANLF 474
DM + + +M + + P ++ + +L++ C + A K F++M++ + P +L+
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 475 STLKQALIDAG 485
+ L AG
Sbjct: 505 EMVLAQLRRAG 515
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F++M+ G++P V ++ ++D LC+ + +A ++F M G P+ ++
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + +V +V +MK EPD +TY LI A+C+ + + AV + M +K
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ F+T+ + + ++ A Y K P T TYN ++ + S D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM V PN TY +++ AY +F+ M E P++S Y+++L
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 410 LFCDEERLDMEMAVWDQMRARGIL 433
+L + ++M +G++
Sbjct: 510 QLRRAGQLKKHEELVEKMIQKGLV 533
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 144/304 (47%), Gaps = 4/304 (1%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N+++D+ K + + A L D M+ R + ++++TIL+ + + M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PD + + I+I+ + ++ EA F+ ++++ P +++ L+ G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
EA + +++ K G P TY+ V+ A C ++ A+ V +M G PN+ T++ ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+KA T++ V+ +M ++GCEP TY+ ++ C +E L+ + V + M +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMK-KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIH 492
F + + ++ A + + +M++ P ++ L + + G ++T +
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV--GSKSTDMV 449
Query: 493 FALK 496
+K
Sbjct: 450 LKMK 453
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
SPH ++ +I+ G ++ D A + K+ T+ ++ Y + +A
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ M+ G P+ + I++ +L + R EA S F + EP V Y ++R +C
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCR 267
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ V+ +M+ GI P ++ + ++I ALC ++ A F MLD G P A
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
F+ L + + AG + ++ KL P
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 18/432 (4%)
Query: 64 KILSKSPNSTIDAALADLSVE-----VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
++LS P S +D A E + V E L SN AL FF+W E++ GF+
Sbjct: 19 RLLSVKPISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFR 78
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDM--KQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
H+TE+F+ +I+ LGK +F++ W L+ M + T V+EA++
Sbjct: 79 HTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAID 138
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL-FDK--MRHRGLVPDLKSYTILLE 233
++K++ + L+ E S +N LVD LC+ K V +A+EL F K + + V + K + ++L
Sbjct: 139 AYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILR 197
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
GWS+ + E ++M E D+ +Y I ++ CK+ K +AV Y EM+ + M
Sbjct: 198 GWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKL 257
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++T+I +G+ + ++ + + + + G P T+N ++ C RM DAYR++
Sbjct: 258 DVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML 317
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
DEM + G P+S TY + L K E S+F RM G P + TY +++R F
Sbjct: 318 DEMPKRGCQPDSITYMCLFSRLEKP---SEILSLFGRMIRS-GVRPKMDTYVMLMRKFER 373
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP---P 470
L + VW M+ G P + +I AL LD A +Y ++M++ G+ P P
Sbjct: 374 WGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRP 433
Query: 471 ANLFSTLKQALI 482
+ +L + L+
Sbjct: 434 ELVEKSLDETLV 445
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 207/449 (46%), Gaps = 5/449 (1%)
Query: 39 LPQNLSGSLRIHTLIPHTPHADKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKL 97
L N + +T + + IC +L P + + L+ LS + PE V VL +L
Sbjct: 16 LSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRL 75
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRD 156
+ A+ +F W E++ H ES+++L+ + + R F + ++ +M + +
Sbjct: 76 KDVN-RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T K++E + + M K+ +P S + L+ + LF +M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
+ G P + +T L+ G++++ + + EMK + D+V Y + I+++ K K
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
D A F+HE++ + P ++++I L RLDEA+E +E + N P T YN +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ Y + + D+AY +++ + G P+ Y+ IL L K EA VF M +
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
P +STY+I++ + C +LD + D M+ G+ P + +++ LC + KLD AC
Sbjct: 375 --PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 457 KYFQQMLDVGIRPPANLFSTLKQALIDAG 485
F++M P F +L L G
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 168/360 (46%), Gaps = 2/360 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE-AVETFEKM 181
+F +LI+ LGK+ + + + E M T KE + ++ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P++ N +D + K+ EK + +F++++ R VPD +SY+IL+ G +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ MK + D Y I+I+ +CK K ++A EM+ K P+ + ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+GL RLDEA +E+ K+ Y++++ + R+D+AY +++E+ Q G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
PN T++ +L L+KA EA F+ M E+ C P TY I++ C + +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
W +M+ +G+ P + +IS L A + A F + G P + ++ + + L
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE+++ P+ ++ L+ L K+ + ELF M+ +G V D ++Y I+++G+ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + ++ EMK + FEP VVTYG +I+ K + DEA + E + K + + I
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+S+LI+G G R+DEA E+ G P T+N+++ A + +++A MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ PN TY I+++ L K R +A+ ++ M + G +P+ +Y ++ +
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNI 778
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
A++D+ +A G +P + +I L + N+ A F++ G+
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 179/383 (46%), Gaps = 4/383 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A+ F EK + T +++ +I G +F ++L+E + + + +
Sbjct: 292 AVEMFEHLEKNRRVP-CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
KV EA++ FE+M+K P +S +N L+D+LC++ ++ A EL D M+ GL
Sbjct: 351 TCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P++++ I+++ + Q L + EM + PD +T+ LI+ K + D+A
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
Y +M + + + ++++LI + R ++ + Y+ +P+ N +
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ + + +E+K P++R+Y I++H LIKA E Y +F M E GC
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGCVLDTR 588
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
Y+I++ FC +++ + ++M+ +G P + + +I L ++LD A F++
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 463 LDVGIRPPANLFSTLKQALIDAG 485
I ++S+L G
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVG 671
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 151/282 (53%), Gaps = 13/282 (4%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXX 168
++ K++G T +++ +I+ K + + L+E+MK + T T
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
++ EA FE+ + ++ V ++ L+D K +++A + +++ +GL P+L ++
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 229 TILLEGWSQQQNLLRVNE--VC----REMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
LL+ + + +NE VC +E+KC P+ VTYGILIN CK +K+++A F
Sbjct: 696 NSLLDALVKAE---EINEALVCFQSMKELKCT---PNQVTYGILINGLCKVRKFNKAFVF 749
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ EMQ++ M PS ++T+I+GL + EA +++FKANG P++ YNA++
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
R DA+ + +E ++ G+ +++T ++L L K ++A
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMP-SPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
+I + K + A+ ++ + + +P P +++L+ + + D + +
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
GF P T +V + ++ + Y VV M++ P Y ++ +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
++F++M E+G EPTV + ++R F E R+D +++ D+M++ + + ++ V I
Sbjct: 188 LTLFQQMQ-ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ K+D A K+F ++ G++P ++++ L A A+ ++K R+ P
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 213/410 (51%), Gaps = 15/410 (3%)
Query: 77 ALADLSVEVSPELVAEVLNKLS---NAGVLALSFFHWAEKQKGFKHSTESFHALIEALGK 133
+L+ + +S +L+ VL ++ + L F+ +A +GF HS+ S ++ LG+
Sbjct: 61 SLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGR 120
Query: 134 IRQFKVIWNLVEDMKQ--RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVS 191
R+F IW L+ + K+ R L++ T V++ VE+F K ++ L P+
Sbjct: 121 NRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFF 178
Query: 192 D---FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
D FN L+ LC+ KS+ A+ ++ ++H+ PDL+++ ILL GW + E
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEE- 236
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
MK + +PDVVTY LI+ YCK ++ ++A +M+E+ P ++T+I GLG
Sbjct: 237 --MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+ D+A E ++ K G P+ YNA + +C + R+ DA ++VDEM + G+ PN+ TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
++ L A ++ ++ RM C P + ++++F E++DM M +W+ M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGN-ECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+G V VL+ LC K++ A K +M++ G RP F +K
Sbjct: 414 VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIK 463
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 35/247 (14%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKA------------------------------- 209
M+ GLKP+V +N L+DV CK + +EKA
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 210 ----QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
+E+ +M+ G PD+ +Y + + + L +++ EM + P+ TY +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
A + Y M +P+ LI +++D A+ +E G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
F + + ++ C ++++A + + EM + G P++ ++ I + A E
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVN 476
Query: 386 SVFRRMS 392
++ ++M+
Sbjct: 477 NLIQKMA 483
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 201/397 (50%), Gaps = 9/397 (2%)
Query: 57 PHADK--ICKILSKSPNSTIDAALADLSVEVSP---ELVAEVLNKLSNAGVLALSFFHWA 111
P AD I K++ SPN+T LS + +P LV VL +L N G AL FFH+
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFL 80
Query: 112 EKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXX 169
+ + + H SF I+ ++ +W+L+ M+ ++ + T
Sbjct: 81 DNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAG 140
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +AV+ F M ++G +++ FN ++DVLCKSK VEKA ELF +R R V D +Y
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYN 199
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L GW + + EV +EM P++ TY ++ + +A + A F+ EM+++
Sbjct: 200 VILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++T+++G G + A +++ G P TYNA++ C +++A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +EM + G PN TY++++ L A + +RM +E GCEP TY++++R
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIR 378
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
+ + ++ + ++++M + LP + + +LIS +
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 218 HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYD 277
HR V D S+ + ++ ++ V + M+ P T+ I+ Y A K D
Sbjct: 84 HREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD 143
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+AV + M E F+T+++ L KR+++A E + + F+ +T TYN ++
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVIL 202
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC 397
+C R A V+ EM + G+ PN TY+ +L +A + A+ F M C
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-DC 261
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
E V TY ++ F + V+D+M G+LP + + +I LC + ++ A
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 458 YFQQMLDVGIRPPANLFSTLKQALIDAG 485
F++M+ G P ++ L + L AG
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
++G + +++ +++ + Q + W +MK+R + T ++K
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F++M + G+ P V+ +N ++ VLCK +VE A +F++M RG P++ +Y +L+
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G R E+ + M+ E EP+ TY ++I Y + + ++A+G + +M + +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 293 PSPHIFSTLINGLGSDKRLDE 313
P+ ++ LI+G+ KR ++
Sbjct: 403 PNLDTYNILISGMFVRKRSED 423
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 212/428 (49%), Gaps = 12/428 (2%)
Query: 74 IDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALG- 132
++ AL + SV+++ +V ++L +L A FF WA Q+ + H +++ +I+ L
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 133 ---KIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLK-- 187
K +QF+++ ++++ MK+ + V+ F K ++ +K
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQ 231
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
PE++ FN L+D LCK V++ + L +MRHR + PD ++ +L GW + ++ + ++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM---PSPHIFSTLING 304
EM +P+ TY I+ +C+A DEA + M K P+ F+ +I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
L + + +E E + + G P+ TY V+ C + ++D+AY+ +DEM G P+
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
TY+ L L + R T EA ++ RM E C P+V TY++++ +F + + D W
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+M R + + + +I+ L ++ AC +++++ G++ P +F + L +
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 485 GMETTAIH 492
G AIH
Sbjct: 530 G-NLKAIH 536
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 3/224 (1%)
Query: 171 VKEAVETFEKMEKYGLK---PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
V EA + F+ M G P F ++ L K+ E+ EL +M G +PD+ +
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y ++EG + + + EM + + PD+VTY + C+ +K DEA+ Y M
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
E PS ++ LI+ D A + + + TY A++ R
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAK 498
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+A +++E+ G+ R +D L L + + + V M
Sbjct: 499 EACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 2/367 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG+ S+ ++ + + +W L+E MK++ L K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M + G+ P+ + L+D CK + A + F +M R + PD+ +YT ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q +++ ++ EM C+ EPD VT+ LIN YCKA +A ++ M + P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TLI+GL + LD A E + G P TYN++V C S +++A ++V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
E + G+ ++ TY ++ K+ +A + + M + G +PT+ T+++++ FC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
L+ + + M A+GI P F L+ C N L AA ++ M G+ P
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 474 FSTLKQA 480
+ L +
Sbjct: 634 YENLVKG 640
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A M + G P V + L+D LCK ++ A EL +M GL P++ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G + N+ ++ E + D VTY L++AYCK+ + D+A EM K
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ L+NG L++ + A G AP T+N++V YC + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ +M GVGP+ +TY+ ++ KAR +EA+ +F+ M + G +VSTY ++++
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKG 675
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVF 439
F ++ V+DQMR G+ +F
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ME G P+V ++ +V+ C+ ++K +L + M+ +GL P+ Y
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + L E EM + PD V Y LI+ +CK A F++EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P ++ +I+G + EA + + + G P++ T+ ++ YC + M DA
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+RV + M Q G PN TY ++ L K A + M ++G +P + TY+ I+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVN 499
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C ++ + + + A G+ + L+ A C + ++D A + ++ML G++P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 470 PANLFSTLKQALIDAGM 486
F+ L GM
Sbjct: 560 TIVTFNVLMNGFCLHGM 576
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K A+ F + + G+ V+ +N ++ +C+ +++A L M +G PD+ SY+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + L +V ++ MK + +P+ YG +I C+ K EA + EM +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P +++TLI+G + A +F+ + + P+ TY A++ +C M +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM G+ P+S T+ +++ KA ++A+ V M + GC P V TY ++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLID 464
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C E LD + +M G+ P + + +++ LC + ++ A K + G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 470 PANLFSTLKQALIDAG 485
++TL A +G
Sbjct: 525 DTVTYTTLMDAYCKSG 540
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 171/432 (39%), Gaps = 58/432 (13%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL 152
VL K+ L L FF WA ++ + ES +I + KV +L+ +R
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 153 LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSD---FNKLVDVLCKSKSVEKA 209
L V ++ F + Y K SD F+ VL + +A
Sbjct: 151 LN----------------VTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 210 QELFDKMRHRGLVPDLKSYTILLE------------------------GWSQQQNLLRVN 245
+ +F+KM + GLV + S + L W+ + ++
Sbjct: 195 RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 246 EVCR------------EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
VC+ M+ + + PDV++Y ++N YC+ + D+ M+ K + P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +I+ ++I L +L EA E + + G P+T Y ++ +C + A +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM + P+ TY I+ + EA +F M + G EP T+ ++ +C
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCK 433
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ V + M G P + + LI LC LD+A + +M +G++P
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 474 FSTLKQALIDAG 485
++++ L +G
Sbjct: 494 YNSIVNGLCKSG 505
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 2/281 (0%)
Query: 91 AEVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
E++N AG + +F H Q G + ++ LI+ L K L+ +M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 150 RKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
L T ++EAV+ + E GL + + L+D CKS ++K
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
AQE+ +M +GL P + ++ +L+ G+ L ++ M + P+ T+ L+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
YC A Y +M + + P + L+ G + + EA +++ K GF+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
TY+ ++ + + +A V D+M++ G+ + +D
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+ P + FN LV C +++ A ++ M RG+ PD K+Y L++G + +N+
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ +EMK + F V TY +LI + K KK+ EA + +M+ + G
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE--------------G 696
Query: 305 LGSDKRLDEALEFYEKFKANGFAPET 330
L +DK E +F+ K G P+T
Sbjct: 697 LAADK---EIFDFFSDTKYKGKRPDT 719
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K A ++ M G+ P+ + LV CK++++++A LF +M+ +G + +Y++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ +++ L EV +M+ E D + + K K+ D V E+ E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 291 MM 292
++
Sbjct: 732 LV 733
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 2/367 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG+ S+ ++ + + +W L+E MK++ L K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M + G+ P+ + L+D CK + A + F +M R + PD+ +YT ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q +++ ++ EM C+ EPD VT+ LIN YCKA +A ++ M + P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TLI+GL + LD A E + G P TYN++V C S +++A ++V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
E + G+ ++ TY ++ K+ +A + + M + G +PT+ T+++++ FC
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
L+ + + M A+GI P F L+ C N L AA ++ M G+ P
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 474 FSTLKQA 480
+ L +
Sbjct: 634 YENLVKG 640
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A M + G P V + L+D LCK ++ A EL +M GL P++ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G + N+ ++ E + D VTY L++AYCK+ + D+A EM K
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ L+NG L++ + A G AP T+N++V YC + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ +M GVGP+ +TY+ ++ KAR +EA+ +F+ M + G +VSTY ++++
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKG 675
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVF 439
F ++ V+DQMR G+ +F
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ME G P+V ++ +V+ C+ ++K +L + M+ +GL P+ Y
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + L E EM + PD V Y LI+ +CK A F++EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P ++ +I+G + EA + + + G P++ T+ ++ YC + M DA
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+RV + M Q G PN TY ++ L K A + M ++G +P + TY+ I+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVN 499
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C ++ + + + A G+ + L+ A C + ++D A + ++ML G++P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 470 PANLFSTLKQALIDAGM 486
F+ L GM
Sbjct: 560 TIVTFNVLMNGFCLHGM 576
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K A+ F + + G+ V+ +N ++ +C+ +++A L M +G PD+ SY+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + L +V ++ MK + +P+ YG +I C+ K EA + EM +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P +++TLI+G + A +F+ + + P+ TY A++ +C M +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM G+ P+S T+ +++ KA ++A+ V M + GC P V TY ++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLID 464
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C E LD + +M G+ P + + +++ LC + ++ A K + G+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 470 PANLFSTLKQALIDAG 485
++TL A +G
Sbjct: 525 DTVTYTTLMDAYCKSG 540
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 171/432 (39%), Gaps = 58/432 (13%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL 152
VL K+ L L FF WA ++ + ES +I + KV +L+ +R
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 153 LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSD---FNKLVDVLCKSKSVEKA 209
L V ++ F + Y K SD F+ VL + +A
Sbjct: 151 LN----------------VTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 210 QELFDKMRHRGLVPDLKSYTILLE------------------------GWSQQQNLLRVN 245
+ +F+KM + GLV + S + L W+ + ++
Sbjct: 195 RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 246 EVCR------------EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
VC+ M+ + + PDV++Y ++N YC+ + D+ M+ K + P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +I+ ++I L +L EA E + + G P+T Y ++ +C + A +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM + P+ TY I+ + EA +F M + G EP T+ ++ +C
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCK 433
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ V + M G P + + LI LC LD+A + +M +G++P
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 474 FSTLKQALIDAG 485
++++ L +G
Sbjct: 494 YNSIVNGLCKSG 505
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 2/281 (0%)
Query: 91 AEVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
E++N AG + +F H Q G + ++ LI+ L K L+ +M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 150 RKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
L T ++EAV+ + E GL + + L+D CKS ++K
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
AQE+ +M +GL P + ++ +L+ G+ L ++ M + P+ T+ L+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
YC A Y +M + + P + L+ G + + EA +++ K GF+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
TY+ ++ + + +A V D+M++ G+ + +D
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+ P + FN LV C +++ A ++ M RG+ PD K+Y L++G + +N+
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ +EMK + F V TY +LI + K KK+ EA + +M+ + G
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE--------------G 696
Query: 305 LGSDKRLDEALEFYEKFKANGFAPET 330
L +DK E +F+ K G P+T
Sbjct: 697 LAADK---EIFDFFSDTKYKGKRPDT 719
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K A ++ M G+ P+ + LV CK++++++A LF +M+ +G + +Y++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ +++ L EV +M+ E D + + K K+ D V E+ E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 291 MM 292
++
Sbjct: 732 LV 733
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 194/380 (51%), Gaps = 2/380 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+GF+ S +++ +L+ LGK R + L+++M+ L T K+ E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E ++M+ G P+V + L+D LC ++ ++ A+E+F+KM+ PD +Y LL+
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S ++L V + EM+ + PDVVT+ IL++A CKA + EA M+++ ++P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ H ++TLI GL RLD+ALE + ++ G P TY + Y S A
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
++MK G+ PN + L+ L KA +EA +F + ++G P TY+++++ +
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSK 515
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+D + + +M G P + V LI+ L A+++D A K F +M ++ ++P
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 474 FSTLKQALIDAGMETTAIHF 493
++TL L G AI
Sbjct: 576 YNTLLAGLGKNGKIQEAIEL 595
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 196/428 (45%), Gaps = 45/428 (10%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXX 160
+ S+F H+TE+ + ++EAL GK+ + ++ D+ Q++++ RDT
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVF----DLMQKRIIKRDTNTY 156
Query: 161 XXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
K +K+A KM ++G +N L+ +L KS+ +A E++ +M
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC------------------------E 254
G P L++Y+ L+ G +++++ V + +EM+ E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 255 CFE-----------PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+E PDVVTY +LI+A C A+K D A + +M+ P + TL++
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
++ LD +F+ + + +G P+ T+ +V A C + +A+ +D M+ G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
N TY+ ++ L++ +A +F M S +G +PT TY + + + +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMES-LGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+++M+ +GI P + + +L A + A + F + D+G+ P + ++ + +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 484 AGMETTAI 491
G AI
Sbjct: 516 VGEIDEAI 523
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 37/344 (10%)
Query: 171 VKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V A FEK K G++P++ +N L+ L ++ +E AQ++F +++ G +PD+ +Y
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 230 ILLEGWSQQQNLLRVNEVCREM---KCEC------------------------------- 255
LL+ + + + + E+ +EM +CE
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 256 --FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
F P TYG LI+ K+ + EA + M + P+ I++ LING G D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A +++ G P+ TY+ +V C R+D+ E+K+ G+ P+ Y++I++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
L K+ +EA +F M + G P + TY+ ++ ++ ++++++ G+
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
P + F LI + K + A +Q M+ G P + L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 36/370 (9%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ETFEKM+ G+ P + N + L K+ +A+++F ++ GLVPD +Y ++++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ + ++ EM EPDV+ LIN KA + DEA + M+E + P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TL+ GLG + ++ EA+E +E G P T T+N + C + + A +++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE--------PTV---- 401
+M G P+ TY+ I+ L+K +EA F +M + + P V
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 402 ---STYDIILRLFCD-------------------EERLDMEMAVWDQMRARGIL-PGMHV 438
Y II + E +D ++ +++ A GI G +
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 439 FFVLISALCHANKLDAACKYFQQML-DVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
+I C N + A F++ D+G++P ++ L L++A M A L++
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 498 DKLRKTPLVA 507
P VA
Sbjct: 812 KSTGCIPDVA 821
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA +T + M G+ P + +N L+ L + ++ A ELF M G+ P +Y + +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + + + + E +MK + P++V + + KA + EA ++ +++ ++
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ ++ +DEA++ + NG P+ N+++ + R+D+A+++
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
MK+ + P TY+ +L L K QEA +F M + GC P T++ + C
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLC 619
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ + + + + +M G +P + + +I L ++ A +F QM
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 171/443 (38%), Gaps = 75/443 (16%)
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEK 183
++LI L K + W + MK+ KL T T K++EA+E FE M +
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 184 YGLKPEVSDFNKLVDVLC-----------------------------------KSKSVEK 208
G P FN L D LC K+ V++
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEG---------------------WSQQQNLL---RV 244
A F +M+ + + PD + LL G Q NL +
Sbjct: 662 AMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 245 NEVCREMKCE---CFEPDVVTYGI----------LINAYCKAKKYDEAVGFYHEM-QEKN 290
+ E + F +V GI +I CK A + + ++
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++ LI GL ++ A + + + K+ G P+ TYN ++ AY S ++D+ +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ EM N+ T++I++ L+KA +A ++ + S+ PT TY ++
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
RL +++ M G P ++ +LI+ A + DAAC F++M+ G+RP
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 471 ANLFSTLKQALIDAGMETTAIHF 493
+S L L G +H+
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHY 983
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 201 CKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
CK +V A+ LF+K + G+ P L +Y +L+ G + + +V ++K PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
V TY L++AY G ++DE E Y+
Sbjct: 820 VATYNFLLDAY-----------------------------------GKSGKIDELFELYK 844
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV-DEMKQCGVGPNSRTYDIILHHLIKA 378
+ + T T+N V+ + +DDA + D M P + TY ++ L K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
EA +F M + GC P + Y+I++ F D A++ +M G+ P +
Sbjct: 905 GRLYEAKQLFEGML-DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ VL+ LC ++D YF+++ + G+ P ++ + L
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 146/318 (45%), Gaps = 3/318 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA++ +M + G +P+V N L++ L K+ V++A ++F +M+ L P + +Y
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + + E+ M + P+ +T+ L + CK + A+ +M +
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+P ++T+I GL + ++ EA+ F+ + K + P+ T ++ + ++DA
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDA 696
Query: 350 YRVVDE-MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
Y+++ + C P + ++ ++ ++ A S R+ + C S I+
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 409 RLFCDEERLDMEMAVWDQM-RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
R C + ++++ + G+ P + + +LI L A+ ++ A F Q+ G
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 468 RPPANLFSTLKQALIDAG 485
P ++ L A +G
Sbjct: 817 IPDVATYNFLLDAYGKSG 834
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSY 228
+V E + F+++++ GL P+V +N +++ L KS +E+A LF++M+ RG+ PDL +Y
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ + ++ E++ EP+V T+ LI Y + K + A Y M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 289 KNMMPSPHIFSTLIN 303
P+ + L N
Sbjct: 1096 GGFSPNTGTYEQLPN 1110
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 198/423 (46%), Gaps = 8/423 (1%)
Query: 60 DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKH 119
D+ ++ KS T D + SV +LV + ++LS ALS H A+ GF
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSV---FDLVVKSYSRLSLIDK-ALSIVHLAQAH-GFMP 167
Query: 120 STESFHALIEA-LGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVET 177
S++A+++A + R N+ ++M + ++ T + A+
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F+KME G P V +N L+D CK + ++ +L M +GL P+L SY +++ G +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + V+ V EM + D VTY LI YCK + +A+ + EM + PS
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+++LI+ + ++ A+EF ++ + G P TY +V + M++AYRV+ EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G P+ TY+ +++ ++A +V M E G P V +Y +L FC +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
D + V +M +GI P + LI C + AC +++ML VG+ P ++ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 478 KQA 480
A
Sbjct: 527 INA 529
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 203/481 (42%), Gaps = 64/481 (13%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
ADK L + P L LS +PE + +L K N L L F +WA + F
Sbjct: 25 ADKALTFLKRHP-----YQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFT 79
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-------------LTRDTXXXXXXXX 165
+ + L K + +K L ED+ + L T D
Sbjct: 80 LRCKCI--TLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVF 137
Query: 166 XXXXK-------VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK-------------- 204
K + +A+ + +G P V +N ++D +SK
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 205 ----------------------SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+++ A LFDKM +G +P++ +Y L++G+ + + +
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
++ R M + EP++++Y ++IN C+ + E EM + ++TLI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
G + +AL + + +G P TY +++ + C + M+ A +D+M+ G+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
PN RTY ++ + EAY V R M+ G P+V TY+ ++ C +++ +A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
V + M+ +G+ P + + ++S C + +D A + ++M++ GI+P +S+L Q
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 483 D 483
+
Sbjct: 497 E 497
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 50/402 (12%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKE 173
KG + + S++ +I L + + K + ++ +M +R L T +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +M ++GL P V + L+ +CK+ ++ +A E D+MR RGL P+ ++YT L++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN------------------------- 268
G+SQ+ + V REM F P VVTY LIN
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 269 ----------AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
+C++ DEA+ EM EK + P +S+LI G +R EA + Y
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
E+ G P+ TY A++ AYC ++ A ++ +EM + GV P+ TY ++++ L K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDII--------------LRLFCDEERLDMEMAVW 424
T+EA + ++ E V+ + +I ++ FC + + V+
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+ M + P + ++I C A + A +++M+ G
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 59/319 (18%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A+ E M++ GL P+V ++ ++ C+S V++A + +M +G+ PD +Y+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 230 ILLEGWSQQQNLLRVNEVC---REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L++G+ +Q+ R E C EM PD TY LINAYC ++A+ ++EM
Sbjct: 490 SLIQGFCEQR---RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALE-----FYEK-------------------FK 322
EK ++P +S LINGL R EA FYE+ FK
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 323 A-----NGFA---------------------PETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ GF P+ YN ++ +C + + AY + EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT-VSTYDIILRLFCDEE 415
+ G ++ T ++ L K E SV + CE + +++ + E
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR--SCELSEAEQAKVLVEINHREG 724
Query: 416 RLDMEMAVWDQMRARGILP 434
+D+ + V +M G LP
Sbjct: 725 NMDVVLDVLAEMAKDGFLP 743
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 50/246 (20%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ KEA + +E+M + GL P+ + L++ C +EKA +L ++M +G++PD+ +Y+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 230 ILLEGWSQQQN-------LLRV-------------------------------------- 244
+L+ G ++Q LL++
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 245 -----NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++V M + +PD Y I+I+ +C+A +A Y EM + +
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L+ L + +++E + E +V MD V+ EM +
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Query: 360 GVGPNS 365
G PN
Sbjct: 740 GFLPNG 745
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 4/369 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXX 161
AL+F Q GF +F+ L+ L K K +++ M Q D T
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY-DPDVYTYNSV 336
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+VKEAVE ++M P +N L+ LCK VE+A EL + +G+
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
+PD+ ++ L++G +N E+ EM+ + EPD TY +LI++ C K DEA+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+M+ S ++TLI+G + EA E +++ + +G + + TYN ++ C
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
S R++DA +++D+M G P+ TY+ +L H + ++A + + M+S GCEP +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDI 575
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
TY ++ C R+++ + ++ +GI H + +I L K A F++
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 462 MLDVGIRPP 470
ML+ PP
Sbjct: 636 MLEQNEAPP 644
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 223/481 (46%), Gaps = 41/481 (8%)
Query: 15 SSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTI 74
SS + + P+ A+L+ S +KL +L P A ++ + SK PN +
Sbjct: 33 SSTISFASPHSAALS----STDVKLLDSLRSQ-------PDDSAALRLFNLASKKPNFSP 81
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS-----TESFHALIE 129
+ P L E+L +L +G SF + + K S T +F LIE
Sbjct: 82 E-----------PALYEEILLRLGRSG----SFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 130 ALGKIRQFKVIWNLVEDMKQRKLLTRDT--XXXXXXXXXXXXKVKEAVETFEKMEKYGLK 187
+ + I ++V+ M L DT +K + KM +G+K
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL---LRV 244
P+VS FN L+ LC++ + A + + M GLVPD K++T +++G+ ++ +L LR+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN-MMPSPHIFSTLIN 303
E E C V+ ++++ +CK + ++A+ F EM ++ P + F+TL+N
Sbjct: 247 REQMVEFGCSWSN---VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
GL + A+E + G+ P+ TYN+V+ C + +A V+D+M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
N+ TY+ ++ L K +EA + R ++S+ G P V T++ +++ C + M +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+++MR++G P + +LI +LC KLD A +QM G ++TL
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 484 A 484
A
Sbjct: 483 A 483
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 159/323 (49%), Gaps = 1/323 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
VK A+E + M + G P+V +N ++ LCK V++A E+ D+M R P+ +Y
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ ++ + E+ R + + PDV T+ LI C + + A+ + EM+ K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P ++ LI+ L S +LDEAL ++ + +G A TYN ++ +C + + +A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ DEM+ GV NS TY+ ++ L K+R ++A + +M E G +P TY+ +L
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTH 549
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
FC + + M + G P + + LIS LC A +++ A K + + GI
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 471 ANLFSTLKQALIDAGMETTAIHF 493
+ ++ + Q L T AI+
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINL 632
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 184/409 (44%), Gaps = 4/409 (0%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLAL-SFFHWAEKQKGFKHSTESFHALIEA 130
S +D + + ++ +LN L + L L H G K +F+ LI+A
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 131 LGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPE 189
L + Q + ++EDM L+ + T + A+ E+M ++G
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
N +V CK VE A +M ++ G PD ++ L+ G + ++ E+
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
M E ++PDV TY +I+ CK + EAV +M ++ P+ ++TLI+ L +
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+++EA E + G P+ T+N+++ C + A + +EM+ G P+ TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
++++ L EA ++ ++M GC +V TY+ ++ FC + ++D+M
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
G+ + LI LC + +++ A + QM+ G +P +++L
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 175/385 (45%), Gaps = 4/385 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
AL F+ A K+ F + ++ LG+ F + ++EDMK + +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 164 XXXXXXKVKEAVETFEK--MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
++++ + + ++++GLKP+ +N+++++L S++ + KM G+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
PD+ ++ +L++ + L + +M PD T+ ++ Y + D A+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNAVVGAY 340
+M E S + +++G + R+++AL F ++ +GF P+ T+N +V
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
C + + A ++D M Q G P+ TY+ ++ L K +EA V +M + C P
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPN 364
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
TY+ ++ C E +++ + + ++GILP + F LI LC A + F+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 461 QMLDVGIRPPANLFSTLKQALIDAG 485
+M G P ++ L +L G
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKG 449
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 161/379 (42%), Gaps = 55/379 (14%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD------TXXXXXXXXXX 167
Q+G+ +++++I L K+ + K +++ M +TRD T
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-----ITRDCSPNTVTYNTLISTLCK 377
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD--- 224
+V+EA E + G+ P+V FN L+ LC +++ A ELF++MR +G PD
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 225 --------------------------------LKSYTILLEGWSQQQNLLRVNEVCREMK 252
+ +Y L++G+ + E+ EM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ VTY LI+ CK+++ ++A +M + P + +++L+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A + + +NG P+ TY ++ C + R++ A +++ ++ G+ Y+ ++
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD-----EERLDMEMAVWDQM 427
L + R T EA ++FR M + P +Y I+ R C+ E +D + + +
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE-- 675
Query: 428 RARGILPGMHVFFVLISAL 446
+G +P ++L L
Sbjct: 676 --KGFVPEFSSLYMLAEGL 692
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 15/223 (6%)
Query: 278 EAVGFYHEMQEKNMMP--------SPH---IFST---LINGLGSDKRLDEALEFYE-KFK 322
+AV H N+ P SPH + ST L++ L S AL + K
Sbjct: 16 QAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASK 75
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
F+PE Y ++ S DD +++++MK + T+ I++ +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
E SV M E G +P Y+ +L L D L + +M GI P + F VL
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
I ALC A++L A + M G+ P F+T+ Q I+ G
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 205/434 (47%), Gaps = 5/434 (1%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S I +L+ L + +S ++VA+VLN+ + +G ++FF WA ++ G S+ ++ AL
Sbjct: 102 SAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL 161
Query: 132 GKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
G+ + F + ++++ M + + V+ A+E FE+ E +G+K
Sbjct: 162 GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCST 221
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCR 249
FN L+ LC+ V A+ +F+ +G +P D SY I++ GWS+ + + +V +
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLK 279
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
EM F PD ++Y LI + + +++V + ++ K +P ++++ +I S +
Sbjct: 280 EMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
DE++ +Y + P TY+ +V ++ DA + +EM GV P +
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRA 429
L L A ++++ S + GC + S Y ++L+ + M + VWD+M+
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQK-SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 458
Query: 430 RGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
G + V+ ++ LC L+ A ++ + G P ++S L L+ +
Sbjct: 459 SGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTEL 518
Query: 490 AIHFALKIDKLRKT 503
A LKI K R T
Sbjct: 519 AYKLFLKIKKARAT 532
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 7/259 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVK 172
+ GF S+ LIE LG+ + + +++K + + +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E++ + +M +P + ++KLV L K + V A E+F++M RG++P T L
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 233 E---GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ + + + + R+ C E Y +L+ + K + + EMQE
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISES---AYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ +++GL L+ A+ E+ GF P Y+ + S + + A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 350 YRVVDEMKQCGVGPNSRTY 368
Y++ ++K+ N+R++
Sbjct: 520 YKLFLKIKKARATENARSF 538
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 238/543 (43%), Gaps = 91/543 (16%)
Query: 1 MAFSRSPKRFFNLFSSNLPLSKPYPASLTPLS-TSPTIKLPQNLSGSLRIHTLIPHTPHA 59
++ SR+ R+ +F+S+ S P P + P + S +K +NL +P +P
Sbjct: 42 LSSSRTSVRW--VFNSS---SLPPPEWIEPFNDVSDLVKSNRNL---------LP-SPWV 86
Query: 60 DKICKIL--SKSPNSTIDAALADLSVEVSPELVAEVL--NKLSNAGVLALSFFHWAEKQK 115
+I +L S S S +D +++SP V+ VL +++ +A SFF W+ KQK
Sbjct: 87 SQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQK 146
Query: 116 GFKHSTESF-----------------------------------HALIEALGKIRQFKVI 140
+ H+ E + +ALI++ GK+ + +
Sbjct: 147 KYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEEL 206
Query: 141 WNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ MK+ + T T V A FE ME +KP++ +N ++
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL------------------ 241
CK+ +KA E M RG D +Y +++ +
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 242 -----LRVNEVCREMKCE----CFE--------PDVVTYGILINAYCKAKKYDEAVGFYH 284
L + +C+E K FE P+V Y +LI+ Y K+ ++A+ H
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
M ++ P +S ++NGL + R++EAL+++ + +G A + Y++++ +
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
R+D+A R+ +EM + G +S Y+ ++ K R EA ++F+RM E GC+ TV TY
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
I+L E R + + +WD M +GI P F L + LC + K+ ACK ++
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAP 566
Query: 465 VGI 467
+G+
Sbjct: 567 MGV 569
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A+ +M G KP+V ++ +V+ LCK+ VE+A + F R GL + Y+
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + + + EM + D Y LI+A+ K +K DEA+ + M+E+
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 291 MM-PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++ L++G+ + R +EAL+ ++ G P + A+ C S ++ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
+++DE+ GV ++ D+I + L KA +EA
Sbjct: 558 CKILDELAPMGVILDAACEDMI-NTLCKAGRIKEA 591
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
+L+ Y L++ + +++ R+ V E+K F V LI ++ K +E + +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
+M+E + P+ + ++ L+NGL S +D A +E ++ P+ TYN ++ YC +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+ A + +M+ G + TY ++ ++++ M E G +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD-EKGIQVPPHA 329
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ +++ C E +L+ V++ M +G P + ++ VLI + ++ A + +M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 464 DVGIRPPANLFSTLKQALIDAGMETTAIHF 493
D G +P +S + L G A+ +
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 1/290 (0%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
LVDVL +K V++ + + +++ + + L++ + + + + V R+MK
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
EP + TY L+N A D A + M+ + P ++T+I G + +A+
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
E + G + TY ++ A + EM + G+ + +++ L
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K E Y+VF M + G +P V+ Y +++ + ++ + + +M G P
Sbjct: 338 CKEGKLNEGYTVFENMIRK-GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ + V+++ LC +++ A YF G+ + +S+L L AG
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 87 PELV--AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
P++V + V+N L G + AL +FH + G ++ + +LI+ LGK +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 143 LVEDMKQRKLLTRDTX--XXXXXXXXXXXKVKEAVETFEKMEKY-GLKPEVSDFNKLVDV 199
L E+M + K TRD+ KV EA+ F++ME+ G V + L+
Sbjct: 454 LFEEMSE-KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+ K E+A +L+D M +G+ P + L G + R ++ E+ D
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
+IN CKA + EA + E+ I + +IN L + D A++
Sbjct: 573 AACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 188/412 (45%), Gaps = 37/412 (8%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKME 182
F+ L A+ K +Q++++ L + M+ + + + T K+ A T K+
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
K G +P+ FN L++ LC V +A EL D+M G P L + L+ G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+ M F+P+ VTYG ++N CK+ + A+ +M+E+N+ +S +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD-------------- 348
+GL D LD A + + + GF + TYN ++G +C + R DD
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 349 ---------------------AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
A +++ EM Q G+ PN+ TY+ ++ K +EA +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
M S+ GC+P + T++I++ +C R+D + ++ +M RG++ + L+ C
Sbjct: 391 VDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 448 HANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
+ KL+ A K FQ+M+ +RP + L L D G A+ KI+K
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 161/304 (52%), Gaps = 7/304 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV ++M + G +P + +++V+CKS A EL KM R + D Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I+++G + +L + EM+ + F+ D++TY LI +C A ++D+ +M ++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ FS LI+ + +L EA + ++ G AP T TYN+++ +C R+++A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++VD M G P+ T++I+++ KA + +FR MS G TY+ +++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQ 446
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM------L 463
FC +L++ ++ +M +R + P + + +L+ LC +L+ A + F ++ L
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 464 DVGI 467
D+GI
Sbjct: 507 DIGI 510
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 176/379 (46%), Gaps = 4/379 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
+ GF+ + ++ ++ + K Q + L+ M++R + L +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F +ME G K ++ +N L+ C + + +L M R + P++ ++++L+
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L +++ +EM P+ +TY LI+ +CK + +EA+ M K
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P F+ LING R+D+ LE + + G T TYN +V +C S +++ A ++
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLF 411
EM V P+ +Y I+L L ++A +F ++ S+M E + Y II+
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM--ELDIGIYMIIIHGM 518
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C+ ++D ++ + +G+ + ++IS LC + L A F++M + G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 472 NLFSTLKQALIDAGMETTA 490
++ L +A + TTA
Sbjct: 579 LTYNILIRAHLGDDDATTA 597
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 182/373 (48%), Gaps = 7/373 (1%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+++ L G L +F + E + KGFK +++ LI ++ L+ DM +RK
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 152 LL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
+ T K++EA + ++M + G+ P +N L+D CK +E+A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
++ D M +G PD+ ++ IL+ G+ + + E+ REM + VTY L+ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C++ K + A + EM + + P + L++GL + L++ALE + K + + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRR 390
Y ++ C + ++DDA+ + + GV ++R Y+I++ L + + +A +FR+
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 391 MSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
M+ E G P TY+I++R ++ + ++M++ G + ++I+ L +
Sbjct: 569 MTEE-GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSG 626
Query: 451 KLDAACKYFQQML 463
+LD K F ML
Sbjct: 627 ELD---KSFLDML 636
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 182/395 (46%), Gaps = 14/395 (3%)
Query: 93 VLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-- 148
VLN + +G LA+ E ++ K + +I+ L K +NL +M+
Sbjct: 234 VLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 149 --QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+ ++T +T + + + M K + P V F+ L+D K +
Sbjct: 293 GFKADIITYNTLIGGFCNAG---RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+A +L +M RG+ P+ +Y L++G+ ++ L ++ M + +PD++T+ IL
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN YCKA + D+ + + EM + ++ + ++TL+ G +L+ A + +++ +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
P+ +Y ++ C + ++ A + ++++ + + Y II+H + A +A+
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
+F + + G + Y+I++ C ++ L ++ +M G P + +LI A
Sbjct: 530 LFCSLPLK-GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ A + ++M G PA++ ST+K +
Sbjct: 589 LGDDDATTAAELIEEMKSSGF--PADV-STVKMVI 620
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 36/246 (14%)
Query: 275 KYDEAVGFYH-----------------------------------EMQEKNMMPSPHIFS 299
K D+AV + +M+ K + S + S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
+IN ++L A K G+ P+T +N ++ C R+ +A +VD M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
G P T + +++ L +A + RM E G +P TY +L + C + +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
M + +M R I + ++I LC LD A F +M G + ++TL
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 480 ALIDAG 485
+AG
Sbjct: 307 GFCNAG 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
D+A++ + + P +N + A + + + + +M+ G+ + T I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
++ + R A+S ++ ++G EP ++ +L C E R+ + + D+M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIM-KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
P + L++ LC K+ A +M++ G +P + + + +G A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 492 HFALKIDK 499
K+++
Sbjct: 249 ELLRKMEE 256
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 230/481 (47%), Gaps = 34/481 (7%)
Query: 8 KRFFNLFSS-NLPLSKPYPASLTPLSTSPTIKLPQNLSGSL---------RIHTLIPHTP 57
+R F+ FS NL + + L + I L +++ S R+ + I T
Sbjct: 43 ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK 102
Query: 58 HADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQK-G 116
D + + + I L LS+ ++N L L+F + K G
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSI---------MINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 117 FKHSTESFHALIEAL---GKIRQ-FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
++ +T +F LI L G++ + +++ +VE + L+T +T K
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG---KEA 210
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ +KM +YG +P + +++V+CKS A EL KM R + D Y+I++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G + +L + EM+ + +++TY ILI +C A ++D+ +M ++ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ FS LI+ + +L EA E +++ G AP+T TY +++ +C +D A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
VD M G PN RT++I+++ KA + +FR+MS TV TY+ +++ FC
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFC 449
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM------LDVG 466
+ +L++ ++ +M +R + P + + +L+ LC + + A + F+++ LD+G
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 467 I 467
I
Sbjct: 510 I 510
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 10/367 (2%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKME 182
F L A+ K +Q+ ++ L + M+ + + T K+ A K+
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW----SQQ 238
K G +P F+ L++ LC V +A EL D+M G PDL + L+ G +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ +L ++++ E C +P+ VTYG ++N CK+ + A+ +M+E+N+ +
Sbjct: 211 EAMLLIDKMV-EYGC---QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
S +I+GL LD A + + + G TYN ++G +C + R DD +++ +M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
+ PN T+ +++ +K +EA + + M G P TY ++ FC E LD
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLD 385
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+ D M ++G P + F +LI+ C AN++D + F++M G+ ++TL
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 479 QALIDAG 485
Q + G
Sbjct: 446 QGFCELG 452
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 38/356 (10%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E KME+ +K + ++ ++D LCK S++ A LF++M +G+ ++ +Y IL+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 234 G------WSQQQNLLR-----------------------------VNEVCREMKCECFEP 258
G W LLR E+ +EM P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D +TY LI+ +CK D+A M K P+ F+ LING R+D+ LE +
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
K G +T TYN ++ +C +++ A + EM V PN TY I+L L
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 379 RTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
+++A +F ++ S+M E + Y+II+ C+ ++D ++ + +G+ PG+
Sbjct: 487 GESEKALEIFEKIEKSKM--ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ ++I LC L A F++M + G P ++ L +A + G T ++
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 187/402 (46%), Gaps = 9/402 (2%)
Query: 93 VLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
VLN + +G LA+ E ++ K + +I+ L K +NL +M+ +
Sbjct: 234 VLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 151 KLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
+ T T + + + M K + P V F+ L+D K + +A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+EL +M HRG+ PD +YT L++G+ ++ +L + N++ M + +P++ T+ ILIN
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
YCKA + D+ + + +M + ++ ++TLI G +L+ A E +++ + P
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
TY ++ C + + A + +++++ + + Y+II+H + A +A+ +F
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
+ + G +P V TY+I++ C + L ++ +M G P + +LI A H
Sbjct: 533 SLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA--HL 589
Query: 450 NKLDA--ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
DA + K +++ G A+ + L D ++ +
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKS 631
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 13/318 (4%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
LVD+ + A +LF M H +P + ++ L ++ + V +C++M+ +
Sbjct: 64 LVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
++ T I+IN +C+ +K A ++ + P+ FSTLINGL + R+ EAL
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
E ++ G P+ T N +V C S + +A ++D+M + G PN+ TY +L+ +
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K+ T A + R+M E + Y II+ C LD ++++M +GI
Sbjct: 239 CKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG-------MET 488
+ + +LI C+A + D K + M+ I P FS L + + G +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 489 TAIHFALKIDKLRKTPLV 506
IH + D + T L+
Sbjct: 358 EMIHRGIAPDTITYTSLI 375
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A++ F M P V DF++L + K+K + L +M +G+ +L + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + + + L ++ +EP+ +T+ LIN C + EA+ M E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P +TL+NGL + EA+ +K G P TY V+ C S + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +M++ + ++ Y II+ L K + A+++F M + G + TY+I++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIG 306
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC+ R D + M R I P + F VLI + KL A + ++M+ GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 470 PANLFSTL 477
+++L
Sbjct: 367 DTITYTSL 374
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 22/429 (5%)
Query: 46 SLRIHTLIPHTPHA--DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVL 103
+L +H +I H + +KI +IL K ++++ ELV EV+N+ +
Sbjct: 78 ALDVHNIIKHHRGSSPEKIKRILDKC------------GIDLTEELVLEVVNRNRSDWKP 125
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXX 162
A KQ S+ ++ +++ LGK+R+F+ + ++M +R + T
Sbjct: 126 AYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLL 185
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
KV EAV FE+ +++G+ ++ F+ L+ LC+ K VE A+ LF R R
Sbjct: 186 NRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFG 244
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
D+K+ ++L GW N+ +++ PDVV+YG +INA K K +A+
Sbjct: 245 CDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
Y M + P I + +I+ L KR+ EALE + + G P TYN+++ C
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 343 SMRMDDAYRVVDEMKQCG--VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
R + + +V+EM+ G PN T+ +L + ++ +++ V RM+ CE T
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY---SQRSKDVDIVLERMAKN-KCEMT 420
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
Y+++ RL+ ++ + +W +M G+ P + + I L K+ A YFQ
Sbjct: 421 SDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 461 QMLDVGIRP 469
+M+ G+ P
Sbjct: 481 EMMSKGMVP 489
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 175/341 (51%), Gaps = 15/341 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +AV +KM + G KP++ +N ++D LCK+K V A + F ++ +G+ P++ +YT
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 230 ILLEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
L+ G WS LL +M + P+V+TY L++A+ K K EA +
Sbjct: 230 ALVNGLCNSSRWSDAARLL------SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
EM ++ P +S+LINGL R+DEA + ++ + G + +YN ++ +C +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
R++D ++ EM Q G+ N+ TY+ ++ +A +A F +M G P + T
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWT 402
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
Y+I+L CD L+ + +++ M+ R + + + +I +C K++ A F +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 464 DVGIRPPANLFSTLKQALIDAGM--ETTAIHFALKIDKLRK 502
G++P ++T+ L G+ E A++ +K + L K
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 44/340 (12%)
Query: 71 NSTIDA-ALADLSVEVS--PELVA--EVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTES 123
N DA +L D VE+ P++VA +++ L + A FF E+ KG + + +
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVT 227
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKME 182
+ AL+ L ++ L+ DM ++K+ T KV EA E FE+M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 183 KYGLKPE-----------------------------------VSDFNKLVDVLCKSKSVE 207
+ + P+ V +N L++ CK+K VE
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILI 267
+LF +M RGLV + +Y L++G+ Q ++ + E +M PD+ TY IL+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 268 NAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
C + ++A+ + +MQ++ M ++T+I G+ +++EA + G
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
P+ TY ++ C + + + +MKQ G+ N T
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K ++A+ + +M + PS F+ L++ + K+ D + +K + G + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
V+ +C ++ A ++ +M + G P+ T +++ + +A S+ +M E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-VE 183
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
+G +P + Y+ I+ C +R++ + ++ +GI P + + L++ LC++++
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
A + M+ I P +S L A + G
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
D +L++A++ + + P +N ++ A + D + +M+ G+ + T
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
++I+++ A S+ +M ++G EP T ++ FC R+ +++ D+M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKML-KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
G P + + +I +LC +++ A +F+++ GIRP ++ L L ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 488 TTAIHFALKIDKLRKTPLV 506
+ A + K + TP V
Sbjct: 242 SDAARLLSDMIKKKITPNV 260
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 177/350 (50%), Gaps = 6/350 (1%)
Query: 116 GFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
G++ T +F L+ G++ + + + + +MKQR L T +V
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV--TVSTLINGLCLKGRVS 192
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ ++M +YG +P+ + +++ LCKS + A +LF KM R + + Y+I++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + + + EM+ + + DVVTY LI C K+D+ EM +N++
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P FS LI+ + +L EA E Y + G AP+T TYN+++ +C + +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
D M G P+ TY I+++ KA+ + +FR +SS+ G P TY+ ++ FC
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFC 431
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+L+ ++ +M +RG+ P + + +L+ LC +L+ A + F++M
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 197/392 (50%), Gaps = 8/392 (2%)
Query: 93 VLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
VLN+L +G LAL F E ++ K S + +I++L K F +L +M+ +
Sbjct: 216 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 151 KLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
+ T K + + +M + P+V F+ L+DV K + +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+EL+++M RG+ PD +Y L++G+ ++ L N++ M + EPD+VTY ILIN+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
YCKAK+ D+ + + E+ K ++P+ ++TL+ G +L+ A E +++ + G P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
TY ++ C + ++ A + ++M++ + Y+II+H + A +A+S+F
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
+S + G +P V TY++++ C + L ++ +M+ G P + +LI A
Sbjct: 515 SLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 450 NKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ L ++ + ++M G + ST+K +
Sbjct: 574 SGLISSVELIEEMKVCGFSADS---STIKMVI 602
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 171/334 (51%), Gaps = 1/334 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EAV ++M + +P++ + L++ LC V +A L D+M G PD +Y
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L + N ++ R+M+ + VV Y I+I++ CK +D+A+ ++EM+ K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ +S+LI GL +D + D+ + + P+ T++A++ + ++ +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +EM G+ P++ TY+ ++ K EA +F M S+ GCEP + TY I++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILIN 393
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C +R+D M ++ ++ ++G++P + L+ C + KL+AA + FQ+M+ G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKT 503
+ L L D G A+ K+ K R T
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 5/325 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +A++ FE M + P DFN+L + ++K + M G+ D+ + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + +++ LL V +EPD +T+ L+N +C + EAV M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P STLINGL R+ EAL ++ GF P+ TY V+ C S A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +M++ + + Y I++ L K + +A S+F M + G + V TY ++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIG 288
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C++ + D + +M R I+P + F LI KL A + + +M+ GI P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 470 PANLFSTLKQALIDAGMETTAIHFA 494
+++ LID + +H A
Sbjct: 349 DTITYNS----LIDGFCKENCLHEA 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 42/228 (18%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K ++A+ + M + +P+P F+ L + + K+ D L F + + NG + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ YC + + A+SV R + +
Sbjct: 110 IMINCYC-----------------------------------RKKKLLFAFSVLGR-AWK 133
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
+G EP T+ ++ FC E R+ +A+ D+M P + LI+ LC ++
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRK 502
A +M++ G +P + + L +G + AL +D RK
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG------NSALALDLFRK 235
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 192/389 (49%), Gaps = 3/389 (0%)
Query: 83 VEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
V +S LV ++L++ + AL WAE KG KHS++++ ++ LGK +++ +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
VE M+ KL+T +T + +EAV F+++ ++GL+ N L+D LCK
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
K VE+A+ + +++ + P+ ++ I + GW + + +EMK F P V++
Sbjct: 203 EKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y +I YC+ ++ + EM+ P+ ++T+++ L + K +EAL + K
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPNSRTYDIILHHLIKARTT 381
+G P++ YN ++ + R+++A RV EM + GV N+ TY+ ++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILR-LFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
+A + + M S C P V TY +LR F + +++ + + + + +
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRP 469
LI LC AN + A F++M+ I P
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 21/288 (7%)
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
D +CK V + L K+ HR + W +L+ E C+ K
Sbjct: 77 DEICKR--VNLSDGLVHKLLHR-----------FRDDWRSALGILKWAESCKGHK---HS 120
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
D Y + ++ KAKK+D F M+ ++ + + + ++ +EA+
Sbjct: 121 SDA--YDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGI 177
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+++ G T + N ++ C R++ A V+ ++K + PN+ T++I +H K
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCK 236
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A +EA + M G P V +Y I+R +C + + +M A G P
Sbjct: 237 ANRVEEALWTIQEMKGH-GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ ++S+L + + A + +M G +P + ++ L L AG
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 192/389 (49%), Gaps = 3/389 (0%)
Query: 83 VEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
V +S LV ++L++ + AL WAE KG KHS++++ ++ LGK +++ +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
VE M+ KL+T +T + +EAV F+++ ++GL+ N L+D LCK
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
K VE+A+ + +++ + P+ ++ I + GW + + +EMK F P V++
Sbjct: 203 EKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y +I YC+ ++ + EM+ P+ ++T+++ L + K +EAL + K
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPNSRTYDIILHHLIKARTT 381
+G P++ YN ++ + R+++A RV EM + GV N+ TY+ ++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILR-LFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
+A + + M S C P V TY +LR F + +++ + + + + +
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRP 469
LI LC AN + A F++M+ I P
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 21/288 (7%)
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
D +CK V + L K+ HR + W +L+ E C+ K
Sbjct: 77 DEICKR--VNLSDGLVHKLLHR-----------FRDDWRSALGILKWAESCKGHK---HS 120
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
D Y + ++ KAKK+D F M+ ++ + + + ++ +EA+
Sbjct: 121 SDA--YDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGI 177
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+++ G T + N ++ C R++ A V+ ++K + PN+ T++I +H K
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCK 236
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A +EA + M G P V +Y I+R +C + + +M A G P
Sbjct: 237 ANRVEEALWTIQEMKGH-GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ ++S+L + + A + +M G +P + ++ L L AG
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 165/323 (51%), Gaps = 13/323 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +KME+ ++P V +N ++D LC K+V A LF +M ++G+ P++ +Y L+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 234 G------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
WS LL +M P+VVT+ LI+A+ K K EA Y EM
Sbjct: 300 CLCNYGRWSDASRLLS------DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++++ P +S+LING RLDEA +E + P TYN ++ +C + R+D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
+ + EM Q G+ N+ TY ++H +AR A VF++M S+ G P + TY I+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSIL 472
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
L C+ +++ + V++ ++ + P ++ + ++I +C A K++ F + G+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 468 RPPANLFSTLKQALIDAGMETTA 490
+P ++T+ G++ A
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEA 555
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 183/423 (43%), Gaps = 36/423 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A++ F K + F E F L+ A+ K+ +F ++ +L E M+ + T
Sbjct: 65 AVNLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G +P++ N L++ C + A L +M G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD ++ L+ G + + M + +PD+VTYGI++N CK D A+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+M++ + P I++T+I+ L + K +++AL + + G P TYN+++ C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM----------- 391
R DA R++ +M + + PN T+ ++ +K EA ++ M
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 392 -SSEMG----------------------CEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
SS + C P V TY+ +++ FC +R+D M ++ +M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMET 488
RG++ + LI A + D A F+QM+ G+ P +S L L + G
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 489 TAI 491
TA+
Sbjct: 484 TAL 486
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 154/317 (48%), Gaps = 3/317 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V +A+ F +M+ G++P V +N L+ LC A L M R + P++ +++
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++TLI G KR+DE +E + + G T TY ++ + + D+A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIIL 408
V +M GV P+ TY I+L L + A VF + S+M EP + TY+I++
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM--EPDIYTYNIMI 508
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C +++ ++ + +G+ P + + ++S C + A F++M + G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 469 PPANLFSTLKQALIDAG 485
P + ++TL +A + G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV F M K P + +F+KL+ + K + L ++M++ G+ +L +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EPD+VT L+N +C + +AV +M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL R EA+ ++ G P+ TY VV C +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +M+Q + P Y+ I+ L + +A ++F M ++ G P V TY+ ++R
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIR 299
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K + +M+ I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 470 PANLFSTL 477
+S+L
Sbjct: 360 DIFTYSSL 367
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 199/431 (46%), Gaps = 25/431 (5%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV--EVSPELVAE--VLN 95
P + + + IH L H ++ + AL D V P+LV V+N
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAV--------------ALVDRMVVKGCQPDLVTYGIVVN 229
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LALS E+ K + ++ +I+AL + NL +M + +
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 154 TRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P V F+ L+D K + +A++L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LI +C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFC 407
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ DE + + EM ++ ++ + ++TLI+G + D A +++ ++G P+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TY+ ++ C + +++ A V + +++ + P+ TY+I++ + KA ++ + +F +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANK 451
S + G +P V TY ++ FC + + A++ +M+ G LP + LI A
Sbjct: 528 SLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 452 LDAACKYFQQM 462
A+ + ++M
Sbjct: 587 KAASAELIREM 597
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 17/340 (5%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALS--------FFHWAEKQKGFKHSTE 122
N+ IDA +V + L E+ NK V+ + + W++ + E
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 123 --------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+F ALI+A K + L ++M +R + T ++ E
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A FE M P V +N L+ CK+K V++ ELF +M RGLV + +YT L+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q + V ++M + PD++TY IL++ C K + A+ + +Q M P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ +I G+ ++++ + + G P TY ++ +C ++A +
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
EMK+ G P+S TY+ ++ ++ + + R M S
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 206 VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
++ A LF M P + ++ LL ++ V + +M+ ++ TY I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
LIN +C+ + A+ +M + P ++L+NG R+ +A+ + G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
+ P++ T+N ++ R +A +VD M G P+ TY I+++ L K A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 386 SVFRRMSSEMG-CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
S+ ++M E G EP V Y+ I+ C+ + ++ + ++ +M +GI P + + LI
Sbjct: 242 SLLKKM--EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
LC+ + A + M++ I P FS L A + G
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V E +E F +M + GL + L+ +++ + AQ +F +M G++PD+ +Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + V ++ EPD+ TY I+I CKA K ++ + + K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++T+++G +EA + + K G P++ TYN ++ A+ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
++ EM+ C ++ T ++ + L R
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNMLHDGR 620
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K D+AV + +M + PS FS L++ + + D + E+ + G + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ +C ++ A V+ +M + G P+ T + +L+ +A S+ +M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV-E 179
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
MG +P T++ ++ R +A+ D+M +G P + + ++++ LC +D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
A ++M I P +++T+ AL + A++ ++D
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+++DDA + +M + P+ + +L + K S+ +M + +G + T
Sbjct: 60 LKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LGISHNLYT 118
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
Y I++ FC +L + +AV +M G P + L++ CH N++ A QM+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 464 DVGIRPPANLFSTLKQALIDAGMETTAI 491
++G +P + F+TL L + A+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+D +LD+A+ + + P ++ ++ A + D + ++M+ G+ N
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 367 TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
TY I+++ + A +V +M ++G EP + T + +L FC R+ +++ Q
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 427 MRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
M G P F LI L N+ A +M+ G +P + + L G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 487 ETTAIHFALKIDKLRKTPLVA 507
A+ K+++ + P V
Sbjct: 237 IDLALSLLKKMEQGKIEPGVV 257
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 179/389 (46%), Gaps = 2/389 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A+ F K + F E F L+ A+ K+ +F ++ +L E M+ + T
Sbjct: 59 AIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G P + N L++ C + +A L D+M G
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD ++T L+ G Q + M + +PD+VTYG +IN CK + D A+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M++ + I++T+I+GL K +D+A + + K + G P+ TYN ++ C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
R DA R++ +M + + P+ ++ ++ +K EA ++ M C P V
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
Y+ +++ FC +R++ M V+ +M RG++ + LI A D A F+QM
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 463 LDVGIRPPANLFSTLKQALIDAGMETTAI 491
+ G+ P ++ L L + G TA+
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 165/332 (49%), Gaps = 4/332 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EAV E+M G +P++ + +++ LCK + A L +KM + D+ Y
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G + +++ ++ +M+ + +PDV TY LI+ C ++ +A +M EK
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFY-EKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
N+ P F+ LI+ + +L EA + Y E K+ P+ YN ++ +C R+++
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
V EM Q G+ N+ TY ++H +AR A VF++M S+ G P + TY+I+L
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILL 433
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C+ ++ + V++ M+ R + + + +I ALC A K++ F + G++
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 469 PPANLFSTLKQALIDAGM--ETTAIHFALKID 498
P ++T+ G+ E A+ +K D
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 178/378 (47%), Gaps = 5/378 (1%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKE 173
KG + ++ A+I L K + + NL+ M++ K+ K + +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F KME G+KP+V +N L+ LC A L M + + PDL + L++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 234 GWSQQQNLLRVNEVCREM--KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ ++ L+ ++ EM CF PDVV Y LI +CK K+ +E + + EM ++ +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + ++TLI+G + D A +++ ++G P+ TYN ++ C + ++ A
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
V + M++ + + TY ++ L KA ++ + +F +S + G +P V TY ++ F
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGF 506
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C + + A++ +M+ G LP + LI A A+ + ++M G A
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 472 NLFSTLKQALIDAGMETT 489
+ F + L D ++ +
Sbjct: 567 STFGLVTNMLHDGRLDKS 584
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 14/324 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KMEK ++ +V +N ++D LCK K ++ A +LF+KM +G+ PD+ +Y L+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 234 G------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM- 286
WS LL +M + PD+V + LI+A+ K K EA Y EM
Sbjct: 294 CLCNYGRWSDASRLLS------DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ K+ P ++TLI G KR++E +E + + G T TY ++ + +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
D+A V +M GV P+ TY+I+L L + A VF M + + TY
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTT 466
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ C +++ ++ + +G+ P + + ++S C + A F +M + G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 467 IRPPANLFSTLKQALIDAGMETTA 490
P + ++TL +A + G E +
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAAS 550
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +F+KL+ + K + L ++M++ G+ +L +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L + +M + P +VT L+N +C + EAV +M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TL++GL + EA+ E+ G P+ TY AV+ C D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M++ + + Y+ I+ L K + +A+ +F +M ++ G +P V TY+ ++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLIS 293
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
C+ R + M + I P + F LI A KL A K + +M+
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 177/409 (43%), Gaps = 34/409 (8%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKIC---KILSKS--PN-STIDAALADLSVEVSPELVAEV 93
P ++ + +H L H ++ + +++ K P+ T A + L P+L +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 94 LNKLSNAGVLA---------------------LSFFHWAEKQKGFKHSTESFHALIEALG 132
LNK+ + A F+ E KG K +++ LI L
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME-TKGIKPDVFTYNPLISCLC 296
Query: 133 KIRQFKVIWNLVEDMKQRKLLTRDTX--XXXXXXXXXXXKVKEAVETFEKMEKYG-LKPE 189
++ L+ DM ++ + D K+ EA + +++M K P+
Sbjct: 297 NYGRWSDASRLLSDMLEKNI-NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V +N L+ CK K VE+ E+F +M RGLV + +YT L+ G+ Q ++ V +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
+M + PD++TY IL++ C + A+ + MQ+++M ++T+I L
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
++++ + + G P TY ++ +C ++A + EMK+ G PNS TY+
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
++ ++ + + + M S G ST+ ++ + D RLD
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRS-CGFAGDASTFGLVTNMLHD-GRLD 582
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
D +LD+A+ + + P ++ ++ A + D + ++M+ G+ N T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y I +++ + A ++ +M ++G P++ T + +L FC R+ +A+ DQM
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
G P F L+ L NK A ++M+ G +P + + L G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 488 TTAIHFALKIDK 499
A++ K++K
Sbjct: 232 DLALNLLNKMEK 243
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 197/402 (49%), Gaps = 22/402 (5%)
Query: 87 PELV--AEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
P +V ++VL+K++ + L +S FH E G H S++ +I L + +F + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 143 LVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
+V M + T +V +A++ KME+ G +P+V +N ++D C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG------WSQQQNLLRVNEVCREMKCEC 255
K V A ELFD+M G+ D +Y L+ G WS L+R + V R++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR-DMVMRDIV--- 241
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
P+V+T+ +I+ + K K+ EA+ Y EM + + P +++LINGL R+DEA
Sbjct: 242 --PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ + G P+ TYN ++ +C S R+D+ ++ EM Q G+ ++ TY+ I+
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+A A +F RM S P + TY I+L C R++ + +++ M+ I
Sbjct: 360 FQAGRPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ + ++I +C ++ A F+ + G++P ++T+
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 161/329 (48%), Gaps = 1/329 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++E ++ F KM + P + DF+K++ + KSK+ + LF M G+ DL SY
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + + V +M +EPDVVT LIN +C+ + +A+ +M+E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P I++T+I+G +++A+E +++ + +G + TYN++V C S R DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R++ +M + PN T+ ++ +K EA ++ M+ +P V TY+ ++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLIN 287
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C R+D + D M +G LP + + LI+ C + ++D K F++M G+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKID 498
++T+ Q AG A ++D
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 140/292 (47%), Gaps = 5/292 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXX 162
A+ F E+ G + ++++L+ L ++ L+ DM R ++ T
Sbjct: 193 AVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K EA++ +E+M + + P+V +N L++ LC V++A+++ D M +G +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ +Y L+ G+ + + + ++ REM D +TY +I Y +A + D A
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ M + P+ +S L+ GL + R+++AL +E + + + TYN V+ C
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++DA+ + + G+ P+ +Y ++ + R ++ ++R+M +
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
S L+E ++ + K + P ++ V+ S D + M+ CG+G +
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 367 TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
+Y+I+++ L + A SV +M + G EP V T ++ FC R+ + + +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKM-MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 427 MRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
M G P + ++ +I C ++ A + F +M G+R A +++L L +G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 487 ETTA 490
+ A
Sbjct: 225 WSDA 228
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 1/324 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+K+A+E ++M + P+V + L++ C+ V A +L D+MR RG PD+ +Y
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G ++ L + +M +P+V+T+ I++ + C ++ +A +M K
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
PS F+ LIN L L A++ EK +G P + +YN ++ +C +MD A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ M G P+ TY+ +L L K ++A + ++SS+ GC P + TY+ ++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVID 457
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ + + D+MRA+ + P + L+ L K+D A K+F + +GIRP
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 470 PANLFSTLKQALIDAGMETTAIHF 493
A F+++ L + AI F
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDF 541
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 1/335 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K E +++ + P+V +N ++ LC S +++A E+ D+M R PD+ +YT
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+E + + ++ EM+ PDVVTY +L+N CK + DEA+ F ++M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ + ++ + S R +A + GF+P T+N ++ C + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M Q G PNS +Y+ +LH K + A RM S GC P + TY+ +L
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLT 422
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C + +++ + + +Q+ ++G P + + +I L A K A K +M ++P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+S+L L G AI F + +++ P
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 176/369 (47%), Gaps = 38/369 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++E + E M +G P++ L+ C+ KA ++ + + G VPD+ +Y
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 230 ILLEGWSQQ---QNLLRV-----------------NEVC-------------REMKCECF 256
+++ G+ + N L V +C R ++ +C+
Sbjct: 177 VMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
PDV+TY ILI A C+ A+ EM+++ P ++ L+NG+ + RLDEA++
Sbjct: 237 -PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
F ++G P T+N ++ + C + R DA +++ +M + G P+ T++I+++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
+ A + +M + GC+P +Y+ +L FC E+++D + ++M +RG P +
Sbjct: 356 RKGLLGRAIDILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALK 496
+ +++ALC K++ A + Q+ G P ++T+ L AG AI
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL--- 471
Query: 497 IDKLRKTPL 505
+D++R L
Sbjct: 472 LDEMRAKDL 480
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 135/261 (51%), Gaps = 1/261 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A + M + G P V FN L++ LC+ + +A ++ +KM G P+ SY LL
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ +++ + R E M PD+VTY ++ A CK K ++AV +++ K
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++T+I+GL + +A++ ++ +A P+T TY+++VG ++D+A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
E ++ G+ PN+ T++ I+ L K+R T A M + GC+P ++Y I++
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLA 565
Query: 413 DEERLDMEMAVWDQMRARGIL 433
E + + +++ +G++
Sbjct: 566 YEGMAKEALELLNELCNKGLM 586
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 6/271 (2%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+ ++ +E+ + + M + G VPD+ T L+ G+ + + ++ ++ PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
V+TY ++I+ YCKA + + A+ M ++ P ++T++ L +L +A+E +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+ P+ TY ++ A C + A +++DEM+ G P+ TY+++++ + K
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER-LDMEMAVWDQMRARGILPGMHV 438
EA M S GC+P V T++IILR C R +D E + D +R +G P +
Sbjct: 289 RLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVT 346
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRP 469
F +LI+ LC L A ++M G +P
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
+KGF S +F+ LI L + +++E M Q + K+
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+E E+M G P++ +N ++ LCK VE A E+ +++ +G P L +Y ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G ++ + ++ EM+ + +PD +TY L+ + K DEA+ F+HE + +
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ F++++ GL ++ D A++F G P +Y ++ + +A +
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 353 VDEMKQCGV 361
++E+ G+
Sbjct: 577 LNELCNKGL 585
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 166/327 (50%), Gaps = 4/327 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA+ +M + G+KP+V + ++D LCK+ V A LFD+M + G+ PD+ YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + + R M +PDV+T+ LI+A+ K K+ +A Y+EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P+ +++LING + +DEA + + + G P+ Y +++ +C ++DDA
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM Q G+ N+ TY ++ + A VF M S G P + TY+++L
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLH 395
Query: 410 LFCDEERLDMEMAVWDQMRAR---GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
C ++ + +++ M+ R G+ P + + VL+ LC+ KL+ A F+ M
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 467 IRPPANLFSTLKQALIDAGMETTAIHF 493
+ ++ + Q + AG A++
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNL 482
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA++ F M + P + DF KL++V+ K K + L D ++ G+ DL +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + Q + +M FEPD+VT+ LIN +C + +EA+ ++M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P +++T+I+ L + ++ AL +++ + G P+ Y ++V C S R DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ M + + P+ T++ ++ +K +A ++ M M P + TY ++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-IRMSIAPNIFTYTSLIN 290
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC E +D ++ M +G P + + LI+ C K+D A K F +M G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 470 PANLFSTLKQALIDAGMETTA 490
++TL Q G A
Sbjct: 351 NTITYTTLIQGFGQVGKPNVA 371
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 39/322 (12%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A M K +KP+V FN L+D K A+EL+++M + P++ +YT L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G+ + + ++ M+ + PDVV Y LIN +CK KK D+A+ ++EM +K +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ ++TLI G G + + A E + + G P TYN ++ C++ ++ A
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 352 VVDEMKQC---GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+ ++M++ GV PN TY+++LH L
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGL--------------------------------- 435
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C +L+ + V++ MR R + G+ + ++I +C A K+ A F + G++
Sbjct: 436 ---CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 469 PPANLFSTLKQALIDAGMETTA 490
P ++T+ L G++ A
Sbjct: 493 PNVVTYTTMISGLFREGLKHEA 514
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K + + ++ G+ ++ N L++ C+S A KM G PD+ ++T
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + +M +PDVV Y +I++ CK + A+ + +M+
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++++L+NGL + R +A P+ T+NA++ A+ + DA
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +EM + + PN TY +++ EA +F M ++ GC P V Y ++
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLIN 325
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +++D M ++ +M +G+ + LI K + A + F M+ G+ P
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 470 PANLFSTLKQALIDAG 485
++ L L G
Sbjct: 386 NIRTYNVLLHCLCYNG 401
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 163/355 (45%), Gaps = 19/355 (5%)
Query: 52 LIPHTPHADKICKILSKSPNSTIDAALADL----SVEVSPELV--AEVLNKLSNAGVL-- 103
++ +T D +CK N ++ AL+ + + P++V ++N L N+G
Sbjct: 177 VVMYTTIIDSLCK------NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXX 162
A S K+K K +F+ALI+A K +F L +M + + T
Sbjct: 231 ADSLLRGMTKRK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
V EA + F ME G P+V + L++ CK K V+ A ++F +M +GL
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ +YT L++G+ Q EV M P++ TY +L++ C K +A+
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 283 YHEMQEKNM---MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ +MQ++ M P+ ++ L++GL + +L++AL +E + TY ++
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
C + ++ +A + + GV PN TY ++ L + EA+ +FR+M +
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXX 162
A F+ E KG ++ +LI K ++ + +M Q+ L T
Sbjct: 301 ARQMFYLME-TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR--- 219
K A E F M G+ P + +N L+ LC + V+KA +F+ M+ R
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ P++ +Y +LL G L + V +M+ + ++TY I+I CKA K A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
V + + K + P+ ++T+I+GL + EA + K K +G +
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 182/384 (47%), Gaps = 14/384 (3%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ G++ T +F LI L + LV+ M QR T +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A KME ++ V ++ ++D LCK + + A LF +M ++G+ P++ +Y+ L+
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 233 ------EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
E WS LL +M P+VVT+ LI+A+ K K EA Y EM
Sbjct: 303 SCLCNYERWSDASRLLS------DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
++++ P +S+LING RLDEA +E + P TYN ++ +C + R+
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
D+ + EM Q G+ N+ TY ++H +AR A VF++M S+ G P + TY+
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNT 475
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+L C +L+ M V++ ++ + P ++ + ++I +C A K++ F + G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 467 IRPPANLFSTLKQALIDAGMETTA 490
++P +++T+ G++ A
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEA 559
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 172/361 (47%), Gaps = 4/361 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
Q+G + + ++ ++ L K + +NL+ M+ K+ + ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 174 -AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ F +ME G++P V ++ L+ LC + A L M R + P++ ++ L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TLING KR+DE +E + + G T TY ++ + + D+A V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLF 411
+M GV PN TY+ +L L K ++A VF + S+M EPT+ TY+I++
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYNIMIEGM 515
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C +++ ++ + +G+ P + ++ +IS C + A F++M + G P +
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 472 N 472
Sbjct: 576 G 576
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G +P+ F L+ L +A L D+M RG P+L +Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G ++ ++ + +M+ E +VV Y +I++ CK + D+A+ + EM+ K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L + +R +A P T+NA++ A+ ++ +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ DEM + + P+ TY +++ EA +F M S+ C P V TY+ ++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIN 408
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R+D + ++ +M RG++ + LI A D A F+QM+ G+ P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 470 PANLFSTLKQALIDAG 485
++TL L G
Sbjct: 469 NIMTYNTLLDGLCKNG 484
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +FNKL+ + K K + L +KM+ G+ +L +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + + +M +EP +VT L+N YC K+ +AV +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P TY VV C +D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ ++++M+ + N Y ++ L K R +A ++F M ++ G P V TY ++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLIS 303
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ ER + M R I P + F LI A KL A K + +M+ I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 470 PANLFSTL 477
+S+L
Sbjct: 364 DIFTYSSL 371
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 160/332 (48%), Gaps = 38/332 (11%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
AL+ F E KG + + ++ +LI L ++ L+ DM +RK
Sbjct: 279 ALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK------------ 325
Query: 164 XXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP 223
+ P V FN L+D K + +A++L+D+M R + P
Sbjct: 326 ----------------------INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGF 282
D+ +Y+ L+ G+ L + M +CF P+VVTY LIN +CKAK+ DE V
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ EM ++ ++ + ++TLI+G + D A +++ ++G P TYN ++ C
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ +++ A V + +++ + P TY+I++ + KA ++ + +F +S + G +P V
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVI 541
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
Y+ ++ FC + + A++ +MR G LP
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F+ALI+A K + L ++M +R + T ++ EA FE M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P V +N L++ CK+K +++ ELF +M RGLV + +YT L+ G+ Q ++
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V ++M + P+++TY L++ CK K ++A+ + +Q M P+ + ++ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I G+ ++++ + + G P+ YN ++ +C ++A + +M++ G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 362 GPNSRT 367
P+S T
Sbjct: 572 LPDSGT 577
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K D+A+G + M + +PS F+ L++ + K+ D + EK + G + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ +C ++ A ++ +M + G P+ T +L+ + +A ++ +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-E 183
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
MG P T+ ++ + +A+ D+M RG P + + V+++ LC +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
A +M I ++ST+ +L E A++
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L NGL S K LD+A+ + + P +N ++ A + D + ++M++ G
Sbjct: 57 LRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ N TY+I+++ + A ++ +M ++G EP++ T +L +C +R+
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+A+ DQM G P F LI L NK A +M+ G +P + +
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 481 LIDAG 485
L G
Sbjct: 235 LCKRG 239
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 186/395 (47%), Gaps = 11/395 (2%)
Query: 113 KQKGFKHSTESFHALIEAL---GKIR-QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXX 168
+ K F T +++ +I +L GK+ KV+ L+ D Q ++T
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT---YTILIEATMLE 241
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
V EA++ ++M GLKP++ +N ++ +CK V++A E+ + +G PD+ SY
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
ILL Q ++ +M E +P+VVTY ILI C+ K +EA+ M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K + P + + LI + RLD A+EF E ++G P+ YN V+ C + + D
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + ++ + G PNS +Y+ + L + A + M S G +P TY+ ++
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMI 480
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C E +D + MR+ P + + +++ C A++++ A + M+ G R
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 469 PPANLFSTLKQALIDAGMETTAIHFA---LKIDKL 500
P ++ L + + AG A+ A ++ID +
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 166/328 (50%), Gaps = 2/328 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +AV E +EK+G +P+V +N L++ CK ++ A + D+MR + PD +Y
Sbjct: 139 NIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + L +V ++ + +P V+TY ILI A DEA+ EM +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++T+I G+ + +D A E + G P+ +YN ++ A + ++
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+++ +M PN TY I++ L + +EA ++ + M E G P +YD ++
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM-KEKGLTPDAYSYDPLIA 376
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC E RLD+ + + M + G LP + + +++ LC K D A + F ++ +VG P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKI 497
++ ++T+ AL +G + A+H L++
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEM 464
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 161/332 (48%), Gaps = 2/332 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E++ E M + G P+V KL+ +++ KA + + + G PD+ +Y L+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ + + V M+ + F PD VTY I+I + C K D A+ +++ N
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ LI + +DEAL+ ++ + G P+ TYN ++ C +D A+ +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
V ++ G P+ +Y+I+L L+ +E + +M SE C+P V TY I++ C
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLC 344
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ +++ M + M+ +G+ P + + LI+A C +LD A ++ + M+ G P
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 473 LFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
++T+ L G A+ K+ ++ +P
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 7/324 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A+ F++M G KP V +N ++D LCKSK V+ A +L ++M G+ PD+ +Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC---FEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L+ G R ++ R + C PDV T+ LI+A K + EA FY EM
Sbjct: 226 SLISGLCSSG---RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+++ P +S LI GL RLDEA E + + G P+ TY+ ++ YC S ++
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
+ ++ EM Q GV N+ TY I++ +A A +FRRM G P + TY++
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNV 401
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+L CD +++ + + M+ G+ + + ++I +C A ++ A + + G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 467 IRPPANLFSTLKQALIDAGMETTA 490
+ P ++T+ L G+ A
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREA 485
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ ++++ F M + P ++DF++L+ + K +K Y
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK----------------------MKKYD 98
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ W Q Q L + +C T IL+N +C+ + A+ F +M +
Sbjct: 99 VVIYLWEQMQMLGIPHNLC-------------TCNILLNCFCRCSQLSLALSFLGKMIKL 145
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
PS F +L+NG R+ +AL +++ G+ P YN ++ C S ++D+A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG---CEPTVSTYDI 406
+++ M++ G+GP+ TY+ LI + +S RM S M P V T++
Sbjct: 206 LDLLNRMEKDGIGPDVVTYN----SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ E R+ +++M R + P + + +LI LC ++LD A + F M+ G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 467 IRPPANLFSTL 477
P +S L
Sbjct: 322 CFPDVVTYSIL 332
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K D+++ + M + +PS FS L++ + K+ D + +E+ + G T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ +C ++ A + +M + G P+ T+ +L+ + +A +F +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG- 179
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
MG +P V Y+ I+ C +++D + + ++M GI P + + LIS LC + +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
A + M I P F+ L A + G + A F
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 17/241 (7%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHW----------AEKQKGFKHS 120
N+ IDA + + V + E E++ + + ++ S + AE+ GF S
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 121 TESF------HALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
F LI K ++ + L +M QR ++ T K+
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M G+ P + +N L+ LC + +EKA + M+ G+ D+ +Y I++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + ++ + C+ PD+ TY ++ K EA + +M+E ++P
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Query: 294 S 294
+
Sbjct: 500 N 500
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 7/377 (1%)
Query: 93 VLNKLSNAGVL--ALSFFHW---AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM 147
VLN + N G+ L F+ + + + SF+ +I+AL K+R + M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 148 KQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+RK L T ++ EAV ++M+ G P +N L+D LCK +
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+ +L D M +G VP+ +Y L+ G + L + + M P+ VTYG L
Sbjct: 274 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN K ++ +AV M+E+ + HI+S LI+GL + + +EA+ + K G
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
P Y+ +V C + ++A +++ M G PN+ TY ++ K +EA
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
V++ M + GC Y +++ C R+ M VW +M GI P + +I L
Sbjct: 454 VWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 447 CHANKLDAACKYFQQML 463
C +DAA K + +ML
Sbjct: 513 CGIGSMDAALKLYHEML 529
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 1/323 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A+E F M + P+ + L+D LCK + +++A L D+M+ G P Y +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G ++ +L RV ++ M + P+ VTY LI+ C K D+AV M
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ + TLINGL +R +A+ + G+ Y+ ++ + ++A
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ +M + G PN Y +++ L + EA + RM + GC P TY +++
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKG 441
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F + + VW +M G + VLI LC ++ A + +ML +GI+P
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 471 ANLFSTLKQALIDAGMETTAIHF 493
+S++ + L G A+
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKL 524
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 177/399 (44%), Gaps = 7/399 (1%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-QRKLLTRDTXXXXXXXX 165
F A K FK + ++IE+ F + L+ ++ + +++ +
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 166 XXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM----RHRG 220
+AV+ F +M +++ K V FN +++V+ + E +D + +
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
+ P+ S+ ++++ + + + R EV R M PD TY L++ CK ++ DEAV
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
EMQ + PSP I++ LI+GL L + + G P TYN ++
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
C ++D A +++ M PN TY +++ L+K R +A + M E G
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM-EERGYHLN 361
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
Y +++ E + + M++W +M +G P + V+ VL+ LC K + A +
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 461 QMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
+M+ G P A +S+L + G+ A+ ++DK
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EAV+ +++M+K G ++ L+D LC V++A ++ KM G+ PD +Y+ +
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 232 LEGWSQQQNLLRVNEVCREMKCE---CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++G ++ ++ EM C+ +PDVVTY IL++ C K AV + M +
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 289 KNMMPSPHIFSTLINGLGSD---------------------KRLDEALEFYEKFKANGFA 327
+ P +T +N L +R+ A E A
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLA 628
Query: 328 PETPTYNAVVGAYCWSMRMDDA 349
P+T T+ +V C +++ A
Sbjct: 629 PKTSTWAMIVREICKPKKINAA 650
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 190/375 (50%), Gaps = 13/375 (3%)
Query: 103 LALSFFHWAEKQK-GFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTX 158
L+L+F + K G++ T +F LI L G++ + + + + +M + L T
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI--TL 180
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
KV +AV ++M + G +P + ++ V+CKS A EL KM
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
R + D Y+I+++G + +L + EM+ + F+ D++ Y LI +C A ++D+
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
+M ++ + P FS LI+ + +L EA E +++ G +P+T TY +++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
+C ++D A ++D M G GPN RT++I+++ KA + +FR+MS
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
TV TY+ +++ FC+ +L++ ++ +M +R + P + + +L+ LC + + A +
Sbjct: 421 DTV-TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 459 FQQM------LDVGI 467
F+++ LD+GI
Sbjct: 480 FEKIEKSKMELDIGI 494
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 1/330 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA+E ++M + G KP + N LV+ LC + V A L D+M G P+ +Y
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + E+ R+M+ + D V Y I+I+ CK D A ++EM+ K
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
I++TLI G R D+ + P+ ++A++ + ++ +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EM Q G+ P++ TY ++ K +A + M S+ GC P + T++I++
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILIN 395
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C +D + ++ +M RG++ + LI C KL+ A + FQ+M+ +RP
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDK 499
+ L L D G A+ KI+K
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 5/320 (1%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+++ L G L +F + E + KGFK + LI ++ L+ DM +RK
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 152 LLTRDTXXXXXXXX--XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
+ T D K++EA E ++M + G+ P+ + L+D CK ++KA
Sbjct: 313 I-TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+ D M +G P+++++ IL+ G+ + + E+ R+M D VTY LI
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+C+ K + A + EM + + P + L++GL + ++ALE +EK + + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
YN ++ C + ++DDA+ + + GV P+ +TY+I++ L K + EA +FR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 390 RMSSEMGCEPTVSTYDIILR 409
+M E G P TY+I++R
Sbjct: 552 KM-EEDGHSPNGCTYNILIR 570
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 174/379 (45%), Gaps = 4/379 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
+ GF+ + ++ +++ + K Q + L+ M++RK+ L +
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F +ME G K ++ + L+ C + + +L M R + PD+ +++ L+
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L E+ +EM PD VTY LI+ +CK + D+A M K
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ F+ LING +D+ LE + K G +T TYN ++ +C +++ A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLF 411
EM V P+ +Y I+L L ++A +F ++ S+M E + Y+II+
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM--ELDIGIYNIIIHGM 502
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C+ ++D ++ + +G+ P + + ++I LC L A F++M + G P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 472 NLFSTLKQALIDAGMETTA 490
++ L +A + G T +
Sbjct: 563 CTYNILIRAHLGEGDATKS 581
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +AV+ F++M + +P + DF++L V+ ++K + LV DL
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD-------------LVLDL---- 94
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
C++M+ + ++ T I+IN C+ +K A ++ +
Sbjct: 95 ------------------CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P FSTLINGL + R+ EALE ++ G P T NA+V C + ++ DA
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++D M + G PN TY +L + K+ T A + R+M E + Y II+
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIID 255
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C + LD ++++M +G + ++ LI C+A + D K + M+ I P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 470 PANLFSTLKQALIDAG 485
FS L + G
Sbjct: 316 DVVAFSALIDCFVKEG 331
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 152/314 (48%), Gaps = 5/314 (1%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+ + M K + P+V F+ L+D K + +A+EL +M RG+ PD +YT L+
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ ++ L + N + M + P++ T+ ILIN YCKA D+ + + +M + ++
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++TLI G +L+ A E +++ + P+ +Y ++ C + + A +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+++++ + + Y+II+H + A +A+ +F + + G +P V TY+I++ C
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLC 538
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA--ACKYFQQMLDVGIRPP 470
+ L ++ +M G P + +LI A H + DA + K +++ G
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 471 ANLFSTLKQALIDA 484
A+ + L D
Sbjct: 597 ASTVKMVVDMLSDG 610
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ + +E F KM G+ + +N L+ C+ +E A+ELF +M R + PD+ SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+G + E+ +++ E D+ Y I+I+ C A K D+A + + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++ +I GL L EA + K + +G +P TYN ++ A+ +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
++++E+K+CG ++ T +++ L R
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 97/224 (43%), Gaps = 14/224 (6%)
Query: 296 HIFSTLINGLGS------------DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
+FS++ +G G D + D+A++ +++ + P ++ + +
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+ D + +M+ G+ N T I+++ + R A+S ++ ++G EP T
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVT 144
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ ++ C E R+ + + D+M G P + L++ LC K+ A +M+
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 464 DVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+ G +P + + + + +G A+ K+++ RK L A
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE-RKIKLDA 247
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 233/546 (42%), Gaps = 80/546 (14%)
Query: 2 AFSRSPKRFFNLFSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADK 61
AF K+F + P+++ S++PL + LP+ S S+ + PH +
Sbjct: 19 AFEVLKKKFSTDVTVPSPVTRRQFCSVSPLLRN----LPEEESDSMSV-------PH--R 65
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHST 121
+ ILSK PN +L + +SP V+ + + L AL+F HW + +KHS
Sbjct: 66 LLSILSK-PNWHKSPSLKSMVSAISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSV 123
Query: 122 ESFHALIEAL------GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
S+ +L+ L G + + +++ D L D K K +
Sbjct: 124 YSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLII 183
Query: 176 ETFE----KMEKYGLK----------------PEVSDFNKLVDVLCKSKSVEKAQELFDK 215
+ + ++GL P + +NK+V+ CK +VE+A + K
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM---KC------------------- 253
+ GL PD +YT L+ G+ Q+++L +V EM C
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 254 --------------ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
ECF P V TY +LI + C +++ EA+ EM+E + P+ H ++
Sbjct: 304 IDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
LI+ L S + ++A E + G P TYNA++ YC ++DA VV+ M+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
+ PN+RTY+ ++ K+ +A V +M E P V TY+ ++ C D
Sbjct: 423 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
+ M RG++P + +I +LC + +++ AC F + G+ P +++ L
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 480 ALIDAG 485
AG
Sbjct: 541 GYCKAG 546
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 183/411 (44%), Gaps = 36/411 (8%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
KG + + ++ LI L R+ +L MK + T T + E
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ ++ME+ G+KP + + L+D LC EKA+EL +M +GL+P++ +Y L+
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 234 GWSQ----------------------------------QQNLLRVNEVCREMKCECFEPD 259
G+ + + N+ + V +M PD
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD 461
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
VVTY LI+ C++ +D A M ++ ++P ++++I+ L KR++EA + ++
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+ G P Y A++ YC + ++D+A+ ++++M PNS T++ ++H L
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
+EA + +M ++G +PTVST I++ + D + + QM + G P H +
Sbjct: 582 KLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
I C +L A +M + G+ P +S+L + D G A
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 25/393 (6%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
+KG + +++ALI K + ++VE M+ RKL V +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK 445
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KM + + P+V +N L+D C+S + + A L M RGLVPD +YT +++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 234 GWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + RV E C ++ + P+VV Y LI+ YCKA K DEA +M KN
Sbjct: 506 SLCKSK---RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ F+ LI+GL +D +L EA EK G P T ++ D AY
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+M G P++ TY + + +A + +M E G P + TY +++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKG 681
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS------------------ALCHANKL 452
+ D + + V +MR G P H F LI A+ + +
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 453 DAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
D + ++M++ + P A + L + + G
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 6/280 (2%)
Query: 230 ILLEGWSQQQNLLRVNEVCREM-KCECFEPD----VVTYGILINAYCKAKKYDEAVGFYH 284
++++ + L V ++CR+M K E FE + Y L+N+ + DE Y
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM E + P+ + ++ ++NG ++EA ++ K G P+ TY +++ YC
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+D A++V +EM G N Y ++H L AR EA +F +M + C PTV TY
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVRTY 326
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
++++ C ER + + +M GI P +H + VLI +LC K + A + QML+
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 465 VGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
G+ P ++ L GM A+ ++ + +P
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 146/355 (41%), Gaps = 18/355 (5%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
+QKG + + ALI+ K + ++E M + L T K+
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA EKM K GL+P VS L+ L K + A F +M G PD +YT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ LL ++ +M+ PD+ TY LI Y + + A M++
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
PS H F +LI L LE + K G PE + A M D
Sbjct: 704 EPSQHTFLSLIKHL---------LEM-KYGKQKGSEPE-------LCAMSNMMEFDTVVE 746
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++++M + V PN+++Y+ ++ + + + A VF M G P+ ++ +L
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
C ++ + V D M G LP + VLI L + + FQ +L G
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
++ G ++ +LI+ G + Q +++++ M RDT +K
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-------RDTGCEPSQHTFLSL-IK 715
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+E +K G +PE+ + +++ + EL +KM + P+ KSY L+
Sbjct: 716 HLLEMKYGKQK-GSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 233 EGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G + NL +V M + E P + + L++ CK KK++EA +M
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P LI GL + ++ G+ + + ++ ++ Y
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
+ + M++ G +S+TY +++
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLI 908
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 202/416 (48%), Gaps = 2/416 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++N + L LS ++ E GF + F+ L+ + F W+ + K +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV 159
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE 211
+L + +++++ + ++ ++G P V + L+D CK +EKA++
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
LF +M GLV + ++YT+L+ G + + E+ +M+ + P++ TY ++N C
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K + +A + EM+E+ + + ++TLI GL + +L+EA + ++ K++G P
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TYN ++ +C ++ A + ++K G+ P+ TY+I++ + T A + + M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANK 451
E G +P+ TY I++ F + ++ + + M G++P +H + VLI C +
Sbjct: 400 E-ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 452 LDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
++ A + F+ M++ P +++T+ G A+ ++++ P VA
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+ E +EKM++ G+ P + +N +++ LCK + A ++FD+MR RG+ ++ +Y L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G ++ L N+V +MK + P+++TY LI+ +C K +A+ +++ + +
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
PS ++ L++G A + ++ + G P TY ++ + S M+ A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ M++ G+ P+ TY +++H EA +F+ M E CEP Y+ ++ +
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM-VEKNCEPNEVIYNTMILGY 488
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C E + + +M + + P + + +I LC K A + ++M+D GI P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Query: 472 NLFSTLKQALIDA 484
++ S + +A D+
Sbjct: 549 SILSLISRAKNDS 561
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 137/276 (49%), Gaps = 1/276 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K+A + F++M + G+ + +N L+ LC+ + +A ++ D+M+ G+ P+L +Y
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ L + +CR++K P +VTY IL++ +C+ A EM+E+
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS ++ LI+ +++A++ + G P+ TY+ ++ +C +M++A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R+ M + PN Y+ ++ K ++ A + + M E P V++Y ++
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM-EEKELAPNVASYRYMIE 521
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
+ C E + + ++M GI P + ++ A
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y ++IN+Y +++ + ++ +++EM + +P + F+ L+ + ++ F+ + K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 323 AN----------------------------------GFAPETPTYNAVVGAYCWSMRMDD 348
+ GF+P Y ++ C ++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + EM + G+ N RTY ++++ L K ++ + ++ +M E G P + TY+ ++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM-QEDGVFPNLYTYNCVM 275
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C + R V+D+MR RG+ + + LI LC KL+ A K QM GI
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 469 PPANLFSTLKQALIDAG 485
P ++TL G
Sbjct: 336 PNLITYNTLIDGFCGVG 352
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 202/408 (49%), Gaps = 13/408 (3%)
Query: 70 PNSTIDAALAD---LSVEVSPELVAEVLNKLSNA---GVLALSFFHWAEKQKGFKHSTES 123
PN I LA LS +SPE V+EVL +L A G+ AL FF ++ K +++S
Sbjct: 47 PNHPIQPILAKHIPLS-SLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDS 105
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
F + L ++R F W L+ ++++ LL+ + +E +E F KM
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 182 EK--YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
EK + K V +FN L+ C + +++A+ +F+K+ H PD+K+ ILL G+ +
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAG 224
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ EM F+P+ VTYGI I+ +CK + + EA+ + +M + + I +
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
TLI+G G + +A + +++ G P+ YNA++ + + A +V+ EM++
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 360 GVGPNSRTYDIILHHLIKARTTQ-EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
G+ P+S T+ + ++K++ + + E P T ++++LFC ++
Sbjct: 345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+ + +W M +G P H +L +ALC + + A + Q ++ G
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 5/236 (2%)
Query: 102 VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXX 160
V A F+ ++GFK ++ ++ I+ K R F L EDM + +T
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+A + F+++ K GL P+ +N L+ L K V A ++ +M +G
Sbjct: 286 LIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVC---REMKCECFEPDVVTYGILINAYCKAKKYD 277
+ PD ++ + G + + N VC ++MK P T +L+ +C + +
Sbjct: 346 IEPDSVTFHSMFIGMMKSKEF-GFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ + M EK P H L L + +R ++A E + G P Y
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVY 460
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 258 PDVVTY---GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI--FSTLINGLGSDKRLD 312
P+++++ IL+ K Y+E + + +M+++ + F+ L+ +++ +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
EA +EK + F P+ T N ++ + + + EM + G PNS TY I +
Sbjct: 194 EARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRI 252
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
K R EA +F M + + TV ++ ++D++ RG+
Sbjct: 253 DGFCKKRNFGEALRLFEDMD-RLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
P + L+S+L + A K ++M + GI P + F ++
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A+ F KM G KP + +F L+D LCK S+++A E+ ++M G P++ ++T
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 231 LLEG-----WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
L++G W+++ L + V + + ++P+V TY +I YCK K + A +
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLV----RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+E+ + P+ + ++TLING A E GF P TYNA + + C R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+AY ++++ CG+ + TY I++ K +A + F RM+ + G E + +
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN-KTGFEADMRLNN 502
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I++ FC ++++ ++ + + G++P + +IS C +D A KYF M
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 466 GIRPPANLFSTLKQALIDAGM 486
G P + + +L L M
Sbjct: 563 GCVPDSFTYGSLISGLCKKSM 583
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYT 229
+K+A E E+M + G KP V L+D LCK EKA LF K+ R P++ +YT
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ ++ L R + MK + P+V TY LIN +CKA + A + M ++
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
MP+ + ++ I+ L R EA E K + G + TY ++ C ++ A
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
M + G + R +I++ + + +E+ +F+ + S +G PT TY ++
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS-LGLIPTKETYTSMIS 541
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C E +D+ + + M+ G +P + LIS LC + +D ACK ++ M+D G+ P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 470 P 470
P
Sbjct: 602 P 602
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 187/436 (42%), Gaps = 18/436 (4%)
Query: 65 ILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESF 124
++S +D L+ E + +VA + ++ + ++AL FF+WA + F+H +
Sbjct: 73 VVSSPHRVNLDFDANSLTHEQAITVVASLASE--SGSMVALCFFYWAVGFEKFRHFMRLY 130
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
++L NL + + + + R+ ++ EAV M+
Sbjct: 131 LVTADSL------LANGNLQKAHEVMRCMLRN--------FSEIGRLNEAVGMVMDMQNQ 176
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
GL P N ++++ + +E A+ +FD+M RG+VPD SY +++ G + +
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ M F PD T +++ A C+ + A+ ++ +M + P+ F++LI+G
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV-GP 363
L + +A E E+ NG+ P T+ A++ C + A+R+ ++ + P
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
N TY ++ K A +F RM E G P V+TY ++ C +
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+ M G +P ++ + I +LC ++ A + + G+ ++ L Q
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 484 AGMETTAIHFALKIDK 499
A+ F +++K
Sbjct: 476 QNDINQALAFFCRMNK 491
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 4/295 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ A F +M++ GL P V+ + L++ CK+ S +A EL + M G +P++ +Y
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ ++ E+ + E D VTY ILI CK ++A+ F+ M +
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + LI K++ E+ ++ + G P TY +++ YC +D A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ MK+ G P+S TY ++ L K EA ++ M + G P T +
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM-IDRGLSPPEVTRVTLAY 611
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
+C M + + + + + + L+ LC K+ A +FQ++L+
Sbjct: 612 EYCKRNDSANAMILLEPLDKKLWIRTVR---TLVRKLCSEKKVGVAALFFQKLLE 663
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 187/372 (50%), Gaps = 5/372 (1%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 135 RQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+QF I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
L+D+ K+ ++ A +++ +M+ GL PD +Y++++ + +L +++ EM
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ P++VTY I+++ + KA+ Y A+ Y +MQ P +S ++ LG L+E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A + + + + P+ P Y +V + + ++ A++ M G+ PN T + +L
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
++ EAY + + M + +G P++ TY ++L C + R ++M Q+ A
Sbjct: 618 TFLRVNKIAEAYELLQNMLA-LGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMASTGH 675
Query: 434 PGMHVFFVLISA 445
P H+F + + A
Sbjct: 676 PA-HMFLLKMPA 686
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G PN TY+I++ KAR Q A ++R M + G EP TY I++ + L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYL 555
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ AV+ +M+ + +P V+ +L+ A ++ A +++Q ML G+RP
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ ++AN + Y +G + W R Q G + TY ++ +L +A
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKR------------QPGFKHDGHTYTTMVGNLGRA 377
Query: 379 RTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ + ++ EM GC+P TY+ ++ + L+ M V++QM+ G P
Sbjct: 378 KQ----FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ LI A LD A +Q+M G+ P +S + L AG
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 187/372 (50%), Gaps = 5/372 (1%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 135 RQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+QF I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
L+D+ K+ ++ A +++ +M+ GL PD +Y++++ + +L +++ EM
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ P++VTY I+++ + KA+ Y A+ Y +MQ P +S ++ LG L+E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A + + + + P+ P Y +V + + ++ A++ M G+ PN T + +L
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
++ EAY + + M + +G P++ TY ++L C + R ++M Q+ A
Sbjct: 618 TFLRVNKIAEAYELLQNMLA-LGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMASTGH 675
Query: 434 PGMHVFFVLISA 445
P H+F + + A
Sbjct: 676 PA-HMFLLKMPA 686
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G PN TY+I++ KAR Q A ++R M + G EP TY I++ + L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYL 555
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ AV+ +M+ + +P V+ +L+ A ++ A +++Q ML G+RP
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ ++AN + Y +G + W R Q G + TY ++ +L +A
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKR------------QPGFKHDGHTYTTMVGNLGRA 377
Query: 379 RTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ + ++ EM GC+P TY+ ++ + L+ M V++QM+ G P
Sbjct: 378 KQ----FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ LI A LD A +Q+M G+ P +S + L AG
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 187/372 (50%), Gaps = 5/372 (1%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 135 RQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+QF I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
L+D+ K+ ++ A +++ +M+ GL PD +Y++++ + +L +++ EM
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ P++VTY I+++ + KA+ Y A+ Y +MQ P +S ++ LG L+E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A + + + + P+ P Y +V + + ++ A++ M G+ PN T + +L
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
++ EAY + + M + +G P++ TY ++L C + R ++M Q+ A
Sbjct: 618 TFLRVNKIAEAYELLQNMLA-LGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMASTGH 675
Query: 434 PGMHVFFVLISA 445
P H+F + + A
Sbjct: 676 PA-HMFLLKMPA 686
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G PN TY+I++ KAR Q A ++R M + G EP TY I++ + L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYL 555
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ AV+ +M+ + +P V+ +L+ A ++ A +++Q ML G+RP
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ ++AN + Y +G + W R Q G + TY ++ +L +A
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKR------------QPGFKHDGHTYTTMVGNLGRA 377
Query: 379 RTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ + ++ EM GC+P TY+ ++ + L+ M V++QM+ G P
Sbjct: 378 KQ----FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ LI A LD A +Q+M G+ P +S + L AG
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 164/323 (50%), Gaps = 13/323 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +KMEK ++ +V + ++D LC K+V A LF +M ++G+ P++ +Y L+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 234 G------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
WS LL +M P+VVT+ LI+A+ K K EA Y EM
Sbjct: 299 CLCNYGRWSDASRLLS------DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++++ P +S+LING RLDEA +E + P TYN ++ +C + R++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
+ + EM Q G+ N+ TY+ ++ L +A A +F++M S+ G P + TY I+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSIL 471
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
L C +L+ + V++ ++ + P ++ + ++I +C A K++ F + G+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 468 RPPANLFSTLKQALIDAGMETTA 490
+P +++T+ G++ A
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEA 554
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 157/316 (49%), Gaps = 3/316 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+ F +M+ G++P V +N L+ LC A L M R + P++ +++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ ++TLI G KR++E +E + + G T TYN ++ + D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILR 409
++ +M GV P+ TY I+L L K ++A VF + S+M EP + TY+I++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM--EPDIYTYNIMIE 508
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C +++ ++ + +G+ P + ++ +IS C + A F++M + G P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 470 PANLFSTLKQALIDAG 485
+ ++TL +A + G
Sbjct: 569 NSGTYNTLIRARLRDG 584
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 207/459 (45%), Gaps = 21/459 (4%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELV--AEVLNKL 97
P ++ + IH L H ++ + + ID +A P+L V+N L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAV---------ALIDRMVAR---GCQPDLFTYGTVVNGL 230
Query: 98 SNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR 155
G LALS EK K + + +I+AL + NL +M + +
Sbjct: 231 CKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 156 D-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD 214
T + +A M + + P V F+ L+D K + +A++L+D
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 215 KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYCKA 273
+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LI +CKA
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKA 408
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
K+ +E + + EM ++ ++ + ++TLI GL D A + ++K ++G P+ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
+ ++ C +++ A V + +++ + P+ TY+I++ + KA ++ + +F +S
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 394 EMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLD 453
+ G +P V Y ++ FC + + A++ +M+ G LP + LI A
Sbjct: 529 K-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 454 AACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIH 492
A+ + ++M G A+ S + L D +E + +
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV+ F +M + P + +FNKL+ + K + L ++M++ + DL SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EPD+VT L+N YC K+ EAV +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ F+TLI+GL + EA+ ++ A G P+ TY VV C +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +M++ + + Y I+ L + +A ++F M ++ G P V TY+ ++R
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIR 298
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K + +M+ I P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 470 PANLFSTL 477
+S+L
Sbjct: 359 DIFTYSSL 366
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EAV ++M +P FN L+ L +A L D+M RG PDL +Y
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ ++ + ++M+ E DVV Y +I+A C K ++A+ + EM K
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +++LI L + R +A P T++A++ A+ ++ +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ DEM + + P+ TY +++ EA +F M S+ C P V TY+ +++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIK 403
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R++ M ++ +M RG++ + LI L A D A K F++M+ G+ P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 470 PANLFSTLKQALIDAG 485
+S L L G
Sbjct: 464 DIITYSILLDGLCKYG 479
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
D +LD+A++ + + + P +N ++ A + D + + M+ + + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y+I+++ + A +V +M ++G EP + T +L +C +R+ +A+ DQM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMM-KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
P F LI L NK A +M+ G +P + T+ L G
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 488 TTAIHFALKIDK 499
A+ K++K
Sbjct: 237 DLALSLLKKMEK 248
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 3/393 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXX 161
AL F+ K+ GFKH+ ++ ++IE LG +F+ + ++ DM++ +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
KV+EAV FE+M+ Y +P V +N ++ VL S ++A +++ +MR RG+
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
PD+ S+TI ++ + + + M + E +VV Y ++ + + E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ +M + F+ L+ L + E + +K G P TYN + C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
+D A R+V + + G P+ TY+ +++ L K QEA +M +E G EP
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDS 321
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
TY+ ++ +C + + + G +P + LI LCH + + A F +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 462 MLDVGIRPPANLFSTLKQALIDAGMETTAIHFA 494
L GI+P L++TL + L + GM A A
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 27/371 (7%)
Query: 108 FHWAEKQKGFKHSTESFHALI---EALGK-IRQFKVIWN-LVEDMKQRKLLTRDTXXXXX 162
F + G H E+ AL EALGK I+ +++N L++ + + ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL-------- 408
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
EA + +M + GL PEV FN LV+ LCK V A L M +G
Sbjct: 409 ----------EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ ++ IL+ G+S Q + E+ M +PDV TY L+N CK K+++ +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
Y M EK P+ F+ L+ L ++LDEAL E+ K P+ T+ ++ +C
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 343 SMRMDDAYRVVDEMKQC-GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE-MGCEPT 400
+ +D AY + +M++ V ++ TY+II+H + A +F+ M +G P
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PD 636
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
TY +++ FC +++ +M G +P + +I+ LC +++ A
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 461 QMLDVGIRPPA 471
+M+ G+ P A
Sbjct: 697 RMVQKGLVPEA 707
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EA KM GL+P+ +N L+ CK V+ A+ + G VPD +Y
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + R + E + +P+V+ Y LI EA +EM EK
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P F+ L+NGL + +A + + G+ P+ T+N ++ Y ++M++A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++D M GV P+ TY+ +L+ L K ++ ++ M E GC P + T++I+L
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM-VEKGCAPNLFTFNILLE 539
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
C +LD + + ++M+ + + P F LI C LD A F++M
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 1/301 (0%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G KP+V +N L+ LCK+ ++A+ KM + GL PD +Y L+ G+ + +
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ + F PD TY LI+ C + + A+ ++E K + P+ +++TLI G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
L + + EA + + G PE T+N +V C + DA +V M G P+
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
T++I++H + A + M G +P V TY+ +L C + + M +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
M +G P + F +L+ +LC KLD A ++M + + P A F TL
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 485 G 485
G
Sbjct: 580 G 580
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 35/320 (10%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P+ + L+D LC +A LF++ +G+ P++ Y L++G S Q +L
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
++ EM + P+V T+ IL+N CK +A G M K P F+ LI+G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ +++ ALE + NG P+ TYN+++ C + + +D M + G PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 365 SRTYDIILHHLIKARTTQE-----------------------------------AYSVFR 389
T++I+L L + R E AY++FR
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
+M + TY+II+ F ++ + M ++ +M R + P + + +++ C
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 450 NKLDAACKYFQQMLDVGIRP 469
++ K+ +M++ G P
Sbjct: 651 GNVNLGYKFLLEMMENGFIP 670
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 11/382 (2%)
Query: 19 PLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIP----HTPHADKICKILSKSPNSTI 74
P S Y + ++L + + G + +P + D +C N +
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH--EGETNRAL 376
Query: 75 DAALADLSVEVSPELV--AEVLNKLSNAG-VLALSFFHWAEKQKGFKHSTESFHALIEAL 131
L + P ++ ++ LSN G +L + +KG ++F+ L+ L
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 132 GKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
K+ LV+ M + T K++ A+E + M G+ P+V
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+N L++ LCK+ E E + M +G P+L ++ ILLE + + L + E
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDK 309
MK + PD VT+G LI+ +CK D A + +M+E + S ++ +I+
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ A + +++ P+ TY +V +C + ++ Y+ + EM + G P+ T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 370 IILHHLIKARTTQEAYSVFRRM 391
+++ L EA + RM
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRM 698
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 183/368 (49%), Gaps = 5/368 (1%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ AL + + +VL ++ N AL FF+W ++Q GFKH ++ ++ LG+
Sbjct: 314 EEALHNFGFRMDAYQANQVLKQMDNYAN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 372
Query: 135 RQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+QF I L+++M + T +KEA+ F +M++ G +P+ +
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
L+D+ K+ ++ A +++ +M+ GL PD +Y++++ + +L + + EM
Sbjct: 433 CTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG 492
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ P++VT+ I+I + KA+ Y+ A+ Y +MQ P +S ++ LG L+E
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A + + + + P+ P Y +V + + +D A++ M Q G+ PN T + +L
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
++ EAY++ + M + +G P++ TY ++L C + R + +M Q+ A
Sbjct: 613 TFLRVHRMSEAYNLLQSMLA-LGLHPSLQTYTLLLSC-CTDARSNFDMGFCGQLMAVSGH 670
Query: 434 PGMHVFFV 441
P H+F +
Sbjct: 671 PA-HMFLL 677
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
FY + GF + TY +VG + + + +++DEM + G PN+ TY+ ++H
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYG 405
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
+A +EA +VF +M E GCEP TY ++ + LD+ M ++ +M+ G+ P
Sbjct: 406 RANYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ V+I+ L A L AA + F +M+ G P F+ +
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 312 DEALEFY----EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+EAL + + ++AN + Y +G + W R Q G + T
Sbjct: 314 EEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKR------------QPGFKHDGHT 361
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y ++ +L +A+ E + M + GC+P TY+ ++ + L M V++QM
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ G P + LI A LD A +Q+M + G+ P +S + L AG
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 158/317 (49%), Gaps = 1/317 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A+ F+++ G KP V + L+ LCK++ + A ELF++M G P++ +Y
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + + R+M EP+V+T+ LI+A+ K K EA Y+ M +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P + +LINGL LDEA + + + NG P Y ++ +C S R++D
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM Q GV N+ TY +++ A VF +MSS P + TY+++L
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLD 406
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C +++ + +++ MR R + + + ++I +C K++ A F + G++P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 470 PANLFSTLKQALIDAGM 486
++T+ G+
Sbjct: 467 NVITYTTMISGFCRRGL 483
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 3/305 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ AVE F +M G +P V +N LV LC+ A L M R + P++ ++T
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + + L+ E+ M PDV TYG LIN C DEA ++ M+
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ I++TLI+G KR+++ ++ + + G T TY ++ YC R D A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILR 409
V ++M P+ RTY+++L L ++A +F M EM + + TY II++
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM--DINIVTYTIIIQ 441
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C +++ ++ + ++G+ P + + +IS C + A F++M + G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 470 PANLF 474
+++
Sbjct: 502 NESVY 506
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 6/346 (1%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRK---LLTRDTXXXXXXXXXXXXKVKEAVE 176
S F L+ + K+ ++ V+ +L E M+ LL T + A
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLC--TCNIVMHCVCLSSQPCRASC 139
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
KM K G +P++ F L++ C +E A LFD++ G P++ +YT L+
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ ++L E+ +M P+VVTY L+ C+ ++ +A +M ++ + P+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
F+ LI+ +L EA E Y P+ TY +++ C +D+A ++ M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER 416
++ G PN Y ++H K++ ++ +F MS + G TY ++++ +C R
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGR 378
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
D+ V++QM +R P + + VL+ LC K++ A F+ M
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A++ F +M P + DF +L+ V+ K + LF++M+ G+ P L +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ R + +M FEPD+VT+ L+N YC + ++A+ + ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++TLI L ++ L+ A+E + + NG P TYNA+V C R DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +M + + PN T+ ++ +K EA ++ M +M P V TY ++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYGSLIN 301
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C LD ++ M G P ++ LI C + +++ K F +M G+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 470 PANLFSTLKQALIDAG 485
++ L Q G
Sbjct: 362 NTITYTVLIQGYCLVG 377
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 2/291 (0%)
Query: 115 KGFKHSTESFHALIEALGKI-RQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
G + + +++AL+ L +I R W L + MK+R T K+ E
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E + M + + P+V + L++ LC +++A+++F M G P+ YT L+
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + + + ++ EM + + +TY +LI YC + D A +++M + P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ L++GL + ++++AL +E + TY ++ C +++DA+ +
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+ G+ PN TY ++ + EA S+F++M + G P S Y
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED-GFLPNESVY 506
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A +LF +M H +P + +T LL ++ V + +M+ P + T I+++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
C + + A F +M + P F++L+NG R+++A+ +++ GF P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
TY ++ C + ++ A + ++M G PN TY+ ++ L + +A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 389 RRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
R M EP V T+ ++ F +L +++ M + P + + LI+ LC
Sbjct: 247 RDMMKRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTL-----KQALIDAGME 487
LD A + F M G P +++TL K ++ GM+
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 159/308 (51%), Gaps = 1/308 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KME ++ +V FN ++D LCK + V+ A LF +M +G+ P++ +Y+ L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+++ +M + P++VT+ LI+A+ K K+ EA Y +M ++++ P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+++L+NG RLD+A + +E + P+ TYN ++ +C S R++D +
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM G+ ++ TY ++ L A VF++M S+ G P + TY I+L C+
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCN 482
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+L+ + V+D M+ I ++++ +I +C A K+D F + G++P
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 474 FSTLKQAL 481
++T+ L
Sbjct: 543 YNTMISGL 550
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 188/418 (44%), Gaps = 38/418 (9%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A+ F K + E F+ L+ A+ K+++F V+ +L E M++ +++ T
Sbjct: 69 AIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G +P + + L++ C K + A L D+M G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 223 PDLKSYTILLEGW-------------------SQQQNLLR----VNEVCR---------- 249
PD ++T L+ G Q NL+ VN +C+
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 250 --EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M+ E DVV + +I++ CK + D+A+ + EM+ K + P+ +S+LI+ L S
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
R +A + P T+NA++ A+ + +A ++ D+M + + P+ T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y+ +++ +A +F M S+ C P V TY+ +++ FC +R++ ++ +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
RG++ + LI L H D A K F+QM+ G+ P +S L L + G
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 188/414 (45%), Gaps = 25/414 (6%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P LV V+N
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAV--------------ALVDRMVQRGCQPNLVTYGVVVN 233
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LAL+ + E K + F+ +I++L K R NL ++M+ + +
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 154 TRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A + M + + P + FN L+D K +A++L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D M R + PD+ +Y L+ G+ L + ++ M +CF PDVVTY LI +C
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFC 411
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K+K+ ++ + EM + ++ ++TLI GL D D A + +++ ++G P+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TY+ ++ C + +++ A V D M++ + + Y ++ + KA + + +F +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
S + G +P V TY+ ++ C + L A+ +M+ G LP + LI A
Sbjct: 532 SLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
S+ W++ + E +F+ALI+A K +F L +DM +R +
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T ++ +A + FE M P+V +N L+ CKSK VE ELF +M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
HRGLV D +YT L++G + +V ++M + PD++TY IL++ C K
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
++A+ + MQ+ + +I++T+I G+ ++D+ + + G P TYN +
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
+ C + +AY ++ +MK+ G PNS TY+ ++ ++ + + R M S
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 169/374 (45%), Gaps = 4/374 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VK 172
Q+G + + ++ ++ L K + NL+ M+ K+ + V
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ F++ME G++P V ++ L+ LC A +L M + + P+L ++ L+
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ + ++ +M +PD+ TY L+N +C + D+A + M K+
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++TLI G KR+++ E + + G +T TY ++ D+A +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLF 411
+M GV P+ TY I+L L ++A VF M SE+ + + Y ++
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD--IYIYTTMIEGM 515
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C ++D ++ + +G+ P + + +IS LC L A ++M + G P +
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 472 NLFSTLKQALIDAG 485
++TL +A + G
Sbjct: 576 GTYNTLIRAHLRDG 589
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +FNKL+ + K K + L +KM+ +V L +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + + +M +EP +VT L+N YC K+ +AV +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P TY VV C D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M+ + + ++ I+ L K R +A ++F+ M ++ G P V TY ++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLIS 303
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C R + M + I P + F LI A K A K + M+ I P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 470 PANLFSTL 477
+++L
Sbjct: 364 DIFTYNSL 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L NGL D +LD+A+ + + P +N ++ A + D + ++M++
Sbjct: 57 LRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ TY+I+++ + A ++ +M ++G EP++ T +L +C +R+
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+A+ DQM G P F LI L NK A +M+ G +P + +
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 481 LIDAGMETTAIHFALKID 498
L G A++ K++
Sbjct: 235 LCKRGDTDLALNLLNKME 252
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
F+ + Y ++ M++DDA + M + P+ ++ +L + K +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
S+ +M + + TY+I++ FC ++ + +A+ +M G P + L
Sbjct: 103 VVISLGEKMQ-RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
++ CH ++ A QM+++G RP F+TL L
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 203/468 (43%), Gaps = 57/468 (12%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
V+P +VAEVL KL N +A FFHWA KQKG+KH +++A L + F+ L
Sbjct: 123 VTPSIVAEVL-KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLP 181
Query: 145 EDM---------KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
E M KQ ++L R + +EKM+K+G KP V +N+
Sbjct: 182 ELMDSQGRPPSEKQFEILIR--------MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNR 233
Query: 196 LVDV-----------------------------------LCKSKSVEKAQELFDKMRHRG 220
++D LCK+ +E+ E+ +MR
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL 293
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
PD+ +YT +++ + NL V EM+ + +PDV+ YG L+ CK + +
Sbjct: 294 CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY 353
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ EM+ K ++ I+ LI G +D ++ A +E +G+ + YNAV+
Sbjct: 354 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
C ++D AY++ + + P+ T I+ + + +V R+ E+G P
Sbjct: 414 CSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI-GELG-YPV 471
Query: 401 VSTYDIILRLFC-DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+L C DEE+ M + V+ ++ +G + V+ +L+ AL + + F
Sbjct: 472 SDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 460 QQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+M +G P ++ +S ++ G A F KI ++ P +A
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 177/399 (44%), Gaps = 9/399 (2%)
Query: 92 EVLNKLSNAGVLALSFFHWAEKQK--GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
E+L ++ L ++ EK K GFK ++ +++AL K F + + ED K+
Sbjct: 197 EILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKE 256
Query: 150 RKLLTRDTXXXXXXXXX-XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
L+ T +++E +E ++M + KP+V + ++ L +++
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ ++D+MR + PD+ +Y L+ G + + R E+ EMK + D Y +LI
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+ K A + ++ + + I++ +I GL S ++D+A + ++ P
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS-- 386
+ T + ++ AY R+ D V++ + + G P S Y L+ A + A +
Sbjct: 437 DFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-PVS-DYLTQFFKLLCADEEKNAMALD 494
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
VF + ++ +VS Y+I++ + ++++ +MR G P + + I
Sbjct: 495 VFYILKTK--GHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ AAC + ++++++ P + +L + L G
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIG 591
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 5/215 (2%)
Query: 181 MEKYG-LKPEVSDF-NKLVDVLCKSKSVEK-AQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+E+ G L VSD+ + +LC + A ++F ++ +G + Y IL+E +
Sbjct: 461 LERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH-GSVSVYNILMEALYK 519
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
++ + + EM+ FEPD +Y I I + + A F+ ++ E + +PS
Sbjct: 520 MGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAA 579
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ +L GL +D + + N P Y V C + +VVDEM
Sbjct: 580 YLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEM 639
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
Q GV N Y I+ + K T + A VF +
Sbjct: 640 NQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 179/379 (47%), Gaps = 5/379 (1%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKE 173
KG + ++ ++ L K + +NL+ M+Q KL K + +
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ F++ME G++P V ++ L+ LC A L M R + PD+ +++ L++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ L+ ++ EM +P +VTY LIN +C + DEA + M K+ P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI G KR++E +E + + G T TYN ++ + D A +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFC 412
EM GV PN TY+ +L L K ++A VF + S+M EPT+ TY+I++ C
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYNIMIEGMC 512
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+++ ++ + +G+ P + + +IS C + A F++M + G P +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 473 LFSTLKQA-LIDAGMETTA 490
++TL +A L D E +A
Sbjct: 573 CYNTLIRARLRDGDREASA 591
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 3/383 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A++ F K + F E F L+ A+ K+ +F V+ +L E M+ + T
Sbjct: 65 AVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G +P + + L++ C SK + +A L D+M G
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P+ ++ L+ G + M + +PD+VTYG+++N CK D A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M++ + P I++T+I+GL K +D+AL +++ + G P TY++++ C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
R DA R++ +M + + P+ T+ ++ +K EA ++ M +P++
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIV 362
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
TY ++ FC +RLD +++ M ++ P + + LI C +++ + F++M
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 463 LDVGIRPPANLFSTLKQALIDAG 485
G+ ++ L Q L AG
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAG 445
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 209/455 (45%), Gaps = 19/455 (4%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELV--AEVLNKL 97
P ++ + IH L H ++ + + ID +A P+LV V+N L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAM---------ALIDRMVAK---GCQPDLVTYGVVVNGL 231
Query: 98 SNAGVLALSFFHWAEKQKG-FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD 156
G L+F + ++G + ++ +I+ L K + NL ++M+ + +
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 157 -TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T + +A M + + P+V F+ L+D K + +A++L+D+
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAK 274
M R + P + +Y+ L+ G+ L ++ M + CF PDVVTY LI +CK K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ +E + + EM ++ ++ + ++ LI GL D A E +++ ++G P TYN
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ C + +++ A V + +++ + P TY+I++ + KA ++ + +F +S +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
G +P V Y+ ++ FC + + A++ +M+ G LP + LI A +A
Sbjct: 531 -GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
+ + ++M G A+ + L D ++ +
Sbjct: 590 SAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV F +M K P + +F+KL+ + K + L ++M++ G+ + +Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EP++VT L+N YC +K+ EAV +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ F+TLI+GL + EA+ ++ A G P+ TY VV C D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ ++++M+Q + P Y+ I+ L K + +A ++F+ M ++ G P V TY ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLIS 299
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K + +M+ I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 470 PANLFSTL 477
+S+L
Sbjct: 360 SIVTYSSL 367
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 4/205 (1%)
Query: 303 NGLGSDKRLDEALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
NGL S+ +LD+A+ F E K+ F P ++ ++ A + D + ++M+ G+
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
N TY I+++ + A +V +M ++G EP + T +L +C +R+ +
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
A+ DQM G P F LI L NK A +M+ G +P + + L
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 482 IDAGMETTAIHFALKIDKLRKTPLV 506
G A + K+++ + P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGV 256
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 161/321 (50%), Gaps = 1/321 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +EAV + M+ +G P V +N +++ LCK++ + A E+F M +G+ D +Y
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G S + R+M +P+V+ + LI+ + K EA Y EM +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+++P+ +++LING L +A ++ + G P+ TYN ++ +C S R++D
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ EM G+ ++ TY+ ++H +A A VF RM + G P + TY+I+L
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM-VDCGVSPDIVTYNILLD 402
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ +++ + + + ++ + + + ++I LC +KL A F+ + G++P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 470 PANLFSTLKQALIDAGMETTA 490
A + T+ L G++ A
Sbjct: 463 DAIAYITMISGLCRKGLQREA 483
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 34/350 (9%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A F +M + P + DF +++ V+ K + L+ KM + G+ DL S+T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L + +M F P +VT G L+N +C+ ++ EAV M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+P+ I++T+INGL ++ L+ ALE + + G + TYN ++ S R DA
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM-------------- 395
R++ +M + + PN + ++ +K EA ++++ M
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 396 --------------------GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
GC P V TY+ ++ FC +R++ M ++ +M +G++
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ LI C A KL+ A K F +M+D G+ P ++ L L + G
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 172/382 (45%), Gaps = 12/382 (3%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKEA 174
GF+ S + +L+ + +F+ +LV+ M + + + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E F MEK G++ + +N L+ L S A L M R + P++ +T L++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ ++ NLL + +EM P+V TY LIN +C +A + M K P
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
++TLI G KR+++ ++ + + G + TYN ++ YC + +++ A +V +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFCD 413
M CGV P+ TY+I+L L ++A + + SEM + + TY+II++ C
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM--DVDIITYNIIIQGLCR 441
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
++L ++ + +G+ P + +IS LC A K ++M + G P +
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 474 --------FSTLKQALIDAGME 487
+++L LI A E
Sbjct: 502 YDETLRDHYTSLSAELIKAAHE 523
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 145/307 (47%), Gaps = 3/307 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
AL F+ EK KG + +++ LI L ++ L+ DM +RK+
Sbjct: 203 ALEVFYCMEK-KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 164 XX-XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+ EA +++M + + P V +N L++ C + A+ +FD M +G
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ +Y L+ G+ + + + ++ EM + D TY LI+ YC+A K + A
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++ M + + P ++ L++ L ++ ++++AL E + + + TYN ++ C
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ ++ +A+ + + + GV P++ Y ++ L + +EA + RRM E G P+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM-KEDGFMPSER 500
Query: 403 TYDIILR 409
YD LR
Sbjct: 501 IYDETLR 507
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ D+A + + + P + V+ + D + +M+ G+ + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRA 429
I++H + A ++ +M ++G P++ T +L FC R +++ D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMM-KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 430 RGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
G +P + ++ +I+ LC L+ A + F M GIR A ++TL L ++G T
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 490 AIHFALKIDKLRKTPLV 506
A + K + P V
Sbjct: 238 AARLLRDMVKRKIDPNV 254
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 188/408 (46%), Gaps = 38/408 (9%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G+K S S L+ AL K + + + ++M +RK+ T K+ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCK---SKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ E M+ YG P V +N L+D CK + + KA + +M + P+L ++ IL
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G+ + NL +V +EM + +P+V++Y LIN C K EA+ +M +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++ LING + L EAL+ + K G P T YN ++ AYC ++DD +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS------------------- 392
+ +EM++ G+ P+ TY+ ++ L + + A +F +++
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCR 482
Query: 393 --------------SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM-RARGILPGMH 437
S+MG +P TY+I+++ +C E L + QM + R + +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ VL+ KL+ A +ML+ G+ P + +K+ ++D G
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 7/335 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
E F++ YG K L+ L K + ++ +M R + P++ ++ +++
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK----AKKYDEAVGFYHEMQEK 289
+ + + +V +MK P+VV+Y LI+ YCK K Y +A EM E
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVEN 290
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P+ F+ LI+G D L +++ +++ P +YN+++ C ++ +A
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ D+M GV PN TY+ +++ K +EA +F + + G PT Y++++
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ-GAVPTTRMYNMLID 409
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C ++D A+ ++M GI+P + + LI+ LC ++AA K F Q+ G+ P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
F L + G A ++ K+ P
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 2/369 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ G++ T +F LI L + LV+ M QR T +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A KME ++ +V FN ++D LCK + V+ A LF +M +G+ P++ +Y+ L+
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+++ +M + P++VT+ LI+A+ K K+ EA + +M ++++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P +++LING RLD+A + +E + P+ TYN ++ +C S R++D +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
EM G+ ++ TY ++ L A VF++M S+ G P + TY I+L C
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLC 406
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ +L+ + V+D M+ I ++++ +I +C A K+D F + G++P
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 473 LFSTLKQAL 481
++T+ L
Sbjct: 467 TYNTMISGL 475
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 172/364 (47%), Gaps = 4/364 (1%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKM 181
F+ L+ A+ K+++F ++ +L E M QR ++ + T ++ A+ KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
K G +P + + L++ C K + A L D+M G PD ++T L+ G
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ M +P++VTYG+++N CK D A ++M+ + IF+T+
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+ L + +D+AL +++ + G P TY++++ C R DA +++ +M + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
PN T++ ++ +K EA + M +P + TY+ ++ FC +RLD
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+++ M ++ P + + LI C + +++ + F++M G+ ++TL Q L
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 482 IDAG 485
G
Sbjct: 371 FHDG 374
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 157/316 (49%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G +P+ F L+ L +A L D+M RG P+L +Y
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G ++ ++ + +M+ E DVV + +I++ CK + D+A+ + EM+ K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L S R +A + P T+NA++ A+ + +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ D+M + + P+ TY+ +++ +A +F M S+ C P + TY+ +++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIK 333
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R++ ++ +M RG++ + LI L H D A K F+QM+ G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 470 PANLFSTLKQALIDAG 485
+S L L + G
Sbjct: 394 DIMTYSILLDGLCNNG 409
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 187/414 (45%), Gaps = 25/414 (6%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P LV V+N
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAV--------------ALVDRMVQRGCQPNLVTYGVVVN 158
Query: 96 KLSNAGVLALSFFHWAEKQKGFKHSTES--FHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G + L+F + K + K + F+ +I++L K R NL ++M+ + +
Sbjct: 159 GLCKRGDIDLAF-NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 154 TRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A + M + + P + FN L+D K +A++L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
D M R + PD+ +Y L+ G+ L + ++ M +CF PD+ TY LI +C
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFC 336
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K+K+ ++ + EM + ++ ++TLI GL D D A + +++ ++G P+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TY+ ++ C + +++ A V D M++ + + Y ++ + KA + + +F +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
S + G +P V TY+ ++ C + L A+ +M+ G LP + LI A
Sbjct: 457 SLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EAV ++M + G +P + + +V+ LCK ++ A L +KM + D+ +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + +++ + +EM+ + P+VVTY LI+ C ++ +A +M EK
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ F+ LI+ + + EA + ++ P+ TYN+++ +C R+D A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ + M P+ TY+ ++ K++ ++ +FR MS TV+ +I
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
LF D + D V+ QM + G+ P + + +L+ LC+ KL+ A + F M I+
Sbjct: 370 LFHDGD-CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 470 PANLFSTLKQALIDAG 485
+++T+ + + AG
Sbjct: 429 DIYIYTTMIEGMCKAG 444
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 3/273 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
+F+ALI+A K +F L +DM +R + D T ++ +A + FE
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M P++ +N L+ CKSK VE ELF +M HRGLV D +YT L++G +
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+V ++M + PD++TY IL++ C K ++A+ + MQ+ + +I++T
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I G+ ++D+ + + G P TYN ++ C + +AY ++ +MK+ G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
P+S TY+ ++ ++ + + R M S
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 1/290 (0%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P + +FNKL+ + K K + L +KM+ G+ +L +Y IL+ + ++ + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M +EP +VT L+N YC K+ +AV +M E P F+TLI+GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+ EA+ ++ G P TY VV C +D A+ ++++M+ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
++ I+ L K R +A ++F+ M ++ G P V TY ++ C R + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ I P + F LI A K A K M+ I P +++L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-------------- 337
+PS F+ L++ + K+ D + EK + G + TYN ++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 338 ---------------------GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
YC R+ DA +VD+M + G P++ T+ ++H L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
EA ++ RM + GC+P + TY +++ C +D+ + ++M A I +
Sbjct: 127 LHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+F +I +LC +D A F++M GIRP +S+L L G
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 183/429 (42%), Gaps = 42/429 (9%)
Query: 103 LALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----------- 150
LAL F +A K GF H+ +++H+++ L + R F + +L+ D++
Sbjct: 64 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 123
Query: 151 -------KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM---------------------E 182
L R VK +V + + E
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 183
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+G+ P + N LV LCK +E A ++ D++ GLVP+L +YT +L G+ + ++
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
V EM + PD TY +L++ YCK ++ EA +M++ + P+ + +I
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
L +K+ EA +++ F P++ V+ A C ++D+A + +M +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
P++ ++H L K EA +F E G P++ TY+ ++ C++ L
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEF--EKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
+WD M R P + VLI L + + ++ML++G P F L + L
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 483 DAGMETTAI 491
G E A+
Sbjct: 482 KLGKEEDAM 490
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 199/461 (43%), Gaps = 19/461 (4%)
Query: 14 FSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPH-----TPHADKICKILSK 68
+ + P KP+P L P I QN+ +L+I T + D IL K
Sbjct: 33 YCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFK 92
Query: 69 SPNST----IDAALADLSVEVSP-----ELVAEVLNKLSNAGVLALSFFHWAE-KQKGFK 118
+ +++ +ADL P L ++L AG S + G K
Sbjct: 93 LSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK 152
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVE 176
S S + L+ L + ++F ++ + ++ K+ +T + T ++ A +
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
+++ GL P + + ++ +E A+ + ++M RG PD +YT+L++G+
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ V +M+ EP+ VTYG++I A CK KK EA + EM E++ MP
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ +I+ L D ++DEA + K N P+ + ++ C R+ +A ++ DE
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER 416
++ G P+ TY+ ++ + + EA ++ M E C+P TY++++
Sbjct: 393 EK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM-YERKCKPNAFTYNVLIEGLSKNGN 450
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
+ + V ++M G P F +L L K + A K
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KMEK ++ +V ++ ++D LCK + V+ A LF +M ++G+ PD+ +Y+ L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 234 G------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
WS LL +M P+VVT+ LI+A+ K K EA + EM
Sbjct: 284 CLCNYGRWSDASRLLS------DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++++ P+ +++LING RLDEA + + + P+ TYN ++ +C + ++
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
D + +M + G+ N+ TY ++H +A A VF++M S+ G P + TY+ +
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTL 456
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
L C +L+ M V++ ++ + P ++ + ++ +C A K++ F + G+
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 468 RPPANLFSTLKQALIDAGMETTAIHFALKI 497
+P ++T+ G++ A +K+
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 175/385 (45%), Gaps = 9/385 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK----QRKLLTRDTXX 159
A+ F K + F E F L+ A+ K+++F ++ + E M+ L T +
Sbjct: 49 AVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
++ A+ KM K G P + N L++ C + +A L D+M
Sbjct: 108 NCLCRRS---QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G PD ++T L+ G Q + M + +PD+VTYG +IN CK + D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ ++M++ + I+ST+I+ L + +D+AL + + G P+ TY++++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
C R DA R++ +M + + PN T++ ++ K EA +F M + +P
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDP 343
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+ TY+ ++ FC +RLD ++ M ++ LP + + LI+ C A K+ + F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 460 QQMLDVGIRPPANLFSTLKQALIDA 484
+ M G+ ++TL A
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 4/373 (1%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKE 173
KG + ++ A+I L K + + NL+ M++ K+ + V +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ F +M+ G++P+V ++ L+ LC A L M R + P++ ++ L++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++++ L+ ++ EM +P++VTY LIN +C + DEA + M K+ +P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLING K++ + +E + G T TY ++ + + D+A V
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFC 412
+M GV PN TY+ +L L K ++A VF + S+M EP + TY+I+ C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM--EPDIYTYNIMSEGMC 496
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+++ ++ + +G+ P + + +IS C + A F +M + G P +
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 473 LFSTLKQALIDAG 485
++TL +A + G
Sbjct: 557 TYNTLIRAHLRDG 569
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EAV+ F +M K P + +F+KL+ + K K + +KM G+ +L +Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ ++ L + +M + P +VT L+N +C + EAV +M E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TL++GL + EA+ E+ G P+ TY AV+ C D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M++ + + Y ++ L K R +A ++F M ++ G P V TY ++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLIS 283
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K F +M+ I P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 470 PANLFSTL 477
+++L
Sbjct: 344 NIVTYNSL 351
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 7/299 (2%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F++LI+A K + L ++M QR + T ++ EA + F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P+V +N L++ CK+K V ELF M RGLV + +YT L+ G+ Q +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V ++M + P+++TY L++ CK K ++A+ + +Q+ M P + ++ +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
G+ ++++ + + G P+ YN ++ +C ++AY + +MK+ G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE--PTVSTYDIILRLFCDEERLD 418
P+S TY+ ++ ++ + + + M S C STY ++ + D RLD
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRS---CRFAGDASTYGLVTDMLHD-GRLD 606
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K DEAV + EM + PS FS L++ + K+ D + F EK
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK-------------- 90
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
M+ GV N TY+I+++ L + A ++ +M +
Sbjct: 91 ---------------------MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM-K 128
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
+G P++ T + +L FC R+ +A+ DQM G P F L+ L NK
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
A ++M+ G +P + + L G A++ K++K
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+++D+A + EM + P+ + +L + K + S +M +G + T
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI-LGVSHNLYT 102
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
Y+I++ C +L +A+ +M G P + L++ CH N++ A QM+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 464 DVGIRPPANLFSTLKQALIDAGMETTAI 491
++G +P F+TL L + A+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAV 190
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 184/405 (45%), Gaps = 20/405 (4%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI-----------R 135
P L+ VLN + +A FF+W ++Q K S ++F A++E L + R
Sbjct: 85 PNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAER 144
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE----TFEKMEKYGLKPEVS 191
+ + ++D+ + K E +FEKM + G P V
Sbjct: 145 SIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVR 204
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
+ N ++ VL S+ + KA +++ M G++P + ++ +L+ + +L RV+++ EM
Sbjct: 205 NCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM 264
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
K E VTY ILIN + K K +EA F+ +M+ +P+ F+ LI G
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
D+A ++ G P T TYN + A C R+DDA ++ M P+ +Y+ +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL 380
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+H IK EA +F + + P++ TY+ ++ C+ L+ + ++M +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAG-DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFST 476
I P + + L+ L A + + +ML GI+P ++T
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 182/427 (42%), Gaps = 41/427 (9%)
Query: 82 SVEVSPELVAEVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
++E S ++N S G + + FH ++ GF + SF+ LIE K F
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 141 WNLVEDM--------------------------KQRKLLTR------DTXXXXXXXXXXX 168
W + ++M R+LL+ +
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K EA F+ + + P + +N L+D LC+S ++E AQ L ++M + + PD+ +Y
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-Q 287
T L++G+ + NL EV EM + +PD Y + D+A + EM
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P I++ I+GL L +A+EF K G P+ TY V+ Y + +
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTY 404
A + DEM + + P+ TY ++++ KA ++A+ + S+EM G P V T+
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF----QYSTEMKKRGVRPNVMTH 623
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
+ +L C +D +M GI P + + +LIS C K + K +++MLD
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 465 VGIRPPA 471
I P
Sbjct: 684 KEIEPDG 690
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+++ +N +D LCK ++ KA E K+ GLVPD +YT ++ G+ + +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
EM + P V+TY +LI + KA + ++A + EM+++ + P+ + L+ G+
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+DEA + K + G P +Y ++ C + ++ ++ EM + P+ T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 368 YDIILHHLIKARTTQEA 384
+ + HL K ++E
Sbjct: 693 HRALFKHLEKDHESREV 709
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 86/164 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+E K+ + GL P+ + ++ ++ + A+ L+D+M + L P + +Y +L+
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ L + + EMK P+V+T+ L+ CKA DEA + +M+E+ +
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
P+ + ++ LI+ ++ +E ++ Y++ P+ T+ A+
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K A +++M + L P V + L+ K+ +E+A + +M+ RG+ P++ ++
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + N+ +M+ E P+ +Y +LI+ C +K++E V Y EM +K
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ P + L L D E +EF E+
Sbjct: 685 EIEPDGYTHRALFKHLEKDHESRE-VEFLERL 715
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 177/379 (46%), Gaps = 3/379 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VK 172
Q+G + ++ ++ L K + +L++ M++ K+ K +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ F +M+ G++P+V ++ L+ LC A L M R + P++ +++ L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +STLI G KR++E +E + + G T TY ++ + + D+A V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+M GV PN TY+I+L L K +A VF + EP + TY+I++ C
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMC 514
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+++ ++ + +G+ P + + +IS C + A ++M + G P +
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 473 LFSTLKQA-LIDAGMETTA 490
++TL +A L D E +A
Sbjct: 575 TYNTLIRARLRDGDREASA 593
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ ++ + ++M+ E DVV Y +I+ CK K D+A+ + EM K
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P +S+LI+ L + R +A P T++A++ A+ ++ +A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ DEM + + P+ TY +++ EA +F M S+ C P V TY +++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIK 406
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R++ M ++ +M RG++ + LI A D A F+QM+ VG+ P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 470 PANLFSTLKQALIDAG 485
++ L L G
Sbjct: 467 NILTYNILLDGLCKNG 482
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 204/458 (44%), Gaps = 25/458 (5%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P + + IH L H ++ + AL D V+ P+LV V+N
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAV--------------ALVDQMVQRGCQPDLVTYGTVVN 231
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LALS EK K + ++ +I+ L K + NL +M + +
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 154 TRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P V F+ L+D K + +A++L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LI +C
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFC 409
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ +E + + EM ++ ++ + ++TLI+G + D A +++ + G P
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TYN ++ C + ++ A V + +++ + P+ TY+I++ + KA ++ + +F +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANK 451
S + G P V Y+ ++ FC + + ++ +M+ G LP + LI A
Sbjct: 530 SLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 452 LDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
+A+ + ++M G A+ + L D ++ +
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV+ F M K P + +FNKL+ + K E L ++M+ G+ DL +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L V +M +EPD+VT L+N YC +K+ +AV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY VV C +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +M++ + + Y+ I+ L K + +A ++F M ++ G P V TY ++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLIS 301
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K + +M+ I P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 470 PANLFSTL 477
+S+L
Sbjct: 362 DIFTYSSL 369
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 15/242 (6%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P V ++ L + C + + A G Y E+ L N L ++D+A++
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLSDIIKVDDAVDL 70
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ + P +N ++ A + + + ++M+ G+ + TY I ++ +
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A +V +M ++G EP + T +L +C +R+ +A+ DQM G P
Sbjct: 131 RSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
F LI L NK A QM+ G +P + T+ L G A+ K+
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 498 DK 499
+K
Sbjct: 250 EK 251
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 325 GFAPETPTYNAVVGAYCWS---------------------MRMDDAYRVVDEMKQCGVGP 363
G P P++ + G+ CW +++DDA + +M + P
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+ ++ +L + K + S+ +M + +G + TY I + FC +L + +AV
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQT-LGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+M G P + L++ CH+ ++ A QM+++G +P F+TL L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 162/320 (50%), Gaps = 9/320 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EAV ++M + G +P+V +N +V+ +C+S A +L KM R + D+ +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + + + +EM+ + + VVTY L+ CKA K+++ +M +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P+ F+ L++ + +L EA E Y++ G +P TYN ++ YC R+ +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++D M + P+ T+ ++ + + VFR +S G TY I+++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQ 411
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM----LDV 465
FC ++ + ++ +M + G+LP + + +L+ LC KL+ A + F+ + +D+
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 466 GIRPPANLFSTLKQALIDAG 485
GI +++T+ + + G
Sbjct: 472 GIV----MYTTIIEGMCKGG 487
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 187/380 (49%), Gaps = 20/380 (5%)
Query: 116 GFKHSTESFHALIEAL---GKIRQFKVIWN-LVEDMKQRKLLTRDTXXXXXXXXXXXXKV 171
G++ T +F+ LI+ L GK+ + V+ + +VE+ Q ++T ++
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG---DT 209
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ KME+ +K +V ++ ++D LC+ ++ A LF +M +G+ + +Y L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 232 LEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
+ G W+ LL+ + V RE+ P+V+T+ +L++ + K K EA Y E
Sbjct: 270 VRGLCKAGKWNDGALLLK-DMVSREIV-----PNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + + P+ ++TL++G RL EA + N +P+ T+ +++ YC R
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+DD +V + + G+ N+ TY I++ ++ + A +F+ M S G P V TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTYG 442
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I+L CD +L+ + +++ ++ + G+ ++ +I +C K++ A F +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 466 GIRPPANLFSTLKQALIDAG 485
G++P ++ + L G
Sbjct: 503 GVKPNVMTYTVMISGLCKKG 522
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 182/411 (44%), Gaps = 47/411 (11%)
Query: 91 AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN----LV 144
+ +++ L G + A+S F E KG K S ++++L+ L K + WN L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEME-TKGIKSSVVTYNSLVRGLCKAGK----WNDGALLL 286
Query: 145 EDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
+DM R+++ P V FN L+DV K
Sbjct: 287 KDMVSREIV----------------------------------PNVITFNVLLDVFVKEG 312
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
+++A EL+ +M RG+ P++ +Y L++G+ Q L N + M PD+VT+
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
LI YC K+ D+ + + + ++ ++ + +S L+ G ++ A E +++ ++
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
G P+ TY ++ C + +++ A + +++++ + Y I+ + K ++A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
+++F + + G +P V TY +++ C + L + +M G P + LI
Sbjct: 493 WNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFAL 495
A L A+ K ++M G A+ + L+ A M+ + + L
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA-MKRLTLRYCL 601
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 1/312 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A K+ K G +P+ + FN L+ L V +A L D+M G PD+ +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + ++ R+M+ + DV TY +I++ C+ D A+ + EM+ K +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S +++L+ GL + ++ + + P T+N ++ + ++ +A +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM G+ PN TY+ ++ EA ++ M C P + T+ +++ +C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCM 380
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+R+D M V+ + RG++ + +L+ C + K+ A + FQ+M+ G+ P
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 474 FSTLKQALIDAG 485
+ L L D G
Sbjct: 441 YGILLDGLCDNG 452
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 1/271 (0%)
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+ A LF +M +P L ++ ++ + V + C++++ ++ T I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN +C+ K A ++ + P F+TLI GL + ++ EA+ ++ NG
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
P+ TYN++V C S A ++ +M++ V + TY I+ L + A S
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
+F+ M ++ G + +V TY+ ++R C + + + M +R I+P + F VL+
Sbjct: 250 LFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
KL A + +++M+ GI P ++TL
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTL 339
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K D+A+ + EM +PS FS + + K+ + L+F ++ + NG A T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ +C + AY V+ ++ + G P++ T++ ++ L EA + RM E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VE 186
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
GC+P V TY+ I+ C + + + +M R + + + +I +LC +DA
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
A F++M GI+ +++L + L AG
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 200/434 (46%), Gaps = 16/434 (3%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALG 132
+++ L LS PE+V VL + LA+ FF+W +++ GF H ++ ++ G
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAG 200
Query: 133 KIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
+ R ++ LV +M ++ +D T K+ + + FEKM K G + +
Sbjct: 201 EARNLDMVDELVSEM-EKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA 259
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+ +N ++ LC + + A E + +M +G+ L++Y +LL+ ++ + + V + +
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 251 MK--CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
M CE E D +G L+ ++C + K EA+ E++ K M F L+ GL
Sbjct: 320 MVRICEISEHD--AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRA 377
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE---MKQCGVGPNS 365
R+ +ALE + K ++ Y ++ Y +R +D + +++ +K+ G P
Sbjct: 378 NRMVDALEIVDIMKRRKL-DDSNVYGIIISGY---LRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
TY I+ HL K + ++ ++F M E G EP ++ + R+ V+
Sbjct: 434 STYTEIMQHLFKLKQFEKGCNLFNEM-IENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
M +GI P + + + LC +++ D K F QM I ++FS + ++ G
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Query: 486 METTAIHFALKIDK 499
E IH +I K
Sbjct: 553 -EKEKIHLIKEIQK 565
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 198/451 (43%), Gaps = 46/451 (10%)
Query: 61 KICKILSKSPN-STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKH 119
+IC++LS S + AL +V+ +PELV EVL G L FF W K+ G+KH
Sbjct: 617 EICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKH 676
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXXXXXXXXXKVKEAVETF 178
++E+++ I+ G + FK + +L +M+++ L+T+DT A+ TF
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTF 736
Query: 179 EKMEKYGLKPEVSDFNKLVDVLC--KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
++M+ GL P S F L+ VLC K ++VE+A F +M G VPD + L
Sbjct: 737 KEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLC 796
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ N + + C + + P V Y I I A C+ K +EA+ + + + +
Sbjct: 797 EVGNT-KDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY 855
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ ++++GL L +AL+ V+ M
Sbjct: 856 TYGSIVHGLLQRGDLQKALD-----------------------------------KVNSM 880
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER 416
K+ G P Y ++ + K + ++ ++M E CEP+V TY ++ + +
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGE-SCEPSVVTYTAMICGYMSLGK 939
Query: 417 LDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFST 476
++ + M RG P + I+ LC A K + A K +MLD GI P ST
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP-----ST 994
Query: 477 LKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+ + G+ H +I +K+ LVA
Sbjct: 995 INFRTVFYGLNREGKHDLARIALQKKSALVA 1025
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 187/385 (48%), Gaps = 2/385 (0%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX 169
W ++ +++ +++ L + R+F +W + M R L+
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 170 KVKEAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+ E ++M G+KP V + + LC+ +E+A+++F+ M+ G++P+L +Y
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+ +++G+ + N+ + + +E+ P+VV +G L++ +CKA++ A + M +
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ ++++ LI+G + EA+ + ++ +P+ TY ++ C ++ +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A R+ +MK + P+S TY+ ++H K ++A + M++ G EP + T+ ++
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTLI 451
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
+C+ + M ++ +M +GI+P + + LI A + A + + ML+ GI
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 469 PPANLFSTLKQALIDAGMETTAIHF 493
P + F+ L G + AI F
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDF 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++EA + FE M+K+G+ P + ++ ++D CK+ +V +A L+ ++ L+P++ +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ + + L+ + M +P++ Y LI+ +CK+ EAVG EM+
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P ++ LINGL + ++ EA ++K K P + TYN+++ YC M+ A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EM GV PN T+ ++ R + A ++ M+ + G P V TY ++
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-GIVPDVVTYTALID 487
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
E + + ++ M GI P H F L+ +L A ++Q+
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 5/320 (1%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++ M GL P+V + L K K ++L D+M G+ P++ YTI + +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ ++ MK P++ TY +I+ YCK +A G Y E+ ++P+ +
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F TL++G + L A + G P YN ++ +C S M +A ++ EM+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ P+ TY I+++ L EA +F++M +E P+ +TY+ ++ +C E +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER-IFPSSATYNSLIHGYCKEYNM 425
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ + + +M A G+ P + F LI C+ + AA + +M GI P ++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT-- 483
Query: 478 KQALIDAGMETTAIHFALKI 497
ALIDA + + AL++
Sbjct: 484 --ALIDAHFKEANMKEALRL 501
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV +ME L P+V + L++ LC V +A LF KM++ + P +Y L+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ ++ N+ + ++C EM EP+++T+ LI+ YC + A+G Y EM K ++
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ LI+ + + EAL Y G P T+ +V + R+ A
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
E Q N + ++ L + A F M S G P + +Y +L+
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS-CGITPDICSYVSMLKGHL 595
Query: 413 DEERLDMEMAVWDQMRARGILPGMHV 438
E+R+ M + M GILP + V
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 1/296 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F M K+G+ P + +N L+ CKS ++ +A L +M L PD+ +YTIL+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + N + ++MK E P TY LI+ YCK ++A+ EM + P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ FSTLI+G + + + A+ Y + G P+ TY A++ A+ M +A R+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+M + G+ PN T+ ++ K A ++ + + C V + ++ C
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG-FTCLIEGLCQ 561
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ + MR+ GI P + + ++ ++ M+ GI P
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP 617
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 98/195 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++A++ +M G++P + F+ L+D C + ++ A L+ +M +G+VPD+ +YT
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ ++ N+ + +M P+ T+ L++ + K + A+ FY E ++
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ F+ LI GL + + A F+ ++ G P+ +Y +++ + R+ D
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 350 YRVVDEMKQCGVGPN 364
+ +M + G+ PN
Sbjct: 604 MMLQCDMIKTGILPN 618
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 6/246 (2%)
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ + +LI + + ++EA+ EM+ P +++NGL +R D Y+
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRM-DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ G P+ Y V+ C+ + +++DEM G+ PN Y I + L +
Sbjct: 189 LMISRGLVPDVHIY-FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
+EA +F M G P + TY ++ +C + ++ ++ +LP + V
Sbjct: 248 NKMEEAEKMFELMKKH-GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKID 498
F L+ C A +L A F M+ G+ P +++ L +G A+ +++
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 499 KLRKTP 504
L +P
Sbjct: 367 SLNLSP 372
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 179/399 (44%), Gaps = 9/399 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX-XXXX 162
ALS FH + + GF+H S+ +LI L K R F + ++ ++ R + R++
Sbjct: 65 ALSLFHQYQ-EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
V +A++ F K+ + + N L++VL + +EKA+ FD + L
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P+ S+ IL++G+ + + +V EM +P VVTY LI C+ +A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+M +K + P+ F L+ GL +EA + + G P Y ++
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
R+D+A ++ EMK+ + P+ Y+I+++HL EAY V M + GC+P +
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK-GCKPNAA 362
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
TY +++ FC E D + V + M A P F +++ L LD AC + M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 463 ----LDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
L G NL S L + D G+ A+ + I
Sbjct: 423 GKKNLSFGSGAWQNLLSDL--CIKDGGVYCEALSEVISI 459
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 142/307 (46%), Gaps = 3/307 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ F + ++ G + + ++ L+ L KS++ + ++ +R+R + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 232 LEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + ++ + +V ++ +C + + LIN + ++A F+ ++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ LI G + A + +++ P TYN+++G C + M A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++++M + + PN+ T+ +++ L EA + M GC+P + Y I++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-GCKPGLVNYGILMSD 300
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
R+D + +M+ R I P + ++ +L++ LC ++ A + +M G +P
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 471 ANLFSTL 477
A + +
Sbjct: 361 AATYRMM 367
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 192/414 (46%), Gaps = 7/414 (1%)
Query: 85 VSPE--LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
VSP+ L +N G + A+ F E + G + +F+ +I+ LG ++
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 141 WNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ E M +R + T T ++ +A ++M K G P V +N L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
++ S+ KA E+ D M +GL +Y L++G+ + + +EM F +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
++ +I C +D A+ F EM +NM P + +TLI+GL + +ALE +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+F GF +T T NA++ C + ++D+A+R+ E+ G + +Y+ ++ +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
EA+ M G +P TY I++ + +++ + WD + G+LP ++ +
Sbjct: 555 KLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
V+I C A + + ++F +M+ ++P +++ L +A +G + A+
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 153/316 (48%), Gaps = 17/316 (5%)
Query: 186 LKPEVSDFNKLVDVLC---KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
++ ++SD L++V C K A ++F + ++G+ P + ILL +L+
Sbjct: 186 IRRKMSDL--LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL------TSLV 237
Query: 243 RVNEVCR-----EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
R NE + ++ C+ PDV + INA+CK K +EAV + +M+E + P+
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+T+I+GLG R DEA F EK G P TY+ +V + R+ DAY V+ EM
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G PN Y+ ++ I+A + +A + M S+ G T STY+ +++ +C +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQA 416
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
D + +M + G F +I LC D+A ++ +ML + P L +TL
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 478 KQALIDAGMETTAIHF 493
L G + A+
Sbjct: 477 ISGLCKHGKHSKALEL 492
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 1/302 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+E + + G + N L+ LC++ +++A + ++ RG V D SY
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G ++ L EM +PD TY ILI K +EA+ F+ + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M+P + +S +I+G +R +E EF+++ + P T YN ++ AYC S R+ A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ ++MK G+ PNS TY ++ + +EA +F M E G EP V Y ++
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 723
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ ++ + +M ++ + P + V+I + A + +M + GI P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 470 PA 471
+
Sbjct: 784 DS 785
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+ P L+ LCK KA EL+ + ++G V D ++ LL G + L
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ +E+ D V+Y LI+ C KK DEA F EM ++ + P + +S LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
+ +++EA++F++ K NG P+ TY+ ++ C + R ++ DEM V PN+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMA 422
Y+ HLI+A S+ + +M G P +TY +++ R++
Sbjct: 646 VVYN----HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 423 VWDQMRARGILPGMHVFFVLISA 445
++++MR G+ P + + LI
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDG 724
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 35/356 (9%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++ E F+ + K G+ P+V F ++ CK VE+A +LF KM G+ P++ ++ +
Sbjct: 243 QKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTV 301
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G +M EP ++TY IL+ +AK+ +A EM +K
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +++ LI+ L++A+E + + G + + TYN ++ YC + + D+A R
Sbjct: 362 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 421
Query: 352 VVDEMKQCGVGPNSRTYDIIL-----HHLIKARTTQEAYSVFRRMSSEMGCEPTV----- 401
++ EM G N ++ ++ H + + + R MS G T+
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 402 ------------------------STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
T + +L C+ +LD + ++ RG +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ LIS C KLD A + +M+ G++P +S L L + AI F
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 172/394 (43%), Gaps = 7/394 (1%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++ L+ A + ++F E +KGF + ++ LI++ + + + M +
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 152 L-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L LT T + A ++M G F ++ +LC + A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+M R + P T L+ G + + E+ + + F D T L++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A K DEA E+ + + ++TLI+G K+LDEA F ++ G P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRR 390
TY+ ++ ++++A + D+ K+ G+ P+ TY +++ KA T+E F
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 391 MSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
M S+ +P Y+ ++R +C RL M + + + M+ +GI P + LI + +
Sbjct: 636 MMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 451 KLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+++ A F++M G+ P N+F ALID
Sbjct: 695 RVEEAKLLFEEMRMEGLEP--NVFHY--TALIDG 724
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+L+ L AG L +F E +G S++ LI ++ + +++M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 152 LLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L + T KV+EA++ ++ ++ G+ P+V ++ ++D CK++ E+ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
E FD+M + + P+ Y L+ + + L E+ +MK + P+ TY LI
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
+ +EA + EM+ + + P+ ++ LI+G G ++ + + + P
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
TY ++G Y + +A R+++EM++ G+ P+S TY ++ +K EA+
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
++G K ++ LI L + + + +D K+ +L T + +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F++M ++P +N L+ C+S + A EL + M+H+G+ P+ +YT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G S + + EM+ E EP+V Y LI+ Y K + + EM KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I G D + EA + + G P++ TY + Y + +A++
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 353 VDE 355
DE
Sbjct: 808 SDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 192/414 (46%), Gaps = 7/414 (1%)
Query: 85 VSPE--LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
VSP+ L +N G + A+ F E + G + +F+ +I+ LG ++
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 141 WNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ E M +R + T T ++ +A ++M K G P V +N L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
++ S+ KA E+ D M +GL +Y L++G+ + + +EM F +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
++ +I C +D A+ F EM +NM P + +TLI+GL + +ALE +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+F GF +T T NA++ C + ++D+A+R+ E+ G + +Y+ ++ +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
EA+ M G +P TY I++ + +++ + WD + G+LP ++ +
Sbjct: 555 KLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
V+I C A + + ++F +M+ ++P +++ L +A +G + A+
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 153/316 (48%), Gaps = 17/316 (5%)
Query: 186 LKPEVSDFNKLVDVLC---KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
++ ++SD L++V C K A ++F + ++G+ P + ILL +L+
Sbjct: 186 IRRKMSDL--LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL------TSLV 237
Query: 243 RVNEVCR-----EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
R NE + ++ C+ PDV + INA+CK K +EAV + +M+E + P+
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+T+I+GLG R DEA F EK G P TY+ +V + R+ DAY V+ EM
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G PN Y+ ++ I+A + +A + M S+ G T STY+ +++ +C +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQA 416
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
D + +M + G F +I LC D+A ++ +ML + P L +TL
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 478 KQALIDAGMETTAIHF 493
L G + A+
Sbjct: 477 ISGLCKHGKHSKALEL 492
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 1/302 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+E + + G + N L+ LC++ +++A + ++ RG V D SY
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G ++ L EM +PD TY ILI K +EA+ F+ + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M+P + +S +I+G +R +E EF+++ + P T YN ++ AYC S R+ A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ ++MK G+ PNS TY ++ + +EA +F M E G EP V Y ++
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALID 723
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ ++ + +M ++ + P + V+I + A + +M + GI P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 470 PA 471
+
Sbjct: 784 DS 785
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+ P L+ LCK KA EL+ + ++G V D ++ LL G + L
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ +E+ D V+Y LI+ C KK DEA F EM ++ + P + +S LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
+ +++EA++F++ K NG P+ TY+ ++ C + R ++ DEM V PN+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMA 422
Y+ HLI+A S+ + +M G P +TY +++ R++
Sbjct: 646 VVYN----HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 423 VWDQMRARGILPGMHVFFVLISA 445
++++MR G+ P + + LI
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDG 724
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 35/356 (9%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++ E F+ + K G+ P+V F ++ CK VE+A +LF KM G+ P++ ++ +
Sbjct: 243 QKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTV 301
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G +M EP ++TY IL+ +AK+ +A EM +K
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +++ LI+ L++A+E + + G + + TYN ++ YC + + D+A R
Sbjct: 362 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 421
Query: 352 VVDEMKQCGVGPNSRTYDIIL-----HHLIKARTTQEAYSVFRRMSSEMGCEPTV----- 401
++ EM G N ++ ++ H + + + R MS G T+
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 402 ------------------------STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
T + +L C+ +LD + ++ RG +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ LIS C KLD A + +M+ G++P +S L L + AI F
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 172/394 (43%), Gaps = 7/394 (1%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++ L+ A + ++F E +KGF + ++ LI++ + + + M +
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 152 L-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L LT T + A ++M G F ++ +LC + A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+M R + P T L+ G + + E+ + + F D T L++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A K DEA E+ + + ++TLI+G K+LDEA F ++ G P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRR 390
TY+ ++ ++++A + D+ K+ G+ P+ TY +++ KA T+E F
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 391 MSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
M S+ +P Y+ ++R +C RL M + + + M+ +GI P + LI + +
Sbjct: 636 MMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 451 KLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+++ A F++M G+ P N+F ALID
Sbjct: 695 RVEEAKLLFEEMRMEGLEP--NVFHY--TALIDG 724
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+L+ L AG L +F E +G S++ LI ++ + +++M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 152 LLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L + T KV+EA++ ++ ++ G+ P+V ++ ++D CK++ E+ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
E FD+M + + P+ Y L+ + + L E+ +MK + P+ TY LI
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
+ +EA + EM+ + + P+ ++ LI+G G ++ + + + P
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
TY ++G Y + +A R+++EM++ G+ P+S TY ++ +K EA+
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
++G K ++ LI L + + + +D K+ +L T + +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F++M ++P +N L+ C+S + A EL + M+H+G+ P+ +YT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G S + + EM+ E EP+V Y LI+ Y K + + EM KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I G D + EA + + G P++ TY + Y + +A++
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 353 VDE 355
DE
Sbjct: 808 SDE 810
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 164/371 (44%), Gaps = 2/371 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE-A 174
G ++ LI+ L K R LV +M + + V E A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
F+ M GL P+ + L++ C+ K+V + EL +M+ R +V +Y +++G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+L + +EM P+VV Y LI + + ++ +A+ EM+E+ + P
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+++LI GL KR+DEA F + NG P TY A + Y + A + V
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
EM++CGV PN +++ K EA S +R M + G TY +++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKN 605
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
+++D ++ +MR +GI P + + VLI+ + A F +M++ G+ P ++
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 475 STLKQALIDAG 485
+ L +G
Sbjct: 666 NMLLGGFCRSG 676
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 146/291 (50%), Gaps = 3/291 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A+ ++M++ G+ P++ +N L+ L K+K +++A+ +M GL P+ +Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+ G+ + ++ +EM+ EC P+ V LIN YCK K EA Y M +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ ++ ++ L+NGL + ++D+A E + + + G AP+ +Y ++ + M
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + DEM + G+ PN Y+++L ++ ++A + MS + G P TY I+
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTII 704
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+C L ++D+M+ +G++P V+ L+ C N ++ A F
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 179/384 (46%), Gaps = 9/384 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ G K + ++ A I + +F V++M++ +L + KV
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + M G+ + + L++ L K+ V+ A+E+F +MR +G+ PD+ SY +L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+S+ N+ + + + EM E P+V+ Y +L+ +C++ + ++A EM K +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ + T+I+G L EA +++ K G P++ Y +V C R++D R
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERA 751
Query: 353 VD--EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM---SSEMGCEPTVSTYDII 407
+ + G ++ ++ +++ + K T+ V R+ S + +P TY+I+
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ C E L+ ++ QM+ ++P + + L++ + F + + GI
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 468 RPPANLFSTLKQALIDAGMETTAI 491
P ++S + A + GM T A+
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKAL 895
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 165/363 (45%), Gaps = 2/363 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G +++ +LIE + + + + L+ +MK+R ++ T + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
++M G +P V + L+ ++ A + +M+ +G+ PD+ Y L+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
S+ + + EM +P+ TYG I+ Y +A ++ A + EM+E ++P+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ + LIN ++ EA Y G + TY ++ + ++DDA +
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
EM+ G+ P+ +Y ++++ K Q+A S+F M E G P V Y+++L FC
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRS 675
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
++ + D+M +G+ P + +I C + L A + F +M G+ P + ++
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 475 STL 477
+TL
Sbjct: 736 TTL 738
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 12/301 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +A E F +M G+ P+V + L++ K +++KA +FD+M GL P++ Y
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+LL G+ + + + E+ EM + P+ VTY +I+ YCK+ EA + EM+ K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW------- 342
++P +++TL++G ++ A+ + K G A T +NA++ W
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN---WVFKFGKT 782
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
++ + R++D PN TY+I++ +L K + A +F +M + PTV
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVI 841
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
TY +L + R V+D+ A GI P ++ V+I+A A QM
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 463 L 463
Sbjct: 902 F 902
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 195/483 (40%), Gaps = 78/483 (16%)
Query: 79 ADLSVEVSPELVAEVL-NKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
++LS+E++PE+V VL +K + LSFF+W + QK + +SF L L F
Sbjct: 54 SNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113
Query: 138 KVIWNLVEDMKQRKL--------LTR----------DTXXXXXXXXXXXXK--VKEAVET 177
+ ++VE M +R + R D K ++EAV
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F L P +S L+D L + ++ +++ M R +V D+K+Y +L+ +
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 238 QQNL------------------LRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKY 276
N+ L V+ + M C+ P TY +LI+ CK K+
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD------------------------ 312
++A EM + H +S LI+GL + D
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 313 -----------EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+A ++ A+G P+ Y +++ YC + Y ++ EMK+ +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
+ TY ++ + + AY++ + M + GC P V Y +++ F R M
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
V +M+ +GI P + + LI L A ++D A + +M++ G++P A +
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 482 IDA 484
I+A
Sbjct: 533 IEA 535
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 1/307 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A++ E M GL P ++ L+D LCK K +E A+ L +M G+ D +Y++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + +N + EM Y I K ++A + M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P +++LI G +K + + E + K TY VV C S +D AY
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+V EM G PN Y ++ ++ +A V + M E G P + Y+ ++
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIG 496
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+R+D + +M G+ P + IS A++ +A KY ++M + G+ P
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 471 ANLFSTL 477
L + L
Sbjct: 557 KVLCTGL 563
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+++G KP +N ++D LCK ++E A+ELF +M++ L+P + +YT LL G+ +
Sbjct: 798 DRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS-- 299
+ V E EPD + Y ++INA+ K +A+ +M KN + S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 300 ---TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
L++G ++ A + E + P++ T ++ C S
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF------------------- 213
EA F++M+ GL P+ + LVD C+ VE+A +F
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 214 -------------------DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCE 254
D R P+ +Y I+++ ++ NL E+ +M+
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
P V+TY L+N Y K + E + E + P ++S +IN + +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 315 LEFYEKFKA-----NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY- 368
L ++ A +G T A++ + M+ A +V++ M + P+S T
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Query: 369 DIILHHLIKARTTQEAYSV 387
++I I + EA +V
Sbjct: 955 ELINESCISSNQRVEADAV 973
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 1/314 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+ + F+++++ G P V + L+++ K + KA E+ M+ G+ +LK+Y+++
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G+ + ++ V +M E +PDV+ Y +I+A+C D A+ EMQ+
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ F +I+G + +LE ++ + G P T+N ++ +M+ A
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++DEM GV N TY I+ T +A+ F R+ +E G + + TY+ +L+
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE-GLDVDIFTYEALLKAC 704
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C R+ +AV +M AR I V+ +LI + A QQM G++P
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 764
Query: 472 NLFSTLKQALIDAG 485
+ +++ A AG
Sbjct: 765 HTYTSFISACSKAG 778
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 143/301 (47%), Gaps = 1/301 (0%)
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
S + K++ C++ ++E+A+ L +M G+ + Y +++G++ + + V +
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
+K F P VVTYG LIN Y K K +A+ M+E+ + + +S +ING K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
A +E G P+ YN ++ A+C MD A + V EM++ P +RT+
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
I+H K+ + + VF M GC PTV T++ ++ ++ +++ + + D+M
Sbjct: 595 IIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
G+ H + ++ A +YF ++ + G+ + L +A +G +A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 491 I 491
+
Sbjct: 714 L 714
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 125/238 (52%), Gaps = 1/238 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ ++E F+ M + G P V FN L++ L + + +EKA E+ D+M G+ + +YT
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G++ + + E ++ E + D+ TY L+ A CK+ + A+ EM +N
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ + +++ LI+G + EA + ++ K G P+ TY + + A + M+ A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+ ++EM+ GV PN +TY ++ +A ++A S + M + MG +P + Y +L
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA-MGIKPDKAVYHCLL 841
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 40/344 (11%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ FEK+ K P ++F +V + + +A+E F++MR RG+ P + YT L+
Sbjct: 298 ISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK-------YDEA-------- 279
++ +++ R+MK E E +VTY +++ + KA +DEA
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 280 ------VGFYH--------------EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ + H EM+E+ + I+ T+++G + L ++
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+ K GF P TY ++ Y ++ A V MK+ GV N +TY ++++ +K +
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
A++VF M E G +P V Y+ I+ FC +D + +M+ P F
Sbjct: 534 DWANAFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+I + + + + F M G P + F+ L L++
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 58/362 (16%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL---FDKMRHRGLVPDLKSYTI 230
A FE M K G+KP+V +N ++ C ++++A + K+RHR P +++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR---PTTRTFMP 594
Query: 231 LLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+++ ++ R EV M+ C C P V T+ LIN + ++ ++AV EM
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + H ++ ++ G S +A E++ + + G + TY A++ A C S RM A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE--------------- 394
V EM + NS Y+I++ + EA + ++M E
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 395 -------------------MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+G +P + TY +++ + + ++ +++M+A GI P
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM---ETTAIH 492
V+ L+++L + A Y M T+ + +++AG+ TA+H
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVM-------------TICKEMVEAGLIVDMGTAVH 880
Query: 493 FA 494
++
Sbjct: 881 WS 882
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 1/282 (0%)
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P + ++++ + ++ ++ R E M+ P Y LI+AY + DEA+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+M+E+ + S +S ++ G + A ++++ K Y ++ A+C
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ M+ A +V EM++ G+ Y ++ ++ VF+R+ E G PTV
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK-ECGFTPTVV 485
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
TY ++ L+ ++ + V M+ G+ + + ++I+ A F+ M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 463 LDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ G++P L++ + A G AI ++ KLR P
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETF 178
+ +F+ LI L + RQ + ++++M + + T +A E F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+++ GL ++ + L+ CKS ++ A + +M R + + Y IL++GW+++
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
++ ++ ++MK E +PD+ TY I+A KA + A EM+ + P+ +
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+TLI G ++AL YE+ KA G P+ Y+ ++ + + +AY M
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTI 862
Query: 359 C 359
C
Sbjct: 863 C 863
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 205/430 (47%), Gaps = 47/430 (10%)
Query: 61 KICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS 120
+I KI P++ + AL L ++V LV +L V + FF WA K++ F+H
Sbjct: 69 RIVKIFKWGPDA--EKALEVLKLKVDHRLVRSILEIDVEINV-KIQFFKWAGKRRNFQHD 125
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEK 180
++ LI L + R + ++ +++ + R+T
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQE------VVRNTYV--------------------- 158
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+ P V ++LV L ++K V KA +F + + R P +Y ++ Q+
Sbjct: 159 ----SVSPAV--LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 241 LLRVNEVCREM--KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+V+EV EM + +CF PD +TY LI++Y K + D A+ + EM++ M P+ I+
Sbjct: 213 HEKVHEVYTEMCNEGDCF-PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIY 271
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+TL+ ++++AL+ +E+ K G +P TY ++ + R+D+AY +M +
Sbjct: 272 TTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG---CEPTVSTYDIILRLFCDEE 415
G+ P+ + +++ L K +E +VF SEMG C PTV +Y+ +++ + +
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVF----SEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 416 RLDMEMAVW-DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
E++ W D+M+A + P + +LI C N+++ A ++M + G P +
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 475 STLKQALIDA 484
+L AL A
Sbjct: 448 CSLINALGKA 457
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 156/313 (49%), Gaps = 2/313 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA ++ M + GL P+V N L+++L K VE+ +F +M P + SY
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 230 ILLEG-WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+++ + + ++ V+ +MK + P TY ILI+ YCK + ++A+ EM E
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K P P + +LIN LG KR + A E +++ K N + Y ++ + ++ +
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + +EMK G GP+ Y+ ++ ++KA EA S+ R+M E GC +++++IIL
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM-EENGCRADINSHNIIL 556
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
F + +++ ++ GI P + L+ HA + A + ++M D G
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 469 PPANLFSTLKQAL 481
A +S++ A+
Sbjct: 617 YDAITYSSILDAV 629
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVK 172
+KGF ++ +LI ALGK ++++ L +++K+ ++ K+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV+ F +M+ G P+V +N L+ + K+ + +A L KM G D+ S+ I+L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+++ R E+ +K +PD VTY L+ + A ++EA EM++K
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 293 PSPHIFSTLINGLGS-DKRLDEALEF 317
+S++++ +G+ D D+ F
Sbjct: 617 YDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE--KN--MMPSPHIFSTLINGLGSDKRL 311
F+ D TY LI +A+ Y E Y +QE +N + SP + S L+ LG K +
Sbjct: 122 FQHDCSTYMTLIRCLEEARLYGE---MYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMV 178
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+AL + ++A G ++C P S TY+ +
Sbjct: 179 SKALSVF--YQAKG-------------------------------RKCK--PTSSTYNSV 203
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+ L++ ++ + V+ M +E C P TY ++ + R D + ++D+M+
Sbjct: 204 ILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
+ P ++ L+ K++ A F++M G P ++ L + L AG A
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 492 HF 493
F
Sbjct: 324 GF 325
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 168/369 (45%), Gaps = 7/369 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VK 172
Q+G + ++ ++ L K + NL+ M+ ++ + V+
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
AV+ F +ME G++P V +N L++ LC A L M + + P++ ++ L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L+ ++ EM +PD +TY +LIN +C + DEA + M K+ +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TLING KR+++ +E + + G T TY ++ + + D A V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLF 411
+M V + TY I+LH L A +F+ + SEM E + Y+ ++
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM--ELNIFIYNTMIEGM 513
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C ++ WD + I P + + +IS LC L A F++M + G P +
Sbjct: 514 CKAGKVG---EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 472 NLFSTLKQA 480
++TL +A
Sbjct: 571 GTYNTLIRA 579
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV+ F M K P + +FNKL+ + K E L ++M+ G+ DL +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L V +M +EPD+VT L+N YC +K+ +AV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY VV C +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M+ + N ++ I+ L K R + A +F M ++ G P V TY+ ++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK-GIRPNVVTYNSLIN 301
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M + I P + F LI A KL A K ++M+ I P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 470 PANLFSTL 477
++ L
Sbjct: 362 DTITYNLL 369
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 160/324 (49%), Gaps = 5/324 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ ++ + +M+ + +VV + +I++ CK + + AV + EM+ K
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +++LIN L + R +A P T+NA++ A+ ++ +A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +EM Q + P++ TY+++++ EA +F+ M S+ C P + TY+ ++
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNTLIN 406
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R++ + ++ +M RG++ + +I A D+A F+QM V R
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM--VSNRV 464
Query: 470 PANL--FSTLKQALIDAGMETTAI 491
P ++ +S L L G TA+
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTAL 488
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EAV ++M + G +P++ + +V+ LCK ++ A L +KM + ++ +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + +++ ++ EM+ + P+VVTY LIN C ++ +A M EK
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ F+ LI+ + +L EA + +E+ P+T TYN ++ +C R+D+A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ M PN +TY+ +++ K + ++ +FR M S+ G TY I++
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQ 441
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
F D V+ QM + + + + +L+ LC KLD A F+ + +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 470 PANLFSTLKQALIDAG 485
+++T+ + + AG
Sbjct: 502 NIFIYNTMIEGMCKAG 517
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 148/358 (41%), Gaps = 49/358 (13%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLA--------LSFFHWAEKQKGFKHSTE 122
N+ ID+ VEV+ +L E+ K V+ ++ W++ + + E
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 123 --------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+F+ALI+A K + L E+M QR + T ++ E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F+ M P + +N L++ CK K VE ELF +M RGLV + +YT +++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM-- 291
G+ Q + V ++M D++TY IL++ C K D A+ + +Q+ M
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 292 ------------------------------MPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
P ++T+I+GL S + L EA + + K
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
K +G P + TYN ++ A + ++ EM+ G ++ T ++ + L R
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 15/244 (6%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P V ++ L + C + + A G Y E+ L N L ++D+A++
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLSDIIKVDDAVDL 70
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ + P +N ++ A + + + ++M+ G+ + TY I ++ +
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A +V +M ++G EP + T +L +C +R+ +A+ DQM G P
Sbjct: 131 RSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
F LI L NK A QM+ G +P + T+ L G A++ K+
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 498 DKLR 501
+ R
Sbjct: 250 EAAR 253
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 325 GFAPETPTYNAVVGAYCWS---------------------MRMDDAYRVVDEMKQCGVGP 363
G P P++ + G+ CW +++DDA + +M + P
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+ ++ +L + K + S+ +M + +G + TY I + FC +L + +AV
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQT-LGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+M G P + L++ CH+ ++ A QM+++G +P F+TL L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 173/371 (46%), Gaps = 3/371 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEA 174
+GF ++ L+ L KI + +L + + +++ +T K
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + + YG+ P+V +N L+ K V A E+ MR++G P++ SYTIL++G
Sbjct: 376 LS--DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + V EM + +P+ V + LI+A+CK + EAV + EM K P
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ F++LI+GL + AL + G T TYN ++ A+ + +A ++V+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
EM G + TY+ ++ L +A +A S+F +M + G P+ + +I++ C
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRS 612
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
++ + +M RG P + F LI+ LC A +++ F+++ GI P F
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 475 STLKQALIDAG 485
+TL L G
Sbjct: 673 NTLMSWLCKGG 683
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 35/415 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
++ F W Q G++HS + + LI LG +FK I L+ MK ++ +++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 164 XXXXXXKVKEAVE--TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
E Y +P +N ++++L + A +F M R +
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P L ++ ++++ + + + R+M P+ V Y LI++ K + +EA+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY-------- 333
EM +P F+ +I GL R++EA + + GFAP+ TY
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 334 -----------------------NAVVGAYCWSMRMDDAYRVVDEM-KQCGVGPNSRTYD 369
N ++ + R+DDA V+ +M G+ P+ TY+
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRA 429
+++ K A V M ++ GC+P V +Y I++ FC ++D V ++M A
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 430 RGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
G+ P F LISA C +++ A + F++M G +P F++L L +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/562 (21%), Positives = 220/562 (39%), Gaps = 90/562 (16%)
Query: 28 LTPLSTSPTIKLPQNLSGSLRIHTLIPHTP---HADKICKIL-----SKSPNSTIDAALA 79
+TP ++LP N+S S+ + + H+ + ++L + TID L
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 80 ---DLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF--KHSTESFHALIEALGKI 134
D + L ++ AG + E + + + + +S++ ++E L
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195
Query: 135 RQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
KV N+ DM RK+ T T ++ A+ M K+G P +
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
L+ L K V +A +L ++M G VPD +++ ++ G + + ++ M
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
F PD +TYG L+N CK + D A ++ + + P IF+TLI+G + RLD+
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDD 371
Query: 314 A------------------------------------LEFYEKFKANGFAPETPTYNAVV 337
A LE + G P +Y +V
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC 397
+C ++D+AY V++EM G+ PN+ ++ ++ K EA +FR M + GC
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GC 490
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA------------ 445
+P V T++ ++ C+ + + + + M + G++ + LI+A
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 446 -----------------------LCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
LC A ++D A F++ML G P + L L
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 483 DAGMETTAIHFALKIDKLRKTP 504
+GM A+ F ++ TP
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTP 632
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 3/317 (0%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXX 162
LAL H + KG K + S+ L++ K+ + +N++ +M L
Sbjct: 407 LALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 163 XXXX-XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
++ EAVE F +M + G KP+V FN L+ LC+ ++ A L M G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
V + +Y L+ + ++ + ++ EM + D +TY LI C+A + D+A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ +M PS + LINGL ++EA+EF ++ G P+ T+N+++ C
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
+ R++D + +++ G+ P++ T++ ++ L K +A + E G P
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE-GIEDGFVPNH 704
Query: 402 STYDIILRLFCDEERLD 418
T+ I+L+ +E LD
Sbjct: 705 RTWSILLQSIIPQETLD 721
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 13/292 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KME ++ V ++ ++D LCK + + A LF +M ++G+ P++ +Y+ L+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 234 G------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
WS LL +M P++VT+ LI+A+ K K +A Y EM
Sbjct: 297 CLCNYGRWSDASRLLS------DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++++ P+ +S+LING RL EA + E P TYN ++ +C + R+D
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
+ EM Q G+ N+ TY ++H +AR A VF++M S +G P + TY+I+
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNIL 469
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
L C +L M V++ ++ + P ++ + ++I +C A K YF
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ + + +M+ E +VV Y +I++ CK + D+A+ + EM+ K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L + R +A P T++A++ A+ ++ A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +EM + + PN TY +++ EA + M + C P V TY+ ++
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK-DCLPNVVTYNTLIN 401
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +R+D M ++ +M RG++ + LI A D A F+QM+ VG+ P
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461
Query: 470 PANLFSTLKQALIDAG 485
++ L L G
Sbjct: 462 NILTYNILLDGLCKNG 477
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
Q+G + ++ A++ L K + NL+ M+ K+ + ++
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 174 -AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ F +ME G++P V ++ L+ LC A L M R + P+L +++ L+
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L++ ++ EM +P++ TY LIN +C + EA M K+ +
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TLING KR+D+ +E + + G T TY ++ + + D+A V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+M GV PN TY+I+L L K +A VF + EP + TY+I++ C
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMC 509
Query: 413 DEERLDM 419
+ M
Sbjct: 510 KAGKWKM 516
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A+ F M + P + +F+KL+ + K + +KM G+ +L +Y
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L + +M +EPD+VT L+N +C + +AV +M E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY AVV C D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++++M+ + N Y ++ L K R +A ++F M ++ G P V TY ++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLIS 296
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ R + M R I P + F LI A KL A K +++M+ I P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 470 PANLFSTL 477
+S+L
Sbjct: 357 NIFTYSSL 364
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 162/347 (46%), Gaps = 24/347 (6%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P+LV V+N
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAV--------------ALIDRMVQRGCQPDLVTYGAVVN 226
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LAL+ + E K + + + +I++L K R NL +M+ + +
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P + F+ L+D K + KA++L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYC 271
+++M R + P++ +Y+ L+ G+ L ++ M + +C P+VVTY LIN +C
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PNVVTYNTLINGFC 404
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ D+ + + EM ++ ++ + ++TLI+G + D A +++ + G P
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
TYN ++ C + ++ A V + +++ + P+ TY+I++ + KA
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 206 VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
++ A LF M P + ++ LL ++ V +M+ ++ TY I
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
LIN +C+ + A+ +M + P ++L+NG R+ +A+ ++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
+ P+T T+ ++ + +A ++D M Q G P+ TY +++ L K T A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 386 SVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
++ +M + E V Y ++ C D + ++ +M +G+ P + + LIS
Sbjct: 239 NLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 446 LCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
LC+ + A + M++ I P FS L A + G
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
D+A+G + M + PS FS L++ + + D + F EK + G + TYN +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ +C R+ A ++ +M + G P+ T + +L+ +A ++ +M EMG
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV-EMG 178
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
+P T+ ++ + +A+ D+M RG P + + +++ LC D A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 457 KYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+M I ++ST+ +L E A++
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
SD LD+A+ + + P ++ ++ A + D ++M+ G+ N
Sbjct: 55 SDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLY 114
Query: 367 TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
TY+I+++ + A ++ +M ++G EP + T + +L FC R+ +A+ DQ
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 427 MRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
M G P F LI L NK A +M+ G +P + + L G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 487 ETTAIHFALKID 498
A++ K++
Sbjct: 234 TDLALNLLNKME 245
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A+ KME+ +KP+V ++ ++D LCK AQ LF +M +G+ P++ +Y +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 232 LEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
++G WS Q LLR + + RE+ PDV+T+ LI+A K K EA E
Sbjct: 338 IDGFCSFGRWSDAQRLLR-DMIEREIN-----PDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + + P ++++I G R D+A ++ +P+ T+N ++ YC + R
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+D+ +++ E+ + G+ N+ TY+ ++H + A +F+ M S C T+ T +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI-TCN 506
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I+L FC+ E+L+ + +++ ++ I + ++I +C +K+D A F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 466 GIRPPANLFSTL------KQALIDAGM 486
G+ P ++ + K A+ DA +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANV 593
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 149/297 (50%), Gaps = 5/297 (1%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV F++M + GL P V FN L++ LC V +A L +KM +GL D+ +Y ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + + +M+ +PDVV Y +I+ CK + +A + EM EK +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I+G S R +A P+ T+NA++ A ++ +A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
DEM + P++ TY+ +++ K +A +F M+S P V T++ I+ ++C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVYC 443
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+R+D M + ++ RG++ + LI C + L+AA FQ+M+ G+ P
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 13/297 (4%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
SF W++ Q+ + E +F+ALI A K + L ++M R +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T + +A F+ M P+V FN ++DV C++K V++ +L ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
RGLV + +Y L+ G+ + NL ++ +EM PD +T IL+ +C+ +K
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+EA+ + +Q + ++ +I+G+ ++DEA + + +G P+ TYN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
+ +C + DA + +MK G P++ TY+ ++ +KA ++ + M S
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
R+M+ ++ ++ ILI +C K ++ + ++ + P F+TL++GL +
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189
Query: 309 KRLDEALEFYEKFKANGF---------------APETPTYNAVVGAYCWSMRMDDAYRVV 353
R+ EAL + GF P T+N ++ C R+ +A +V
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
++M G+ + TY I++ + K T+ A ++ +M E +P V Y I+ C
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCK 308
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ ++ +M +GI P + + +I C + A + + M++ I P
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 474 FSTLKQALIDAG 485
F+ L A + G
Sbjct: 369 FNALISASVKEG 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
+I + + + D A+ Y +M+ + + + + F+ LI +L +L + K G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
F P+ T+N ++ C R+ +A + M + G EA
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF--------------------LEAV 211
Query: 386 SVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
++F +M E+G P V T++ ++ C E R+ A+ ++M +G+ + + +++
Sbjct: 212 ALFDQM-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 446 LCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+C +A +M + I+P ++S + L G + A
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
K LD+A++F++ + N V+G + R D A + +M+ + N ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW---- 424
+I++ + S F +++ ++G +P V T++ +L C E+R+ +A++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 425 -----------DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
DQM G+ P + F LI+ LC ++ A +M+ G+
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+ T+ + G +A++ K+++ P V
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 174/366 (47%), Gaps = 5/366 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
K+KGF TE+ + ++ L ++ + + W DM + ++ + T K+
Sbjct: 182 KEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKL 241
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+A ME +G+KP + +N LV +E A+ + +M+ +G PD+++Y +
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI 301
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L W + R +EV REMK PD V+Y ILI + A + EM ++ M
Sbjct: 302 L-SWMCNEG--RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ + ++TLI+GL + +++ A + + G ++ TYN ++ YC A+
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ DEM G+ P TY +++ L + T+EA +F ++ + G +P + + ++
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGH 477
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C +D ++ +M I P + L+ LC K + A + +M GI+P
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 472 NLFSTL 477
++TL
Sbjct: 538 ISYNTL 543
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 1/308 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E +M++ GL P+ +N L+ + +E A D+M +G+VP +Y L+
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + RE++ + D VTY ILIN YC+ +A + EM + P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +++LI L + EA E +EK G P+ N ++ +C MD A+ ++
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM + P+ TY+ ++ L +EA + M G +P +Y+ ++ +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR-GIKPDHISYNTLISGYSK 549
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ V D+M + G P + + L+ L + + A + ++M GI P +
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Query: 474 FSTLKQAL 481
F ++ +A+
Sbjct: 610 FCSVIEAM 617
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 4/334 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA+E F M++ G P+ N ++ +L + +E A + M + ++ ++ I
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ ++ L + M+ +P +VTY L+ + + + A EM+ K
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P ++ +++ + ++ R E L + K G P++ +YN ++ + ++ A+
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
DEM + G+ P TY+ ++H L EA + R E G TY+I++
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKI-EAAEILIREIREKGIVLDSVTYNILING 406
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+C A+ D+M GI P + LI LC NK A + F++++ G++P
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 471 ANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ +TL G A ++D + P
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 98 SNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTR 155
SN G L ++F + E K G + +++ LI L + + L+ +++++ + L
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T K+A ++M G++P + L+ VLC+ +A ELF+K
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ +G+ PDL L++G N+ R + +EM PD VTY L+ C K
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
++EA EM+ + + P ++TLI+G A ++ + GF P TYNA
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
++ + + A ++ EMK G+ PN ++
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 113 KQKGFKHSTESFHALIEAL---GK----IRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX 165
K KGF+ ++++ ++ + G+ +R+ K I LV D +L R
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI-GLVPDSVSYNILIRGCSNNG---- 341
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
++ A ++M K G+ P +N L+ L +E A+ L ++R +G+V D
Sbjct: 342 ----DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 226 KSYTILLEGWSQQQNLLR-----------------------VNEVCREMKC----ECFE- 257
+Y IL+ G+ Q + + + +CR+ K E FE
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 258 -------PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
PD+V L++ +C D A EM ++ P ++ L+ GL + +
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
+EA E + K G P+ +YN ++ Y A+ V DEM G P TY+
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+L L K + + A + R M SE G P S++
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSE-GIVPNDSSF 610
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP----HI------------------- 297
+ + +L+ C+ + DEA+ ++ M+EK P HI
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 298 ------------FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
F+ +IN L + +L +A F + G P TYN +V + R
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
++ A ++ EMK G P+ +TY+ IL + E V R M E+G P +Y+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREM-KEIGLVPDSVSYN 331
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I++R + L+M A D+M +G++P + + LI L NK++AA +++ +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 466 GIRPPANLFSTLKQALIDAG--METTAIHFALKIDKLRKT 503
GI + ++ L G + A+H + D ++ T
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EA E FEK+ G+KP++ N L+D C ++++A L +M + PD +Y
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + E+ EMK +PD ++Y LI+ Y K A EM
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
P+ ++ L+ GL ++ + A E + K+ G P ++ +V+ A
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A ++M+ + P+ +N L+ LC E+A+EL +M+ RG+ PD SY L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+S++ + V EM F P ++TY L+ K ++ + A EM+ + ++P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 294 SPHIFSTLINGLGS 307
+ F ++I + +
Sbjct: 606 NDSSFCSVIEAMSN 619
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 20/423 (4%)
Query: 90 VAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF------------ 137
V E+L + L L FF++ +GF HST SF LI AL K F
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132
Query: 138 -----KVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEV 190
++N++ ++ KL + + +V + V F+ M K L PEV
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEV 192
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+ L+ L K + A ELF+ M G+ PD+ YT ++ + ++L R E+
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
M+ + ++V Y +LI+ CK +K EAVG ++ K++ P + TL+ GL +
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
+ LE ++ F+P +++V ++++A +V + GV PN Y+
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
++ L K R EA +F RM ++G P TY I++ +FC +LD ++ +M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
G+ ++ + LI+ C + AA + +M++ + P +++L G A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 491 IHF 493
+
Sbjct: 492 LRL 494
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 41/419 (9%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
K K ++ L+ L K+++F++ ++++M + + K++E
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +++ +G+ P + +N L+D LCK + +A+ LFD+M GL P+ +Y+IL++
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 234 GWSQQQNL--------------LR---------VNEVCR------------EMKCECFEP 258
+ ++ L L+ +N C+ EM + EP
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
VVTY L+ YC K ++A+ YHEM K + PS + F+TL++GL + +A++ +
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ P TYN ++ YC M A+ + EM + G+ P++ +Y ++H L
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
EA VF + CE Y +L FC E +L+ ++V +M RG+ +
Sbjct: 591 GQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
+ VLI ++M D G++P ++++ +IDA +T A I
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS----MIDAKSKTGDFKEAFGI 704
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F M G++P+V + ++ LC+ K + +A+E+ M G ++ Y +L++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G ++Q + + +++ + +PDVVTY L+ CK ++++ + EM P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S S+L+ GL +++EAL ++ G +P YNA++ + C + +A +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV-------------------------F 388
D M + G+ PN TY I++ + A S F
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 389 RRMSSEMG---------CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
+S+ G EPTV TY ++ +C + +++ + ++ +M +GI P ++ F
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
L+S L A + A K F +M + ++P ++ + + + G + A F
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 38/351 (10%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY-- 228
+++AV+ F +M ++ +KP +N +++ C+ + KA E +M +G+VPD SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 229 ---------------------------------TILLEGWSQQQNLLRVNEVCREMKCEC 255
T LL G+ ++ L VC+EM
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ D+V YG+LI+ K K G EM ++ + P I++++I+ EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
++ G P TY AV+ C + +++A + +M+ PN TY L L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 376 IKART-TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
K Q+A + + G +TY++++R FC + R++ + +M G+ P
Sbjct: 763 TKGEVDMQKAVELHNAILK--GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ +I+ LC N + A + + M + GIRP ++TL AG
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 11/260 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX-XXXXXXKVK 172
Q+G + LI+ K + K+ + L+++M R L D K
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT--- 229
EA ++ M G P + +++ LCK+ V +A+ L KM+ VP+ +Y
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 230 -ILLEGWSQQQNLLRV-NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
IL +G Q + + N + + + + TY +LI +C+ + +EA M
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLL-----ANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P ++T+IN L + +A+E + G P+ YN ++ C + M
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 348 DAYRVVDEMKQCGVGPNSRT 367
A + +EM + G+ PN++T
Sbjct: 875 KATELRNEMLRQGLIPNNKT 894
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ +LI Y ++++ + V + M K +++P S L++GL + A+E +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
+ G P+ Y V+ + C E+K SR ++I H
Sbjct: 219 VSVGIRPDVYIYTGVIRSLC-------------ELKDL-----SRAKEMIAH-------- 252
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
EA GC+ + Y++++ C ++++ + + + + + P + +
Sbjct: 253 MEA----------TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLR 501
L+ LC + + + +ML + P S+L + L G A++ ++
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 502 KTP 504
+P
Sbjct: 363 VSP 365
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 182/425 (42%), Gaps = 45/425 (10%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWN-----LVEDMKQRKLLTRDTXXXXXXX 164
+A + +G S++S L++ L K +QF+V N L D + K +
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM----YGKAIQA 188
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
V + +E F +M+ + P V +N L+D LCK K + A++LFD+M R L+P
Sbjct: 189 AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
L +Y L++G+ + N + +V MK + EP ++T+ L+ KA ++A
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE------------------------- 319
EM++ +P FS L +G S+++ + AL YE
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 320 ----------KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ A G P YN ++ YC + A ++ M++ G+ P+ Y+
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRA 429
++ + + A +M + G P+V TY+I++ + + D + +M
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 430 RGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETT 489
G +P + + LI+ LC +KL A + M D G+ P +++ L G
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 490 AIHFA 494
A F+
Sbjct: 548 AFRFS 552
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 158/308 (51%), Gaps = 5/308 (1%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E MEK G+KP+ +N L+ C+ +E A++ +KM+ +G+ P +++Y IL+ G+ +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + ++ +EM+ P+VV+YG LIN CK K EA +M+++ + P I
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ LI+G S ++++A F ++ G TYN ++ + ++ +A ++ E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G+ P+ TY+ ++ A Q +++ M G +PT+ TY +++ L C +E +
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-GIKPTLKTYHLLISL-CTKEGI 649
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
++ ++ +M + P + V+ ++ ++ A +QM++ I +++L
Sbjct: 650 ELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 478 KQALIDAG 485
+ G
Sbjct: 707 ILGQLKVG 714
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 167/376 (44%), Gaps = 8/376 (2%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F+ L++ L K + N++++MK + T K + A+ +E
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+K + L++ LCK +EKA+E+ + +GLVP+ Y +++G+ ++ +L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ M+ + +PD + Y LI +C+ + + A ++M+ K + PS ++ L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I G G D+ + ++ + NG P +Y ++ C ++ +A V +M+ GV
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLD 418
P R Y++++ ++A+ R S EM G E + TY+ ++ +L
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAF----RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+ ++ +G+ P + + LIS A + +++M GI+P + L
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 479 QALIDAGMETTAIHFA 494
G+E T F
Sbjct: 642 SLCTKEGIELTERLFG 657
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 12/338 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
K KG S E+++ LI G+ +F ++++++M+ + + K+
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA ME G+ P+V +N L+D C +E A +M +G+ +L +Y L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G S L ++ E+ + +PDV TY LI+ Y A + Y EM+ +
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEK-FKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + LI+ E +E E+ F P+ YN V+ Y M+ A+
Sbjct: 631 KPTLKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS-EMGCEPTVSTYDIILR 409
+ +M + +G + TY+ ++ +K E S+ M++ EM EP TY+II++
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM--EPEADTYNIIVK 743
Query: 410 LFCDEERLDMEMAVW-DQMRARGILPGMHVFFVLISAL 446
C E + M VW +M+ +G L + + L+S L
Sbjct: 744 GHC-EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + ++ + GLKP+V +N L+ + +V++ L+++M+ G+ P LK+Y
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ ++ + + EM +PD++ Y +++ Y ++A +M EK
Sbjct: 639 LLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ +++LI G +L E ++ A PE TYN +V +C A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
Y EM++ G + + ++ L + ++EA V M+ M + TV
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTV 806
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 95 NKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLT 154
KLS A L L +KG K ++++LI G + L E+MK+ +
Sbjct: 578 GKLSEAEDLLLEI-----SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI-- 630
Query: 155 RDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
KE +E E++ + LKP++ +N ++ +EKA L
Sbjct: 631 --KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+M + + D +Y L+ G + L V + EM EP+ TY I++ +C+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
K Y A +Y EMQEK + I + L++GL + R EA
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 3/193 (1%)
Query: 296 HIFSTLING--LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
H FS L+ L K + EA + + + G P + + ++ + + V
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ + P+ Y + +K + +F RM + P+V Y++++ C
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR-IYPSVFIYNVLIDGLCK 226
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+R++ ++D+M AR +LP + + LI C A + + K ++M I P
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 474 FSTLKQALIDAGM 486
F+TL + L AGM
Sbjct: 287 FNTLLKGLFKAGM 299
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A+ KME+ +KP+V ++ ++D LCK AQ LF +M +G+ P++ +Y +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 232 LEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
++G WS Q LLR + + RE+ PDV+T+ LI+A K K EA E
Sbjct: 338 IDGFCSFGRWSDAQRLLR-DMIEREIN-----PDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + + P ++++I G R D+A ++ +P+ T+N ++ YC + R
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+D+ +++ E+ + G+ N+ TY+ ++H + A +F+ M S C T+ T +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI-TCN 506
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I+L FC+ E+L+ + +++ ++ I + ++I +C +K+D A F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 466 GIRPPANLFSTL------KQALIDAGM 486
G+ P ++ + K A+ DA +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANV 593
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 149/297 (50%), Gaps = 5/297 (1%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV F++M + GL P V FN L++ LC V +A L +KM +GL D+ +Y ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + + +M+ +PDVV Y +I+ CK + +A + EM EK +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I+G S R +A P+ T+NA++ A ++ +A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
DEM + P++ TY+ +++ K +A +F M+S P V T++ I+ ++C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVYC 443
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+R+D M + ++ RG++ + LI C + L+AA FQ+M+ G+ P
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 13/297 (4%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
SF W++ Q+ + E +F+ALI A K + L ++M R +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T + +A F+ M P+V FN ++DV C++K V++ +L ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
RGLV + +Y L+ G+ + NL ++ +EM PD +T IL+ +C+ +K
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+EA+ + +Q + ++ +I+G+ ++DEA + + +G P+ TYN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
+ +C + DA + +MK G P++ TY+ ++ +KA ++ + M S
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 30/323 (9%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ ++ TF K+ K G +P+V FN L+ LC + +A LF M G + + +
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++E P V+T+ LIN C + EA ++M K
Sbjct: 216 QMVEIG--------------------LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + T++NG+ AL K + P+ Y+A++ C DA
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EM + G+ PN TY+ ++ +A + R M E P V T++ ++
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNALIS 374
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
E +L + D+M R I P + +I C N+ D A + M D+ P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASP 430
Query: 470 PANLFSTL-----KQALIDAGME 487
F+T+ + +D GM+
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQ 453
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
R+M+ ++ ++ ILI +C K ++ + ++ + P F+TL++GL +
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189
Query: 309 KRLDEALEFYEKFKANGF---------------APETPTYNAVVGAYCWSMRMDDAYRVV 353
R+ EAL + GF P T+N ++ C R+ +A +V
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
++M G+ + TY I++ + K T+ A ++ +M E +P V Y I+ C
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCK 308
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ ++ +M +GI P + + +I C + A + + M++ I P
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 474 FSTLKQALIDAG 485
F+ L A + G
Sbjct: 369 FNALISASVKEG 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
+I + + + D A+ Y +M+ + + + + F+ LI +L +L + K G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
F P+ T+N ++ C R+ +A + M + G EA
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF--------------------LEAV 211
Query: 386 SVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
++F +M E+G P V T++ ++ C E R+ A+ ++M +G+ + + +++
Sbjct: 212 ALFDQM-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 446 LCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+C +A +M + I+P ++S + L G + A
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
K LD+A++F++ + N V+G + R D A + +M+ + N ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW---- 424
+I++ + S F +++ ++G +P V T++ +L C E+R+ +A++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 425 -----------DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
DQM G+ P + F LI+ LC ++ A +M+ G+
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+ T+ + G +A++ K+++ P V
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+AV +MEK G+K +V L+D LCK++ V A E+ +M+ RG+ P++ +Y+
Sbjct: 29 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 88
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G + L EM + P+V+T+ LI+AY K K + Y M + +
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ +S+LI GL R+DEA++ + + G P TY+ + + S R+DD
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR- 409
+++D+M Q GV N+ + + ++ +A A VF M+S G P + +Y+I+L
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN-GLIPNIRSYNIVLAG 267
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
LF + E ++ ++ ++ M+ + + ++I +C A + A F ++ + P
Sbjct: 268 LFANGE-VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 470 PANLFSTLKQALIDAGMETTA 490
++ + L AGM T A
Sbjct: 327 DFKAYTIMIAELNRAGMRTEA 347
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 1/283 (0%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KM K G++P++ + LV+ C S S++ A + +M G+ D+ TIL++ + +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ EV + MK P+VVTY LI CK+ + +A HEM K + P+ FS
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
LI+ +L + Y+ P TY++++ C R+D+A +++D M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
G PN TY + + K+ + + M TVS + +++ + ++D+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC-NTLIKGYFQAGKIDL 241
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ V+ M + G++P + + ++++ L +++ A F+ M
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 126/278 (45%), Gaps = 1/278 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKV 171
K +G + ++ +LI L K + + +M +K+ T K+
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ ++ M + + P V ++ L+ LC V++A ++ D M +G P++ +Y+ L
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G+ + + ++ +M + V+ LI Y +A K D A+G + M +
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ ++ ++ GL ++ +++AL +E + + TY ++ C + + +AY
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYD 314
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
+ ++K V P+ + Y I++ L +A EA ++ R
Sbjct: 315 LFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 206/481 (42%), Gaps = 44/481 (9%)
Query: 53 IPHTPHADKICKILS-----KSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+ H P A + KI+S + P+S D LS ++P + EV+ KL N + F
Sbjct: 33 VIHCPEA-WLVKIVSTLFVYRVPDS--DLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRF 89
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----------- 156
+ ++ + +HS +++ L +L K + + E MK + +
Sbjct: 90 WEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 157 -----------------------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+V++A++ F++ ++ + F
Sbjct: 150 EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N L+ LC EKA EL M G PD+ +Y L++G+ + L + +E+ +++K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 254 -ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PDVVTY +I+ YCKA K EA +M + P+ F+ L++G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A E K + G P+ T+ +++ YC ++ +R+ +EM G+ PN+ TY I++
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ L +A + +++S+ P Y+ ++ FC +++ + ++M +
Sbjct: 390 NALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIH 492
P F +LI C ++ A F +M+ +G P S+L L+ AGM A H
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 493 F 493
Sbjct: 509 L 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 206/481 (42%), Gaps = 44/481 (9%)
Query: 53 IPHTPHADKICKILS-----KSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+ H P A + KI+S + P+S D LS ++P + EV+ KL N + F
Sbjct: 33 VIHCPEA-WLVKIVSTLFVYRVPDS--DLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRF 89
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----------- 156
+ ++ + +HS +++ L +L K + + E MK + +
Sbjct: 90 WEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 157 -----------------------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+V++A++ F++ ++ + F
Sbjct: 150 EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N L+ LC EKA EL M G PD+ +Y L++G+ + L + +E+ +++K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 254 -ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PDVVTY +I+ YCKA K EA +M + P+ F+ L++G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A E K + G P+ T+ +++ YC ++ +R+ +EM G+ PN+ TY I++
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ L +A + +++S+ P Y+ ++ FC +++ + ++M +
Sbjct: 390 NALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIH 492
P F +LI C ++ A F +M+ +G P S+L L+ AGM A H
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 493 F 493
Sbjct: 509 L 509
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 175/420 (41%), Gaps = 43/420 (10%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXX 161
LAL FF FKH+ +F +I L Q + L++ MK + + D
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVL--------------------- 200
+ AVE F +++++G P V +N ++D L
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 201 --------------CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
CK+ V+ A++L +M ++G PD SYT ++ + + + +
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE----VGLVK 233
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
RE+ E FEP V Y LIN CK Y A EM EK + P+ +STLIN L
Sbjct: 234 EGRELA-ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-KQCGVGPNS 365
+ +++ A F + G P T +++V DA + ++M + G+ PN
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
Y+ ++ +A SVF M E+GC P + TY ++ F LD + +W+
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHME-EIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+M G P + V+ ++ ALC +K A + M P F+ + L DAG
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 1/299 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A E +M + G+ P V ++ L++VLC S +E A +M RG P++ + + L
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 232 LEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++G + ++ +M + +P+VV Y L+ +C +AV + M+E
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + +LING LD A+ + K +G P Y +V A C + +A
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+++ M + P+ T++ + L A A VFR+M + C P + TY+ +L
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
R++ + ++ RG+ + L+ C+A A + +M+ G P
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 162/373 (43%), Gaps = 15/373 (4%)
Query: 85 VSPELVA--EVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEAL---GKIRQFK 138
+SP +++ ++N L N+G + L+F F ++G + + +L++ G
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 139 VIWN-LVEDMK-QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+WN ++ Q ++ +T K AV F ME+ G P + + L
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK---AVSVFSHMEEIGCSPNIRTYGSL 393
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
++ K S++ A +++KM G P++ YT ++E + + M E
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI--FSTLINGLGSDKRLDEA 314
P V T+ I C A + D A + +M++++ P P+I ++ L++GL R++EA
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-PNIVTYNELLDGLAKANRIEEA 512
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
+ G + TYN ++ C + A ++V +M G P+ T ++I+
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 375 LIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
K + A + +S P V +Y ++ C + + + ++M + GI+
Sbjct: 573 YCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIV 632
Query: 434 PGMHVFFVLISAL 446
P + + VLI+
Sbjct: 633 PSIATWSVLINCF 645
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 32/252 (12%)
Query: 279 AVGFYHEMQEKNMMP-SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
A+ F+ + N+ +P F +I L D ++D ++ K GF + +V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC 397
Y + A + +K+ G P+ + Y+ +L L+ Q Y V+R M + G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD-GF 177
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG---------------------- 435
EP V TY+++L+ C ++D + +M +G P
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 436 --------MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
+ V+ LI+ LC + A + ++M++ GI P +STL L ++G
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 488 TTAIHFALKIDK 499
A F ++ K
Sbjct: 298 ELAFSFLTQMLK 309
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A+ +M + G +V +N ++ LCK K + +A +LF++M R L PD + TI
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + NL E+ ++MK + DVVTY L++ + K D A + +M K
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P+P +S L+N L S L EA +++ + P N+++ YC S D
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM-GCEPTVSTYDIILR 409
+++M G P+ +Y+ +++ ++ +A+ + ++M E G P V TY+ IL
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC + ++ V +M RG+ P + +I+ + L A + +ML G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA E M G P V +N +++ LCK E+A+E+F +M GL PD +Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL ++ +++ +V +M+ PD+V + +++ + ++ D+A+ +++ ++E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P I++ LI G + A+ + G A + TYN ++ C + +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ +EM + + P+S T I++ K Q A +F++M E V TY+ +L
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDG 524
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F +D +W M ++ ILP + +L++ALC L A + + +M+ I+P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 471 ANLFSTLKQALIDAGMETTAIHFALKI 497
+ +++ + +G + F K+
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 193/493 (39%), Gaps = 74/493 (15%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF-----FHWAEK 113
+KIC L + N+ + + ++P V EVL + N L F FH+
Sbjct: 55 VEKICFSLKQGNNNVRNHL-----IRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN- 108
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR------------------ 155
FKH++ S A+I L + + + + M +R ++R
Sbjct: 109 ---FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
K++EA E F + G + N L+ L + VE A ++ +
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ G+ ++ + I++ + + +V +++ + PD+VTY LI+AY
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
+EA + M K P + ++T+INGL + + A E + + +G +P++ TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 336 VVGAYC-----------------------------------WSMRMDDAYRVVDEMKQCG 360
++ C S +D A + +K+ G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERL 417
+ P++ Y I LI+ + SV + +EM GC V TY+ IL C + L
Sbjct: 406 LIPDNVIYTI----LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
++++M R + P + +LI C L A + FQ+M + IR ++TL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 478 KQALIDAGMETTA 490
G TA
Sbjct: 522 LDGFGKVGDIDTA 534
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 18/315 (5%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLK-----------------SYTILLEGWSQQ 238
++ +L +S + AQ +M R V L+ + +L+ + Q
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ L +E ++ + F + LI + + + A G Y E+ + + +
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ ++N L D ++++ F + + G P+ TYN ++ AY M++A+ +++ M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
G P TY+ +++ L K + A VF M G P +TY +L C + +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVV 357
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
V+ MR+R ++P + F ++S + LD A YF + + G+ P +++ L
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 479 QALIDAGMETTAIHF 493
Q GM + A++
Sbjct: 418 QGYCRKGMISVAMNL 432
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K+K + +++ L++ GK+ + DM +++L T + +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA +++M +KP V N ++ C+S + + +KM G VPD SY L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 232 LEGWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ G+ +++N+ + + ++M+ E PDV TY +++ +C+ + EA +M E+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+ P ++ +ING S L EA +++ GF+P+
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 166/410 (40%), Gaps = 48/410 (11%)
Query: 3 FSRSPKRFFNLFSSNL-PLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADK 61
+ R+ + F + S L P S Y + L + + + +R ++P
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAE------VLNKLSNAGVLALSFFHWAEK-Q 114
+ + ++S N +D AL + L+ + ++ G+++++ E Q
Sbjct: 381 MMSLFTRSGN--LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+G +++ ++ L K + L +M +R L T ++
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+KM++ ++ +V +N L+D K ++ A+E++ M + ++P SY+IL+
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 234 GWSQQQNLLRVNEV-----------------------CR------------EMKCECFEP 258
+ +L V CR +M E F P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEK--NMMPSPHIFSTLINGLGSDKRLDEALE 316
D ++Y LI + + + +A G +M+E+ ++P ++++++G ++ EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
K G P+ TY ++ + + +A+R+ DEM Q G P+ +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 3/317 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G V + N L+ LC++ KA L +MR L+PD+ SY ++ G+ + +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
L + E+ EMK +VT+GILI+A+CKA K DEA+GF EM+ + ++++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI G LD +++ G +P TYN ++ +C ++ +A + + M + G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
V PN TY ++ L T+EA + M E EP TY+II+ C + +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+ + + M+ R P + +L+ LC LD A K ML ++ S A
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY--NA 429
Query: 481 LIDAGMETTAIHFALKI 497
LI + +H AL I
Sbjct: 430 LIHGLCKENRLHQALDI 446
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 173/392 (44%), Gaps = 8/392 (2%)
Query: 101 GVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXX 160
GVLAL ++GF + + + L++ L + + +L+ +M++ L+
Sbjct: 128 GVLALML------KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 161 XXXXXXXXXK-VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
K +++A+E +M+ G + + L+D CK+ +++A +M+
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
GL DL YT L+ G+ L R + E+ P +TY LI +CK + EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ M E+ + P+ + ++ LI+GL + EAL+ P TYN ++
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG-CE 398
C + DA +V+ MK+ P++ TY+I+L L EA + M + +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
P V +Y+ ++ C E RL + ++D + + +L+++ A ++ A +
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 459 FQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
++Q+ D I ++ ++ + GM A
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++K AV F++ G + N L+ L +S++ E A + KM + S +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LLE + Q + V M F +V + IL+ C+ + +AV EM+
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++MP ++T+I G K L++ALE + K +G + T+ ++ A+C + +MD+A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EMK G+ + Y ++ ++F + E G P TY+ ++R
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL-ERGDSPCAITYNTLIR 290
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
FC +L +++ M RG+ P ++ + LI LC K A + M++ P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
A ++ + L G+ A+ + K R P
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 5/327 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA E FE M + G++P V + L+D LC ++A +L + M + P+ +Y
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + + E+ MK PD +TY IL+ C DEA + M +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 290 NMMPSPHIFS--TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P + S LI+GL + RL +AL+ Y+ A + T N ++ + + ++
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDI 406
A + ++ + NS TY ++ K A + +M SE+ +P+V Y+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL--QPSVFDYNC 534
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+L C E LD ++++M+ P + F ++I A + +A M G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 467 IRPPANLFSTLKQALIDAGMETTAIHF 493
+ P +S L + G AI F
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISF 621
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 17/265 (6%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
+ V+ L+ Y + +K A G M ++ + + + L+ GL + +A+
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+ + N P+ +YN V+ +C ++ A + +EMK G + T+ I++ KA
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
EA + M MG E + Y ++R FCD LD A++D++ RG P
Sbjct: 226 GKMDEAMGFLKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM------------ 486
+ LI C +L A + F+ M++ G+RP ++ L L G
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 487 ----ETTAIHFALKIDKLRKTPLVA 507
E A+ + + I+KL K LVA
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVA 369
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV--PDLKSY 228
V +AVE E M+K +P+ +N L+ LC +++A +L M PD+ SY
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ G ++ L + ++ + + D VT IL+N+ KA ++A+ + ++ +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++ + ++ +I+G L+ A K + + P YN ++ + C +D
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A+R+ +EM++ P+ +++I++ +KA + A S+ MS G P + TY ++
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLI 606
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHV 438
F LD ++ +D+M G P H+
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+V +N L+ LCK + +A +++D + + D + ILL + ++ + E+
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+++ + TY +I+ +CK + A G +M+ + PS ++ L++ L
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+ LD+A +E+ + + P+ ++N ++ + + A ++ M + G+ P+ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
Y +++ +K EA S F +M + G EP D +L+ +C
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKM-VDSGFEPDAHICDSVLK-YC 644
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KM L+P V D+N L+ LCK S+++A LF++M+ PD+ S+ I+++G +
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ + M PD+ TY LIN + K DEA+ F+ +M + P HI
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC-WSMRMDDAYRVV 353
+++ S D+ E +K + V+ C S MD A R++
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
S++ALI L K + + + D+ KL D T V +A+E +++
Sbjct: 426 SYNALIHGLCKENRLHQALD-IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+ + + ++D CK+ + A+ L KMR L P + Y LL ++ +
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
L + + EM+ + PDVV++ I+I+ KA A M + P +S
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
LIN LDEA+ F++K +GF P+ ++V+ YC S
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYCIS 646
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 183/437 (41%), Gaps = 62/437 (14%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-----KLLTRDTX 158
L FF W KGF H +SF ++E LG+ R V N + +++R KL R
Sbjct: 84 GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR-YF 141
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
+E+V+ F+ M++ G+ P V FN L+ +L K A +LFD+MR
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 219 R-GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY- 276
G+ PD ++ L+ G+ + + + ++M+ PDVVTY +I+ C+A K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 277 ------------------------------------DEAVGFYHEMQEKNMMPSPHIFST 300
DEAV +H+M + + P+ ++T
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 301 LINGLGSDKRLDEALEFY----EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
LI GL R DE + + F FAP+ T+N ++ A+C + +D A +V EM
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE---MG---CEPTVSTYDIILRL 410
+ P+S +Y +++ L A ++F + + +G C+P + Y+ +
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Query: 411 FCDEERLDMEMAVWDQMRARGIL--PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C + V+ Q+ RG+ P + LI+ C K A + ML
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHCREGKFKPAYELLVLMLRREFV 496
Query: 469 PPANLFSTLKQALIDAG 485
P + L L+ G
Sbjct: 497 PDLETYELLIDGLLKIG 513
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF--KANGFAPETPTY-N 334
+ + F+ + K F ++ LG + L+ A F ++NG Y N
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
+++ +Y + ++ ++ MKQ G+ P+ T++ +L L+K T A+ +F M
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
G P T++ ++ FC +D ++ M P + + +I LC A K+
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 455 ACKYFQQMLD--VGIRPPANLFSTL 477
A ML + P ++TL
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTL 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K K+A + F ++ K G++ S + L+ C+ + A EL M R VPDL++Y
Sbjct: 445 KTKQAEKVFRQLMKRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G + L ++ + M + P T+ ++ K K +E+ M EK
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + + + ++ L S + ++A NG+ + ++G C + ++ DA
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM---EELLGYLCENRKLLDA 620
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +V + + T + ++ L K + EA+S++ + E+G +S + ++LR
Sbjct: 621 HTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL-VELGNHQQLSCH-VVLR 678
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ +++ G +P V +N ++D LC+ V A ++ M+ G+ PD+ +Y L+
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ +M PDV+T+ LI+ Y K + EA Y+EM ++++
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++LINGL LDEA + + GF P TYN ++ YC + R+DD ++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ M + GV ++ TY+ + +A A V RM S G P + T++I+L C
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS-CGVHPDMYTFNILLDGLC 405
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
D ++ + + ++ + G+ + ++I LC A+K++ A F + G+ P
Sbjct: 406 DHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Query: 473 LFSTLKQAL 481
+ T+ L
Sbjct: 466 TYITMMIGL 474
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 155/335 (46%), Gaps = 8/335 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDM----KQRKLLTRDTXXXXXXXXXXXXKV 171
GF+ S +F +L+ + +F +LV+ + + ++ +T +V
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG---QV 200
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ + M+K G++P+V +N L+ L S + + + M G+ PD+ +++ L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ LL + EM P++VTY LIN C DEA + + K
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++TLING KR+D+ ++ +G +T TYN + YC + + A +
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
V+ M CGV P+ T++I+L L +A + + TY+II++
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII-TYNIIIKGL 439
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
C ++++ ++ + +G+ P + + ++ L
Sbjct: 440 CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 161/373 (43%), Gaps = 39/373 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+ F M + P + DF++L+ + K E LF + G+ DL S+T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + L +M FEP +VT+G L+N +C ++ EA+ ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV------GAYCWS 343
P+ I++T+I+ L +++ AL+ + K G P+ TYN+++ G + S
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 344 -------MRMD----------------------DAYRVVDEMKQCGVGPNSRTYDIILHH 374
MRM +A + +EM Q V PN TY+ +++
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
L EA V + S+ G P TY+ ++ +C +R+D M + M G+
Sbjct: 299 LCIHGLLDEAKKVLNVLVSK-GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFA 494
+ L C A K AA K +M+ G+ P F+ L L D G A+
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL--- 414
Query: 495 LKIDKLRKTPLVA 507
++++ L+K+ V
Sbjct: 415 VRLEDLQKSKTVV 427
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
K+ G + ++++LI L + V ++ DM R ++ D T +
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM-MRMGISPDVITFSALIDVYGKEGQ 269
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + + +M + + P + +N L++ LC +++A+++ + + +G P+ +Y
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ + + + ++ M + + D TY L YC+A K+ A M
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + F+ L++GL ++ +AL E + + TYN ++ C + +++DA+
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
+ + GV P+ TY ++ L + R +EA+ ++R+M E G P
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
S++ +DA + +M + P+ + +L + K + S+FR + +G +
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM-LGISHDLY 115
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
++ ++ FC RL + ++ +M G P + F L++ CH N+ A Q+
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 463 LDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ +G P +++T+ +L + G TA+ + K+ P
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A M K G +P V +N L+D LCK+ + A EL ++M +GL D+ +Y
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 230 ILLEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
LL G WS +L R+M PDVVT+ LI+ + K DEA Y
Sbjct: 216 TLLTGLCYSGRWSDAARML------RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
EM + ++ P+ ++++INGL RL +A + ++ + G P TYN ++ +C
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+D+ ++ M G + TY+ ++H + + A +F M S P + T
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR-VTPDIIT 388
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ I+L C ++ + +D MR G+ + ++I LC A+K++ A + F ++
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 464 DVGIRPPANLFSTLKQALIDAG 485
G++P A ++ + L G
Sbjct: 449 VEGVKPDARTYTIMILGLCKNG 470
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KM K G +P + F L+ C + A L M G P++ Y L++
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + L E+ EM+ + DVVTY L+ C + ++ +A +M ++++ P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
F+ LI+ LDEA E Y++ + P TYN+++ C R+ DA +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
D M G PN TY+ ++ K R E +F+RMS E G + TY+ ++ +C
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQ 363
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+L + + ++ M +R + P + +L+ LC ++++A F M
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 1/335 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ ++A F +M P + DF +L+ + E KM G+ DL S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L V +M +EP +VT+G L++ +C + +A M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ +++TLI+GL + L+ ALE + + G + TYN ++ C+S R DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R++ +M + + P+ T+ ++ +K EA +++ M + +P TY+ I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIIN 289
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C RL +D M ++G P + + LIS C +D K FQ+M G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
++TL G A+ + R TP
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 137/294 (46%), Gaps = 4/294 (1%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXX 160
+AL + EK KG +++ L+ L ++ ++ DM +R + D T
Sbjct: 194 IALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI-NPDVVTFTA 251
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+ EA E +++M + + P +N +++ LC + A++ FD M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
P++ +Y L+ G+ + + + ++ + M CE F D+ TY LI+ YC+ K A+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ M + + P L++GL + ++ AL ++ + + YN ++
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
C + +++ A+ + + GV P++RTY I++ L K +EA + RRM E
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 17/308 (5%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFF--------HWAEKQKGFKHSTE 122
N+ ID + + ++ EL+ E+ K A V+ + W++ + + +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 123 --------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+F ALI+ K L ++M Q + + T ++ +
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +TF+ M G P V +N L+ CK + V++ +LF +M G D+ +Y L+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q L ++ M PD++T+ IL++ C + + A+ + +M+E
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ +I+GL ++++A E + + G P+ TY ++ C + +A ++
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 354 DEMKQCGV 361
MK+ G+
Sbjct: 480 RRMKEEGI 487
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 163/338 (48%), Gaps = 2/338 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV A + ME+ G++P V +N ++ C+ K+++ A+ +F +M +GL P+ +Y+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QE 288
IL++G+ + ++ +V +M FE + V Y +IN CK + +A + +E
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K S ++++I+G D A+E Y + NG +P T+ +++ +C S RMD
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + EMK + + Y ++ K + AY++F + E+G P VS Y+ ++
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-PELGLMPNVSVYNSLI 702
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
F + ++D + ++ +M GI + + +I L ++ A + ++LD+GI
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 469 PPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLV 506
P L L L G A ++ K TP V
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNV 800
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 152/336 (45%), Gaps = 7/336 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXX 169
+KG + + ++ LI+ K + + W+++ M + +T
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K KE ++ K ++Y + + +N ++D K + A E + +M G P++ ++T
Sbjct: 572 KAKEMLQNLIKEKRYSMS--CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + E+ EMK + D+ YG LI+ +CK A + E+ E
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+MP+ ++++LI+G + ++D A++ Y+K +G + + TY ++ ++ A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ E+ G+ P+ + ++++ L K +A + M + P V Y ++
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK-DVTPNVLLYSTVIA 808
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
E L+ + D+M +GI+ VF +L+S
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 157/398 (39%), Gaps = 71/398 (17%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++EAV ++M +G+ V LV+ CK + KA +LF++M GL PD ++
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVV---------------------------- 261
+++E + + + + E MK P V
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES 444
Query: 262 --TYGILINA----YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+G + N +CK K D A F M++K + P+ ++ ++ K +D A
Sbjct: 445 WIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ----------------- 358
+ + G P TY+ ++ + + +A+ V+++M
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 359 CGVGPNSR-------------------TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
C VG S+ +Y+ I+ +K T A +R MS E G P
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS-ENGKSP 623
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
V T+ ++ FC R+D+ + + +M++ + + + LI C N + A F
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 460 QQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
++ ++G+ P +++++L + G AI K+
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 3/308 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA E + KM G+ + L+ + + E+A ++F ++ RG PD +++
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEP-DVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + +L+ ++ REM+ + P TY +I A+ K +EAV EM
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ S ++L+NG L +AL+ + + + G AP+ ++ +V +C +M M+ A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
MK + P+S ++ +KA + + A +F S E I L
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFL- 457
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
LFC + ++D + M +GI P + + ++ A C +D A F +ML+ G+ P
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 470 PANLFSTL 477
+S L
Sbjct: 518 NNFTYSIL 525
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 143/322 (44%), Gaps = 3/322 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSY 228
K +EAV+ F ++ G +P+ F+ V CK+ + A +L +MR + VP ++Y
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T ++ + ++ N+ V EM V+ L+N YCK + +A+ ++ M+E
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P +FS ++ + +++A+EFY + K+ AP + + ++ + +
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + ++ + + I L L + +A + F +M + G EP V Y+ ++
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFL--LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C + +D+ +++ +M +G+ P + +LI A QM
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 469 PPANLFSTLKQALIDAGMETTA 490
+++T+ L G + A
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKA 573
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 16/288 (5%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
K G+ + ++ K ++E+A + D+M G+ + + T L+ G+ + L
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+ ++ M+ E PD V + +++ +CK + ++A+ FY M+ + PS + T+I
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 303 NGLGSDKRLDEALEF----YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
G + + ALE +E + A+GF N + +C ++D A + M+Q
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGF-----MCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
G+ PN Y+ ++ + + A S+F M E G EP TY I++ F +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM-LEKGLEPNNFTYSILIDGFFKNKD-- 534
Query: 419 MEMAVWD---QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
E WD QM A ++ +I+ LC + A + Q ++
Sbjct: 535 -EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 111/261 (42%)
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
VN + K FE + L+NAY + K+ D AV + M ++ ++P + +++
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
L +DEA E Y K G A + T ++ A + ++A ++ + G P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+ + + + K A + R M ++G + TY ++ F E ++ + V
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
D+M GI + L++ C N+L A F +M + G+ P +FS + +
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 484 AGMETTAIHFALKIDKLRKTP 504
AI F +++ +R P
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAP 413
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 2/280 (0%)
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+++G + FN L++ ++K ++ A + F M R +VP + +L + +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ +M D VT +L+ A + +K +EAV + + + P +FS
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 302 INGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+ L AL+ + + G TY +V+ A+ M++A RV+DEM G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ + +++ K +A +F RM E G P + +++ FC ++
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE-GLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
+ + +M++ I P + +I A +AA + F
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-D 156
SN LAL H K K ++ ALI+ K K + L ++ + L+
Sbjct: 638 SNRMDLALEMTHEM-KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
K+ A++ ++KM G+ ++ + ++D L K ++ A +L+ ++
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
G+VPD + +L+ G S++ L+ +++ EMK + P+V+ Y +I + +
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLING 304
+EA + EM EK ++ +F+ L++G
Sbjct: 817 NEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 34/330 (10%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G V FN L++ CK ++ AQ++FD++ R L P + S+ L+ G+ + NL
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ +M+ PDV TY LINA CK K D A G + EM ++ ++P+ IF+TLI+G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ +D E Y+K + G P+ YN +V +C + + A +VD M + G+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSS------------------------------- 393
TY ++ + + A + + M
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 394 EM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
EM G +P TY +++ FC + + +M++ G +P + + VL++ LC
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 451 KLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
++ A ML++G+ P ++TL +
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ E +MEK +P+V ++ L++ LCK ++ A LFD+M RGL+P+ +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G S+ + + E ++M + +PD+V Y L+N +CK A M +
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++TLI+G ++ ALE ++ NG + ++A+V C R+ DA
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R + EM + G+ P+ TY +++ K Q + + + M S+ G P+V TY+++L
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLN 528
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
C ++ + D M G++P + L+ H +++ +Y Q+
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK 578
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 109 HWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX-XXXXXXXXX 167
H EK + + ++ ALI AL K + L ++M +R L+ D
Sbjct: 299 HQMEKSRT-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
++ E+++KM GL+P++ +N LV+ CK+ + A+ + D M RGL PD +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
YT L++G+ + ++ E+ +EM E D V + L+ CK + +A EM
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P ++ +++ + ++ +++G P TYN ++ C +M
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL--HH 374
+A ++D M GV P+ TY+ +L HH
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHH 566
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 6/298 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD---TXXXXXXXXXXXXK 170
++ + + SF+ LI K+ + L M++ + TR T K
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR--TRPDVFTYSALINALCKENK 325
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A F++M K GL P F L+ ++ ++ +E + KM +GL PD+ Y
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ + +L+ + M PD +TY LI+ +C+ + A+ EM +
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ FS L+ G+ + R+ +A + G P+ TY ++ A+C +
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+++ EM+ G P+ TY+++L+ L K + A + M + +G P TY+ +L
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN-IGVVPDDITYNTLL 562
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 168/432 (38%), Gaps = 65/432 (15%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALG 132
+I L LSV +L+ N LS +FF + Q GF+ + E++ L L
Sbjct: 72 SIRKVLPSLSVHHVVDLINH--NPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLA 129
Query: 133 KIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSD 192
F +L+E + RK A F + + + P
Sbjct: 130 VHEMFTEAQSLIELVVSRK------------------GKNSASSVFISLVEMRVTPMCG- 170
Query: 193 FNKLVDVLCKSKS----VEKAQELFDKMR-HRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
LVD L + + + A + F R HR VP ++ LL+ + +
Sbjct: 171 --FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVP-IRGCGNLLDRMMKLNPTGTIWGF 227
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
E+ F +V + IL+N +CK +A + E+ ++++ P+ F+TLING
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
LDE + + + P+ TY+A++ A C +MD A+ + DEM + G+ PN
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN--- 344
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
D+I LI + +D+ + +M
Sbjct: 345 -DVIFTTLIHGHSRNG--------------------------------EIDLMKESYQKM 371
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
++G+ P + ++ L++ C L AA M+ G+RP ++TL G
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 488 TTAIHFALKIDK 499
TA+ ++D+
Sbjct: 432 ETALEIRKEMDQ 443
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 22/334 (6%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K ++A +M G P+ S ++K+++ LC + +E A LF++M+ GLV D+ +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I+++ + + + + + EM+ P+VVTY LI+AY KAKK A + M +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEK----------------FKANGFAPETPTY 333
+P+ +S LI+G ++++A + +E+ + N P TY
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
A++ +C S R+++A +++D M G PN YD ++ L K EA V M S
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-S 701
Query: 394 EMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLD 453
E G T+ TY ++ + +R D+ V +M P + ++ +I LC K D
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 454 AACKYFQQMLDVGIRPPANLFSTLKQALIDA-GM 486
A K Q M + G +P ++ A+ID GM
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYT----AMIDGFGM 791
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 212/495 (42%), Gaps = 66/495 (13%)
Query: 45 GSLRIHTLIPHTPHADKICKILSKSPNSTIDAA-------LADLSVEVSPELVAEVLNKL 97
G++ +H ++P + + ++ + + D L ++S LV EVL +
Sbjct: 83 GNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLI 142
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRD 156
+ + +SFF WA +Q G+KH+ ++AL++ + + KV ++ ++ K + +
Sbjct: 143 ARPSAV-ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGE 201
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
A+E +++ + +P S +N L+ K+ ++ A + +M
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 217 -----RHRGLVPDLKSYTILLEG-WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
R G +Y++ G W + L+ E F PD V Y LI+
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---------ENFVPDTVFYTKLISGL 312
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A ++EA+ F + M+ + +P+ +STL+ G + K+L G P
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH---------------- 374
+N++V AYC S AY+++ +M +CG P Y+I++
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 375 -------------------------LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
L A ++A+SV R M + G P STY +L
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLN 491
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C+ ++++ ++++M+ G++ ++ + +++ + C A ++ A K+F +M +VG P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 470 PANLFSTLKQALIDA 484
++ L A + A
Sbjct: 552 NVVTYTALIHAYLKA 566
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 23/358 (6%)
Query: 91 AEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVED 146
++VLN L NA + L+F + E K+ G ++ ++++ G I Q + +N + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 147 MKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+ + T KV A E FE M G P + ++ L+D CK+ V
Sbjct: 547 VGCTPNVV--TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 207 EKAQELFDKMRHRGLVPDLK----------------SYTILLEGWSQQQNLLRVNEVCRE 250
EKA ++F++M VPD+ +Y LL+G+ + + ++
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
M E EP+ + Y LI+ CK K DEA EM E + + +S+LI+ KR
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
D A + K N AP Y ++ C + D+AY+++ M++ G PN TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
++ + + RM S+ G P TY +++ C LD+ + ++M+
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 5/314 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+EA + + M G +P ++ L+D LCK +++AQE+ +M G L +Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + + ++V +M P+VV Y +I+ CK K DEA M+EK
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++ +I+G G +++ LE E+ + G AP TY ++ C + +D A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +++EMKQ ++ Y ++ K E+ + + + P +S Y +++
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQD-DTAPFLSVYRLLID 890
Query: 410 LFCDEERLDMEMAVWDQMR--ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+RL+M + + +++ + ++ + LI +LC ANK++ A + F +M G+
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 468 RPPANLFSTLKQAL 481
P F +L + L
Sbjct: 951 IPEMQSFCSLIKGL 964
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 23/323 (7%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P FN LV C S A +L KM G +P Y IL+ ++ L
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 245 N--EVCREMKCECFEPDVVTYGILINAY----CKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ ++ + E VV I ++++ C A KY++A EM + +P +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
S ++N L + +++ A +E+ K G + TY +V ++C + ++ A + +EM++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
G PN TY ++H +KA+ A +F M SE GC P + TY ++ C +++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVE 605
Query: 419 MEMAVWDQMRARGILPGMHVFF----------------VLISALCHANKLDAACKYFQQM 462
++++M +P + ++F L+ C +++++ A K M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 463 LDVGIRPPANLFSTLKQALIDAG 485
G P ++ L L G
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVG 688
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++ +E E+M G+ P + L+D CK+ +++ A L ++M+ Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 230 ILLEGWSQQ---------------------------QNLLRVNEVCREMK----CECFEP 258
++EG++++ NL++ + ++ F
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 259 DVV----TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
+V TY LI + C A K + A + EM +K ++P F +LI GL + ++ EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 315 L 315
L
Sbjct: 974 L 974
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 189/420 (45%), Gaps = 19/420 (4%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
+V +L++ S +G AL F WA GF HS ++ AL L R+F ++ L+++M
Sbjct: 46 IVRLILDQKSASG--ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 103
Query: 149 QRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
L D +K + + + K+G+KP + FN ++DVL K + +
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDI 162
Query: 207 EKAQELFD-KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
+ A+E F KM G+ D+ +Y IL++G S + ++ + MK P+ V Y
Sbjct: 163 DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
L++A CK K A EM+E P+ F+ LI+ ++++L +++ EK + G
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 278
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
F P+ T V+ C R+ +A V++ ++ G + + + L+K
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG----GKVDVVACNTLVKGYCALGKM 334
Query: 386 SVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
V +R EM G P V TY++++ +CD LD + ++ M+ I F L
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANL--FSTLKQALIDAGMETTAIHFALKIDKL 500
I L + D K + M D A + ++ + A+ F LK++KL
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 9/325 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA+E E++E G K +V N LV C + AQ F +M +G +P++++Y
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G+ L + +MK + + T+ LI + D+ + MQ+
Sbjct: 358 LLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
Query: 290 NMMPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ + I ++ +I G + R ++ALEF K P + + + C MD
Sbjct: 418 DTVHGARIDPYNCVIYGFYKENRWEDALEFL--LKMEKLFPRAVDRSFKLISLCEKGGMD 475
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
D D+M G P+ ++H + +E+ + M + G P ST++ +
Sbjct: 476 DLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR-GYLPRSSTFNAV 534
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ FC ++++ + + M RG +P + L+ LC + A F +M++ I
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 468 RPPANLFSTLKQALIDAGMETTAIH 492
P +++S+L L + TAIH
Sbjct: 595 VPDPSMWSSLMFCL----SQKTAIH 615
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 5/293 (1%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
+P FN L+ C + + ++ L +K G VPD+ + T ++E + + E
Sbjct: 245 EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
V ++ + + DVV L+ YC K A F+ EM+ K +P+ ++ LI G
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
LD AL+ + K + T+N ++ R DD ++++ M+ +R
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGAR 424
Query: 367 T--YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
Y+ +++ K ++A +M P L C++ +D +
Sbjct: 425 IDPYNCVIYGFYKENRWEDALEFLLKMEKLF---PRAVDRSFKLISLCEKGGMDDLKTAY 481
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
DQM G +P + V LI K++ + + M+ G P ++ F+ +
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 119/250 (47%), Gaps = 7/250 (2%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
PD + +I + +A+ + + + + PS +F+++++ L + +D A EF
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREF 168
Query: 318 Y-EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+ K A+G + TY ++ + R+ D ++++ MK GV PN+ Y+ +LH L
Sbjct: 169 FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALC 228
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K A R + SEM EP T++I++ +C+E++L M + ++ + G +P +
Sbjct: 229 KNGKVGRA----RSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALK 496
++ LC+ ++ A + +++ G + +TL + G A F ++
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 497 IDKLRKTPLV 506
+++ P V
Sbjct: 344 MERKGYLPNV 353
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 175/370 (47%), Gaps = 2/370 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
+Q G K T +++AL++ K K ++V +M++R + + T +
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A ++ME ++P F++L+ +K ++ +M+ G+ PD + Y ++
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + L M E EPD VT+ LI+ +CK ++ A + M+ +
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P ++ +IN G +R D+ K K+ G P T+ +V Y S R +DA
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++EMK G+ P+S Y+ +++ + +++A + FR M+S+ G +P++ + ++ F
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAF 629
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
++ R AV M+ G+ P + + L+ AL +K +++M+ G +P
Sbjct: 630 GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Query: 472 NLFSTLKQAL 481
S L+ AL
Sbjct: 690 KARSMLRSAL 699
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 1/320 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A++ + GL + + ++ L S +A+ LF+++R G+ P ++Y LL
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ + L + EM+ PD TY +LI+AY A +++ A EM+ ++
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +FS L+ G + + ++ K+ G P+ YN V+ + +D A
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
D M G+ P+ T++ ++ K A +F M GC P +TY+I++ +
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYG 525
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
D+ER D + +M+++GILP + L+ + + + A + ++M VG++P +
Sbjct: 526 DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 473 LFSTLKQALIDAGMETTAIH 492
+++ L A G+ A++
Sbjct: 586 MYNALINAYAQRGLSEQAVN 605
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 5/304 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F +K L P +N L+ ++ +EKA L KMR G D +Y+++++
Sbjct: 185 EAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 236 SQQQNLLRVN--EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ + V + +E++ + E DV +I + K+ +A+ Q +
Sbjct: 243 TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA 302
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++I+ L R EA +E+ + +G P T YNA++ Y + + DA +V
Sbjct: 303 KTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV 362
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM++ GV P+ TY +++ + A + A V + M + +P + +L F D
Sbjct: 363 SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG-DVQPNSFVFSRLLAGFRD 421
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
V +M++ G+ P + V+I N LD A F +ML GI P
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT 481
Query: 474 FSTL 477
++TL
Sbjct: 482 WNTL 485
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E FE ME+ G P + +N +++ + + + L KM+ +G++P++ ++T L++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + E EMK +P Y LINAY + ++AV + M + P
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S ++LIN G D+R EA + K NG P+ TY ++ A + V
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
+EM G P+ + ++ L + T A
Sbjct: 678 EEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 201/450 (44%), Gaps = 40/450 (8%)
Query: 66 LSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFH 125
L S N + + +L + P V VL + V AL FF+WA++Q ++H ++
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERV-ALKFFYWADRQWRYRHDPMVYY 211
Query: 126 ALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
+++E L K + + ++ MK+R + T + ++++A++ M++
Sbjct: 212 SMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA 271
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW--------- 235
G++P + N +DV ++ +EKA ++M+ G+VP++ +Y ++ G+
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 236 --------------------------SQQQNLLRVNEVCREMKCE-CFEPDVVTYGILIN 268
+++ ++ V ++ ++M E PD VTY LI+
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA- 327
K DEA+ F + QEK +S +++ L + R+ EA + + + G
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
P+ TY AVV +C +D A +++ M G PN+ +Y +L+ + + + EA +
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
MS E P TY +I+ E +L V +M +G PG +L+ +LC
Sbjct: 512 M-NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 448 HANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ A K+ ++ L+ G F+T+
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 3/319 (0%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E + K P+V + +V+ C+ V+KA++L M G P+ SYT LL G +
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
L E+ + + P+ +TY ++++ + K EA EM K P P
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ L+ L D R EA +F E+ G A + V+ +C + +D A V+D+M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
+ TY ++ L K EA + ++M + G +PT TY ++ +C ++D
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK-GIDPTPVTYRTVIHRYCQMGKVD 681
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+A+ ++M +R ++ +I LC KL+ A ++L R A L
Sbjct: 682 DLVAILEKMISRQ--KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Query: 479 QALIDAGMETTAIHFALKI 497
+ + G+ +A A ++
Sbjct: 740 EGYLKKGVPLSAYKVACRM 758
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 169/369 (45%), Gaps = 8/369 (2%)
Query: 122 ESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF--- 178
ES H L+ +G++ + WN + + R LL + A++ F
Sbjct: 138 ESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWA 197
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
++ +Y P V + +++VL K+K + ++ + M+ RG+ ++++ ++ +S+
Sbjct: 198 DRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRA 255
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
L +V M+ EP+++ I+ + +A + ++A+ F MQ ++P+ +
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-K 357
+ +I G R++EA+E E + G P+ +Y ++G C R+ + ++ +M K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G+ P+ TY+ ++H L K EA F + + E G Y I+ C E R+
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEAL-WFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 418 DMEMAVWDQMRARGIL-PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFST 476
+ ++M ++G P + + +++ C ++D A K Q M G +P ++
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 477 LKQALIDAG 485
L + G
Sbjct: 495 LLNGMCRTG 503
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 6/311 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXX 161
AL F A+ +KGF+ + A++ AL K + +L+ +M + D T
Sbjct: 402 ALWFLKDAQ-EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+V +A + + M +G KP + L++ +C++ +A+E+ +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P+ +Y++++ G ++ L +V REM + F P V +L+ + C+ + EA
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
F E K + F+T+I+G + LD AL + + TY +V
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
R+ +A ++ +M G+ P TY ++H + + ++ +M S C
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR--- 697
Query: 402 STYDIILRLFC 412
+ Y+ ++ C
Sbjct: 698 TIYNQVIEKLC 708
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 193/425 (45%), Gaps = 26/425 (6%)
Query: 74 IDAALADLSVEVSPELVAEVLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEAL 131
+D+ L L ++ ++++E L+ S G L+ SFF W + KHS +S +I L
Sbjct: 34 VDSGL--LKSAITTQVISE-LSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILIL 90
Query: 132 GKIRQFKVIWNLVEDMKQRKLLT----------------RDTXXXXXXXXXXXXK---VK 172
K + FK L++ + QR+LL+ D K +
Sbjct: 91 TKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIN 150
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+++ FE++ GLKP + L++ L K + + ++F KM G+V ++ Y +L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S+ + + ++ EM+ + PD+ TY LI+ YCK + EA+ M+ +
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++ I+G + R+ EA + + K + A TY ++ YC +D+A R+
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRL 329
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ M+ G P TY+ IL L + +EA + MS + EP T + ++ +C
Sbjct: 330 REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK-KIEPDNITCNTLINAYC 388
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
E + + V +M G+ M+ + LI C +L+ A + M++ G P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 473 LFSTL 477
+S L
Sbjct: 449 TYSWL 453
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 182/415 (43%), Gaps = 8/415 (1%)
Query: 82 SVEVSPELVAEVLNKL----SNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQ 136
V PE V+ V + L + AG++ S + + + G K ++ L+ +L K R
Sbjct: 124 GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 137 FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF-EKMEKYGLKPEVSDFNK 195
+W + + M + ++ E E +ME+ G+ P++ +N
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+ V CK +A + D+M G+ P++ +Y + G+S++ + + RE+K +
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ VTY LI+ YC+ DEA+ M+ + P +++++ L D R+ EA
Sbjct: 304 -TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ P+ T N ++ AYC M A +V +M + G+ + +Y ++H
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K + A M E G P +TY ++ F ++ + D + ++ RG+
Sbjct: 423 CKVLELENAKEELFSMI-EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+ ++ LI +C ++D A F+ M G+ + +F+T+ A G T A
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+ E ME G P V +N ++ LC+ + +A L +M + + PD +
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + ++++ +V ++M + D+ +Y LI+ +CK + + A M EK
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P +S L++G + + DE + E+F+ G + Y ++ C ++D A
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+ + M++ G+ +S + + + + EA ++F M
Sbjct: 503 VLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA +M ++P+ N L++ CK + + A ++ KM GL D+ SY
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L E M + F P TY L++ + K DE E +++
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ LI + +++D A +E + G ++ + + AY + ++ +A
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
+ D M + N + Y I
Sbjct: 537 SALFDVMYNRRLMVNLKLYKSI 558
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 7/232 (3%)
Query: 113 KQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXX 168
+ +GF ++++++ L G+IR+ L+ +M +K+ + T
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREAN---RLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+ AV+ +KM + GLK ++ + L+ CK +E A+E M +G P +Y
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATY 450
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+ L++G+ Q + ++ E + DV Y LI CK ++ D A + M++
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
K ++ IF+T+ ++ EA ++ Y ++ +Y
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + ++ K G++P + ++ L+D CK ++ L++ M G PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G S+Q +L +M + +VV + LI+ +C+ ++DEA+ + M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 290 NMMPSPHIFSTLI---------------------------NGLGSD-------------- 308
+ P F+T++ N + +D
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
R+++A +F+ P+ TYN ++ YC R+D+A R+ + +K GPN+ T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
I++H L K A +F M+ E G +P TY ++ F ++ ++++M+
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+GI P + + ++I LC ++D A F Q +D + P ++ L + G
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 23/401 (5%)
Query: 85 VSPELVAE--VLNKLSNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIW 141
+SP +V ++ L G + +F + + ++G + S ++ +LI+ K + +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE-KMEKYGLKPEVSDFNKLVDVL 200
L EDM + + F KM ++ V FN L+D
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK----CECF 256
C+ ++A ++F M G+ PD+ ++T ++ + + C+ MK + F
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME------DAFCKHMKPTIGLQLF 560
Query: 257 E--------PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+ D+ ++I+ K + ++A F++ + E M P ++T+I G S
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+RLDEA +E K F P T T ++ C + MD A R+ M + G PN+ TY
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
++ K+ + ++ +F M E G P++ +Y II+ C R+D ++ Q
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+LP + + +LI C +L A ++ ML G++P
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 150/314 (47%), Gaps = 7/314 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + F+ ME+ G++P++ ++ L+D K+ + +LF + H+G+ D+ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + +L + V + M C+ P+VVTY ILI C+ + EA G Y ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M PS +S+LI+G L YE G+ P+ Y +V M A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R +M + N ++ ++ + EA VFR M G +P V+T+ ++R
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMR 539
Query: 410 L------FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ FC + + + ++D M+ I + V V+I L ++++ A K+F ++
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 464 DVGIRPPANLFSTL 477
+ + P ++T+
Sbjct: 600 EGKMEPDIVTYNTM 613
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 2/313 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A++ + + G + + NK++ L + +E A L + G P++ ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFC 290
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ ++ + R ++ + M+ EPD++ Y LI+ Y KA + + K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ +FS+ I+ L A Y++ G +P TY ++ C R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ + ++ + G+ P+ TY ++ K + ++++ M +MG P V Y +++
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVD 469
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ + M +M + I + VF LI C N+ D A K F+ M GI+P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 470 PANLFSTLKQALI 482
F+T+ + I
Sbjct: 530 DVATFTTVMRVSI 542
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 168/417 (40%), Gaps = 38/417 (9%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI--------------WNLVEDMKQ 149
AL +F WAE SF+ + L + F V +N++ ++
Sbjct: 86 ALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRD 141
Query: 150 RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
R L D V +A+E F + G+ ++++ L S V+
Sbjct: 142 RSL-DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200
Query: 210 QELFDKMRHRGLVPD-LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ FDK+ G+ P + ++ +L+ + + + + R + F +V+ N
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS----CN 256
Query: 269 AYCKAKKYDEAVGFYHEMQEK------NMMPSPHI--FSTLINGLGSDKRLDEALEFYEK 320
K D+ E+ + + P+P++ F TLING +D A + ++
Sbjct: 257 KVLKGLSVDQI-----EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+ G P+ Y+ ++ Y + + +++ + GV + + + +K+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
A V++RM + G P V TY I+++ C + R+ ++ Q+ RG+ P + +
Sbjct: 372 LATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
LI C L + ++ M+ +G P ++ L L G+ A+ F++K+
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 138 KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLV 197
K NL+E + ++T +T ++ EA FE ++ P L+
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLR---RLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
VLCK+ ++ A +F M +G P+ +Y L++ +S+ ++ ++ EM+ +
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P +V+Y I+I+ CK + DEA +H+ + ++P ++ LI G RL EA
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 318 YEKFKANGFAPE 329
YE NG P+
Sbjct: 770 YEHMLRNGVKPD 781
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 100/195 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A + F + + ++P++ +N ++ C + +++A+ +F+ ++ P+ + T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + M + +P+ VTYG L++ + K+ + + + EMQEK
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS +S +I+GL R+DEA + + P+ Y ++ YC R+ +A
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 350 YRVVDEMKQCGVGPN 364
+ + M + GV P+
Sbjct: 767 ALLYEHMLRNGVKPD 781
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F++M + G+KP+ + F ++ ++ ++A E F+KM G PD + +++ + +
Sbjct: 198 FDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR 257
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
N+ + + E + D VT+ LI Y + YD + Y EM+ + P+ I
Sbjct: 258 AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ LI+ +G KR +A Y+ NGF P TY A+V AY + DDA + EMK
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G+ Y+ +L R EA+ +F+ M + C+P T+ ++ ++ R+
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
A QMR G P + V +I A ++D + F Q+L++GI P
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 166/398 (41%), Gaps = 24/398 (6%)
Query: 109 HWAEKQKGFKHSTE--SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXX 165
W EK F + + A+I+A G+ + +L + + K + T
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
+ +E+M+ G+KP + +N+L+D + ++K +A+ ++ + G P+
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
+Y L+ + + + + REMK + V+ Y L++ + DEA + +
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 286 MQE-KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
M+ + P FS+LI R+ EA + + GF P +V+ Y +
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGC-EPTVST 403
++DD R D++ + G+ P+ R +L+ + + + + + +GC E
Sbjct: 471 QVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE--------IGKLIGCVEKAKPK 522
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILP-GMHV----FFVLISALCHANKLDAACKY 458
++++ +E+ + E V+ + + I G V LI + NKL+ AC+
Sbjct: 523 LGQVVKMLVEEQ--NCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEI 580
Query: 459 FQQMLD----VGIRPPANLFSTLKQALIDAGMETTAIH 492
Q L+ G++ + +L + G TA+H
Sbjct: 581 LQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALH 618
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 90 VAEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM 147
+A +++ AG +ALS + A +K ++ +F LI G + N+ E+M
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEK-WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 148 KQRKLLTRDTXXXXXXXXXXXXKVK---EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
K L + + K +A ++ + G P S + LV +++
Sbjct: 307 KA--LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTY 263
+ A ++ +M+ +GL + Y LL + + + E+ ++MK CE +PD T+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI Y + + EA +M+E P+ + +++I G K++D+ + +++
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 324 NGFAPE 329
G P+
Sbjct: 485 LGITPD 490
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K A+E + M+ G+ +V +N L+ LC+S + K L MR R + P+ +Y
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+S + +L +++ EM P+ VT+ LI+ + + EA+ ++ M+ K
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS + L++GL + D A FY + K NG TY ++ C + +D+A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+++EM + G+ P+ TY +++ K + A + R+ +G P Y ++
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVGLSPNGIIYSTLIY 521
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C L + +++ M G F VL+++LC A K+ A ++ + M GI P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 470 PANLFSTLKQALIDAG 485
F L ++G
Sbjct: 582 NTVSFDCLINGYGNSG 597
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 1/323 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA++ F ME GL P + L+D LCK+ + A+ + +M+ G+ +YT +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G + L + EM + +PD+VTY LIN +CK ++ A + +
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I+STLI L EA+ YE G + T+N +V + C + ++ +A
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ M G+ PN+ ++D +++ + +A+SVF M +++G PT TY +L+
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGL 628
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C L + A ++ L++A+C + L A F +M+ I P +
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 472 NLFSTLKQALIDAGMETTAIHFA 494
+++L L G AI FA
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFA 711
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++M K + P+V+ FN L++VLC S EK+ L KM G P + +Y +L + +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ E+ MK + + DV TY +LI+ C++ + + +M+++ + P+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++TLING ++ ++ A + + + G +P T+NA++ + +A ++ M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G+ P+ +Y ++L L K A + RM C + TY ++ C L
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFL 459
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
D + + ++M GI P + + LI+ C + A + ++ VG+ P ++STL
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 146/334 (43%), Gaps = 1/334 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++++E F M YG P V N ++ + KS +M R + PD+ ++ I
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + + + + ++M+ + P +VTY +++ YCK ++ A+ M+ K
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ LI+ L R+ + + P TYN ++ + ++ A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++++EM G+ PN T++ ++ I +EA +F M ++ G P+ +Y ++L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK-GLTPSEVSYGVLLDG 417
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
C D+ + +M+ G+ G + +I LC LD A +M GI P
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 471 ANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+S L G TA +I ++ +P
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 142/334 (42%), Gaps = 37/334 (11%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA E M G+ P F+ L++ S KA +FD+M G P +Y
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+G + +L + + + D V Y L+ A CK+ +AV + EM ++
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEK---------------------FKAN---- 324
+++P + +++LI+GL + A+ F ++ FKA
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 325 -----------GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
G P+ T NA++ Y +++ ++ EM GPN TY+I+LH
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
K + ++ ++R + ++ + ++L + C+ L++ + + RG+
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI-CESNMLEIGLKILKAFICRGVE 861
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ F +LIS C +++ A + M +GI
Sbjct: 862 VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y IL+ + ++ + E+ R M F P V T ++ + K+ + F EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++ + P F+ LIN L ++ +++ +K + +G+AP TYN V+ YC R
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A ++D MK GV + TY++++H L ++ + Y + R M M P TY+ +
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-IHPNEVTYNTL 344
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ F +E ++ + + ++M + G+ P F LI A K F M G+
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 468 RPPANLFSTLKQAL 481
P + L L
Sbjct: 405 TPSEVSYGVLLDGL 418
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 142/351 (40%), Gaps = 37/351 (10%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL---------- 242
+N L+ +CKS ++ KA LF +M R ++PD +YT L+ G ++ +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 243 -RVNEVCREMKCECF-------------------------EPDVVTYGILINAYCKAKKY 276
R N + ++ CF PD+VT +I+ Y + K
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
++ EM +N P+ ++ L++G K + + Y NG P+ T +++
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
V C S ++ +++ GV + T+++++ A+ + + M+S +G
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS-LG 894
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
T D ++ + R V +M +GI P + LI+ LC + A
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 457 KYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
++M+ I PP S + +AL G A + K++ P +A
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 148/360 (41%), Gaps = 5/360 (1%)
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF-- 178
T ++ L+ A+ K +L +M QR +L D+ K K +
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP-DSYTYTSLISGLCRKGKTVIAILFA 711
Query: 179 -EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E + + P + VD + K+ + ++M + G PD+ + +++G+S+
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + N++ EM + P++ TY IL++ Y K K + Y + ++P
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+L+ G+ L+ L+ + F G + T+N ++ C + ++ A+ +V M
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G+ + T D ++ L + QE+ V MS + G P Y ++ C +
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRKYIGLINGLCRVGDI 950
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
V ++M A I P ++ AL K D A + ML + + P F+TL
Sbjct: 951 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 1010
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
AL F+ E KG S S+ L++ L K +F + MK+ + + R T
Sbjct: 392 ALKMFYMME-AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+ EAV +M K G+ P++ ++ L++ CK + A+E+ ++ GL
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 223 PDLKSYTIL---------------------LEGWSQQQ---NLLRVNEVCRE-------- 250
P+ Y+ L LEG ++ N+L V +C+
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL-VTSLCKAGKVAEAEE 569
Query: 251 -MKC---ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
M+C + P+ V++ LIN Y + + +A + EM + P+ + +L+ GL
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
L EA +F + A A +T YN ++ A C S + A + EM Q + P+S
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 367 TYDIILHHLIKARTT 381
TY ++ L + T
Sbjct: 690 TYTSLISGLCRKGKT 704
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 137/346 (39%), Gaps = 36/346 (10%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K + E+M+ G P++ N ++D + +EK +L +M ++ P+L +Y IL
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 232 LEGWSQQQ----------------------------------NLLRVN-EVCREMKCECF 256
L G+S+++ N+L + ++ + C
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
E D T+ +LI+ C + + A M + +++ L + R E+
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+ G +PE+ Y ++ C + A+ V +EM + P + ++ L
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K EA + R M +M PT++++ ++ L C + + + M G+ +
Sbjct: 981 KCGKADEATLLLRFML-KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
+ VLI+ LC + A + +++M G A + L + L+
Sbjct: 1040 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+P ++ LI + + ++LE + GF P T NA++G+ S +
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ EM + + P+ T++I+++ L + +++ + ++M G PT+ TY+ +L +C
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS-GYAPTIVTYNTVLHWYC 279
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ R + + D M+++G+ + + +LI LC +N++ + M I P
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 473 LFSTLKQALIDAG 485
++TL + G
Sbjct: 340 TYNTLINGFSNEG 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + + M G+ + + +V VL ++ ++++ + +M +G+ P+ + Y
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + ++ V EM P V ++ A K K DEA M +
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P+ F+TL++ + + EALE G + +YN ++ C M A
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+ + +EMK G N+ TY ++ L+ T
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGLLARET 1089
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 8/256 (3%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G++ + FN L+ C + + A +L M G+ D + ++ ++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V EM + P+ Y LIN C+ A EM + P S ++
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 305 LGSDKRLDEA---LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
L + DEA L F K K P ++ ++ C + + +A + M CG+
Sbjct: 979 LAKCGKADEATLLLRFMLKMK---LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR-LFCDEERLDME 420
+ +Y++++ L A+ ++ M + G +TY ++R L E
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGD-GFLANATTYKALIRGLLARETAFSGA 1094
Query: 421 MAVWDQMRARGILPGM 436
+ + ARG + M
Sbjct: 1095 DIILKDLLARGFITSM 1110
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA++ F M YG+KP+V+ F ++ V +E+A LF +M GL PD +Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + ++ M+ D+ ++I+ K + ++A F++ + E
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M P ++T+I G S +RLDEA +E K F P T T ++ C + MD A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R+ M + G PN+ TY ++ K+ + ++ +F M E G P++ +Y II+
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIID 749
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C R+D ++ Q +LP + + +LI C +L A ++ ML G++P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 148/308 (48%), Gaps = 1/308 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + ++ K G++P + ++ L+D CK ++ L++ M G PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G S+Q +L +M + +VV + LI+ +C+ ++DEA+ + M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P F+T++ + RL+EAL + + G P+ Y ++ A+C M+
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ D M++ + + ++++H L K ++A F + E EP + TY+ ++
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMIC 644
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C RLD +++ ++ P +LI LC N +D A + F M + G +P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 470 PANLFSTL 477
A + L
Sbjct: 705 NAVTYGCL 712
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 178/405 (43%), Gaps = 5/405 (1%)
Query: 85 VSPELVAE--VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIW 141
+SP +V ++ L G + +F + + ++G + S ++ +LI+ K + +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE-KMEKYGLKPEVSDFNKLVDVL 200
L EDM + + F KM ++ V FN L+D
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
C+ ++A ++F M G+ PD+ ++T ++ + L + M EPD
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+ Y LI+A+CK K + + MQ + + + +I+ L R+++A +F+
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
P+ TYN ++ YC R+D+A R+ + +K GPN+ T I++H L K
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
A +F M+ E G +P TY ++ F ++ ++++M+ +GI P + +
Sbjct: 687 MDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
++I LC ++D A F Q +D + P ++ L + G
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 156/343 (45%), Gaps = 36/343 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + F+ ME+ G++P++ ++ L+D K+ + +LF + H+G+ D+ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + +L + V + M C+ P+VVTY ILI C+ + EA G Y ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY---------------- 333
M PS +S+LI+G L YE G+ P+ Y
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 334 -------------------NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
N+++ +C R D+A +V M G+ P+ T+ ++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
I +EA +F RM +MG EP Y ++ FC + + + ++D M+ I
Sbjct: 541 SIMEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ V V+I L ++++ A K+F +++ + P ++T+
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 148/335 (44%), Gaps = 2/335 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A++ + + G + + NK++ L + +E A L + G P++ ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFC 290
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ ++ + R ++ + M+ EPD++ Y LI+ Y KA + + K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ +FS+ I+ L A Y++ G +P TY ++ C R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ + ++ + G+ P+ TY ++ K + ++++ M +MG P V Y +++
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVD 469
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ + M +M + I + VF LI C N+ D A K F+ M GI+P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
F+T+ + I G A+ ++ K+ P
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 138 KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLV 197
K NL+E + ++T +T ++ EA FE ++ P L+
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLR---RLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
VLCK+ ++ A +F M +G P+ +Y L++ +S+ ++ ++ EM+ +
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P +V+Y I+I+ CK + DEA +H+ + ++P ++ LI G RL EA
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 318 YEKFKANGFAPE 329
YE NG P+
Sbjct: 799 YEHMLRNGVKPD 810
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 100/195 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A + F + + ++P++ +N ++ C + +++A+ +F+ ++ P+ + T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + M + +P+ VTYG L++ + K+ + + + EMQEK
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS +S +I+GL R+DEA + + P+ Y ++ YC R+ +A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 350 YRVVDEMKQCGVGPN 364
+ + M + GV P+
Sbjct: 796 ALLYEHMLRNGVKPD 810
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 6/327 (1%)
Query: 123 SFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
S++ LI+ L GKI + +IW L+ + + T V +A+ +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMP--AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++E G +V + ++D LCK K +E+A L +M G+ + L+ G +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
L + REM P VV+Y ILI CKA K+ EA F EM E P +S
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L+ GL D+++D ALE + +F +G + +N ++ C ++DDA V+ M+
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
N TY+ ++ K + A ++ M +MG +P + +Y+ I++ C +
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYM-YKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 420 EMAVWDQMRARGILPGMHVFFVLISAL 446
M +D R GI P ++ + +L+ A+
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 184/410 (44%), Gaps = 6/410 (1%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
+SP+ V ++L N A + F A + G+ HS +H ++ L + R + +V
Sbjct: 8 LSPKHVLKLLKSEKNPRA-AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66
Query: 145 EDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCK 202
E ++ ++ D +A++ F++M E +G +P + +N L++ +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+K K + LF G+ P+L++Y +L++ +++ + M E F+PDV +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK-F 321
Y +IN KA K D+A+ + EM E+ + P ++ LI+G +K A+E +++
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
+ + P T+N ++ R+DD ++ + MKQ + TY ++H L A
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
+A SVF + E V TY+ +L FC ++ + +W M + + + + +
Sbjct: 307 DKAESVFNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNI 364
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
LI L K+D A ++ M G + L G A+
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 185/401 (46%), Gaps = 11/401 (2%)
Query: 91 AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKV---IWN-LV 144
+ V+N L+ AG L AL F ++G ++ LI+ K + K +W+ L+
Sbjct: 188 STVINDLAKAGKLDDALELFD-EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 145 EDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
ED T +V + ++ +E+M++ + ++ ++ L+ LC +
Sbjct: 247 EDSSVYP--NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
+V+KA+ +F+++ R D+ +Y +L G+ + + E+ R M+ + ++V+Y
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYN 363
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
ILI + K DEA + M K + I+GL + +++AL ++ +++
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
G + Y +++ C R+++A +V EM + GV NS + ++ LI+ EA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
S F R + GC PTV +Y+I++ C + A +M G P + + +L+
Sbjct: 484 -SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
LC K+D A + + Q L G+ + + L L G
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 166/371 (44%), Gaps = 7/371 (1%)
Query: 112 EKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXK 170
E++K + H L +A G + + + ++N +++ K ++T +T K
Sbjct: 285 EREKDLYTYSSLIHGLCDA-GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG---K 340
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KE++E + ME + +N L+ L ++ +++A ++ M +G D +Y I
Sbjct: 341 IKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ G + + V +E++ DV Y +I+ CK K+ +EA EM +
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ + H+ + LI GL D RL EA F + NG P +YN ++ C + + +A
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
V EM + G P+ +TY I+L L + R A ++ + + G E V ++I++
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF-LQSGLETDVMMHNILIHG 578
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
C +LD M V M R + + L+ + A + M +G++P
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 471 ANLFSTLKQAL 481
++T+ + L
Sbjct: 639 IISYNTIMKGL 649
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 3/345 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX--XXXXKVKE 173
G+ ++ +F ALI A G+ + ++ MK+ L + K+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
+ F++M++ G++P+ FN L+ V + E A+ LFD+M +R + D+ SY LL+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + E+ +M + P+VV+Y +I+ + KA ++DEA+ + EM+ +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TL++ R +EAL+ + + G + TYNA++G Y + D+ +V
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EMK+ V PN TY ++ K +EA +FR S G V Y ++ C
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS-AGLRADVVLYSALIDALCK 561
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
+ +++ D+M GI P + + +I A + +D + Y
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 172/372 (46%), Gaps = 23/372 (6%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
++ G + +F++L+ + ++ NL ++M R++ +D + +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI-EQDVFSYNTLLDAICKGGQ 389
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A E +M + P V ++ ++D K+ ++A LF +MR+ G+ D SY
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL +++ ++ REM + DVVTY L+ Y K KYDE + EM+ ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P+ +STLI+G EA+E + +FK+ G + Y+A++ A C + + A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA--YSVFRRM--SSEMGCEPTVSTYDI 406
++DEM + G+ PN TY+ I+ ++ T + YS + SS T + +
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR 629
Query: 407 ILRLF--------------CDE--ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
+++LF C+E + L + V+ +M I P + F +++A N
Sbjct: 630 VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCN 689
Query: 451 KLDAACKYFQQM 462
+ A +++
Sbjct: 690 SFEDASMLLEEL 701
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 151/334 (45%), Gaps = 5/334 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV A FE G V F+ L+ +S E+A +F+ M+ GL P+L +Y
Sbjct: 248 KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307
Query: 230 ILLEGWSQQ-QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+++ + +V + EM+ +PD +T+ L+ + ++ A + EM
Sbjct: 308 AVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN 367
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + ++TL++ + ++D A E + P +Y+ V+ + + R D+
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + EM+ G+ + +Y+ +L K ++EA + R M+S +G + V TY+ +L
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS-VGIKKDVVTYNALL 486
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
+ + + D V+ +M+ +LP + + LI A + F++ G+R
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 469 PPANLFSTLKQALIDAGMETTAIHFALKIDKLRK 502
L+S L AL G+ +A+ ID++ K
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSL---IDEMTK 577
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 277 DEAVGFYH--EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
D+AVGFY +E+ + S +I+ LG ++ A +E A G+ ++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
A++ AY S ++A V + MK+ G+ PN TY+ ++ K + + F
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
G +P T++ +L + + ++D+M R I + + L+ A+C ++D
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
A + QM I P +ST+ AG
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 156/338 (46%), Gaps = 2/338 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA E KME G+ P V +N ++ C+ K+++ A+ +F + +GL P+ +Y+
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QE 288
IL++G + + EV M E + V Y +IN CK + +A M +E
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K + S ++++I+G + +D A+ YE+ NG +P TY +++ C + RMD
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A + DEMK GV + Y ++ K + A ++F + E G P+ Y+ ++
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLI 696
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
F + + + ++ +M G+ + + LI L L A + + +M VG+
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 469 PPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLV 506
P +++ + L G + ++ K TP V
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 170/393 (43%), Gaps = 40/393 (10%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXKV 171
++G + + + ++A K + +L+ +MK++KL +++T +
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+A+ ++M G+ V L+ CK+ + A LFDKM G P+ ++++L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + + + + E ++M+ P V +I + K +K++EA+ + E E +
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + +T+++ L + DEA E K ++ G P +YN V+ +C MD A
Sbjct: 441 -ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
V + + G+ PN+ TY I++ + Q A V M+S E Y I+
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS-NIEVNGVVYQTIINGL 558
Query: 412 C----------------DEERL--------------------DMEMAVWDQMRARGILPG 435
C +E+RL D +A +++M GI P
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
+ + L++ LC N++D A + +M + G++
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A+E ++M+ G+K ++ + L+D CK ++E A LF ++ GL P Y
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ N++ ++ ++M + D+ TY LI+ K A Y EMQ
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P I++ ++NGL + + ++ +E+ K N P YNAV+ + +D+A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+R+ DEM G+ P+ T+DI++
Sbjct: 814 FRLHDEMLDKGILPDGATFDILV 836
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N ++D K ++ A +++M G+ P++ +YT L+ G + + + E+ EMK
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ + D+ YG LI+ +CK + A + E+ E+ + PS I+++LI+G + +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
AL+ Y+K +G + TY ++ + A + EM+ G+ P+ Y +I+
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ L K + +F M P V Y+ ++ E LD + D+M +GI
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKN-NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 433 LPGMHVFFVLISA 445
LP F +L+S
Sbjct: 826 LPDGATFDILVSG 838
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL-VPDLKSY 228
K EA+E + + G +P+ ++ V CK+ + A L +M+ + L VP ++Y
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T ++ +Q N+ + EM + +VV LI +CK A+ + +M++
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ FS LI + +++ALEFY+K + G P + ++ + + ++
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
A ++ DE + G+ N + IL L K T EA + +M S G P V +Y+ ++
Sbjct: 428 ALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESR-GIGPNVVSYNNVM 485
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
C ++ +D+ V+ + +G+ P + + +LI + A + M I
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 469 PPANLFSTLKQALIDAGMETTA 490
++ T+ L G + A
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKA 567
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKM 181
+ +I L K+ Q L+ +M + K L + ++ AV +E+M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+ P V + L++ LCK+ +++A E+ D+M+++G+ D+ +Y L++G+ ++ N+
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ + E+ E P Y LI+ + A+ Y +M + + ++TL
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+GL D L A E Y + +A G P+ Y +V + ++ +EMK+ V
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM---GCEPTVSTYDIIL 408
PN Y+ ++ + EA+ R+ EM G P +T+DI++
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAF----RLHDEMLDKGILPDGATFDILV 836
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 180/439 (41%), Gaps = 39/439 (8%)
Query: 55 HTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQ 114
P K+ +LS P DA++ D+ +LN+ +N AL F++WA
Sbjct: 53 ENPVTSKV-SLLSAKPEQKDDASVIDV-----------LLNRRNNPEA-ALRFYNWARPW 99
Query: 115 KGFKHSTESFHALI-------EALGKIRQFKV---------------IWNLVEDMKQRKL 152
+G + F LI E G+ + + LV+ K
Sbjct: 100 RGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGF 159
Query: 153 -LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE 211
+ + AV+ +M + + P N+ + L + S+ +A+E
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
L+ +M G+ D + +L+ +++ EV EPD + Y + + A C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 272 KAKKYDEAVGFYHEMQEKNM-MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
K A EM+EK + +PS ++++I +D+A+ ++ ++G +
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRR 390
+++ +C + + A + D+M++ G PNS T+ +++ K ++A +++
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 391 MSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
M +G P+V I++ + ++ + + ++D+ G L + V ++S LC
Sbjct: 400 MEV-LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQG 457
Query: 451 KLDAACKYFQQMLDVGIRP 469
K D A + +M GI P
Sbjct: 458 KTDEATELLSKMESRGIGP 476
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 145/345 (42%), Gaps = 26/345 (7%)
Query: 187 KPEVSDFNKLVDVLCKSKSV-EKAQELFDKMR-HRGLVPDLKSYTILL-------EGWSQ 237
KPE D ++DVL ++ E A ++ R RG D + +L+ E + +
Sbjct: 66 KPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGR 125
Query: 238 QQNLL---------------RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+LL V+++ K FE + + L+NAY K ++ D AV
Sbjct: 126 ASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDI 185
Query: 283 YHEMQEKNMMP-SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
++M E +++P P++ TL + L L EA E Y + A G + T ++ A
Sbjct: 186 VNQMLELDVIPFFPYVNRTL-SALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
+ +A V+ + G P+S Y + + K A S+ R M + C P+
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
TY ++ + +D + + D+M + GI + LI+ C N L +A F +
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 462 MLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLV 506
M G P + FS L + G A+ F K++ L TP V
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K KG K ++ ALI+ K + L ++ + L ++ +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ ++KM K GL+ ++ + L+D L K ++ A EL+ +M+ GLVPD YT++
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G S++ ++V ++ EMK P+V+ Y +I + + DEA + EM +K +
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 292 MPSPHIFSTLING 304
+P F L++G
Sbjct: 826 LPDGATFDILVSG 838
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 165/366 (45%), Gaps = 11/366 (3%)
Query: 76 AALADLSVEVSPELVAEVL---------NKLSNAGVLALSFFHWAEKQKGFKHSTESFHA 126
+ L +L+V VS LV EVL + + LA FF W+ +Q+ F+H+ S+H
Sbjct: 95 SVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHL 154
Query: 127 LIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG 185
L++ + ++K +W LV++M Q T T K+AV F K + +
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFN 214
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+P +N +++ L K + + ++ +M G PD+ +Y ILL + + R +
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ EM + F PD TY IL++ K K A+ + M+E + PS ++TLI+GL
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
L+ F ++ G P+ Y ++ Y S +D A + EM G PN
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
TY+ ++ L A +EA + + M S GC P Y ++ +L V
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESR-GCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Query: 426 QMRARG 431
+M +G
Sbjct: 454 EMVKKG 459
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 34/295 (11%)
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ SY +L++ +++ + + EM + F T+ +LI + +A +AV +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+ + N P H ++ ++N L K+ Y++ +GF+P+ TYN ++
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS------------ 392
+MD R+ DEM + G P+S TY+I+LH L K A + M
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 393 -------------------SEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
EM GC P V Y +++ + LD ++ +M +
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
G LP + + +I LC A + AC ++M G P ++STL L AG
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 157/329 (47%), Gaps = 4/329 (1%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
SP V +++ S+ +LA F +A +Q F+HS S LI LG+ R F +I +++
Sbjct: 50 SPTRVQKLIASQSDP-LLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 146 DMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
+ LT + ++ + TF KM ++ P+ N+++DVL +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 205 S-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++KA ELF R G++P+ +SY +L++ + +L ++ +M PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
ILI +C+ + + A+ +M K +P ++TL+N L +L EA + + K
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQE 383
G P+ YN ++ +C R DA +V+D+M G PNS +Y ++ L E
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 384 AYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
M S+ G P S + +++ FC
Sbjct: 349 GKKYLEEMISK-GFSPHFSVSNCLVKGFC 376
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 3/258 (1%)
Query: 87 PELVAEVLNKL-SNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P+ + +L+ L S+ G L +F + + G +T S++ L++A + + L
Sbjct: 154 PKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF 213
Query: 145 EDMKQRKLLTR-DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
M +R ++ D+ +V A+E + M G P+ + L++ LC+
Sbjct: 214 GKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 204 KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
+ +A +L +M+ +G PDL Y ++ G+ ++ + +V +M P+ V+Y
Sbjct: 274 TQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSY 333
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI C +DE + EM K P + + L+ G S +++EA + E
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Query: 324 NGFAPETPTYNAVVGAYC 341
NG + T+ V+ C
Sbjct: 394 NGETLHSDTWEMVIPLIC 411
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
F + Q+ N S LI LG + + + K +++G+ + ++ Y
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART-TQEAYSVFRRMSSEMGCEPT 400
+ + +M + P + + IL L+ R Q+A+ +F+ S G P
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS-SRLHGVMPN 189
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
+Y+++++ FC + L + ++ +M R ++P + + +LI C +++ A +
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 461 QMLDVGIRPPANLFSTLKQAL 481
ML+ G P ++TL +L
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSL 270
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 178/394 (45%), Gaps = 7/394 (1%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXXK 170
+G S S+ ALI A G+ +++ L++ MK K+ LT +T
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL--D 227
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ + F +M G++P++ +N L+ ++A+ +F M G+VPDL +Y+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+E + + + L +V ++ EM PD+ +Y +L+ AY K+ EA+G +H+MQ
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + +S L+N G R D+ + + + K++ P+ TYN ++ + +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ +M + + P+ TY+ I+ K ++A + + M++ P+ Y ++
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEA 466
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F + + ++ M G P + F L+ + + + +++D GI
Sbjct: 467 FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Query: 471 ANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ F+ +A G A+ + ++K R P
Sbjct: 527 RDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 2/305 (0%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
KP + ++ +L + ++K E+FD+M +G+ + SYT L+ + + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAK-KYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ MK E P ++TY +INA + ++ +G + EM+ + + P ++TL++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
DEA + G P+ TY+ +V + R++ ++ EM G P+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 366 RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
+Y+++L K+ + +EA VF +M + GC P +TY ++L LF R D ++
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+M++ P + +LI F M++ I P + + A G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 486 METTA 490
+ A
Sbjct: 437 LHEDA 441
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 148/321 (46%), Gaps = 8/321 (2%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE- 233
+E F++M G+ V + L++ ++ E + EL D+M++ + P + +Y ++
Sbjct: 161 LEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA 220
Query: 234 ---GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
G + LL + EM+ E +PD+VTY L++A DEA + M +
Sbjct: 221 CARGGLDWEGLL---GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P +S L+ G +RL++ + + + G P+ +YN ++ AY S + +A
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
V +M+ G PN+ TY ++L+ ++ + +F M S +P +TY+I++ +
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEV 396
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F + + ++ M I P M + +I A + A K Q M I P
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 471 ANLFSTLKQALIDAGMETTAI 491
+ ++ + +A A + A+
Sbjct: 457 SKAYTGVIEAFGQAALYEEAL 477
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 145/328 (44%), Gaps = 34/328 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++ + +M G P+++ +N L++ KS S+++A +F +M+ G P+ +Y+
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+LL + Q V ++ EMK +PD TY ILI + + + E V +H+M E+
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P + +I G ++A + + AN P + Y V+ A+ + ++A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-----------------S 392
+ M + G P+ T+ +L+ + +E+ ++ R+ +
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 393 SEMG-----------------CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ G C+P T + +L ++ +D +++M+A ILP
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPS 596
Query: 436 MHVFFVLISALCHANKLDAACKYFQQML 463
+ + ++++ + D + ++ML
Sbjct: 597 IMCYCMMLAVYGKTERWDDVNELLEEML 624
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ F M + G P + F+ L+ + V++++ + ++ G+ + ++
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + Q + +M+ +PD T +++ Y A+ DE + EM+ ++
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY- 350
+PS + ++ G +R D+ E E+ +N + V+G DD+
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN----RVSNIHQVIGQMIKGDYDDDSNW 649
Query: 351 ----RVVDEMKQCGVGPNSRTYDIILHHL 375
V+D++ G G R Y+ +L L
Sbjct: 650 QIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 110/265 (41%), Gaps = 11/265 (4%)
Query: 120 STESFHALIEALGKIRQFK---VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
S++++ +IEA G+ ++ V +N + ++ + +T VKE+
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI--ETFHSLLYSFARGGLVKESEA 513
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
++ G+ FN ++ + E+A + + M PD ++ +L +S
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ + E EMK P ++ Y +++ Y K +++D+ EM +
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQ 633
Query: 297 IFSTLINGLGSDKRLDEALEFY-EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ +I G D + +E+ +K + G YNA++ A W + + A RV++E
Sbjct: 634 VIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNE 693
Query: 356 MKQCGVGP-----NSRTYDIILHHL 375
+ G+ P N + + +H +
Sbjct: 694 ATKRGLFPELFRKNKLVWSVDVHRM 718
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 212/501 (42%), Gaps = 56/501 (11%)
Query: 42 NLSGSLRIHTLIPHTPHADKICKILSKSPN---STIDAALADL--SVEVSPELVA-EVLN 95
NL H L +P ++ + L + PN +D+ L++L + PE + E+L
Sbjct: 85 NLGKPWSYHGL---SPQGQQVLRSLIE-PNFDSGQLDSVLSELFEPFKDKPESTSSELLA 140
Query: 96 KLSNAGV-----LALSFFHWAEKQKGFKHSTES--FHALIEALGKIRQFKVIWNLVEDMK 148
L G LAL F W KQK ++ ++ +I LGK + N+ ++
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 149 QRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVL------- 200
+ L + + +EAV F+KME+ G KP + +N +++V
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 201 ----------------------------CKSKSV-EKAQELFDKMRHRGLVPDLKSYTIL 231
CK S+ ++A ++F++M+ G D +Y L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+ + + +V EM F P +VTY LI+AY + DEA+ ++M EK
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++TL++G +++ A+ +E+ + G P T+NA + Y + + +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ DE+ CG+ P+ T++ +L + E VF+ M G P T++ ++ +
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAY 499
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
+ M V+ +M G+ P + + +++AL + + K +M D +P
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 472 NLFSTLKQALIDAGMETTAIH 492
+ +L A + G E +H
Sbjct: 560 LTYCSLLHAYAN-GKEIGLMH 579
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 182/395 (46%), Gaps = 19/395 (4%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-- 148
+L+ AG + A+S F + G K + +F+A I+ G +F + + +++
Sbjct: 390 LLSGFERAGKVESAMSIFE-EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 149 --QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
++T +T +V F++M++ G PE FN L+ + S
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSG---VFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E+A ++ +M G+ PDL +Y +L ++ + +V EM+ +P+ +TY L
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 267 INAYCKAKKYDEAVGFYHEMQEK----NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
++AY K+ +G H + E+ + P + TL+ L EA + + K
Sbjct: 566 LHAYANGKE----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
GF+P+ T N++V Y + A V+D MK+ G P+ TY+ +++ ++
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
++ + R + ++ G +P + +Y+ ++ +C R+ ++ +MR GI+P + +
Sbjct: 682 KSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
I + + + A + M+ G RP N ++++
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 81 LSVEVSPELVA--EVLNKLSNAGVLALSFFHWAEKQKGFKHSTE-SFHALIEALGKIRQF 137
L V+P+L VL L+ G+ S AE + G E ++ +L+ A ++
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 138 KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKV-KEAVETFEKMEKYGLKPEVSDFNKL 196
++ +L E++ + R + EA F ++++ G P+++ N +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
V + + + V KA + D M+ RG P + +Y L+ S+ + + E+ RE+ +
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
+PD+++Y +I AYC+ + +A + EM+ ++P ++T I +D +EA+
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+G P TYN++V YC R D+A V++++
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 172/369 (46%), Gaps = 7/369 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX--XXXXXXXXXXXKV 171
++G K S ++ L+ AL + + F + +L+ + ++ L DT +
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV-EKNGLKPDTILFNAIINASSESGNL 405
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTI 230
+A++ FEKM++ G KP S FN L+ K +E++ L D M R L P+ ++ I
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG-FYHEMQEK 289
L++ W Q+ + + +M+ +PDVVT+ L AY + A M
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ T++NG + +++EAL F+ + K G P +N+++ + MD
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
VVD M++ GV P+ T+ +++ + ++ M E G +P + + I+ +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML-EGGIDPDIHAFSILAK 644
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD-VGIR 468
+ + + +QMR G+ P + ++ +IS C A ++ A + +++M VG+
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 469 PPANLFSTL 477
P + TL
Sbjct: 705 PNLTTYETL 713
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 150/300 (50%), Gaps = 5/300 (1%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
+V KL++ L + ++A +F+ + G P L +YT L+ ++Q++ + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+++ +PD + + +INA ++ D+A+ + +M+E P+ F+TLI G G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 309 KRLDEALEFYE-KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+L+E+ + + P T N +V A+C ++++A+ +V +M+ GV P+ T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 368 YDII--LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
++ + + I + T E + R + +++ +P V T I+ +C+E +++ + +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKV--KPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+M+ G+ P + VF LI + N +D + M + G++P FSTL A G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 167/373 (44%), Gaps = 12/373 (3%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWN-LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ T+ + LIE G+ ++ I+N L+E+ + L+T T + +
Sbjct: 320 RSRTKLMNGLIER-GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL---LS 375
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
K+EK GLKP+ FN +++ +S ++++A ++F+KM+ G P ++ L++G+
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 237 QQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ L + + M + E +P+ T IL+ A+C +K +EA ++MQ + P
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 296 HIFSTLING---LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
F+TL +GS ++ + + N P T +V YC +M++A R
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
MK+ GV PN ++ ++ + V M E G +P V T+ ++ +
Sbjct: 554 FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME-EFGVKPDVVTFSTLMNAWS 612
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ ++ M GI P +H F +L A + + A + QM G+RP
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 473 LFSTLKQALIDAG 485
+++ + AG
Sbjct: 673 IYTQIISGWCSAG 685
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 152/362 (41%), Gaps = 47/362 (12%)
Query: 89 LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVED 146
L ++N S +G L A+ F K+ G K + +F+ LI+ GKI + + L++
Sbjct: 391 LFNAIINASSESGNLDQAMKIFE-KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 147 MKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL-------- 196
M + ++L + T K++EA KM+ YG+KP+V FN L
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 197 ----------------------------VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
V+ C+ +E+A F +M+ G+ P+L +
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L++G+ ++ V EV M+ +PDVVT+ L+NA+ Y +M E
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P H FS L G ++A + + + G P Y ++ +C + M
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 349 AYRVVDEMKQCGV---GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
A +V +M CG+ PN TY+ ++ +A+ +A + + M + PT T
Sbjct: 690 AMQVYKKM--CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK-NVVPTRKTMQ 746
Query: 406 II 407
+I
Sbjct: 747 LI 748
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E + ME++G+KP+V F+ L++ +++ +E++ M G+ PD+ +++IL +G+
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNMMPS 294
++ + ++ +M+ P+VV Y +I+ +C A + +A+ Y +M + P+
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ TLI G G K+ +A E + + P T + +
Sbjct: 707 LTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXX 162
AL FF+ K+ G + F++LI+ I + +V+ M++ + T
Sbjct: 550 ALRFFY-RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+K E + M + G+ P++ F+ L ++ EKA+++ ++MR G+
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC--FEPDVVTYGILINAYCKAKKYDEAV 280
P++ YT ++ GW + + +V ++M C P++ TY LI + +AK+ +A
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYKKM-CGIVGLSPNLTTYETLIWGFGEAKQPWKAE 727
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M+ KN++P+ + +G S
Sbjct: 728 ELLKDMEGKNVVPTRKTMQLIADGWKS 754
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 55/439 (12%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L LS + V VL K+ +L+L FF+WA+ + HS E+ ++ L K R+F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 138 KVIWNLVEDMKQRKLL-------------------TRDTXXXXXXXXXXXXKVKEAVETF 178
K +++ D+ + T K + A +TF
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+M+ YG P V N + L V+ A + +MR + P+ + +++ G+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 239 QNLLRVNEVCREMK------------------CE-----------------CFEPDVVTY 263
L + E+ ++M+ CE +P+VVT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI+ +C+A K EA + EM+ N+ P+ ++TLING + A FYE
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQE 383
NG + TYNA++ C + A + V E+ + + PNS T+ ++ +
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 384 AYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
+ +++ M GC P T+++++ FC E D V +M R I +
Sbjct: 432 GFELYKSMIRS-GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 444 SALCHANKLDAACKYFQQM 462
+ L H K K Q+M
Sbjct: 491 NGLKHQGKDQLVKKLLQEM 509
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 265 ILINAYCK--AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+L+N AK +D + Y E +P +F +L K+ A + + + K
Sbjct: 141 VLVNGGVDLPAKVFDALLYSYRECDS-----TPRVFDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
GF P + NA + + R+D A R EM++C + PN T ++++ ++
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+ + + M +G T +Y+ ++ C++ L + + + M G+ P + F L
Sbjct: 256 KGIELLQDME-RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 314
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
I C A KL A K F +M V + P ++TL G A F
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
L + KK+ A + +M++ +P+ + ++ L R+D AL FY + +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
+P T N V+ YC S ++D ++ +M++ G R D+ + LI +
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF----RATDVSYNTLIAGHCEKGLL 289
Query: 386 SV---FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
S + M + G +P V T++ ++ FC +L V+ +M+A + P + L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRK 502
I+ + A ++++ M+ GI+ ++ L L A F ++DK
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 503 TP 504
P
Sbjct: 410 VP 411
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 55/439 (12%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L LS + V VL K+ +L+L FF+WA+ + HS E+ ++ L K R+F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 138 KVIWNLVEDMKQRKLL-------------------TRDTXXXXXXXXXXXXKVKEAVETF 178
K +++ D+ + T K + A +TF
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+M+ YG P V N + L V+ A + +MR + P+ + +++ G+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 239 QNLLRVNEVCREMK------------------CE-----------------CFEPDVVTY 263
L + E+ ++M+ CE +P+VVT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI+ +C+A K EA + EM+ N+ P+ ++TLING + A FYE
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQE 383
NG + TYNA++ C + A + V E+ + + PNS T+ ++ +
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 384 AYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
+ +++ M GC P T+++++ FC E D V +M R I +
Sbjct: 432 GFELYKSMIRS-GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 444 SALCHANKLDAACKYFQQM 462
+ L H K K Q+M
Sbjct: 491 NGLKHQGKDQLVKKLLQEM 509
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 265 ILINAYCK--AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+L+N AK +D + Y E +P +F +L K+ A + + + K
Sbjct: 141 VLVNGGVDLPAKVFDALLYSYRECDS-----TPRVFDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
GF P + NA + + R+D A R EM++C + PN T ++++ ++
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+ + + M +G T +Y+ ++ C++ L + + + M G+ P + F L
Sbjct: 256 KGIELLQDME-RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 314
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
I C A KL A K F +M V + P ++TL G A F
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
L + KK+ A + +M++ +P+ + ++ L R+D AL FY + +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
+P T N V+ YC S ++D ++ +M++ G R D+ + LI +
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF----RATDVSYNTLIAGHCEKGLL 289
Query: 386 SV---FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
S + M + G +P V T++ ++ FC +L V+ +M+A + P + L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRK 502
I+ + A ++++ M+ GI+ ++ L L A F ++DK
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 503 TP 504
P
Sbjct: 410 VP 411
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 38/407 (9%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KGF + E+F +I K F L+ ++K+R L K
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 173 -EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ E+ + KP+V+ +N L++ LCK E A D+ +GL+P+ SY L
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG---------- 281
++ + + + +++ +M +PD+VTYGILI+ + D+AV
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 282 -------------------------FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
+ EM ++N++P ++++TLI+G DEA +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+ G + +NA++ +C S +D+A ++ M + + P+ TY I+ +
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K + A +FR M C+P V TY ++ FC + M + +M+ R ++P +
Sbjct: 567 KQQDMATAIKIFRYMEKNK-CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 437 HVFFVLISALC-HANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
+ LI +L ++ L+ A Y++ M+ P F+ L Q +
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 233/536 (43%), Gaps = 64/536 (11%)
Query: 20 LSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICK----ILSKSPN--ST 73
+SK + + PLS + S S R H +P TP K+ IL N
Sbjct: 1 MSKTLLSRIKPLSNP-------HASNSFRSH--LPITPRIKKLVSDTVSILKTQQNWSQI 51
Query: 74 IDAALADLSV---EVSPELVAEVLNKLSNAGVLALSFFHW--AEKQKGFKHSTESFHALI 128
+D AD V ++SP V +++ + + + F W +EK+ F + + + +
Sbjct: 52 LDDCFADEEVRFVDISPF----VFDRIQDVEI-GVKLFDWLSSEKKDEFFSNGFACSSFL 106
Query: 129 EALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGL 186
+ L + R F I +++ +++ + LT + + +AVE ++ + E Y
Sbjct: 107 KLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS 166
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG-------------------------- 220
P+V N L+ +L KS+ + A++++D+M RG
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 221 ---------LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
+P++ Y ++ G+ + ++ V +E+K + F P + T+G +IN +C
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K + + E++E+ + S + +I+ + E AN P+
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
TYN ++ C + + A +DE + G+ PN+ +Y ++ K++ A + +M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANK 451
+E GC+P + TY I++ +D + + ++ RG+ P ++ +L+S LC +
Sbjct: 407 -AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 452 LDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG-METTAIHFALKIDKLRKTPLV 506
A F +MLD I P A +++TL I +G + F+L ++K K +V
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 132/355 (37%), Gaps = 49/355 (13%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + G KP++ + L+ L S ++ A + K+ RG+ PD Y +L+ G +
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILIN------------------------------- 268
L + EM PD Y LI+
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 269 ----AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
+C++ DEA+ + M E++++P +ST+I+G + + A++ + + N
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
P TY +++ +C A EM+ + PN TY ++ L K +T E
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFC--------------DEERLDMEMAVWDQMRAR 430
+ + C P T++ +L+ F + + + + +M++
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSD 704
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
G + + LC + AC + +M+ G P F+ + G
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 50/251 (19%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F + G+K +V N ++ C+S +++A ++M LVPD +Y+ ++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ +QQ++ ++ R M+ +P+VVTY LIN +C + A + EMQ ++++
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Query: 293 PSPHIFSTLINGLGSDKR-LDEAL------------------------------------ 315
P+ ++TLI L + L++A+
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE 682
Query: 316 -------------EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
EF+ + K++G++ YN+ + C + A D+M + G
Sbjct: 683 PDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFS 742
Query: 363 PNSRTYDIILH 373
P+ ++ ILH
Sbjct: 743 PDPVSFAAILH 753
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ F MEK KP V + L++ C + A+E F +M+ R LVP++ +YT L+
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 234 GWSQQQNLLRVNEVCRE--MKCECFEPDVVTYGILINAYCK---AKKYDEAVG------- 281
+++ + L E M +C P+ VT+ L+ + K K E G
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCV-PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 282 ----FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
F+H M+ +++ + L + A F +K GF+P+ ++ A++
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 338 GAYC 341
+C
Sbjct: 753 HGFC 756
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 200/467 (42%), Gaps = 23/467 (4%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSN 99
P ++S S+ IH L C++ + + + + S ++ L +
Sbjct: 264 PNSVSYSILIHGL----------CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 100 AGVLALSFFHWAEK-QKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTR 155
G++ +F + E +G K + ++ LI+ L GKI + + + +K R +
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR--KMVKDRIFPSV 371
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T +V A E MEK KP V FN+L++ LC+ KA L +
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
M GL PD+ SY +L++G ++ ++ ++ M C EPD +T+ +INA+CK K
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
D A F M K + +TLI+G+ + +AL E + N
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM 395
++ ++ + ++ ++ + G+ P+ TY ++ LI++ ++ + M
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS- 610
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
GC P V Y II+ C R++ + M+ G+ P + V++ + KLD A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQAL------IDAGMETTAIHFALK 496
+ + M++ G ++S+L Q ID E+T AL+
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR 717
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 43/367 (11%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A T+ +ME G + D+ +V+ LCK+ E A+ K+ G V D T LL
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 234 GWSQQQNL---LRVNEV-CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
G+ + NL L+V +V +E+ C P+ V+Y ILI+ C+ + +EA G +M EK
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTC---APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 290 NMMPSP-----------------------------------HIFSTLINGLGSDKRLDEA 314
PS H ++ LI+GL D +++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
K + P TYNA++ YC R+ A+ ++ M++ PN RT++ ++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
L + +A + +RM G P + +Y++++ C E ++ + M I P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFA 494
F +I+A C K D A + ML GI +TL + G A+
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 495 LKIDKLR 501
+ K+R
Sbjct: 535 ETLVKMR 541
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 255 CFEPDVVTYGILINAYCKAK------KYDEAVGF-----YHEMQEKNMMPSPHIFSTLIN 303
CF+ +G +N C + K D +GF Y M+ + + T++N
Sbjct: 146 CFDELREVFGFRLNYPCYSSLLMSLAKLD--LGFLAYVTYRRMEADGFVVGMIDYRTIVN 203
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-KQCGVG 362
L + + A F K GF ++ +++ +C + + DA +V D M K+
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
PNS +Y I++H L + +EA+ + +M E GC+P+ TY ++++ CD +D
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMG-EKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
++D+M RG P +H + VLI LC K++ A ++M+ I P ++ L
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 483 DAGMETTAIHFALKIDK 499
G A ++K
Sbjct: 383 KDGRVVPAFELLTVMEK 399
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%)
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
Y + +A+GF Y +V A C + + A + ++ + G +S +L +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
++A VF MS E+ C P +Y I++ C+ RL+ + DQM +G P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
+ VLI ALC +D A F +M+ G +P + ++ L L G A K+
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 498 DKLRKTPLV 506
K R P V
Sbjct: 363 VKDRIFPSV 371
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 158/335 (47%), Gaps = 27/335 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK----LLTRDTXX 159
AL FF W E GF H+ + + L K FK +W+ + + +R+ ++T +
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
VKEA+ TF +M++Y KP+V +N +++ LC+ + +KA+ L D+M+
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 220 GLV--PDLKSYTILLEGWSQ-----------QQNLLRVNEVCREMKCECFEPDVVTYGIL 266
G PD +YTIL+ + + ++ + N + REM F PDVVTY L
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
I+ CK + A+ + +M+ K +P+ +++ I ++ A+E K G
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 327 A-PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL----IKARTT 381
P + TY ++ A + R +A +V EM + G+ P TY ++ L + +
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLD 409
Query: 382 QEAYSVFR-----RMSSEMGCEPTVSTYDIILRLF 411
+E + R R S M +PT++ +++ + F
Sbjct: 410 EELHKRMREGIQQRYSRVMKIKPTMARKEVVRKYF 444
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 181/395 (45%), Gaps = 13/395 (3%)
Query: 76 AALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIR 135
A+L D S +++ + ++ +L + LA F W EK+ +S +I LG +
Sbjct: 112 ASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGC--DDQKSCDLMIWVLGNHQ 169
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+F + W L+ DM TR +A+ TF+ M+K+ P F
Sbjct: 170 KFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQG 229
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQ-QQNLLRVNEVCREMKC 253
L+ LC+ +EKA+E + + L P D++ + ++L GW ++ + REM
Sbjct: 230 LLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGN 287
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
C P+ +Y +I+ + K +++ Y EM+++ + P ++++L+ L + DE
Sbjct: 288 YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDE 347
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A++ +K G P++ TYN+++ C + ++D A V+ M + P T+ H
Sbjct: 348 AMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF----H 403
Query: 374 HLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
++A ++ V +M S++G PT T+ +IL ++ + + +W +M I
Sbjct: 404 AFLEAVNFEKTLEVLGQMKISDLG--PTEETFLLILGKLFKGKQPENALKIWAEMDRFEI 461
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ ++ I L L+ A + + +M G
Sbjct: 462 VANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 5/219 (2%)
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
++++ Y A +A+ + M + P F L+ L +++A EF K
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK-K 252
Query: 325 GFAPETPTYNAVVGAYC--WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
F + +N ++ +C W+ + +A R+ EM + PN +Y ++ K
Sbjct: 253 LFPVDVEGFNVILNGWCNIWT-DVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
++ ++ M G P + Y+ ++ + E+ D M + ++ G+ P + +
Sbjct: 312 DSLRLYDEMKKR-GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
I LC A KLD A M+ + P + F +A+
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 194/430 (45%), Gaps = 23/430 (5%)
Query: 55 HTPHADKICKIL-SKSPNSTIDAALADLSVEVSPELVAEVLN---KLSNAGVLALSFFHW 110
H D IC+++ +++ + + ++ DL E LV VL+ KL +A L FF W
Sbjct: 84 HEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHA----LQFFRW 139
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXX 169
E+ +H ++ +I+ LG++ + ++ DM ++ + D
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAG 199
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V+E+V+ F+KM+ G++ + +N L V+ + A+ F+KM G+ P +Y
Sbjct: 200 IVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYN 259
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L G+ L +MK PD T+ +IN +C+ KK DEA + EM+
Sbjct: 260 LMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS ++T+I G + R+D+ L +E+ +++G P TY+ ++ C + +M +A
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLI---KARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
++ M + P + I L L+ KA A V + M++ + Y +
Sbjct: 380 KNILKNMMAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMAT-LNVPAEAGHYGV 436
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMH--------VFFVLISALCHANKLDAACKY 458
++ C + + + D + + I+ + +I LC+ + A
Sbjct: 437 LIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVL 496
Query: 459 FQQMLDVGIR 468
F+Q++ G++
Sbjct: 497 FRQLMKRGVQ 506
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 137/283 (48%), Gaps = 4/283 (1%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCRE 250
D + + +VL +K +E A + F GL+ D ++ +++ + L + +
Sbjct: 116 DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 175
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
M + D + +LI +Y KA E+V + +M++ + + +++L + R
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
A ++ K + G P TYN ++ + S+R++ A R ++MK G+ P+ T++
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 371 ILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRA 429
+++ + + EA +F M +++G P+V +Y +++ + +R+D + ++++MR+
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIG--PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
Query: 430 RGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
GI P + L+ LC A K+ A + M+ I P N
Sbjct: 354 SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN 396
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 149/363 (41%), Gaps = 50/363 (13%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++ A+ FE M+ G+ P+ + FN +++ C+ K +++A++LF +M+ + P + SYT
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYT 329
Query: 230 ILLEGW---SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+++G+ + + LR+ E EM+ EP+ TY L+ C A K EA M
Sbjct: 330 TMIKGYLAVDRVDDGLRIFE---EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 287 QEKNMMPSPH-IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
K++ P + IF L+ + A E + E Y ++ C +
Sbjct: 387 MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASA 446
Query: 346 MDDAYRVVDEM--------KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR-------- 389
+ A +++D + Q + Y+ I+ +L T +A +FR
Sbjct: 447 YNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 390 -------------------------RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
++ S G + Y+++++ + +
Sbjct: 507 DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTAL 566
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD--VGIRPPANLFSTLKQALI 482
D M G +P +F +I +L ++ A + M+D VGI +L + + +AL+
Sbjct: 567 DSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALL 626
Query: 483 DAG 485
G
Sbjct: 627 MRG 629
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
W+++ L+R D T+ +I + K + A +M EK +
Sbjct: 139 WTERSGLIR--------------HDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWD 184
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+F LI G + E+++ ++K K G +YN++ R A R +
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN 244
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
+M GV P TY+++L + + A F M + G P +T++ ++ FC
Sbjct: 245 KMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTR-GISPDDATFNTMINGFCRF 303
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
+++D ++ +M+ I P + + +I +++D + F++M GI P A +
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 475 STLKQALIDAG 485
STL L DAG
Sbjct: 364 STLLPGLCDAG 374
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 170/364 (46%), Gaps = 2/364 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
KG K +++ +I A K R F + +++ MK+ ++ + T K+ +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F++M + G++ +V + L+ C+ ++++A LFD++ +GL P +Y L++
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + EM+ + V + LI+ YC+ DEA Y M++K
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+T+ + KR DEA ++ + G T +Y ++ YC +++A R+
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
EM GV PN+ TY+++++ K +EA + M + G +P TY ++ C
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN-GMDPDSYTYTSLIHGECI 551
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ +D M ++ +M +G+ + V+IS L A K D A + +M G +
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 474 FSTL 477
++ L
Sbjct: 612 YTAL 615
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M+K G+ + L+++ K+ + A++LFD+MR RG+ D+ YT L+ ++ N
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ R + E+ + P TYG LI+ CK + A +EMQ K + + +F+T
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI+G +DEA Y+ + GF + T N + + R D+A + + M + G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
V ++ +Y ++ K +EA +F MSS+ G +P TY++++ +C + ++
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+ M A G+ P + + LI C A+ +D A + F +M G+ + ++ +
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 481 LIDAG 485
L AG
Sbjct: 584 LSKAG 588
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 142/316 (44%), Gaps = 1/316 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +E F +M G+K V +V+ LC+ VEK+++L + +G+ P+ +Y
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + +Q++ V V + MK + + VTY +L+ K K +A + EM+E+
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ H++++LI+ + A +++ G +P + TY A++ C M A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+++EM+ GV ++ ++ + EA ++ M + G + V T + I
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK-GFQADVFTCNTIAS 442
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
F +R D +M G+ + LI C ++ A + F +M G++P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 470 PANLFSTLKQALIDAG 485
A ++ + A G
Sbjct: 503 NAITYNVMIYAYCKQG 518
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 101 GVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTX 158
G + +F + E +KG S+ ++ ALI+ + K+ + L+ +M+ + + +T+
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
V EA ++ ME+ G + +V N + + K ++A++ +M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
G+ SYT L++ + ++ N+ + EM + +P+ +TY ++I AYCK K E
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A M+ M P + +++LI+G +DEA+ + + G + TY ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ + D+A+ + DEMK+ G +++ Y ++ +
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 69 SPNSTIDAALADLSVEVSPELVAEVL-NKLSNAGVLALSFFHWAEKQKGFKHSTESFHAL 127
SP+S AL D +V AE+L N++ + KG + F+ L
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEM---------------QSKGVNITQVVFNTL 405
Query: 128 IEAL---GKIRQFKVIWNLVEDMK-QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK 183
I+ G + + +I++++E Q + T +T + EA + +M +
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK---RYDEAKQWLFRMME 462
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
G+K + L+DV CK +VE+A+ LF +M +G+ P+ +Y +++ + +Q +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
++ M+ +PD TY LI+ C A DEA+ + EM K + + ++ +I+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
GL + DEA Y++ K G+ + Y A++G+
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 139/306 (45%), Gaps = 1/306 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+E + F+ M K GL + + K + ++ E+F +M G+ + S TI+
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+EG ++ + + ++ +E + +P+ TY +INAY K + + G M++ +
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + ++ L+ + ++ +A + +++ + G + Y +++ C M A+
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ DE+ + G+ P+S TY ++ + K A + M S+ G T ++ ++ +
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK-GVNITQVVFNTLIDGY 409
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C + +D ++D M +G + + S + D A ++ +M++ G++
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 472 NLFSTL 477
++ L
Sbjct: 470 VSYTNL 475
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 60 DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVL-ALSFFHWAEKQKGFK 118
D +CK+ + + V ++ + +++ G++ S + +QKGF+
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 119 HSTESFHALIEALGKIRQFKVI--WNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ + + +++++ W L M+ L+ + V+EA
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQW-LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
F +M G++P +N ++ CK +++A++L M G+ PD +YT L+ G
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
N+ + EM + + + VTY ++I+ KA K DEA G Y EM+ K
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 297 IFSTLINGLGS 307
+++ LI + S
Sbjct: 611 VYTALIGSMHS 621
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 129/308 (41%), Gaps = 17/308 (5%)
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E+ +FD M +GL D +S + L +++ + E+ R M + V + I+
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
+ C+ + +++ E K + P + ++T+IN + + K +G
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
TY ++ + +M DA ++ DEM++ G+ + Y ++ + + A+
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
+F + +E G P+ TY ++ C + + ++M+++G+ VF LI
Sbjct: 351 LFDEL-TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 447 CHANKLDAACKYFQQMLDVGIRPP-------ANLFSTLKQ---------ALIDAGMETTA 490
C +D A + M G + A+ F+ LK+ +++ G++ +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 491 IHFALKID 498
+ + ID
Sbjct: 470 VSYTNLID 477
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 192/415 (46%), Gaps = 13/415 (3%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXX 159
ALS F WA+KQ + S E + L + L + R F I +L E+M Q L+ +
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
K++ A F+K ++ G K + +N L+ + KA E+++ M
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
+ D +Y +++ ++ L ++ ++MK P + L+++ KA + D +
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ Y EMQ PS +F +LI+ +LD AL +++ K +GF P Y ++ +
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
+ S +++ A V +M++ G P TY +L + A ++ M++ G P
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA-GLRP 486
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+S+Y +L L ++ +D+ + +M+A G + VL+ + A+ +D A K+
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDAS-VDLALKWL 545
Query: 460 QQMLDVGIRPP----ANLF-STLKQALIDAG--METTAIHFALKIDKLRKTPLVA 507
+ M GI+ LF S +K L D+ + T +H A K+D + T ++A
Sbjct: 546 RFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILA 600
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 168/388 (43%), Gaps = 8/388 (2%)
Query: 104 ALSFFHW---AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-QRKLLTRDTXX 159
A+ F W + K + + LG+ Q+ V L++ + Q LL
Sbjct: 155 AVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYT 214
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK-SKSVEKAQELFDKMRH 218
K ++A++ FE+M++ G P + +N ++DV K +S K + D+MR
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+GL D + + +L +++ L E E+K +EP VTY L+ + KA Y E
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ EM+E + ++ L+ EA E G P TY V+
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
AY + + D+A ++ MK+ G PN+ TY+ +L L K + E + M S GC
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN-GCS 453
Query: 399 PTVSTYDIILRLFCDEERLDMEMA-VWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
P +T++ +L L C + +D + V+ +M++ G P F LISA A K
Sbjct: 454 PNRATWNTMLAL-CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 458 YFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ +M G ++ L AL G
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 140/304 (46%), Gaps = 4/304 (1%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR-VNEV 247
+V + ++ ++ EKA +LF++M+ G P L +Y ++L+ + + R + V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
EM+ + + D T +++A + EA F+ E++ P ++ L+ G
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
EAL ++ + N ++ TYN +V AY + +A V++ M + GV PN+ T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y ++ KA EA +F M E GC P TY+ +L L + R + + + M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 428 RARGILPGMHVFFVLISALCHANKLDA-ACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
++ G P + ++ ALC +D + F++M G P + F+TL A G
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 487 ETTA 490
E A
Sbjct: 507 EVDA 510
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 166/395 (42%), Gaps = 3/395 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL F ++ K+ G +T +++A++ LGK + + ++ DMK R T
Sbjct: 405 ALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K F +M+ G +P+ FN L+ + S A +++ +M G
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ +Y LL +++ + V +MK + F+P +Y +++ Y K Y
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++E + PS + TL+ + L + + FK +G+ P+ +N+++ +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ D A +++ +++ G+ P+ TY+ ++ ++ +A + + + +P +
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ-LKPDLV 702
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+Y+ +++ FC + + + +M RGI P + + +S + M
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 463 LDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
RP F + AG + A+ F KI
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 1/246 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KGFK + S+ +++ K + I + +K+ ++ +
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 173 EAVE-TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
E F +K+G KP++ FN ++ + ++ ++A+ + + +R GL PDL +Y L
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ + E+ + ++ +PD+V+Y +I +C+ EAV EM E+ +
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++T ++G + E + E N P T+ VV YC + + +A
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 352 VVDEMK 357
V ++K
Sbjct: 793 FVSKIK 798
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 118/298 (39%), Gaps = 1/298 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
+ GF +++AL+ AL + ++ N++ DMK + +T
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 174 AVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+E E K G + P L+ K +++ ++ F + G PD+ + +L
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+++ + + ++ + PD+VTY L++ Y + + +A +++ +
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++T+I G + EA+ + G P TYN V Y + V
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ M + PN T+ +++ +A EA ++ + C S + LR+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRV 816
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 187/401 (46%), Gaps = 39/401 (9%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
++ G K +++ L++AL K + ++ EDMK+R RD T K
Sbjct: 230 RRGGHKLDIFAYNMLLDALAKDEKACQVF---EDMKKRHC-RRDEYTYTIMIRTMGRIGK 285
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
EAV F +M GL V +N L+ VL K K V+KA ++F +M G P+ +Y++
Sbjct: 286 CDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 231 LLEGWSQQQNLLRVNEVCREMK----------------------------CECFEPDVV- 261
LL + L+R++ V K C+ + V
Sbjct: 346 LLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 262 ---TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
+Y ++ + C A K EA+ ++ EK ++ +++T+ + LG K++ + +
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
EK K +G +P+ TYN ++ ++ +D+A + +E+++ P+ +Y+ +++ L K
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
EA+ F+ M E G P V TY ++ F ER++M +++++M +G P +
Sbjct: 526 GDVDEAHVRFKEM-QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 439 FFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
+ +L+ L + A + +M G+ P + ++ L++
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA F M + +K E + +++ LC + +A E+ K+ +G+V D Y
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + + + ++++ +MK + PD+ TY ILI ++ + + DEA+ + E++ +
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P +++LIN LG + +DEA +++ + G P+ TY+ ++ + + R++ AY
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ +EM G PN TY+I+L L K T EA ++ +M + G P TY ++ RL
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ-GLTPDSITYTVLERL 626
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 21/312 (6%)
Query: 193 FNKLVDVLCKSK---SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC- 248
+N+++ +L +S ++ + + D M + ++ + IL+ + ++L ++C
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDL----QMCL 191
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
R +K + + TY L+ AY +++ Y +A Y E++ ++ L++ L D
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD 251
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
++ A + +E K + TY ++ + D+A + +EM G+ N Y
Sbjct: 252 EK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEE---RLDMEMAVWD 425
+ ++ L K + +A VF RM E GC P TY ++L L E RLD + +
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRM-VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ +GI + L+ L + A + F M ++ + + ++ ++L AG
Sbjct: 368 RYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 486 METTAIHFALKI 497
AI KI
Sbjct: 422 KTIEAIEMLSKI 433
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 183/402 (45%), Gaps = 45/402 (11%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ VP+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++ K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG-ILPGMHVF 439
+ + +M E G +PTV+TY ++ +C LD + ++ M + P ++
Sbjct: 597 FESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+LI+A A ++M +RP ++ L + L
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 8/294 (2%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+ +G+ P + + LCK+ A ++ + + + LL +
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-----NMMPS 294
++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K N++ +
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 295 PHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
I F+TLI+GL RL EA E + K P TYN ++ YC + +++ A V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
V MK+ + PN T + I+ + + A F M E G + V TY ++ C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACC 487
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ M +++M G P +++ LIS LC + A + +++ + G
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 14/328 (4%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG------LVPDLKSYTILLE 233
KM++ ++P+V L++ LCKS+ V++A E+F++MR + + D + L++
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 234 GWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G + L E+ MK E C P+ VTY LI+ YC+A K + A M+E +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +T++ G+ L+ A+ F+ + G TY ++ A C ++ A
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++M + G P+++ Y ++ L + R +A V ++ E G + Y++++ LF
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLF 556
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
CD+ + + M G P + LIS ++ + +QM + G+ P
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 472 NLFSTLKQALIDAGMETTAIHFALKIDK 499
+ A+IDA + ALK+ K
Sbjct: 617 TTYG----AVIDAYCSVGELDEALKLFK 640
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV F MEK G+K V + L+ C +VEKA ++KM G PD K Y L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G Q + V ++K F D++ Y +LI +C ++ +M+++ P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI+ G K + E+ + +G P TY AV+ AYC +D+A ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 354 DEMK-QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+M V PN+ Y+I+++ K +A S+ M +M P V TY+ + +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRPNVETYNALFKCLN 698
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
++ + + + + D+M + P +L+ L +++L K+ Q
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ EK+++ G ++ +N L+ + C + EK E+ M G PD +Y L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNM 291
+ + ++ V + +M+ + +P V TYG +I+AYC + DEA+ + +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I++ LIN +AL E+ K P TYNA+ + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 352 VVDEMKQCGVGPNSRTYDIILHH------LIKARTTQEAYSV 387
++DEM + PN T +I++ L+K R + YSV
Sbjct: 709 LMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 750
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 178/417 (42%), Gaps = 32/417 (7%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQF-------- 137
P + +++ +L + LA+SFF + + K + K ES AL + +F
Sbjct: 78 PLVFSQITRRLGSYS-LAISFFEYLDAKSQSLKRREESLSL---ALQSVIEFAGSEPDPR 133
Query: 138 KVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+ L E K++ + LT V ++V +E+++ +V N +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVV 191
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLV--PDLKSYTILL-EGWSQQQNLL---RVNEVCRE 250
VDVL ++ V+ A ++ D+M + V P+ + I+L E W ++ LL ++ +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER--LLTEEKIIALISR 249
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQEKNMMPSPHIFSTLINGLGSDK 309
P+ V I++ CK + + A + M+ K + +P F+ L++ LG +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP-FNALLSCLGRNM 308
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ------CGVGP 363
+ + K P+ T ++ C S R+D+A V ++M+ +
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+S ++ ++ L K +EA + RM E C P TY+ ++ +C +L+ V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+M+ I P + ++ +C + L+ A +F M G++ + TL A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 182/402 (45%), Gaps = 45/402 (11%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FEKM
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ P+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++ K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG-ILPGMHVF 439
+ + +M E G +PTV+TY ++ +C LD + ++ M + P ++
Sbjct: 597 FESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+LI+A A ++M +RP ++ L + L
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +G+ P + + LCK+ A ++ + + + LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK----- 289
+ ++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 290 NMMPSPHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMD 347
N++ + I F+TLI+GL RL EA E + K AP TYN ++ YC + +++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A VV MK+ + PN T + I+ + + A F M E G + V TY +
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTL 482
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+ C ++ M +++M G P +++ LIS LC + A + +++ + G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 14/328 (4%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG------LVPDLKSYTILLE 233
KM++ ++P+V L++ LCKS+ V++A E+F+KMR + + D + L++
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLID 378
Query: 234 GWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G + L E+ MK E C P+ VTY LI+ YC+A K + A M+E +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERC-APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +T++ G+ L+ A+ F+ + G TY ++ A C ++ A
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++M + G P+++ Y ++ L + R +A V ++ E G + Y++++ LF
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLF 556
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
CD+ + + M G P + LIS ++ + +QM + G+ P
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 472 NLFSTLKQALIDAGMETTAIHFALKIDK 499
+ A+IDA + ALK+ K
Sbjct: 617 TTYG----AVIDAYCSVGELDEALKLFK 640
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV F MEK G+K V + L+ C +VEKA ++KM G PD K Y L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G Q + V ++K F D++ Y +LI +C ++ +M+++ P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI+ G K + E+ + +G P TY AV+ AYC +D+A ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 354 DEMK-QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+M V PN+ Y+I+++ K +A S+ M +M P V TY+ + +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM-VRPNVETYNALFKCLN 698
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
++ + + + + D+M + P +L+ L +++L K+ Q
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ EK+++ G ++ +N L+ + C + EK E+ M G PD +Y L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNM 291
+ + ++ V + +M+ + +P V TYG +I+AYC + DEA+ + +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I++ LIN +AL E+ K P TYNA+ + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 352 VVDEMKQCGVGPNSRTYDIILHH------LIKARTTQEAYSV 387
++DEM + PN T +I++ L+K R + YSV
Sbjct: 709 LMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 750
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 177/417 (42%), Gaps = 32/417 (7%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQF-------- 137
P + +++ +L + LA+SFF + + K + K ES AL + +F
Sbjct: 78 PLVFSQITRRLGSYS-LAISFFEYLDAKSQSLKRREESLSL---ALQSVIEFAGSEPDPR 133
Query: 138 KVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+ L E K++ + LT V ++V +E+++ +V N +
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVV 191
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLV--PDLKSYTILL-EGWSQQQNLL---RVNEVCRE 250
VDVL ++ V+ A ++ D+M + V P+ + I+L E W + LL ++ +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGR--LLTEEKIIALISR 249
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQEKNMMPSPHIFSTLINGLGSDK 309
P+ V I++ CK + + A + M+ K + +P F+ L++ LG +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP-FNALLSCLGRNM 308
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ------CGVGP 363
+ + K P+ T ++ C S R+D+A V ++M+ +
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+S ++ ++ L K +EA + RM E C P TY+ ++ +C +L+ V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+M+ I P + ++ +C + L+ A +F M G++ + TL A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 183/402 (45%), Gaps = 45/402 (11%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ VP+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++ K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG-ILPGMHVF 439
+ + +M E G +PTV+TY ++ +C LD + ++ M + P ++
Sbjct: 597 FESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+LI+A A ++M +RP ++ L + L
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +G+ P + + LCK+ A ++ + + + LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK----- 289
+ ++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 290 NMMPSPHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMD 347
N++ + I F+TLI+GL RL EA E + K P TYN ++ YC + +++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A VV MK+ + PN T + I+ + + A F M E G + V TY +
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTL 482
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+ C ++ M +++M G P +++ LIS LC + A + +++ + G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 14/328 (4%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG------LVPDLKSYTILLE 233
KM++ ++P+V L++ LCKS+ V++A E+F++MR + + D + L++
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 234 GWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G + L E+ MK E C P+ VTY LI+ YC+A K + A M+E +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +T++ G+ L+ A+ F+ + G TY ++ A C ++ A
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++M + G P+++ Y ++ L + R +A V ++ E G + Y++++ LF
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLF 556
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
CD+ + + M G P + LIS ++ + +QM + G+ P
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 472 NLFSTLKQALIDAGMETTAIHFALKIDK 499
+ A+IDA + ALK+ K
Sbjct: 617 TTYG----AVIDAYCSVGELDEALKLFK 640
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 178/417 (42%), Gaps = 32/417 (7%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQF-------- 137
P + +++ +L + LA+SFF + + K + K ES AL + +F
Sbjct: 78 PLVFSQITRRLGSYS-LAISFFEYLDAKSQSLKRREESLSL---ALQSVIEFAGSEPDPR 133
Query: 138 KVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+ L E K++ + LT V ++V +E+++ +V N +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVV 191
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLV--PDLKSYTILL-EGWSQQQNLL---RVNEVCRE 250
VDVL ++ V+ A ++ D+M + V P+ + I+L E W ++ LL ++ +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKER--LLTEEKIIALISR 249
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQEKNMMPSPHIFSTLINGLGSDK 309
P+ V I++ CK + + A + M+ K + +P F+ L++ LG +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP-FNALLSCLGRNM 308
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ------CGVGP 363
+ + K P+ T ++ C S R+D+A V ++M+ +
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+S ++ ++ L K +EA + RM E C P TY+ ++ +C +L+ V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+M+ I P + ++ +C + L+ A +F M G++ + TL A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 40/362 (11%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+++A+ E+M ++ + P+ +N ++ + K + +EL M+ GLVP+ +Y
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ G+ + +L ++ MK PD+ TY ILIN C A E + M+
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 289 KNMMPSPHIFSTLING---LG---SDKRLDEALEFYEKFKAN------------------ 324
+ P ++TLI+G LG ++L E +E + KAN
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME-NDGVKANQVTHNISLKWLCKEEKRE 397
Query: 325 -------------GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
GF+P+ TY+ ++ AY + A ++ EM Q G+ N+ T + I
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
L L K R EA+++ + + G TY ++ F EE+++ + +WD+M+
Sbjct: 458 LDALCKERKLDEAHNLLNS-AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
I P + F LI LCH K + A + F ++ + G+ P + F+++ G A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 492 HF 493
F
Sbjct: 577 EF 578
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 175/374 (46%), Gaps = 5/374 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+++ +++A+ K + + L+ DMK+ L+ R T +KEA + E M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
++ + P++ +N L++ LC + S+ + EL D M+ L PD+ +Y L++G +
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI--FS 299
L ++ +M+ + + + VT+ I + CK +K + E+ + + SP I +
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF-SPDIVTYH 420
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
TLI L ALE + G T T N ++ A C ++D+A+ +++ +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
G + TY ++ + ++A ++ M ++ PTVST++ ++ C + ++
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK-KVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
M +D++ G+LP F +I C +++ A +++ + + +P + L
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 480 ALIDAGMETTAIHF 493
L GM A++F
Sbjct: 600 GLCKEGMTEKALNF 613
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 154/358 (43%), Gaps = 3/358 (0%)
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE 211
LLT +T + A E F+ M K G+ V FN LV+ C +E A
Sbjct: 166 LLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 212 LFDKMRHRGLV-PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+ ++M V PD +Y +L+ S++ L + E+ +MK P+ VTY L+ Y
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
CK EA M++ N++P ++ LINGL + + E LE + K+ P+
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 331 PTYNAVVGAYCWSMRMD-DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
TYN ++ C+ + + +A +++++M+ GV N T++I L L K + +
Sbjct: 346 VTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
+ G P + TY +++ + L + + +M +GI ++ ALC
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 450 NKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
KLD A G + TL A+ ++ K++ TP V+
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 177/386 (45%), Gaps = 6/386 (1%)
Query: 84 EVSPELVA--EVLNKLSNAGVLA-LSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
+V+P+ V +L +S G L+ L K+ G + +++ L+ K+ K
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 141 WNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ +VE MKQ +L T ++E +E + M+ L+P+V +N L+D
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEP 258
+ +A++L ++M + G+ + ++ I L+ +++ V +E+ F P
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+VTY LI AY K A+ EM +K + + +T+++ L +++LDEA
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
GF + TY ++ + +++ A + DEMK+ + P T++ ++ L
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
T+ A F + +E G P ST++ I+ +C E R++ +++ P +
Sbjct: 535 GKTELAMEKFDEL-AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 439 FFVLISALCHANKLDAACKYFQQMLD 464
+L++ LC + A +F +++
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIE 619
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KVKE V+ +G P++ ++ L+ K + A E+ +M +G+ + +
Sbjct: 402 KVKELVDM------HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ +++ L + + F D VTYG LI + + +K ++A+ + EM++
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ F++LI GL + + A+E +++ +G P+ T+N+++ YC R++ A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ +E + P++ T +I+L+ L K T++A + F + E E TY+ ++
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMIS 633
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKL 452
FC +++L + +M +G+ P + IS L KL
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 37/284 (13%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
QKG K +T + + +++AL K R+ NL+ +R + + T KV+
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+E +++M+K + P VS FN L+ LC E A E FD++ GL+P
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP--------- 554
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
D T+ +I YCK + ++A FY+E + +
Sbjct: 555 --------------------------DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P + + L+NGL + ++AL F+ +T TYN ++ A+C ++ +AY +
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ EM++ G+ P+ TY+ + L++ E + ++ S + G
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL---GSDKRLDEA 314
P + I ++AY K A+ + +M + P+ +TL+ GL S + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-KQCGVGPNSRTYDIILH 373
E ++ G + T+N +V YC +++DA +++ M + V P++ TY+ IL
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
+ K + + M G P TY+ ++ +C L + + M+ +L
Sbjct: 249 AMSKKGRLSDLKELLLDMKKN-GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
P + + +LI+ LC+A + + M + ++P ++TL + G+ A
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 125/238 (52%), Gaps = 1/238 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ E ++M GL V +N ++D LCK++ +E A +M+ RG+ P+L ++
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L G+S + ++ +V+ V ++ F+PDV+T+ ++IN C+AK+ +A + EM E
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW 524
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++ LI S D +++ + K K NG +P+ YNA + ++C ++ A
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
++ M + G+ P++ TY ++ L ++ EA +F + GC P T ++
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH-GCVPDSYTKRLV 641
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 4/347 (1%)
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
H + L + F+V LV M++ L R KE + K+ +
Sbjct: 293 HGIFRCLPPCKAFEV---LVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P+ S FN + L K + + +FD RG+ P Y +L++ Q
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ ++M + V +Y +I+ CKA++ + A F EMQ++ + P+ F+T ++G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + EK +GF P+ T++ ++ C + + DA+ EM + G+ PN
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
TY+I++ T + +F +M E G P + Y+ ++ FC ++ +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKM-KENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
M G+ P + LI AL + + A + F + G P +
Sbjct: 589 KTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 188/446 (42%), Gaps = 72/446 (16%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEA 174
G K ST ++A+I+AL K + + + M+ R T V EA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD---------- 224
+ ++ME+ G +P V + L+D + V++A + + MR R L P+
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 225 -------LKSYTILLEGWSQQQNLLRV-----------NEVCREM--------------- 251
K++ +L+ + NL RV N + +E
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 252 -------------------KCECFE--------PDVVTYGILINAYCKAKKYDEAVGFYH 284
C F+ P Y +L+ A A+++ E +
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+M ++ S + ++ +I+ L +R++ A F + + G +P T+N + Y
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+ + V++++ G P+ T+ +I++ L +A+ ++A+ F+ M E G EP TY
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML-EWGIEPNEITY 533
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
+I++R C D + ++ +M+ G+ P ++ + I + C K+ A + + ML
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLR 593
Query: 465 VGIRPPANLFSTLKQALIDAGMETTA 490
+G++P +STL +AL ++G E+ A
Sbjct: 594 IGLKPDNFTYSTLIKALSESGRESEA 619
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ F ++ G+KP +N ++D L KS S++ A F +MR G PD +Y IL+ G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + + ++M+ E P+V TY ILI+ + A + DEA+ M+ + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR--MDDAYRVV 353
T ++G+ +A E F + Y+AV+ YC S + + +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETGQFL 343
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
++ + G P+S T++ + L+K E +F S G +P + Y ++++ +
Sbjct: 344 RKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR-GVKPGFNGYLVLVQALLN 402
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+R QM G+L ++ + +I LC A +++ A + +M D GI P
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 474 FSTL 477
F+T
Sbjct: 463 FNTF 466
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ EL ++R G + +L+ W + N+V ++ +P Y +I+
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
A K+ D A + +M+ P ++ LI+G+ +DEA+ ++ + G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
TY ++ + + R+D+A + ++ M+ + PN T +H + + +A+ V
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 389 RRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
+ V YD +L + ++ RG +P F +S L
Sbjct: 309 VGFMEKDSNLQRVG-YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLK 367
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+ L C+ F + G++P N + L QAL++A
Sbjct: 368 GHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA 403
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 221/559 (39%), Gaps = 116/559 (20%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
+ ++ IL+K I+ AL L +S ++ V+ N L FF WA +++
Sbjct: 34 SGEVISILAK--KKPIEPALEPLVPFLSKNIITSVIKDEVNRQ-LGFRFFIWASRRE-RL 89
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE-AVET 177
S ESF +I+ L + + W +E++K + + E AVE+
Sbjct: 90 RSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVES 149
Query: 178 FEKMEKYGLKPEVSDFNK------------------------------------LVDVLC 201
F +M+++ +P+V +N L+D L
Sbjct: 150 FGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLY 209
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
K AQ++FD M RG+ P+ +YTIL+ G Q+ + ++ EM+ PD V
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Query: 262 TYGILINAYCK-----------------------------------AKKYDEAVGFYHEM 286
+ L++ +CK A++Y +A Y M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+KN+ P +++ LI GL ++++AL+ + G +P+T YNAV+ A C +
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
++ + EM + P++ T+ I++ + + +EA +F + GC P+V+T++
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS-GCSPSVATFNA 448
Query: 407 ILRLFC-----DEERL---DMEMA---------------VWDQMRARGIL---------- 433
++ C E RL ME+ +D M G +
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHF 508
Query: 434 ------PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
P + + VLI+ C A +D A K + G+ P + ++TL L G E
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 488 TTAIHFALKIDKLRKTPLV 506
A D R +P V
Sbjct: 569 EEAFKLFYAKDDFRHSPAV 587
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 159/334 (47%), Gaps = 4/334 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+T E+++ G+ + F L+ K EKA E F +M+ PD+ +Y ++L
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 236 SQQQNLLRVN-EVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+++ + V EM KC C P++ T+GIL++ K + +A + +M + + P
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNC-SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ LI+GL D+A + + + + +G P++ +NA++ +C RM +A+ ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
++ G R Y ++ L +AR +A+ ++ M + +P + Y I+++
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILIQGLSK 350
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+++ + + M ++GI P + + +I ALC L+ +M + P A
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
+ L ++ G+ A +I+K +P VA
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 147/338 (43%), Gaps = 48/338 (14%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM---RHRGLVPDL-- 225
V+EA E F ++EK G P V+ FN L+D LCKS +++A+ L KM R L L
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 226 ---KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+S+ ++E S +L+ PD+V+Y +LIN +C+A D A+
Sbjct: 484 SGNRSFDTMVESGS----ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ +Q K + P ++TLINGL R +EA + + + + F Y +++ C
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCR 597
Query: 343 SMRMDDAYRV---------------VDEMKQC-GVGPNSRTYDIILHHLIKARTTQEAYS 386
++ A+ + +E++QC G R L LI+ T ++
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERA----LRRLIELDTRKD--- 650
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
E T+ Y I L C R + V+ +R + IL LI L
Sbjct: 651 -----------ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGL 699
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
C +LDAA + F LD + + + L +L+++
Sbjct: 700 CKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLES 737
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 14/357 (3%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
+P+L+ + LN AG AL F W + F H+ E+ ++ G+ + FK + ++
Sbjct: 108 NPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS 167
Query: 146 DMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSK 204
K + + T + K+ + FEKME YGLK + +V LC+
Sbjct: 168 --KYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG 225
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
A+++ + + PD +L+ GW + L + EM FE Y
Sbjct: 226 HASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 265 ILINAYCK-AKKYD------EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
++++ CK +K D E EM+ + + + F+ LIN L +R +EA+
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP--NSRTYDIILHHL 375
+ + G P+ TY ++ + + R+ + ++D+MK G G N + Y L L
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKIL 404
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ A SVF+ M + GC+P + TYD+++ C +L ++ + +GI
Sbjct: 405 CGIERLEHAMSVFKSMKAN-GCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+ME G+ FN L++ LCK + E+A LF +M G PD ++Y +L+ Q
Sbjct: 312 EMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAA 371
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ +E+ +MK YG L+N K+Y + F
Sbjct: 372 RIGEGDEMIDKMKS-------AGYGELLN----KKEY-------------------YGFL 401
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
++ G+ +RL+ A+ ++ KANG P TY+ ++G C + ++ A + E +
Sbjct: 402 KILCGI---ERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 458
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRR 390
G+ + + Y + +K +T + +V +R
Sbjct: 459 GIAVSPKEYRVD-PRFMKKKTKEVDSNVKKR 488
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 173/399 (43%), Gaps = 40/399 (10%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDT 157
SN G+L+L F + +G+ SF++++ + K+ Q
Sbjct: 34 SNCGILSLKFLAYL-VSRGYTPHRSSFNSVVSFVCKLGQ--------------------- 71
Query: 158 XXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR 217
VK A + M ++G +P+V +N L+D C++ + A + + +R
Sbjct: 72 -------------VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 218 -HRGLV--PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
G + PD+ S+ L G+S+ + L V V + +C P+VVTY I+ +CK+
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ A+ +H M+ + P+ F+ LI+G L+ A+ Y++ + + TY
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
A++ +C M A + M + V PNS Y I+ + + A +M ++
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
G ++ Y +I+ C +L + + M ++P M +F +++A + ++ A
Sbjct: 298 -GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 455 ACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
A + ++++ G P ST+ + G AI +
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 7/317 (2%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P S FN +V +CK V+ A+++ M G PD+ SY L++G + ++
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 245 NEVCREMKCE----CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ V ++ C +PD+V++ L N + K K DE V Y + K P+ +ST
Sbjct: 111 SLVLESLRASHGFIC-KPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYST 168
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
I+ L AL+ + K + +P T+ ++ YC + ++ A + EM++
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ N TY ++ K Q A ++ RM + EP Y I+ F D
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR-VEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
M +M +G+ + + V+IS LC KL A + + M + P +F+T+ A
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 481 LIDAGMETTAIHFALKI 497
+G A++ K+
Sbjct: 348 YFKSGRMKAAVNMYHKL 364
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 138/307 (44%), Gaps = 6/307 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV +++M + + V + L+D CK +++A+E++ +M + P+ YT +++
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q+ + + +M + D+ YG++I+ C K EA +M++ +++P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
IF+T++N R+ A+ Y K GF P+ + ++ + ++ +A
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI--- 393
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ C N Y +++ L K E +F ++S E G P Y + C
Sbjct: 394 --VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKIS-EAGLVPDKFMYTSWIAGLCK 450
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ L + +M G+L + + LI L + A + F +ML+ GI P + +
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAV 510
Query: 474 FSTLKQA 480
F L +A
Sbjct: 511 FDLLIRA 517
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 161/366 (43%), Gaps = 8/366 (2%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXX 161
LAL FH + K+ + +F LI+ K +V +L ++M++ ++ L T
Sbjct: 181 LALKSFH-SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+++ A E + +M + ++P + ++D + + A + KM ++G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
D+ +Y +++ G L E+ +M+ PD+V + ++NAY K+ + AV
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
YH++ E+ P ST+I+G+ + +L EA+ ++ KAN Y ++ A C
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALC 414
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
+ R+ ++ + G+ P+ Y + L K +A+ + RM E G +
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE-GLLLDL 473
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
Y ++ + + V+D+M GI P VF +LI A + AA
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Query: 462 MLDVGI 467
M G+
Sbjct: 534 MQRRGL 539
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
EA+ F +++ + +P P + I+ L + +L+F + G+ P ++N+VV
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG- 396
C ++ A +V M + G P+ +Y+ ++ + + A V + + G
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 397 -CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
C+P + +++ + F + LD E+ V+ + + P + + I C + +L A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLD-EVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLR 501
K F M + P F+ L AG A+ ++ ++R
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E F K+ + GL P+ + + LCK ++ A +L +M GL+ DL +YT L+
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + ++ +V EM PD + +LI AY K A +MQ + ++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Query: 293 PS 294
+
Sbjct: 541 TA 542
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 173/428 (40%), Gaps = 42/428 (9%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ +L L + V+ E V VL S + +L FF+WA + ++ + L ++L
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASH 124
Query: 135 RQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEK-YGLKPEVSD 192
++++ +W +++ MK L ++ +T V +AVE F + K G + V
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N L+ LC K A L +M +GL PD ++Y IL+ GW
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW----------------- 227
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
C A K EA F EM + P LI GL + L+
Sbjct: 228 ------------------CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A E K GF P+ T+N ++ A S ++ + + G+ + TY ++
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ K EA+ + E G +P S Y I++ C D + + M+ +
Sbjct: 330 PAVSKIGKIDEAFRLLNN-CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH 388
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIH 492
P V+ +LI+ K A Y +M ++G+ P + F + L + G
Sbjct: 389 PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKH----D 444
Query: 493 FALKIDKL 500
A++I++L
Sbjct: 445 LAMRIEQL 452
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A+ KME+ +K V +N ++D LCK AQ LF +M +G+ PD+ +Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + ++ R+M PDVVT+ LINA K K EA Y +M + +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++++I+G RL++A + + +P+ T++ ++ YC + R+D+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ EM + G+ N+ TY ++H + A + M S G P T+ +L
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS-GVAPNYITFQSMLASL 296
Query: 412 CDEERLDMEMAVWDQMR 428
C ++ L A+ + ++
Sbjct: 297 CSKKELRKAFAILEDLQ 313
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 5/286 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A+ ++M + G +P + +++ LCK E A L KM + + Y
Sbjct: 25 RVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYN 80
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + + + + EM + PDV+TY +I+++C++ ++ +A +M E+
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER 140
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P FS LIN L + ++ EA E Y G P T TYN+++ +C R++DA
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R++D M P+ T+ +++ KA+ +F M G TY ++
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-GIVANTVTYTTLIH 259
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
FC LD + + M + G+ P F ++++LC +L A
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 5/301 (1%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M + G +P+V F L++ LC V +A L D+M G P Y ++ G + +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ +M+ + VV Y +I+ CK + A + EM +K + P +S
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+ R +A + P+ T++A++ A ++ +A + +M + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ P + TY+ ++ K +A + M+S+ C P V T+ ++ +C +R+D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
M ++ +M RGI+ + LI C LDAA M+ G+ P F ++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 481 L 481
L
Sbjct: 296 L 296
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
M G PD+ ++T L+ G + +L+ + M E +P YG +IN CK
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
+ A+ +M+E ++ I++ +I+ L D A + + G P+ TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM 395
++ ++C S R DA +++ +M + + P+ T+ +++ L+K EA ++ M
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR- 175
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
G PT TY+ ++ FC ++RL+ + D M ++ P + F LI+ C A ++D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ F +M GI ++TL G
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 4/285 (1%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
AL D VE + ++N L G AL+ E+ K ++A+I+ L K
Sbjct: 31 ALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKD 89
Query: 135 RQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
NL +M + + T + +A + M + + P+V F
Sbjct: 90 GHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
+ L++ L K V +A+E++ M RG+ P +Y +++G+ +Q L + M
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ PDVVT+ LIN YCKAK+ D + + EM + ++ + ++TLI+G LD
Sbjct: 210 KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 269
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
A + ++G AP T+ +++ + C + A+ +++++++
Sbjct: 270 AQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 14/322 (4%)
Query: 174 AVETFEKMEKYGLKPEVSD----FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
AVE F + E P V D +N ++ V +S KAQEL D MR RG VPDL S+
Sbjct: 210 AVEIFTRAE-----PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFN 264
Query: 230 ILLEGWSQQQNL---LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L+ + L L V E+ ++ PD +TY L++A + D AV + +M
Sbjct: 265 TLINARLKSGGLTPNLAV-ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM 323
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ P ++ +I+ G EA + + + GF P+ TYN+++ A+
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT 383
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
+ V +M++ G G + TY+ I+H K A +++ M G P TY +
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ R A+ +M GI P + + LI A K + A F ML G
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 467 IRPPANLFSTLKQALIDAGMET 488
+P +S + L+ G ET
Sbjct: 504 TKPDNLAYSVMLDVLL-RGNET 524
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 4/316 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK--AQELFDKMRHRGLVPDLKS 227
K +A E + M + G P++ FN L++ KS + A EL D +R+ GL PD +
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAIT 299
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y LL S+ NL +V +M+ +PD+ TY +I+ Y + EA + E++
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
K P +++L+ ++ ++ E Y++ + GF + TYN ++ Y ++D
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 348 DAYRVVDEMKQ-CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
A ++ +MK G P++ TY +++ L KA T EA ++ M ++G +PT+ TY
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML-DVGIKPTLQTYSA 478
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ + + + + M G P + V++ L N+ A ++ M+ G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 467 IRPPANLFSTLKQALI 482
P L+ + L+
Sbjct: 539 HTPSYTLYELMILGLM 554
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 178/417 (42%), Gaps = 22/417 (5%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFK----VIWN 142
PE +V+N+ G FH+A + + +IEA GK + ++ V+ N
Sbjct: 732 PETAHQVVNQAETKG------FHFA--------CSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
L + + L T ++ + + F M + G P V N L+ LC
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARA---IFNTMMRDGPSPTVESINILLHALCV 834
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+E+ + ++++ G S ++L+ +++ N+ V ++ MK + P +
Sbjct: 835 DGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRL 894
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y ++I CK K+ +A EM+E N I+++++ + + + ++ Y++ K
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
G P+ TYN ++ YC R ++ Y ++ +M+ G+ P TY ++ K + +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+A +F + S+ G + S Y ++++ D + M+ GI P + +L
Sbjct: 1015 QAEQLFEELLSK-GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
+ + + A K + D + +S++ A + + + I L++ K
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 155/381 (40%), Gaps = 36/381 (9%)
Query: 24 YPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV 83
Y A + S S Q L ++R +P D I S N+ I+A L S
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVP-----DLI------SFNTLINARLK--SG 274
Query: 84 EVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L E+L+ + N+G+ + +++ L+ A + +
Sbjct: 275 GLTPNLAVELLDMVRNSGL---------------RPDAITYNTLLSACSRDSNLDGAVKV 319
Query: 144 VEDMK----QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
EDM+ Q L T + EA F ++E G P+ +N L+
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGL---AAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEP 258
+ ++ EK +E++ +M+ G D +Y ++ + +Q L ++ ++MK P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D +TY +LI++ KA + EA EM + + P+ +S LI G + +EA + +
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+G P+ Y+ ++ A+ + +M G P+ Y++++ L+K
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKE 556
Query: 379 RTTQEAYSVFRRMSSEMGCEP 399
+ + R M G P
Sbjct: 557 NRSDDIQKTIRDMEELCGMNP 577
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 128/293 (43%), Gaps = 2/293 (0%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAG-VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
L D+ ++S + +L+ + AG + + + + K G+ + + +IE L K ++
Sbjct: 848 LQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKR 907
Query: 137 FKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+ +V +M++ + K+ V+ ++++++ GL+P+ + +N
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNT 967
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+ + C+ + E+ L +MR+ GL P L +Y L+ + +Q+ L + ++ E+ +
Sbjct: 968 LIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ D Y ++ + +A M+ + P+ L+ S EA
Sbjct: 1028 LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAE 1087
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+ K T Y++V+ AY S + + EMK+ G+ P+ R +
Sbjct: 1088 KVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 24/321 (7%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXX 161
LAL + + G ++ LI++LGK + L+ +M + T T
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
K +EA +TF M + G KP+ ++ ++DVL + KA L+ M G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC---KAKKYDE 278
P Y +++ G ++ + + R+M+ C + +L+ C A++
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ +E++ ++ +++ S R EA E E K + + A++
Sbjct: 600 AITNGYELENDTLL-------SILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV 652
Query: 339 AYCWSMRMDDAYRVVDE--MKQCGVG---PNSRTYDIILHHLIKARTTQEAYSVFR--RM 391
+C ++++ +DE C G +S Y+ +LH + EA VF R+
Sbjct: 653 LHC---KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRL 709
Query: 392 SSEMGCEPTVSTYDIILRLFC 412
S GCE + S ++ ++C
Sbjct: 710 S---GCEASESVCKSMVVVYC 727
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKV 171
K+ G + +++ LI + R+ + + L++ M+ L + DT +
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A + FE++ GLK + S ++ ++ + S S KA++L M++ G+ P L + +L
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +S N +V +K E + Y +I+AY ++K Y+ + EM+++ +
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
P I++ + K E + + + GF
Sbjct: 1134 EPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 78/172 (45%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+E ++M GL P++ + L+ K K +E+A++LF+++ +GL D Y +
Sbjct: 979 EEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTM 1038
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + ++ + MK EP + T +L+ +Y + EA +++ +
Sbjct: 1039 MKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
+ +S++I+ K + +E + K G P+ + V A +S
Sbjct: 1099 ELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 151/320 (47%), Gaps = 6/320 (1%)
Query: 171 VKEAVETFEKMEKY--GLKPEVSDFNKLVDVLCKS--KSVEKAQELFDKMRHRGLVPDLK 226
V + V+ F+ + K +P S F L+ C++ S+ + + M + GL PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ I + + + ++ +E+ + PD TY L+ CK K F EM
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 287 QEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
++ ++ P F+ LI+ + + K L EA+ K GF P+ YN ++ +C +
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+A V +MK+ GV P+ TY+ ++ L KA +EA + M + G EP +TY
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV-DAGYEPDTATYT 339
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
++ C + +++ ++M ARG P + L+ LC A +D + ++ M
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 466 GIRPPANLFSTLKQALIDAG 485
G++ +N ++TL ++L+ +G
Sbjct: 400 GVKLESNGYATLVRSLVKSG 419
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M GL+P+ + V LC++ V++A++L ++ + PD +Y LL+ + ++
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 241 LLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
L V E EM+ + +PD+V++ ILI+ C +K EA+ ++ P +++
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
T++ G + + EA+ Y+K K G P+ TYN ++ + R+++A + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
G P++ TY +++ + + + A S+ M + GC P TY+ +L C +D
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR-GCAPNDCTYNTLLHGLCKARLMDK 388
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
M +++ M++ G+ + + L+ +L + K+ A + F +D A+ +STL+
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLET 448
Query: 480 AL 481
L
Sbjct: 449 TL 450
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E + + +KP++ F L+D +C SK++ +A L K+ + G PD Y +++G+
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
V ++MK E EPD +TY LI KA + +EA + M + P +
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++L+NG+ AL E+ +A G AP TYN ++ C + MD + + MK
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
GV S Y ++ L+K+ EAY VF
Sbjct: 399 SGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Query: 118 KHS---TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVK 172
KHS T +++ L++ L K + V++ V++M+ + D + ++
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ K+ G KP+ +N ++ C +A ++ KM+ G+ PD +Y L+
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G S+ + + M +EPD TY L+N C+ + A+ EM+ +
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TL++GL + +D+ +E YE K++G E+ Y +V + S ++ +AY V
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Query: 353 VD 354
D
Sbjct: 428 FD 429
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 202 KSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCRE----MKCE-C 255
KS ++ A+ LF+ + +P DLK + +L+ + ++ VN+ + +K +
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYG---SIAVVNDTVKLFQHILKSQPN 117
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F P T+ IL++ C+A D ++ H + + ++N
Sbjct: 118 FRPGRSTFLILLSHACRAP--DSSISNVH-----------RVLNLMVN------------ 152
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
NG P+ T + V + C + R+D+A ++ E+ + P++ TY+ +L HL
Sbjct: 153 --------NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K + Y M + +P + ++ I++ C+ + L M + ++ G P
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG-METTAIHFA 494
++ ++ C +K A +++M + G+ P ++TL L AG +E ++
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 495 LKID 498
+D
Sbjct: 325 TMVD 328
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 174/369 (47%), Gaps = 2/369 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLT-RDTXXXXXXXXXXXXKVK 172
++G + ++ +LI+ K + ++ E +K++KL+ + +++
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AV + M + G++ + N L++ CKS + +A+++F +M L PD +Y L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ + + ++C +M + P V+TY IL+ Y + + + + + M ++ +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
STL+ L +EA++ +E A G +T T N ++ C ++++A +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+D + P +TY + H K +EA++V M + G PT+ Y+ ++
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK-GIFPTIEMYNTLISGAF 587
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
L+ + ++RARG+ P + + LI+ C+ +D A +M++ GI N
Sbjct: 588 KYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVN 647
Query: 473 LFSTLKQAL 481
+ S + +L
Sbjct: 648 ICSKIANSL 656
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 168/390 (43%), Gaps = 8/390 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
++G S L+EAL K+ F L E++ R LLT T KV
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA E + + + KP V + L K ++++A + + M +G+ P ++ Y L+
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + ++L +V ++ E++ P V TYG LI +C D+A EM EK +
Sbjct: 584 SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV-----VGAYCWSMRMD 347
+ +I S + N L ++DEA +K F P Y ++ A
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKIV--DFDLLLPGYQSLKEFLEASATTCLKTQK 701
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A V + + + PN+ Y++ + L KA ++A +F + S P TY I+
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTIL 761
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ ++ + D+M +GI+P + + LI LC +D A + ++ GI
Sbjct: 762 IHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Query: 468 RPPANLFSTLKQALIDAGMETTAIHFALKI 497
P A ++TL L+ +G A+ K+
Sbjct: 822 TPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 181/427 (42%), Gaps = 19/427 (4%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
AL DLS++ S EL+ +L +L L F+ A KQ+ F+ +++ ++ L + R
Sbjct: 60 ALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARN 119
Query: 137 FK-----------------VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
++ V+W + + + + VK A+ F+
Sbjct: 120 YQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
M YG P + N L+ L + A ++D+M + PD+ + +I++ + +
Sbjct: 180 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 239
Query: 240 NLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
N+ + +E + E +VVTY LIN Y + M E+ + + +
Sbjct: 240 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 299
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++LI G ++EA +E K + Y ++ YC + ++ DA RV D M +
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
GV N+ + +++ K+ EA +F RM ++ +P TY+ ++ +C +D
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLK 478
+ + DQM + ++P + + +L+ ++ ML G+ STL
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 479 QALIDAG 485
+AL G
Sbjct: 479 EALFKLG 485
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 1/301 (0%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
GL+ V +N L++ VE + M RG+ ++ +YT L++G+ ++ +
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V +K + D YG+L++ YC+ + +AV + M E + + I ++LING
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+L EA + + + P+ TYN +V YC + +D+A ++ D+M Q V P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
TY+I+L + + S+++ M +S ++ LF + + M +W
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD-FNEAMKLW 494
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+ + ARG+L V+IS LC K++ A + + +P + L
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 485 G 485
G
Sbjct: 555 G 555
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 4/294 (1%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+ + ++ M K G+ + + L++ L K +A +L++ + RGL+ D + +++
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + + E+ + +P V TY L + Y K EA M+ K +
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++TLI+G + L++ + + +A G P TY A++ +C +D AY
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR--- 409
EM + G+ N I + L + EA + +++ P + L
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
C + + E +V + + ++P V+ V I+ LC A KL+ A K F +L
Sbjct: 694 TTCLKTQKIAE-SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF-DKMRHRGLVPDLKSY 228
K+ E+VE K L P +N + LCK+ +E A++LF D + +PD +Y
Sbjct: 701 KIAESVEN--STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
TIL+ G + ++ + + EM + P++VTY LI CK D A H++ +
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
K + P+ ++TLI+GL + EA+ EK G
Sbjct: 819 KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEA 279
LVP+ Y + + G + L ++ ++ + F PD TY ILI+ A ++A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
EM K ++P+ ++ LI GL +D A K G P TYN ++
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 340 YCWSMRMDDAYRVVDEMKQCGV 361
S + +A R+ ++M + G+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGL 856
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSK-SVEKAQELFDKMRHRGLVPDLKSYTILL 232
A + ++ M + GL P V+ N L+ LC++ +V+ ++F +M RG PD +Y L+
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + ++ EM + P VVTY LIN C +K DEA+ + EM+ K +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +S+L++GL D R +A+E +E A G P TY ++ C ++ +A +
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI------ 406
+D M G+ P++ Y ++ +EA + M G P T++I
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG-GITPNRLTWNIHVKTSN 378
Query: 407 -ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
++R C ++ MR+RGI + L+ LC + A + +++
Sbjct: 379 EVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 466 GIRPPANLFSTLKQALID 483
G P + L +D
Sbjct: 438 GCIPSKGTWKLLIGHTLD 455
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 136/280 (48%), Gaps = 7/280 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V ++ F +M K G P+ + L+ LC+ +++A++LF +M + P + +YT
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G +N+ EMK + EP+V TY L++ CK + +A+ + M +
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ ++TLI GL ++++ EA+E ++ G P+ Y V+ +C + +A
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 351 RVVDEMKQCGVGPNSRTYDIIL---HHLIK---ARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+DEM G+ PN T++I + + +++ A A++++ M S G V T
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSR-GISVEVETL 411
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
+ +++ C + + + D++ G +P + +LI
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 8/289 (2%)
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ---NLLRVNEV 247
S F +V L + + A++L +M+ V + G+ + + LRV
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHK 111
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG- 306
++ C+ P Y ++ + + + A FY M+E + P+ + LI L
Sbjct: 112 MKDFDCD---PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCR 168
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+D +D L+ + + G P++ TY ++ C R+D+A ++ EM + P
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 367 TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
TY +++ L ++ EA M S+ G EP V TY ++ C + R M +++
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 427 MRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFS 475
M ARG P M + LI+ LC K+ A + +M G++P A L+
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 9/246 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F +M + P V + L++ LC SK+V++A ++M+ +G+ P++ +Y+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + L+ E+ M P++VTY LI CK +K EAV M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY-------NAVVGAYCW 342
+ P ++ +I+G + + EA F ++ G P T+ N VV C
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ A+ + M+ G+ T + ++ L K Q+A + + ++ GC P+
Sbjct: 387 NYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD-GCIPSKG 444
Query: 403 TYDIIL 408
T+ +++
Sbjct: 445 TWKLLI 450
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 2/236 (0%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D ++G ++ A K+ A M+ +N + S I ++ G G R ++L +
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
K K P Y V+ +++ A++ M++ G+ P + ++++ L +
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 379 RTTQEA-YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
T +A +F M GC+P TY ++ C R+D ++ +M + P +
Sbjct: 170 DGTVDAGLKIFLEMPKR-GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ LI+ LC + +D A +Y ++M GI P +S+L L G A+
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 185/406 (45%), Gaps = 6/406 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
L F+ A +QKGF H+ ++ L++ L + ++F + ++ MK +++
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 164 XXXXXXKVKEAV-ETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-G 220
+ + V E F ++ +KP ++ + +++L S V +++L +H G
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE-PDVVTYGILINAYCKAKKYDEA 279
L P+ + IL++ + ++ V EMK P+ +TY L++ + EA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 280 VGFYHEMQEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
V + +M K + P P F+ +ING ++ A + + K NG P Y+A++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
+C ++ +A + DE+K+ G+ ++ Y +++ + T EA + M + C
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR-CR 370
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
TY++ILR E R + + + DQ + G+ + ++++ALC +L+ A K+
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 459 FQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
M + GI P ++ L L ++G + + ++ P
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 168/350 (48%), Gaps = 14/350 (4%)
Query: 78 LADLSVEVSPEL--VAEVLNKLSNAGVLALS--FFHWAEKQKGFKHSTESFHALIEALGK 133
L + V P L ++ LN L ++G + LS +A+ G + +T F+ L++ K
Sbjct: 149 LIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCK 208
Query: 134 IRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEV 190
+ +VE+MK+ + + T + KEAVE FE M K G+ P+
Sbjct: 209 NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDP 268
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
FN +++ C++ VE+A+++ D M+ G P++ +Y+ L+ G+ + + + E
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
+K + D V Y L+N +C+ + DEA+ EM+ ++ ++ GL S+ R
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR 388
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
+EAL+ +++ + G +Y ++ A C + ++ A + + M + G+ P+ T++
Sbjct: 389 SEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNE 448
Query: 371 ILHHLIKARTTQEAYSV---FRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
++ L ++ T+ V F R +G P ++ ++ C E +L
Sbjct: 449 LVVRLCESGYTEIGVRVLIGFLR----IGLIPGPKSWGAVVESICKERKL 494
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 140/294 (47%), Gaps = 6/294 (2%)
Query: 197 VDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
V ++ + + + ++F+K + +G + +Y++LL+ + + L V+ + +MK E
Sbjct: 60 VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTLINGL--GSDKRLD 312
+ L+ + ++ +D+ + ++ +Q + PS + ST +N L + L
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG-PNSRTYDII 371
L Y K G P T +N +V +C + ++ A+ VV+EMK+ G+ PNS TY +
Sbjct: 180 RKLLLYAKHNL-GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTL 238
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+ L ++EA +F M S+ G P T+++++ FC ++ + D M+ G
Sbjct: 239 MDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNG 298
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
P ++ + L++ C K+ A + F ++ G++ ++TL G
Sbjct: 299 CNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 127/284 (44%), Gaps = 3/284 (1%)
Query: 113 KQKGFKH-STESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXX 169
K+ G + ++ ++ L++ L + K L EDM ++ ++ D T
Sbjct: 223 KRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAG 282
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+ A + + M+K G P V +++ L++ CK +++A++ FD+++ GL D YT
Sbjct: 283 EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + + ++ EMK D +TY +++ + +EA+ + +
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + + ++N L + L++A++F G P T+N +V C S +
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
RV+ + G+ P +++ ++ + K R + + + S
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 187/444 (42%), Gaps = 24/444 (5%)
Query: 51 TLIPHT--PHADKICKILSKSPNSTIDAALADL-SVEVSPELVA-----EVLNKLSNAGV 102
+LIP T +CK+ IDA L+D+ ++ P++ A ++L + + G
Sbjct: 76 SLIPFTYSRFISGLCKV---KKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGF 132
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXX 159
+FF Q+G + S+ LI L GK+ IWN + R ++ D
Sbjct: 133 AVQTFFCMV--QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM----IRSGVSPDNKA 186
Query: 160 XXXXXXXX--XXKVKEAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
KV A E E+++ +K +N L+ CK+ +EKA+ L M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
G PDL +Y +LL + L R V EM + D +Y L+ +C+
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP 306
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
D+ F + E +STLI +A +E+ + G TY ++
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ A+ A +++D+M + G+ P+ Y IL HL K+ +AY VF M E
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM-IEHE 425
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
P +Y+ ++ C R+ + +++ M+ + P F +I L KL AA
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 457 KYFQQMLDVGIRPPANLFSTLKQA 480
K + QM+D G ++ TL +A
Sbjct: 486 KVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 169/386 (43%), Gaps = 5/386 (1%)
Query: 109 HWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXX 167
+W K GF ++ I L K+++F +I L+ DM+ +
Sbjct: 67 YWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
KV AV+TF M + G +P+V + L++ L ++ V A E+++ M G+ PD K+
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 228 YTILLEGWSQQQNL-LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L+ G + + L V E+K + V Y LI+ +CKA + ++A M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ P ++ L+N + L A + +G + +YN ++ +C
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP 306
Query: 347 DDAYR-VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
D Y +V EM+ G + +Y ++ +A T++AY +F M + G V TY
Sbjct: 307 DKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQK-GMVMNVVTYT 364
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
+++ F E + + DQM G+ P + ++ LC + +D A F M++
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 466 GIRPPANLFSTLKQALIDAGMETTAI 491
I P A +++L L +G T AI
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAI 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 2/235 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWN-LVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
+ G + S++ L++ ++ +N +V++M+ R + +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A FE+M + G+ V + L+ + + A++L D+M GL PD YT +L
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + N+ + V +M PD ++Y LI+ C++ + EA+ + +M+ K
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
P F +I GL K+L A + +++ GF + + ++ A C SM D
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC-SMSAD 516
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
L KS ++ A ++FD+MRH Y + ++ + +MK F
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 260 VVTYGILINAYCKAKKYD---------EAVGF--------------------------YH 284
TY I+ CK KK+D E +GF +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
M ++ P ++ LINGL ++ +A+E + +G +P+ A+V C +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 345 RMDDAYRVV-DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
++D AY +V +E+K V ++ Y+ ++ KA ++A ++ M S++GCEP + T
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM-SKIGCEPDLVT 257
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLD 453
Y+++L + D L V +M GI + + L+ C + D
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 154/349 (44%), Gaps = 11/349 (3%)
Query: 70 PNSTIDAALADLSVEVSPELVAEVL---------NKLSNAGVLALSFFHWAEKQKGFKHS 120
P +AL +L+V +S LV EVL + + LA FF W Q+ F+H+
Sbjct: 92 PGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHT 151
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
+H L++ + ++K + L+++M K T T ++ VE F
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
K + + +P +N ++ L K + ++++M G PD+ +Y I++ +
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
R+ + EM + F PD+ TY IL++ K A+ + M+E + P F+
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
TLI+GL +L+ F ++ G P+ Y ++ Y ++ A + EM +
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
G PN TY+ ++ A +EA ++ + M S GC P Y ++
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR-GCNPNFVVYSTLV 439
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 247 VCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+CR EM + + T+ +LI +A + V + + + N P H ++ +++
Sbjct: 171 MCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
L K+ YE+ +GF P+ TYN V+ A + D YR++DEM + G P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRM-------------------------------- 391
+ TY+I+LHHL A ++ M
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 392 --SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
+ ++GC P V Y +++ + L+ ++ +M +G LP + + +I C A
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 450 NKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
K AC ++M G P ++STL L +AG
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ M + G++P V F L+D L ++ +E + D+ G PD+ YT+++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ L + E+ +EM + P+V TY +I +C A K+ EA EM+ + P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 294 SPHIFSTLINGLGSDKRLDEALE 316
+ ++STL+N L + ++ EA E
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHE 453
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM---KQCGVGPNSRTYDIILHHLIKART 380
+G+ T+N ++ C A VV++ K P +Y+ ILH L+ +
Sbjct: 181 DGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ 237
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
+ V+ +M E G P V TY+I++ + D + D+M G P ++ +
Sbjct: 238 YKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKL 500
+L+ L NK AA M +VG+ P F+TL L AG +F + K+
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 501 RKTPLVA 507
TP V
Sbjct: 357 GCTPDVV 363
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 173 EAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA + F ++ K G P+V + ++ +EKA+E+F +M +G +P++ +Y +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ G+ + +EM+ P+ V Y L+N A K EA +M EK
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 198/486 (40%), Gaps = 88/486 (18%)
Query: 85 VSPELVAEVLNK-LSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
+SP LVA V++ L N LAL FF+WA +Q G+ H + S+H++ ++L RQF + L
Sbjct: 45 ISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDAL 104
Query: 144 VEDMKQRK-LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG--LKPEVSDFNKLVDVL 200
+ +K K LL K + A E+ G + P+V N+L+ L
Sbjct: 105 FKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAGL 162
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW----SQQQNLLR-VNEV-------- 247
+ AQ+LF KMRH+G+ + + + + GW S+ LLR V+EV
Sbjct: 163 TSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI-GWFCRSSETNQLLRLVDEVKKANLNIN 221
Query: 248 ---------------CREMKC----------ECFEPDVVTYGILINAYCKAKKYDEAVGF 282
REM +C +PD + Y ++ A+ E
Sbjct: 222 GSIIALLILHSLCKCSREMDAFYILEELRNIDC-KPDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++ + P + I L S KRL EA E E + F + +A++G+
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVS- 339
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRT----------------------------------- 367
++ D A + M G P RT
Sbjct: 340 AVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQS 399
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y +++ L KA +E+Y+ + M E G P VS Y+ ++ C E + +WD+M
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKE-GLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL-----I 482
G + + VLI L + + + + F +ML+ GI P ++ +L + L I
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 483 DAGMET 488
+A ME
Sbjct: 519 EAAMEV 524
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 166/389 (42%), Gaps = 15/389 (3%)
Query: 84 EVSPELVAEVLNKLSNAGVLALSFFHWAEK------QKGFKHSTESFHALIEALGKIRQF 137
E+ P++ +L L++ G + +A+K KG +T F I + +
Sbjct: 149 EIHPDVCNRLLAGLTSDGC-----YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSET 203
Query: 138 KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE--AVETFEKMEKYGLKPEVSDFNK 195
+ LV+++K+ L + +E A E++ KP+ +
Sbjct: 204 NQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRV 263
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
+ + + ++ + Q + K R G+ P Y + + L EV +
Sbjct: 264 IAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGK 323
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F D LI + A D AV F M +P+ S L L + D +
Sbjct: 324 FPMDNDILDALIGS-VSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI 382
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ YE + G+ E +Y+ ++ C + R+ ++Y + EMK+ G+ P+ Y+ ++
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
KA + A ++ M E GC+ ++TY++++R +E + + ++D+M RGI P
Sbjct: 443 CKAEMIRPAKKLWDEMFVE-GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLD 464
++ LI LC K++AA + F++ ++
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEVFRKCME 530
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 2/254 (0%)
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
+K K G+ P SD+ + L +K + +A+E+ + + G P L G
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS-GKFPMDNDILDALIGSV 338
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ E M P + T L C+ K D + Y + K
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+S +I+ L R+ E+ ++ K G AP+ YNA++ A C + + A ++ DEM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER 416
G N TY++++ L + +E+ +F +M E G EP + Y ++ C E +
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM-LERGIEPDETIYMSLIEGLCKETK 517
Query: 417 LDMEMAVWDQMRAR 430
++ M V+ + R
Sbjct: 518 IEAAMEVFRKCMER 531
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E+ ++M+K GL P+VS +N L++ CK++ + A++L+D+M G +L +Y
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQE 288
+L+ S++ + +M EPD Y LI CK K + A+ + + M+
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEA 314
+ + + S + L S+ EA
Sbjct: 532 DHKTVTRRVLSEFVLNLCSNGHSGEA 557
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 58/384 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+EA E ++M+ G+ P+V ++ L+D C V A +L D+M G+ PDL +Y
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G ++ + V E+ MK E +P+ VT ++I C A+K EA F+ +++K
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 290 N------------------------------MMPSPHI---FSTLINGLGSDKRLDEALE 316
+ S +I FS I G L++A +
Sbjct: 523 CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY-----LEKAHD 577
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+K A P ++GA+C + +A + D M + G+ P+ TY I++H
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME---------------- 420
+ Q+A S+F M + G +P V TY ++L + +LD E
Sbjct: 638 RLNELQKAESLFEDMK-QRGIKPDVVTYTVLLDRYL---KLDPEHHETCSVQGEVGKRKA 693
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
V + A GI + + VLI C N L+ A + F +M+D G+ P ++TL +
Sbjct: 694 SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Query: 481 LIDAGMETTAIHFALKIDKLRKTP 504
G A+ ++ K P
Sbjct: 754 YFRKGYIDMAVTLVTELSKKYNIP 777
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 29/333 (8%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ +KM GLK + ++ CK +A E F + R + D Y +
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ S+ + E+ +EMK PDV+ Y LI+ YC K +A+ EM M
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ L++GL + +E LE YE+ KA G P T + ++ C++ ++ +A
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 353 VDEMKQ-------------CGVGPNSRTYDIILHHLIKARTT---------------QEA 384
++Q C G + + Y + R + ++A
Sbjct: 516 FSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
+ V ++MS+ EP S ++ FC + ++D M RG++P + + ++I
Sbjct: 576 HDVLKKMSA-YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
C N+L A F+ M GI+P ++ L
Sbjct: 635 TYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 40/361 (11%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+K A +ME+ G +V ++D CK+ ++ +A DKM +GL + +
Sbjct: 298 KMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS 357
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L+ + + L E +E + D V Y + +A K + +EA EM+++
Sbjct: 358 LILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P ++TLI+G ++ +AL+ ++ NG +P+ TYN +V + ++
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM----------GCEP 399
+ + MK G PN+ T +I+ L AR +EA F + + CE
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Query: 400 TVS--TYDIILRL---------------FCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+S Y +RL C E L+ V +M A + PG + +
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRK 502
I A C N + A F M++ G+ P +LF+ T IH ++++L+K
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIP--DLFTY-----------TIMIHTYCRLNELQK 644
Query: 503 T 503
Sbjct: 645 A 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
+V C ++ A+ + +M G D+ + +++ + + NL +M +
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG 348
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ + V +++ YCK EA+ + E ++ N+ ++ + L R++EA
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
E ++ K G P+ Y ++ YC ++ DA ++DEM G+ P+ TY++++ L
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ +E ++ RM +E G +P T +I+ C
Sbjct: 469 ARNGHEEEVLEIYERMKAE-GPKPNAVTNSVIIEGLC 504
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 112/279 (40%), Gaps = 10/279 (3%)
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
LF +++ GL + +Y I+++ ++ NL + E V Y IN C
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLC 256
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTL---INGLGSDKRLDEALEFYEKFKANGFAP 328
+ ++AV E+ ++ + + + L + G ++ ++ A + + GF
Sbjct: 257 VTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGL 316
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
+ AV+ YC +M + +A +D+M G+ N +IL K EA F
Sbjct: 317 DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 389 RRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
+ +M Y++ R++ + +M+ RGI+P + + LI C
Sbjct: 377 KEF-RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
K+ A +M+ G+ P ++ L L G E
Sbjct: 436 QGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 48/172 (27%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA F+ M + GL P++ + ++ C+ ++KA+ LF+ M+ RG+ PD+ +YT+
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 231 LLE-------------------GWSQQQNLLR-----------------VNEVCR----E 250
LL+ G + +LR ++ C+ E
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLE 726
Query: 251 MKCECF--------EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
E F EPD+V Y LI++Y + D AV E+ +K +PS
Sbjct: 727 QAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
G+++ +C K A EM+E + +I+ + L EAL F +K
Sbjct: 287 GMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLG 346
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQE 383
G + ++ YC +A E + + + Y++ L K +E
Sbjct: 347 KGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEE 406
Query: 384 AYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
A+ + + M + G P V Y ++ +C + ++ + + D+M G+ P + + VL+
Sbjct: 407 AFELLQEM-KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 444 SALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
S L + + +++M G +P A S + + L
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 194/426 (45%), Gaps = 24/426 (5%)
Query: 51 TLIP-HTPHADKICKIL---SKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALS 106
T+ P + H ++C IL SP+S + + L+ +++ E +V N +
Sbjct: 37 TITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHR 96
Query: 107 FFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX 165
FF +++ F H++ + + ++ +G R + W L +++ +R L+ T
Sbjct: 97 FFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTL 156
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
++K+ V F M +G V N+ V+ LCK K VE+A+ +F K++ + PD
Sbjct: 157 ASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDE 215
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG-FYH 284
+Y +++G+ +L+ ++ M E F+ D+ ++ K ++DEA FY
Sbjct: 216 ITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYV 275
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+ ++ + +I+ L + R+D A + +++ + G + T+ +++
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
R+ +AY +V+ ++ P+ Y ++ L+K + EA VFR+M + GCEP + TY
Sbjct: 336 RVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKM-IQRGCEPIMHTY 390
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
++L+ + +G P ++ + + + A K KY ++ L
Sbjct: 391 LMLLQ------------GHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLK 438
Query: 465 VGIRPP 470
G+ P
Sbjct: 439 RGLEVP 444
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 5/385 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD---TXXX 160
ALS+F + K + T +F+ +I L K+ Q +L M++++ R T
Sbjct: 135 ALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+++ FE M GLKP + +N L+ A + ++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
++PD+ SYT LL + + + + EV M+ E +P+VVTY LI+AY EAV
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ +M++ + P+ TL+ K+ ++ G T YN+ +G+Y
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
+ ++ A + M++ V +S T+ I++ + EA S + M ++ T
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLT 432
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
Y +L + + ++ ++++QM+ G P + + ++ A + K AC+ F
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 461 QMLDVGIRPPANLFSTLKQALIDAG 485
+M GI P + S L +A G
Sbjct: 493 EMEANGIEPDSIACSALMRAFNKGG 517
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 180/429 (41%), Gaps = 48/429 (11%)
Query: 109 HWAEKQKGF---------KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTX 158
+W ++ +G K E++ ALI A G+ Q++ NL++DM + + +R T
Sbjct: 25 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 84
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYG--------------------------------- 185
+EA+E +KM G
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 186 --LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR--GLVPDLKSYTILLEGWSQQQNL 241
++P+ + FN ++ L K +A +LF+ MR + PD+ ++T ++ +S + +
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V M E +P++V+Y L+ AY A+ ++++ ++P ++ L
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+N G ++ +A E + + P TYNA++ AY + + +A + +M+Q G+
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
PN + +L +++ +V S G + Y+ + + + L+ +
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-GINLNTAAYNSAIGSYINAAELEKAI 383
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
A++ MR + + F +LIS C +K A Y ++M D+ I ++S++ A
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 482 IDAGMETTA 490
G T A
Sbjct: 444 SKQGQVTEA 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
EM+ +PD TY LINA+ +A ++ A+ +M + PS ++ LIN GS
Sbjct: 36 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 95
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
EALE +K NG P+ T+N V+ AY + A + MK V P++ T++
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMG-CEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
II++ L K + +A +F M + C P V T+ I+ L+ + ++ AV++ M
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMET 488
A G+ P + + L+ A A + GI P ++ L + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 489 TAIHFALKIDKLRKTPLV 506
A L + K R+ P V
Sbjct: 276 KAKEVFLMMRKERRKPNV 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 135/334 (40%), Gaps = 44/334 (13%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A F +M+K+ KP+ ++ L++ ++ A L D M + P +Y
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ N EVC++M PD+VT+ I+++AY ++Y +A
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA----------- 135
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
L ++E K P+T T+N ++ YC S ++ +
Sbjct: 136 ------------------------LSYFELMKGAKVRPDTTTFNIII--YCLS-KLGQSS 168
Query: 351 RVVD-----EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+ +D K+ P+ T+ I+H + +VF M +E G +P + +Y+
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYN 227
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
++ + ++V ++ GI+P + + L+++ + + A + F M
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 466 GIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
+P ++ L A G A+ ++++
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 130/299 (43%), Gaps = 3/299 (1%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXX 169
A + +G +T ++++ I + + + L + M+++K+ T
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA+ ++ME + ++ ++ K V +A+ +F++M+ G PD+ +YT
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L ++ + + E+ EM+ EPD + L+ A+ K + M+EK
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + +F + + + + A++ + + N ++ + S +++
Sbjct: 533 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 592
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY-DII 407
++ ++ GVG N +TY I+L HL+ ++ V MS G +P+ Y DII
Sbjct: 593 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA-GIQPSNQMYRDII 650
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 87/192 (45%), Gaps = 3/192 (1%)
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+KN I++ +I +D+A + + + P+ TY+A++ A+ + +
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A ++D+M + + P+ TY+ +++ + +EA V ++M+ G P + T++I+
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN-GVGPDLVTHNIV 122
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD--V 465
L + + ++ ++ M+ + P F ++I L + A F M +
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 466 GIRPPANLFSTL 477
RP F+++
Sbjct: 183 ECRPDVVTFTSI 194
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 5/385 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD---TXXX 160
ALS+F + K + T +F+ +I L K+ Q +L M++++ R T
Sbjct: 267 ALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+++ FE M GLKP + +N L+ A + ++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
++PD+ SYT LL + + + + EV M+ E +P+VVTY LI+AY EAV
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ +M++ + P+ TL+ K+ ++ G T YN+ +G+Y
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
+ ++ A + M++ V +S T+ I++ + EA S + M ++ T
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLT 564
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
Y +L + + ++ ++++QM+ G P + + ++ A + K AC+ F
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 461 QMLDVGIRPPANLFSTLKQALIDAG 485
+M GI P + S L +A G
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGG 649
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 180/429 (41%), Gaps = 48/429 (11%)
Query: 109 HWAEKQKGF---------KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTX 158
+W ++ +G K E++ ALI A G+ Q++ NL++DM + + +R T
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 216
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYG--------------------------------- 185
+EA+E +KM G
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 186 --LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG--LVPDLKSYTILLEGWSQQQNL 241
++P+ + FN ++ L K +A +LF+ MR + PD+ ++T ++ +S + +
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V M E +P++V+Y L+ AY A+ ++++ ++P ++ L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+N G ++ +A E + + P TYNA++ AY + + +A + +M+Q G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
PN + +L +++ +V S G + Y+ + + + L+ +
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-GINLNTAAYNSAIGSYINAAELEKAI 515
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
A++ MR + + F +LIS C +K A Y ++M D+ I ++S++ A
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 482 IDAGMETTA 490
G T A
Sbjct: 576 SKQGQVTEA 584
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
EM+ +PD TY LINA+ +A ++ A+ +M + PS ++ LIN GS
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
EALE +K NG P+ T+N V+ AY + A + MK V P++ T++
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 370 IILHHLIKARTTQEAYSVFRRMSSEMG-CEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
II++ L K + +A +F M + C P V T+ I+ L+ + ++ AV++ M
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMET 488
A G+ P + + L+ A A + GI P ++ L + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 489 TAIHFALKIDKLRKTPLV 506
A L + K R+ P V
Sbjct: 408 KAKEVFLMMRKERRKPNV 425
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 135/334 (40%), Gaps = 44/334 (13%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A F +M+K+ KP+ ++ L++ ++ A L D M + P +Y
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ N EVC++M PD+VT+ I+++AY ++Y +A
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA----------- 267
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
L ++E K P+T T+N ++ YC S ++ +
Sbjct: 268 ------------------------LSYFELMKGAKVRPDTTTFNIII--YCLS-KLGQSS 300
Query: 351 RVVD-----EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+ +D K+ P+ T+ I+H + +VF M +E G +P + +Y+
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYN 359
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
++ + ++V ++ GI+P + + L+++ + + A + F M
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 466 GIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
+P ++ L A G A+ ++++
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 130/299 (43%), Gaps = 3/299 (1%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXX 169
A + +G +T ++++ I + + + L + M+++K+ T
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA+ ++ME + ++ ++ K V +A+ +F++M+ G PD+ +YT
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L ++ + + E+ EM+ EPD + L+ A+ K + M+EK
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + +F + + + + A++ + + N ++ + S +++
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 724
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY-DII 407
++ ++ GVG N +TY I+L HL+ ++ V MS G +P+ Y DII
Sbjct: 725 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA-GIQPSNQMYRDII 782
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 154/358 (43%), Gaps = 36/358 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++K+A+ E M G+ P+ S + LV+ LCK +V A +L +KM G + +Y
Sbjct: 121 RLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYN 180
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G +L + + + + P+ TY L+ A K + DEAV E+ K
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++ L+ G + R D+A+ + + A GF +YN ++ C R ++A
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYDIIL 408
++ EM P+ TY+I+++ L T++A V + MS T ++Y+ ++
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI 360
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPG-----------------MHVFFVL--------- 442
C E ++D+ + D+M R P F+++
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKC 420
Query: 443 ---------ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
I++LC AA + +M G P A+ +S L + L GM T A+
Sbjct: 421 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAM 478
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 139/307 (45%), Gaps = 13/307 (4%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E + G KP V+ +L+ LCK+ ++KA + + M G++PD +YT L+ +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ N+ ++ +M+ + + VTY L+ C ++++ F + +K + P+
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+S L+ ++ DEA++ ++ G P +YN ++ +C R DDA + E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G N +Y+I+L L +EA S+ M P+V TY+I++ R
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG-DRAPSVVTYNILINSLAFHGRT 332
Query: 418 DMEMAVWDQMRARGILPGMHVFFV-------LISALCHANKLDAACKYFQQMLDVGIRPP 470
+ + V +M G H F V +I+ LC K+D K +M+ +P
Sbjct: 333 EQALQVLKEMS-----KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 471 ANLFSTL 477
++ +
Sbjct: 388 EGTYNAI 394
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 2/249 (0%)
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PDL S + + S + NL + +P+V L+ CKA + +A+
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
M ++P ++ L+N L + A++ EK + +G+ T TYNA+V C
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
++ + + V+ + Q G+ PN+ TY +L K R T EA + + + G EP +
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLV 247
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+Y+++L FC E R D MA++ ++ A+G + + +L+ LC + + A +M
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 463 LDVGIRPPA 471
D G R P+
Sbjct: 308 -DGGDRAPS 315
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 181/448 (40%), Gaps = 49/448 (10%)
Query: 54 PHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAE------VLNKLSNAGVLALSF 107
P+ H+ ++ L K+ + + A+ + + VS ++ + ++N+L G + +
Sbjct: 104 PNVAHSTQLLYDLCKA--NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 108 FHWAEKQK--GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXX 164
EK + G+ +T +++AL+ L + VE + Q+ L T
Sbjct: 162 -QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
EAV+ +++ G +P + +N L+ CK + A LF ++ +G +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ SY ILL N + EM P VVTY ILIN+ + ++A+
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 285 EMQEKN--MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA------- 335
EM + N + ++ +I L + ++D ++ ++ P TYNA
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEH 400
Query: 336 ----------------------------VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
V+ + C A++++ EM +CG P++ T
Sbjct: 401 NSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHT 460
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y ++ L A V M C+PTV ++ ++ C R D+ M V++ M
Sbjct: 461 YSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMM 520
Query: 428 RARGILPGMHVFFVLISALCHANKLDAA 455
+ +P + +L+ + H ++L+ A
Sbjct: 521 VEKKRMPNETTYAILVEGIAHEDELELA 548
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 7/236 (2%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKG---FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
++N L+ G + E KG F+ + S++ +I L K + ++ +++M
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 150 RKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK-LVDVLCKSKSVE 207
R+ + T KV+EA + + K DF K ++ LC+ +
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQ-KCCTHDFYKSVITSLCRKGNTF 440
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTYGIL 266
A +L +M G PD +Y+ L+ G + EV M+ E +P V + +
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAM 500
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
I CK ++ D A+ + M EK MP+ ++ L+ G+ + L+ A E ++ +
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 113/282 (40%), Gaps = 39/282 (13%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXXXXXXXXXXXKVKE 173
KGFK + S++ L+ L +++ +L+ +M + + T + ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 174 AVETFEKMEK--YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ ++M K + + + +N ++ LCK V+ + D+M +R P+ +Y +
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 232 ----------------LEGWSQQQNLLR-------VNEVCR------------EMKCECF 256
++ S +Q + +CR EM F
Sbjct: 395 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTLINGLGSDKRLDEAL 315
+PD TY LI C + A+ M+E +N P+ F+ +I GL +R D A+
Sbjct: 455 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAM 514
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
E +E P TY +V ++ A V+DE++
Sbjct: 515 EVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M + +K +V +VD LCK + AQ LF +M +G+ P++ +Y +++ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+++ R M + PD+VT+ LINA+ K +K EA Y EM ++ P+ +++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G R+D+A + + G +P+ T++ ++ YC + R+D+ + EM + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ N+ TY ++H + A + M S G P T+ +L C ++ L
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS-CGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 421 MAVWDQMR 428
A+ + ++
Sbjct: 240 FAILEDLQ 247
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F +M + G+ P V +N ++D C S A +L M + + PD+ +++ L+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +++ + E+ +EM P +TY +I+ +CK + D+A M K P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
FSTLING KR+D +E + + G T TY ++ +C +D A ++
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+EM CGV P+ T+ +L L + ++A+++ +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ DVV +++ CK + A + EM EK + P+ ++ +I+ R +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ P+ T++A++ A+ ++ +A + EM + + P + TY+ ++
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K +A + M+S+ GC P V T+ ++ +C +R+D M ++ +M RGI+
Sbjct: 126 CKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ LI C LDAA +M+ G+ P F + L
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 97/186 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A + M + + P++ F+ L++ K + V +A+E++ +M + P +Y ++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ +Q + + M + PDVVT+ LIN YCKAK+ D + + EM + ++
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++TLI+G LD A + + + G AP+ T++ ++ C + A+ +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 353 VDEMKQ 358
++++++
Sbjct: 243 LEDLQK 248
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + ++ I + +++ L D A + + G P TYN ++ ++C S R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
DA +++ M + + P+ T+ +++ +K R EA +++ M PT TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML-RWSIFPTTITYN 119
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
++ FC ++R+D + D M ++G P + F LI+ C A ++D + F +M
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 466 GIRPPANLFSTLKQALIDAG 485
GI ++TL G
Sbjct: 180 GIVANTVTYTTLIHGFCQVG 199
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA E +++M ++ + P +N ++D CK V+ A+ + D M +G PD+ +++
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + + E+ EM + VTY LI+ +C+ D A +EM
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ P F ++ GL S K L +A E +
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 106 SFFH---WAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLL- 153
SF H W++ + +H E +F ALI A K R+ + ++M + +
Sbjct: 54 SFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 154 TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
T T +V +A + M G P+V F+ L++ CK+K V+ E+F
Sbjct: 114 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+M RG+V + +YT L+ G+ Q +L ++ EM PD +T+ ++ C
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Query: 274 KKYDEAVGFYHEMQE 288
K+ +A ++Q+
Sbjct: 234 KELRKAFAILEDLQK 248
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 4/303 (1%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV- 244
+ P + FN LV CK K VE+A E+ KM G+ PD +Y + + Q+ +R
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 245 NEVCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+EV +M E +P+ T GI++ YC+ + + + F M+E + + +F++LIN
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
G D E K + TY+ V+ A+ + M+ A +V EM + GV P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
++ Y I+ ++A+ ++A + + E P V + ++ +C +D M V
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVE--SRPNVVIFTTVISGWCSNGSMDDAMRV 421
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+++M G+ P + F L+ + A + Q M G++P + F L +A
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRV 481
Query: 484 AGM 486
AG+
Sbjct: 482 AGL 484
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 5/309 (1%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V KL++VL + +AQ +F + G P L SYT LL + Q+ ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
E++ + D + + +INA+ ++ ++AV +M+E + P+ ++TLI G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 310 RLDEALEFYEKFKANG---FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+ + + E + G P T+N +V A+C ++++A+ VV +M++CGV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 367 TYDIILH-HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
TY+ I ++ K T + V +M + +P T I++ +C E R+ +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+M+ + + VF LI+ D + M + ++ +ST+ A AG
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 486 -METTAIHF 493
ME A F
Sbjct: 345 YMEKAAQVF 353
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 56/345 (16%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++E+ G K + FN +++ +S ++E A + KM+ GL P +Y L++G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 240 NLLRVNEVCREMKCEC---FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
R +E+ M E P++ T+ +L+ A+CK KK +EA +M+E + P
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 297 IFSTLIN-------GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++T+ + ++ + E + EK K NG T VVG YC R+ D
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG-----RTCGIVVGGYCREGRVRDG 279
Query: 350 YRVV-------------------------------DE----MKQCGVGPNSRTYDIILHH 374
R V DE MK+C V + TY +++
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNA 339
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF--CDEERLDMEMAVWDQMRARGI 432
A ++A VF+ M + G +P Y I+ + + E + E+ + +R
Sbjct: 340 WSSAGYMEKAAQVFKEM-VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-- 396
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
P + +F +IS C +D A + F +M G+ P F TL
Sbjct: 397 -PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 135/318 (42%), Gaps = 8/318 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F+ + + G +P + + L+ + K + ++ G D + ++
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNM 291
+S+ N+ + +MK P TY LI Y A K + + M +E N+
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 292 MPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+I F+ L+ K+++EA E +K + G P+T TYN + Y A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 350 YRVVDE---MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
V E MK+ PN RT I++ + ++ RRM EM E + ++
Sbjct: 243 ESEVVEKMVMKE-KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM-KEMRVEANLVVFNS 300
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ F + D V M+ + + + +++A A ++ A + F++M+ G
Sbjct: 301 LINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 467 IRPPANLFSTLKQALIDA 484
++P A+ +S L + + A
Sbjct: 361 VKPDAHAYSILAKGYVRA 378
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V++ + +M++ ++ + FN L++ + + E+ M+ + D+ +Y+
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYS 334
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ WS + + +V +EM +PD Y IL Y +AK+ +A E+ E
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLET 390
Query: 290 NMM---PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
++ P+ IF+T+I+G S+ +D+A+ + K G +P T+ ++ Y +
Sbjct: 391 LIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 450
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
A V+ M+ CGV P + T+ ++ A T E+
Sbjct: 451 WKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E M++ +K +V ++ +++ + +EKA ++F +M G+ PD +Y+IL +G+
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + E+ + E P+VV + +I+ +C D+A+ +++M + + P+
Sbjct: 376 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
F TL+ G K+ +A E + + G PE T+ + A+ + D++ + ++
Sbjct: 435 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINA 494
Query: 356 MK 357
+K
Sbjct: 495 LK 496
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 160/326 (49%), Gaps = 5/326 (1%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++ M G+ P+ FN L+ LC S V+ A+ELFD+M +G P+ ++ IL+ G+ +
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ E+ M+ P+ V Y +++++C+ + D++ +M+E+ ++P
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGF----APETPTYNAVVGAYCWSMRMDDAYRVV 353
F++ I+ L + ++ +A + + + + P + TYN ++ +C ++DA +
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ +++ + ++Y+I L L++ EA +V ++M+ + G P++ +Y+I++ C
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCK 373
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
L + M+ G+ P + L+ C K+DAA Q+M+ P A
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 474 FSTLKQALIDAGMETTAIHFALKIDK 499
+ L +L G + A K+++
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNE 459
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 150/362 (41%), Gaps = 27/362 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG--------- 220
++ EA E KM + G + N +VD LC S ++KA E+ MR G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 221 --------------LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+PDL +Y+ LL G + + EM E +PD V Y I
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
I+ +CK K A +M++K S +++LI GLG ++ E ++ K G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYS 386
+P TYN + C +++DA ++DEM Q + PN ++ ++ K A
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 387 VFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
VF S C Y ++ +L + + + RG G ++ L+ +L
Sbjct: 686 VFETAVSI--CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743
Query: 447 CHANKLDAACKYFQQMLDVGIR-PPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTPL 505
C ++L+ A +M+D G PA L + L G + A FA K+ ++
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVI-DGLGKMGNKKEANSFADKMMEMASVGE 802
Query: 506 VA 507
VA
Sbjct: 803 VA 804
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 24/337 (7%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A FE + + + +N + L + +A+ + +M +G+ P + SY I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + L + MK PD VTYG L++ YC K D A EM N
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ + + L++ L R+ EA E K G+ +T T N +V C S +D A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 351 RVVDEMKQCG-----------VG------------PNSRTYDIILHHLIKARTTQEAYSV 387
+V M+ G +G P+ TY +L+ L KA EA ++
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
F M E +P Y+I + FC + ++ V M +G + + LI L
Sbjct: 547 FAEMMGEK-LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 448 HANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
N++ +M + GI P ++T Q L +
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 141/303 (46%), Gaps = 5/303 (1%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
KP V +N L++ K + VE L+ M G+ P ++ +L+ + E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ EM + +P+ T+GIL+ YCKA D+ + + M+ ++P+ I++T+++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM---KQCGV-G 362
+ R D++ + EK + G P+ T+N+ + A C ++ DA R+ +M + G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
PNS TY+++L K ++A ++F + E ++ +Y+I L+ +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESI-RENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
V QM +GI P ++ + +L+ LC L A M G+ P A + L
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 483 DAG 485
G
Sbjct: 408 SVG 410
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 145/360 (40%), Gaps = 40/360 (11%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD---------------- 214
V A E F++M + G KP F LV CK+ +K EL +
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 215 -------------------KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
KMR GLVPD+ ++ + ++ +L + + +M+ +
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 256 F----EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
+ P+ +TY +++ +CK ++A + ++E + + S ++ + GL +
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA ++ G P +YN ++ C + DA +V MK+ GV P++ TY +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
LH A S+ + M C P T +I+L R+ + +M +G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRN-NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
+++ LC + +LD A + + M G NL ++ + D+ +E +
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 12/215 (5%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
++KG S E++++LI LG Q I L+++MK++ + T KV
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-----RHRGLVPDLK 226
++A ++M + + P V F L++ CK + AQE+F+ + GL
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL----- 700
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
Y+++ LL+ E+ + FE Y L+ + CK + + A G H+M
Sbjct: 701 -YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
++ P +I+GLG EA F +K
Sbjct: 760 IDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 398 EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACK 457
+P+V Y+++L E R++ ++ M GI P + F +LI ALC ++ +DAA +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 458 YFQQMLDVGIRPPANLFSTL-----KQALIDAGME 487
F +M + G +P F L K L D G+E
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 197/465 (42%), Gaps = 56/465 (12%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A + I ++ P S D L LS E++ ++V VLN G LA FF+WA KQ+G++
Sbjct: 45 AQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWG-LAYLFFNWASKQEGYR 103
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVED-MKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
+ +++A+ L + RQ + LV D + R ++ V EA
Sbjct: 104 NDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSV 163
Query: 178 FEKMEKYGL-KPEVSDFNKLVDVLCKSK--SVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
F+++ + GL P +N L++ + KS SVE + +MR G D + T +L+
Sbjct: 164 FDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQV 223
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ R V E+ + + ++ IL+ ++CK + D+A ++E+++ +
Sbjct: 224 YCNTGKSERALSVFNEILSRGWLDEHIST-ILVVSFCKWGQVDKAFELIEMLEERDIRLN 282
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ LI+G + R+D+A + +EK + G + Y+ ++G C ++ A +
Sbjct: 283 YKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYL 342
Query: 355 EMKQCGVGPN-----------------SRTYDIILHHL----------------IKARTT 381
E+K+ G+ P+ SR ++I+ + I+
Sbjct: 343 EIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 382 QEAYSVFRRMSSEMGCE-----------------PTVSTYDIILRLFCDEERLDMEMAVW 424
EAYS + + + P + I++ ++DM + +
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL 462
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ G++PG ++ +I +C + + + K +M D G+ P
Sbjct: 463 HDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 143/335 (42%), Gaps = 1/335 (0%)
Query: 140 IWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
I L++D + L D+ KV AV + + GL P +N +++
Sbjct: 424 IVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEG 483
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+CK E++ +L +M+ G+ P + + +++ + + ++ ++M+ FEP
Sbjct: 484 MCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPW 543
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ L+ C+ + +A + ++ + + + I+GL ++ +D LE +
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
ANG P+ Y+ ++ A C + R +A + +EM G+ P TY+ ++ K
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
S RM + P V TY ++ C R + W++M+ + P F
Sbjct: 664 EIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITF 722
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
LI LC A YF++M + + P + ++
Sbjct: 723 MALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ +KM YG +P + LV LC++ A + D + G + + + T ++
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + R E+ R++ PDV+ Y +LI A CKA + EA ++EM K + P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++++I+G + +D L + + P+ TY +++ C S R +A
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+EMK PN T+ ++ L K + EA FR M E EP + Y ++ F
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM-EEKEMEPDSAVYLSLVSSFLS 766
Query: 414 EERLDMEMAVWDQMRARGILP 434
E ++ ++ +M +G P
Sbjct: 767 SENINAGFGIFREMVHKGRFP 787
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 193/525 (36%), Gaps = 147/525 (28%)
Query: 102 VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXX 160
+L +SF W + K F+ L+E +++R + L T
Sbjct: 253 ILVVSFCKWGQVDKAFE------------------------LIEMLEERDIRLNYKTYCV 288
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
++ +A + FEKM + G+ +++ ++ L+ LCK K +E A L+ +++ G
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 221 LVPD---------------------------------LKSYTILLEG----------WSQ 237
+ PD + Y L EG +S
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSF 408
Query: 238 QQNLLR------VNEVCREMK--CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
QNL+ V+E+ + +K + PD + I+IN KA K D AV H++ +
Sbjct: 409 IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN 468
Query: 290 NMMPSPHIFSTLINGLGSDKRLDE-----------------------------------A 314
++P P +++ +I G+ + R +E A
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ---------------- 358
L+ +K + GF P +V C + R DA + +D++
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 359 -----------------CGVG--PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
C G P+ Y +++ L KA T EA +F M S+ G +P
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK-GLKP 647
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
TV+TY+ ++ +C E +D ++ +M P + + LI LC + + A +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 460 QQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+M P F L Q L G A+ + ++++ P
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +E F + G P+V ++ L+ LCK+ +A LF++M +GL P + +Y
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++GW ++ + R M + PDV+TY LI+ C + + EA+ ++EM+ K+
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ F LI GL EAL ++ + + P++ Y ++V ++ S ++ +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 351 RVVDEMKQCGVGPNS--RTY 368
+ EM G P S R Y
Sbjct: 775 GIFREMVHKGRFPVSVDRNY 794
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 194/498 (38%), Gaps = 77/498 (15%)
Query: 60 DKICKILSKS-PNSTIDAALADL---SVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEK 113
+ + ILS++ N+++ A + D+ +SP + L NAG++ A S F +
Sbjct: 110 NAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVRE 169
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVE----DMKQRKL-LTRDTXXXXXXXXXXX 168
+ +++ L+EA+ K V LVE +M+ + T
Sbjct: 170 MGLCVPNAYTYNCLLEAISKSNSSSV--ELVEARLKEMRDCGFHFDKFTLTPVLQVYCNT 227
Query: 169 XKVKEAVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
K + A+ F ++ G L +S LV CK V+KA EL + + R + + K+
Sbjct: 228 GKSERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFELIEMLEERDIRLNYKT 285
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y +L+ G+ ++ + + ++ +M+ D+ Y +LI CK K + A+ Y E++
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK 345
Query: 288 EKNMMPSPHI---------------------------------FSTLINGLGSDKRLDEA 314
+ P I + +L G + + EA
Sbjct: 346 RSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEA 405
Query: 315 LEFYEKFKAN------------------GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
F + N P++ + + V+ + ++D A ++ ++
Sbjct: 406 YSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDI 465
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEER 416
Q G+ P Y+ I+ + K ++E+ + M + G EP+ T + I C ER
Sbjct: 466 VQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-KDAGVEPSQFTLNCIYG--CLAER 522
Query: 417 LDMEMA--VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG-----IRP 469
D A + +MR G P + L+ LC + ACKY + G +
Sbjct: 523 CDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 470 PANLFSTLKQALIDAGME 487
A + +K +D G+E
Sbjct: 583 TAAIDGLIKNEGVDRGLE 600
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA F +M GLKP V+ +N ++D CK +++ +M PD+ +YT
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 230 ILLEGWSQQ----QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
L+ G + + R NE MK + P+ +T+ LI CK EA+ ++ E
Sbjct: 689 SLIHGLCASGRPSEAIFRWNE----MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+EK M P ++ +L++ S + ++ + + G P + N ++ S
Sbjct: 745 MEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKF 804
Query: 346 MDD 348
++D
Sbjct: 805 VED 807
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 17/325 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA+ F +M+ GL P++ ++ ++ LCK + A L+D+M + ++P+ +++
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G Q+ LL + + D+V Y I+I+ Y K+ +EA+ + + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--CWSMRMD 347
+ PS F++LI G + + EA + + K G AP +Y ++ AY C + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL------------HHLIKARTTQEAYSVFRRMSSEM 395
D R EMK G+ P + TY +I +H+++ R ++ R M SE
Sbjct: 558 DELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE- 614
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
G P TY+ I++ C + L + M++R + + +LI +LC + A
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQA 480
+ + + + ++TL +A
Sbjct: 675 DSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 178/404 (44%), Gaps = 14/404 (3%)
Query: 90 VAEVLNKL-SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
V E++++L S + L++ FF F+HS+ S + L R+FK + ++E +
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 149 QRKLLTRD------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
Q + R V +++ +KM+ L +N VL
Sbjct: 112 QEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS---VLYH 168
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+ +K +++ +++ + + +Y+ +++G +QQ L R + + P VV+
Sbjct: 169 FRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ +++ YCK D A F+ + + ++PS + + LINGL + EALE
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
+G P++ TYN + + + A+ V+ +M G+ P+ TY I+L +
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+ + M S ++ ++L C R+D +++++QM+A G+ P + + ++
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
I LC K D A + +M D I P + L L GM
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 86/399 (21%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+E M K+G++P+ +N L + A E+ M +GL PD+ +YTI
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 231 LLEGWSQQQNL------------------------LRVNEVCR------------EMKCE 254
LL G Q N+ + ++ +C+ +MK +
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH------------------ 296
PD+V Y I+I+ CK K+D A+ Y EM +K ++P+
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 297 -----------------IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+++ +I+G ++EALE ++ G P T+N+++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
YC + + +A +++D +K G+ P+ +Y ++ T+ + R M +E G P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE-GIPP 571
Query: 400 TVSTYDIILRLFCD-----------EERL--DMEMAVWDQMRARGILPGMHVFFVLISAL 446
T TY +I + C ER+ + + D M + GI P + +I L
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD-MESEGIPPDQITYNTIIQYL 630
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
C L A + + M + + ++ L +L G
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA+E F+ + + G+ P V+ FN L+ CK++++ +A+++ D ++ GL P + SYT
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ ++ N ++E+ REMK E P VTY ++ C+ K++ H ++E+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC---NHVLRER- 599
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
IF GL ++ G P+ TYN ++ C + A+
Sbjct: 600 ------IFEKCKQGL-------------RDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ MK + +S TY+I++ L ++A S + E + Y +++
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ-EQNVSLSKFAYTTLIKA 699
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
C + +M + ++ Q+ RG + + +I+ LC
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 17/325 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA+ F +M+ GL P++ ++ ++ LCK + A L+D+M + ++P+ +++
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G Q+ LL + + D+V Y I+I+ Y K+ +EA+ + + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--CWSMRMD 347
+ PS F++LI G + + EA + + K G AP +Y ++ AY C + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL------------HHLIKARTTQEAYSVFRRMSSEM 395
D R EMK G+ P + TY +I +H+++ R ++ R M SE
Sbjct: 558 DELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE- 614
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
G P TY+ I++ C + L + M++R + + +LI +LC + A
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQA 480
+ + + + ++TL +A
Sbjct: 675 DSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 178/404 (44%), Gaps = 14/404 (3%)
Query: 90 VAEVLNKL-SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
V E++++L S + L++ FF F+HS+ S + L R+FK + ++E +
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 149 QRKLLTRDTXXXXXX------XXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
Q + R V +++ +KM+ L +N VL
Sbjct: 112 QEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS---VLYH 168
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+ +K +++ +++ + + +Y+ +++G +QQ L R + + P VV+
Sbjct: 169 FRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ +++ YCK D A F+ + + ++PS + + LINGL + EALE
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
+G P++ TYN + + + A+ V+ +M G+ P+ TY I+L +
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+ + M S ++ ++L C R+D +++++QM+A G+ P + + ++
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
I LC K D A + +M D I P + L L GM
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 86/399 (21%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+E M K+G++P+ +N L + A E+ M +GL PD+ +YTI
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 231 LLEGWSQQQNL------------------------LRVNEVCR------------EMKCE 254
LL G Q N+ + ++ +C+ +MK +
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH------------------ 296
PD+V Y I+I+ CK K+D A+ Y EM +K ++P+
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 297 -----------------IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+++ +I+G ++EALE ++ G P T+N+++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEP 399
YC + + +A +++D +K G+ P+ +Y ++ T+ + R M +E G P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE-GIPP 571
Query: 400 TVSTYDIILRLFCD-----------EERL--DMEMAVWDQMRARGILPGMHVFFVLISAL 446
T TY +I + C ER+ + + D M + GI P + +I L
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD-MESEGIPPDQITYNTIIQYL 630
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
C L A + + M + + ++ L +L G
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA+E F+ + + G+ P V+ FN L+ CK++++ +A+++ D ++ GL P + SYT
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ ++ N ++E+ REMK E P VTY ++ C+ K++ H ++E+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC---NHVLRER- 599
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
IF GL ++ G P+ TYN ++ C + A+
Sbjct: 600 ------IFEKCKQGL-------------RDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ MK + +S TY+I++ L ++A S + E + Y +++
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ-EQNVSLSKFAYTTLIKA 699
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
C + +M + ++ Q+ RG + + +I+ LC
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 4/360 (1%)
Query: 127 LIEALGKI-RQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
LI L K R K +W + E M ++ + ++D +EA+ +MEK
Sbjct: 314 LITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G++ +N L+D KS +E+ + LF +MR +GL P +Y IL++ ++++ V
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKY-DEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+ REM+ EP+V +Y LI+AY + KK D A + M++ + PS H ++ LI+
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
++A +E+ G P TY +V+ A+ S + M + +
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
TY+ +L K EA V S+MG +P+V TY++++ + + +
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEF-SKMGLQPSVMTYNMLMNAYARGGQDAKLPQL 612
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
+M A + P + +I A A Y + M+ G P + L+ L D
Sbjct: 613 LKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILED 672
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA-KKYDEAVGF 282
D++ Y + G S Q EV M PD VT ILI KA + E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ +M EK + S +F L+ + +EAL + + G T YN ++ AY
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
S +++ + EM+ G+ P++ TY+I++ + ++ R M ++G EP V
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVK 450
Query: 403 TYDIILRLFCDEERL-DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
+Y ++ + +++ DM + +M+ G+ P H + LI A + + A F++
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 462 MLDVGIRPPANLFSTLKQALIDAG 485
M GI+P ++++ A +G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSG 534
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 11/292 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKV 171
+ KG K S +++ L++A + Q ++ L+ +M+ L + K+
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 172 KE-AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A + F +M+K GLKP + L+ S EKA F++M G+ P +++YT
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+L+ + + + ++ E+ + M E + +TY L++ + K Y EA E +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
Query: 291 MMPSPHIFSTLINGL---GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ PS ++ L+N G D +L + L ++ A P++ TY+ ++ A+
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKLPQLL---KEMAALNLKPDSITYSTMIYAFVRVRDFK 642
Query: 348 DAYRVVDEMKQCGVGPNSRTYD---IILHHLIKARTTQEAYSVFRRMSSEMG 396
A+ M + G P+ R+Y+ IL K + ++ ++ ++S+ G
Sbjct: 643 RAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFG 694
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 282 FYHEMQ-EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
FY M ++ + SP S L LG ++ D L + YNA +
Sbjct: 224 FYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGL 283
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA-RTTQEAYSVFRRMSSEMGCEP 399
S R DDA+ V + M + V P++ T I++ L KA R+ +E + +F +MS E G +
Sbjct: 284 SASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMS-EKGVKW 342
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+ + +++ FCDE + + + +M +GI V+ L+ A +N ++ F
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 460 QQMLDVGIRPPANLFSTLKQA 480
+M D G++P A ++ L A
Sbjct: 403 TEMRDKGLKPSAATYNILMDA 423
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 197/495 (39%), Gaps = 37/495 (7%)
Query: 3 FSRSPKRFFNLFSSNLPLSKPYPASLTPLST-SPTIKLPQNLSGSLRIHTLIPHTPHADK 61
S S F N S N + P+ P S+ +P L + + + D+
Sbjct: 23 LSLSASSFRNFTSGNNGDAIPFSTFTKPSSSIAPGDFLVREWKDWFKHRDVKQSHQLIDR 82
Query: 62 ICKILSKSPNSTIDAA----LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
I IL N D A L++L + ++ + V +VL+ + L FF WA +Q GF
Sbjct: 83 IFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGF 142
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX------XXXXXXXXXXXKV 171
H+ +FHA+ + L R K++ L+ D R + +
Sbjct: 143 HHTRATFHAIFKIL---RGAKLV-TLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRT 198
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ F M GL + ++ L++ L + K + +FD++ RG V + +++IL
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSIL 257
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + +Q L + R + GIL++A C +K+ EA E++
Sbjct: 258 VKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGT 317
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ I L L+ +F +K G E YN++V +D Y
Sbjct: 318 VNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVY 377
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ EM GV PN +T + L KA EA ++R SE+G PT +Y+ ++
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRS-RSEIGFAPTAMSYNYLIHT 436
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLD----------------- 453
C E ++ V RG G F L +ALC K D
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPK 496
Query: 454 --AACKYFQQMLDVG 466
A CK + DVG
Sbjct: 497 RIAGCKIISALCDVG 511
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 123/247 (49%), Gaps = 15/247 (6%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV---PDLKSYTILLEG-- 234
+M++ G P S + ++ +C+ +S EK F + L +++Y + +EG
Sbjct: 557 RMQEKGYTPTRSLYRNVIQCVCEMESGEK--NFFTTLLKFQLSLWEHKVQAYNLFIEGAG 614
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
++ + L R+ V M + P V + +++ +Y K +K +A+ F+H+++E+
Sbjct: 615 FAGKPKLARL--VYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGK-TK 671
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
++ +I GL +LD+A+ F E+ K G P Y + C + D+A +V+
Sbjct: 672 KRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVN 731
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
E ++ G + +++LH+ +K++ EA++ R + ++ P + + ++ LF
Sbjct: 732 EFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKI---PEMKSLGELIGLF--S 786
Query: 415 ERLDMEM 421
R+DME+
Sbjct: 787 GRIDMEV 793
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 139/320 (43%), Gaps = 15/320 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA+E + + G P +N L+ LC ++SVE+A ++ RG K+++
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 231 LLEG--WSQQQNLLRVNEVCREMKCECFEPDVVTYGI----LINAYCKAKKYDEAVGFYH 284
L W + ++ RE+ E D++ I +I+A C K ++A+
Sbjct: 468 LTNALCWKGKPDM------ARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINE 521
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+ + S +F++LI G + R D A + + + G+ P Y V+ C
Sbjct: 522 LFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEME 581
Query: 345 RMDDAYRVVDEMKQCGVGPNS-RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
+ + Q + + + Y++ + A + A V+ M + G PTV++
Sbjct: 582 SGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRD-GITPTVAS 640
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
++L+ + E++ + + +R +G ++ V+I LC ANKLD A + ++M
Sbjct: 641 NILMLQSYLKNEKIADALHFFHDLREQGKTK-KRLYQVMIVGLCKANKLDDAMHFLEEMK 699
Query: 464 DVGIRPPANLFSTLKQALID 483
G++P + Q L +
Sbjct: 700 GEGLQPSIECYEVNIQKLCN 719
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K K A ++ M++ G+ P V+ ++ K++ + A F +R +G + Y
Sbjct: 618 KPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQ 676
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G + L EMK E +P + Y + I C +KYDEAVG +E ++
Sbjct: 677 VMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKS 736
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--------- 340
+ I + L++ K + EA + PE + ++G +
Sbjct: 737 GRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELIGLFSGRIDMEVE 794
Query: 341 ----------CWSMRM---------------DDAYRVVDEMKQCGVGPNSRTYDIIL 372
C+ + M +DAY +V+ + + G PN RT D+IL
Sbjct: 795 LKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNERT-DMIL 850
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 172/355 (48%), Gaps = 6/355 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
K+ G +++++I GK + F+ L+++M + +L + K
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA+ F +M++ +++ N ++DV + V++A LF +R + P++ SY +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI 371
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + + + + R M+ + E +VVTY +I Y K ++++A EMQ + +
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +ST+I+ G +LD A ++K +++G + Y ++ AY M A R
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++ E+K P++ + + L KA T+EA VFR+ + E G +S + ++ L+
Sbjct: 492 LLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQ-AFESGEVKDISVFGCMINLY 546
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+R + V+++MR G P +V ++++A + + A +++M + G
Sbjct: 547 SRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL-----EG-------W 235
P V +N ++ + ++K + A LFD+MR R L PD +Y+ L+ EG W
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 236 SQQQNLLRVN----------EVCREM-------------KCECFEPDVVTYGILINAYCK 272
Q+ RV+ E+ R + K PD+V Y +IN Y K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
AK + EA EM E ++P+ +STL++ + + EAL + + K A + T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 333 YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS 392
N ++ Y + +A R+ +++ + PN +Y+ IL +A EA +FR M
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 393 SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKL 452
+ E V TY+ +++++ + + +M++RGI P + +IS A KL
Sbjct: 393 RK-DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 453 DAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
D A FQ++ G+ L+ T+ A G+
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGL 485
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 137/294 (46%), Gaps = 5/294 (1%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ F ++++ G+ P++ +N +++V K+K +A+ L +M G++P+ SY+ LL
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + L V EMK D+ T I+I+ Y + EA + +++ ++
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++T++ G + EA+ + + TYN ++ Y +M + A +
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
V EM+ G+ PN+ TY I+ KA A ++F+++ S G E Y ++ +
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAY- 480
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
ER+ + M ++ LP I+ L A + + A F+Q + G
Sbjct: 481 --ERVGL-MGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 124/259 (47%), Gaps = 10/259 (3%)
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
Q++L ++ V E K + P V Y +++ +AK++D A G + EM+++ + P +
Sbjct: 136 QRSLALLDWVHEEAK---YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD---AYRVVD 354
+STLI G + D AL + +K + + + + Y+ ++ S R+ D A +
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL---SRRLCDYSKAISIFS 249
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
+K+ G+ P+ Y+ +++ KA+ +EA + + M+ E G P +Y +L ++ +
Sbjct: 250 RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN-EAGVLPNTVSYSTLLSVYVEN 308
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
+ ++V+ +M+ + ++I + + A + F + + I P +
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 475 STLKQALIDAGMETTAIHF 493
+T+ + +A + AIH
Sbjct: 369 NTILRVYGEAELFGEAIHL 387
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%)
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+ +L K+ E+A +F + G V D+ + ++ +S+ Q + V EV +M+ +
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY 567
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
PD +++NAY K +++++A Y EMQE+ + + +++ S K +
Sbjct: 568 FPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVES 627
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+++ +++ + V Y + +++DA RV++ M++ G+
Sbjct: 628 LFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 148/316 (46%), Gaps = 2/316 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA +M + G++P+V+ +N L+ K+ + + +LFD+M H GL PD+ SY
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 231 LLEGWSQQQNLLRVNEVCRE-MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + + ++ E + P + TY IL++A CK+ D A+ + ++ +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ LINGL +R+ + K +G+ P TY ++ Y + R++
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ +MK+ G + ++ LIK +EAY + + +Y+ +L
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
L+ + LD + +++ +G+ P + ++++ L + A K+ + ++G++P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 470 PANLFSTLKQALIDAG 485
+ L L AG
Sbjct: 363 SVVTCNCLIDGLCKAG 378
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 153/319 (47%), Gaps = 11/319 (3%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E + GL P + +N L+D LCKS + A ELF ++ R + P+L +Y IL+ G +
Sbjct: 143 EDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKS 201
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + V+ + RE+K + P+ VTY ++ Y K K+ ++ + + +M+++
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 299 STLINGLGSDKRLDEALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+++ L R +EA E +E ++ + + +YN ++ Y +D +++E++
Sbjct: 262 CAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G+ P+ T+ II++ L+ T A + EMG +P+V T + ++ C +
Sbjct: 322 MKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIG-EMGMQPSVVTCNCLIDGLCKAGHV 380
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
D M ++ M R + ++ LC +L A K + G++ P S+
Sbjct: 381 DRAMRLFASMEVRDEF----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIP----SSA 432
Query: 478 KQALIDAGMETTAIHFALK 496
++A++ ET + A K
Sbjct: 433 RRAVLSGIRETVSYQAARK 451
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
N V+ LCK +++E+A+ L G++PD+ +Y L++G+++ + V R M+
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
EPDV TY LI+ K + + + EM + P ++TL++ R
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 313 EALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA + +E G P TYN ++ A C S D+A + +K V P TY+I+
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNIL 194
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
++ L K+R + R + G P TY +L+++ +R++ + ++ +M+ G
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKS-GYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
++SAL + + A + +++ G R
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
PDV+TY LI Y + DEA M+E + P +++LI+G + L+ L+
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE-MKQCGVGPNSRTYDIILHHLI 376
+++ +G +P+ +YN ++ Y R +A++++ E + G+ P TY+I+L L
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K+ T A +F+ + S + +P + TY+I++ C R+ + +++ G P
Sbjct: 166 KSGHTDNAIELFKHLKSRV--KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ ++ +++ + F +M G + ALI G
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
I +N+ CK + + A + ++P ++TLI G +DEA + +
Sbjct: 18 ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA 77
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
G P+ TYN+++ ++ ++ ++ DEM G+ P+ +Y+ ++ K EA
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
+ + G P + TY+I+L C D + ++ +++R + P + + +LI+
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILIN 196
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
LC + ++ + +++ G P A ++T+
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
T N V + C ++ A ++ + + GV P+ TY+ ++ + EAY+V R
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHA 449
RM E G EP V+TY+ ++ L+ + ++D+M G+ P M + L+S
Sbjct: 73 RM-REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 450 NKLDAACKYFQQMLDV-GIRPPANLFSTLKQALIDAGMETTAIHF 493
+ A K + + + G+ P + ++ L AL +G AI
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL 176
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPE-VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+ +EA E ++ + G + + + +N L+++ K +++ +L +++ +GL PD ++
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 229 TILLEGWSQQQNLLRVNEVCREMKC---ECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
TI++ G N+ + + C +P VVT LI+ CKA D A+ +
Sbjct: 333 TIIVNGL---LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRL 311
M+ ++ ++++++ L D RL
Sbjct: 390 MEVRD----EFTYTSVVHNLCKDGRL 411
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 138/315 (43%), Gaps = 4/315 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA K++ +G+ + + ++D CK E+A +L R R P++ Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L ++LR + + +E+ PD V Y +I+ YC + D+A ++ + +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
PS + LI + +A + K G + TYN ++ Y + +++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++DEM+ G+ P+ TY+I++H ++ EA + + G P+ + ++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR-GFVPSTLAFTDVIGG 557
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F +W M + P + L+ C A +++ A F ++LD G++P
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 471 ANLFSTLKQALIDAG 485
L++TL G
Sbjct: 618 VVLYNTLIHGYCSVG 632
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + E + + + L+P + ++ + +C + + +A +F ++ GL+PD YT
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + + + P + T ILI A + +A + M+ +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ L++G G +L++ E ++ ++ G +P+ TYN ++ + +D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ E+ + G P++ + ++ K QEA+ ++ M +++ +P V T +L
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM-ADLRMKPDVVTCSALLH 591
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C +R++ + +++++ G+ P + ++ LI C ++ AC+ M+ G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F+++ + GL P+ + ++D C +KA + F + G P L + TIL+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
S+ ++ V R MK E + DVVTY L++ Y K + ++ EM+ + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI+ + +DEA E + GF P T + V+G + +A+ +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
M + P+ T +LH KA+ ++A +F ++ + G +P V Y+ ++ +C
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL-LDAGLKPDVVLYNTLIHGYCS 630
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
++ + M RG+LP L+ L
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 145/334 (43%), Gaps = 4/334 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E E M G + + + C +K EL M+H G+ PD+ ++T+ ++
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ L V ++K D V+ +I+ +CK K +EA+ H + + P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRP 371
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++S+ ++ + S + A +++ G P+ Y ++ YC R D A++
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ + G P+ T I++ + + +A SVFR M +E G + V TY+ ++ +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGK 490
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+L+ + D+MR+ GI P + + +LI ++ +D A + +++ G P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
F+ + G A + LR P V
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A F M+ GLK +V +N L+ K+ + K EL D+MR G+ PD+ +Y I
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + NE+ E+ F P + + +I + K + EA + M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P S L++G +R+++A+ + K G P+ YN ++ YC ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 351 RVVDEMKQCGVGPNSRTY 368
++ M Q G+ PN T+
Sbjct: 639 ELIGLMVQRGMLPNESTH 656
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A + F + K G P ++ L+ + S+ A+ +F M+ GL D+ +Y
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L +V E+ EM+ PDV TY ILI++ DEA E+ +
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+PS F+ +I G EA + P+ T +A++ YC + RM+ A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+ +++ G+ P+ Y+ ++H ++A + M + G P ST+
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM-VQRGMLPNESTH 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-- 170
K +G K +++ L+ GK Q ++ L+++M+ + + D +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNILIHSMVVRGY 528
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA E ++ + G P F ++ K ++A L+ M + PD+ + +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL G+ + Q + + + ++ +PDVV Y LI+ YC ++A M ++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 291 MMPSPHIFSTLINGL 305
M+P+ L+ GL
Sbjct: 649 MLPNESTHHALVLGL 663
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ ILI+ + +K + A+ +++ + + PS + +L+ + L+ A EF E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
+ G + + YC D + ++ MK G+ P+ + + + L KA
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
+EA SV ++ G + ++ FC + + + + R R P + V+
Sbjct: 323 KEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+S +C + A FQ++ ++G+ P ++T+ + G A +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 138/315 (43%), Gaps = 4/315 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA K++ +G+ + + ++D CK E+A +L R R P++ Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L ++LR + + +E+ PD V Y +I+ YC + D+A ++ + +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
PS + LI + +A + K G + TYN ++ Y + +++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++DEM+ G+ P+ TY+I++H ++ EA + + G P+ + ++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR-GFVPSTLAFTDVIGG 557
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
F +W M + P + L+ C A +++ A F ++LD G++P
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 471 ANLFSTLKQALIDAG 485
L++TL G
Sbjct: 618 VVLYNTLIHGYCSVG 632
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + E + + + L+P + ++ + +C + + +A +F ++ GL+PD YT
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + + + P + T ILI A + +A + M+ +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ L++G G +L++ E ++ ++ G +P+ TYN ++ + +D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ E+ + G P++ + ++ K QEA+ ++ M +++ +P V T +L
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM-ADLRMKPDVVTCSALLH 591
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+C +R++ + +++++ G+ P + ++ LI C ++ AC+ M+ G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F+++ + GL P+ + ++D C +KA + F + G P L + TIL+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
S+ ++ V R MK E + DVVTY L++ Y K + ++ EM+ + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI+ + +DEA E + GF P T + V+G + +A+ +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
M + P+ T +LH KA+ ++A +F ++ + G +P V Y+ ++ +C
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL-LDAGLKPDVVLYNTLIHGYCS 630
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
++ + M RG+LP L+ L
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 145/334 (43%), Gaps = 4/334 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E E M G + + + C +K EL M+H G+ PD+ ++T+ ++
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ L V ++K D V+ +I+ +CK K +EA+ H + + P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRP 371
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++S+ ++ + S + A +++ G P+ Y ++ YC R D A++
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+ + G P+ T I++ + + +A SVFR M +E G + V TY+ ++ +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGK 490
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+L+ + D+MR+ GI P + + +LI ++ +D A + +++ G P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 474 FSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
F+ + G A + LR P V
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A F M+ GLK +V +N L+ K+ + K EL D+MR G+ PD+ +Y I
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + NE+ E+ F P + + +I + K + EA + M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P S L++G +R+++A+ + K G P+ YN ++ YC ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 351 RVVDEMKQCGVGPNSRTY 368
++ M Q G+ PN T+
Sbjct: 639 ELIGLMVQRGMLPNESTH 656
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A + F + K G P ++ L+ + S+ A+ +F M+ GL D+ +Y
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L +V E+ EM+ PDV TY ILI++ DEA E+ +
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+PS F+ +I G EA + P+ T +A++ YC + RM+ A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+ +++ G+ P+ Y+ ++H ++A + M + G P ST+
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM-VQRGMLPNESTH 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-- 170
K +G K +++ L+ GK Q ++ L+++M+ + + D +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNILIHSMVVRGY 528
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA E ++ + G P F ++ K ++A L+ M + PD+ + +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL G+ + Q + + + ++ +PDVV Y LI+ YC ++A M ++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 291 MMPSPHIFSTLINGL 305
M+P+ L+ GL
Sbjct: 649 MLPNESTHHALVLGL 663
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ ILI+ + +K + A+ +++ + + PS + +L+ + L+ A EF E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
+ G + + YC D + ++ MK G+ P+ + + + L KA
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
+EA SV ++ G + ++ FC + + + + R R P + V+
Sbjct: 323 KEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+S +C + A FQ++ ++G+ P ++T+ + G A +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 1/273 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E E M G P++ +N LV+ C+ ++E+ + + GL + +Y LL
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ V E+ M + P V+TY ILIN CKA+ A+ F+++M E+ +P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++T++ + + +D+A+E K P TYN+V+ M A +
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
+M G+ P+ T +++ +A +EA V + S+ G STY ++++ C
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR-GNGIRGSTYRLVIQGLCK 501
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
++ ++M + V + M G P ++ ++ +
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 150/320 (46%), Gaps = 1/320 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+ ++ + G P + + LV+++C+ +A E+ + M G PD+ +Y L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ ++ NL V V + + E + VTY L+++ C + +DE + M + +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++ LINGL + L A++F+ + P+ TYN V+GA +DDA
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++ +K P TY+ ++ L K ++A ++ +M + G P T ++ F
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM-LDAGIFPDDITRRSLIYGF 464
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C ++ V + RG + ++I LC +++ A + + ML G +P
Sbjct: 465 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 524
Query: 472 NLFSTLKQALIDAGMETTAI 491
+++ + + + + GM + A+
Sbjct: 525 TIYTAIVKGVEEMGMGSEAV 544
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 7/303 (2%)
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N+++ LC + + A +L + M VP S + L+ G ++ L + + R M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
PD +TY ++I CK A+ +M P ++T+I + ++
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 314 ALEFYEKFKANGFAPETPTYNA---VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
A+ F++ NG P TY +V YC S R A V+++M G P+ TY+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR---AIEVLEDMAVEGCYPDIVTYNS 284
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
++++ + +E SV + + S G E TY+ +L C E D + + M
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSH-GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT 343
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
P + + +LI+ LC A L A +F QML+ P ++T+ A+ GM A
Sbjct: 344 SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 491 IHF 493
I
Sbjct: 404 IEL 406
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 1/240 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++E + + +GL+ +N L+ LC + ++ +E+ + M P + +Y
Sbjct: 294 NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ G + + L R + +M + PD+VTY ++ A K D+A+ ++
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P ++++I+GL + +ALE Y + G P+ T +++ +C + +++A
Sbjct: 414 CCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEA 473
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+V+ E G G TY +++ L K + + A V M + GC+P + Y I++
Sbjct: 474 GQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG-GCKPDETIYTAIVK 532
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 1/324 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A + E M ++ P + LV L + ++KA + M G VPD +Y
Sbjct: 119 KLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYN 178
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ ++ ++ + +M PDV+TY +I ++A+ F+ + +
Sbjct: 179 MIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN 238
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P ++ L+ + A+E E G P+ TYN++V C +++
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
V+ + G+ N+ TY+ +LH L E + M C PTV TY+I++
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC-PTVITYNILIN 357
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C L + + QM + LP + + ++ A+ +D A + + + P
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417
Query: 470 PANLFSTLKQALIDAGMETTAIHF 493
++++ L G+ A+
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALEL 441
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 1/225 (0%)
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
E D T +++ C K +A M N +P S L+ GL +LD+A+
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+G P+T TYN ++G C + A ++++M G P+ TY+ ++ +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
++A F + + GC P + TY +++ L C + V + M G P +
Sbjct: 221 DYGNAEQAIR-FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ L++ C L+ Q +L G+ ++TL +L
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 134/337 (39%), Gaps = 40/337 (11%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC---------------------------- 201
V +A+ F M KYG++P N +V LC
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 202 -----------KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
K+ +V +A E++ +M + + D Y +++ G N++ +
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
M PDV TY LI+A CK K+DEA + MQ + P + +I GL
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
++ A EF + PE +N V+ Y A V++ M GV PN T +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
++H +K +A+ V M S P +TY+++L C L + ++D+M R
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTK-IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
G P + + L+ LC +L A ++ GI
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 148/390 (37%), Gaps = 75/390 (19%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ A+ +KM G+ P + N L++ LCK+ +EKA L +MR G P+ SY
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYN 195
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC------------------ 271
L++G N+ + + M P+ VT I+++A C
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 272 ---------------------KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
K +A+ + EM +KN+ +++ +I GL S
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
+ A F G P+ TYN ++ A C + D+A + M+ GV P+ +Y +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 371 ILHHLI-----------------------------------KARTTQEAYSVFRRMSSEM 395
I+ L + T A SV M S
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS-Y 434
Query: 396 GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
G +P V T + ++ + RL V ++MR+ I P + +L+ A C L A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 456 CKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ + +ML G +P ++ L + L G
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 22/328 (6%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KE E + Y LK + L + +C++KS + L H ++ DL
Sbjct: 81 KEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCL---SIHSSIMRDL-----C 132
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+G LR ++M P ++T+ L+N CKA ++A G EM+E M
Sbjct: 133 LQGKLDAALWLR-----KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE--M 185
Query: 292 MPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW-SMRMDD 348
PSP+ ++TLI GL S +D+AL + G P T N +V A C + ++
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 349 AYRVVDEM---KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
++++E+ Q + I++ K +A V++ MS + +V Y+
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV-VYN 304
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
+I+R C + M RG+ P + + LISALC K D AC M +
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 466 GIRPPANLFSTLKQALIDAGMETTAIHF 493
G+ P + + Q L G A F
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 35/245 (14%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G+ P+V +N L+ LCK ++A +L M++ G+ PD SY ++++G +
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 241 LLRVNE-----------------------------------VCREMKCECFEPDVVTYGI 265
+ R NE V M +P+V T
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
LI+ Y K + +A +EM+ + P ++ L+ + L A + Y++ G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
P+ TY +V CW R+ A ++ ++ G+ + + I+ + + EAY
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Query: 386 SVFRR 390
V+++
Sbjct: 566 LVYKK 570
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
SP V +++ S+ +LA F +A +Q F+HS S LI LG+ R F +I +++
Sbjct: 50 SPTRVQKLIASQSDP-LLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 146 DMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
+ LT + ++ + TF KM ++ P+ N+++DVL +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 205 S-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++KA ELF R G++P+ +SY +L++ + +L ++ +M PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
ILI +C+ + + A+ +M K +P TLI GL DE ++ E+ +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
GF+P N +V +C ++++A VV+ + + G +S T+++++
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR--MDDAYR 351
+ IF+ LI K ++ L + K F P+ N ++ S R + A+
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV-SHRGYLQKAFE 176
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ + GV PN+R+Y++++ AY +F +M E P V +Y I+++ F
Sbjct: 177 LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGF 235
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C + +++ M + D M +G +P LI LC D KY ++M+ G P
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
F + Q+ N S LI LG + + + K +++G+ + ++ Y
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART-TQEAYSVFRRMSSEM-GCEP 399
+ + +M + P + + IL L+ R Q+A+ +F+ SS + G P
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK--SSRLHGVMP 188
Query: 400 TVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYF 459
+Y+++++ FC + L + ++ +M R ++P + + +LI C +++ A +
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 460 QQMLDVGIRPPANLFSTL-KQALIDAG 485
ML+ G P L L Q + D G
Sbjct: 249 DDMLNKGFVPDRTLIGGLCDQGMFDEG 275
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 4/303 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E ++++G KP+ +N L+ +S + A +LFD+M + + P ++ L+ G
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 236 SQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + ++ +M K P V Y LI A C+ + A E E +
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
I+STLI+ L R +E E+ G P+T TYN ++ +C + A RV+D
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD 317
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
EM + G+ P+ +Y++IL + + +EA +F M GC P +Y I+ C+
Sbjct: 318 EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-GCSPDTLSYRIVFDGLCEG 376
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
+ + + D+M +G P + LC + KL+ K L GI A+++
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS-LHRGIAGDADVW 435
Query: 475 STL 477
S +
Sbjct: 436 SVM 438
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 147/313 (46%), Gaps = 3/313 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ F++M +Y + V N L+ L K +EK +E + G PD +Y IL+
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIH 160
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNMM 292
G SQ ++ EM + +P VT+G LI+ CK + EA+ H+M + +
Sbjct: 161 GCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVR 220
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ HI+++LI L L A + ++ + Y+ ++ + + R ++ +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
++EM + G P++ TY+++++ ++ A V M E G +P V +Y++IL +F
Sbjct: 281 LEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV-EKGLKPDVISYNMILGVFF 339
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
++ + +++ M RG P + ++ LC + + A +ML G +P +
Sbjct: 340 RIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRD 399
Query: 473 LFSTLKQALIDAG 485
Q L ++G
Sbjct: 400 RLEGFLQKLCESG 412
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+++ LI + F L ++M ++K+ T T +VKEA++ M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 182 EK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
K YG++P V + L+ LC+ + A +L D+ + D Y+ L+ +
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
V+ + EM + +PD VTY +LIN +C + A EM EK + P ++
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
++ K+ +EA +E G +P+T +Y V C ++ ++A ++DEM G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 361 VGPNSRTYDIILHHLIKA 378
P + L L ++
Sbjct: 394 YKPRRDRLEGFLQKLCES 411
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 28/244 (11%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVG-FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
F ++ Y I+I +K +DE H + ++P+ IF +IN G K A
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 315 LEFYEKFKANGFAPETPTYNA-----------VVGAYCWSM-RMDDAYRVVDEMKQCGVG 362
L ++ E P Y C + +M + +DE +
Sbjct: 103 LHMFD---------EMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK---- 149
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
P++ TY+I++H ++ +A +F M + +PT T+ ++ C + R+ +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 423 V-WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ D ++ G+ P +H++ LI ALC +L A K + + I+ A ++STL +L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 482 IDAG 485
I AG
Sbjct: 269 IKAG 272
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 5/365 (1%)
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
+L+ED+ QR LL D K + AV+ + K L P +S FN L+ V
Sbjct: 421 SLLEDLDQRDLL--DMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCA 478
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
S+ +E A+ + ++ G+ D K YT L+ ++ + + EV +M E ++
Sbjct: 479 SSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLH 538
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
T+G LI+ +A + +A G Y ++ KN+ P +F+ LI+ G +D A + +
Sbjct: 539 TFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM 598
Query: 322 KANG--FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
KA P+ + A++ A C + +++ A V + + G+ Y I ++ K+
Sbjct: 599 KAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSG 658
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
A S+++ M E P + ++ + + LD + +++GI G +
Sbjct: 659 DWDFACSIYKDM-KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISY 717
Query: 440 FVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
L+ A C+A A + ++++ + +RP + + L AL + A+ + +I
Sbjct: 718 SSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKT 777
Query: 500 LRKTP 504
L P
Sbjct: 778 LGLKP 782
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 136/302 (45%), Gaps = 3/302 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E F +M G++ + F L+D ++ V KA + +R + + PD +
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC--FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
L+ Q + R +V EMK E +PD ++ G L+ A C A + + A Y +
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ + +P +++ +N D A Y+ K P+ ++A++ + +D
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
+A+ ++ + K G+ + +Y ++ A+ ++A ++ ++ S + PT+ST + +
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS-IKLRPTISTMNAL 755
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ C+ +L M D+++ G+ P + +L+ A + + + K Q G+
Sbjct: 756 ITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Query: 468 RP 469
P
Sbjct: 816 SP 817
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQ 136
+++ VE + +++ + AG +A +F + + K K F+ALI A G+
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 137 FKVIWNLVEDMK-QRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLK--PEVS 191
++++ +MK + + D + +V+ A E ++ + KYG++ PEV
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV- 646
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
+ V+ KS + A ++ M+ + + PD ++ L++ + L + ++
Sbjct: 647 -YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
K + ++Y L+ A C AK + +A+ Y +++ + P+ + LI L +L
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD---AYRVVDEMKQCGVGPN 364
+A+E+ ++ K G P T TY+ ++ A S R DD +++++ + K GV PN
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLA---SERKDDFEVSFKLLSQAKGDGVSPN 818
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A + ++M K G++PE S + KL+ C+ +V KA+E F+ + + +VPDL +YTI
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + + + +MK +PDVVTY +L+N+ D + EM+ +
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFD 693
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P ++ +IN L + ++ K P+ TY + ++
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL-------LKNKPER 746
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
+ EMK V P+ Y +++ K EA +F +M E G +P + Y ++
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM-IESGVDPDAAPYTALIAC 805
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
C L ++D+M G+ P + + LI+ C + A K ++ML+ GI+P
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 471 ANLFSTLKQALIDA 484
S + A + A
Sbjct: 866 KASLSAVHYAKLKA 879
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 8/289 (2%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+ K+V LC +E A+ + M G+ PD+ Y+ ++EG + N+ + +V +M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ + V ++ YC+ + EA + E +E N+ ++ + LG +++
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
EA+E + + G AP+ Y ++G C + DA+ ++ EM G P+ Y+++
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
L QEA+ + M + G +PT T+++++ D LD A ++ + +
Sbjct: 474 GGLATNGLAQEAFETLKMMENR-GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
++ C A LD A F++ + + P +++ TL +L
Sbjct: 533 ENDAS----MVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSL 574
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 29/310 (9%)
Query: 200 LCKSKS-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
LC K + KAQ+L D+M G+ P+ Y L+ W + N+ + E + + P
Sbjct: 574 LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+ TY I+IN YC+ + +A + +M+ +++ P +S L+N SD LD E
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN---SDPELDMKRE-- 688
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
+A P+ Y ++ YC + Y + +MK+ + P+ TY ++L + +
Sbjct: 689 --MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE- 745
Query: 379 RTTQEAYSVFRRMSSEM---GCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
R +S EM +P V Y +++ C L ++DQM G+ P
Sbjct: 746 ----------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFAL 495
+ LI+ C L A F +M++ G++P ++ L G F L
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG-------FVL 848
Query: 496 KIDKLRKTPL 505
K KL K L
Sbjct: 849 KAVKLVKEML 858
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 152/366 (41%), Gaps = 37/366 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV+EA+E F +M G+ P+V ++ L+ C A +L +M G PD+ Y
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L G + E + M+ +P VT+ ++I A + D+A FY ++ K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 290 NM---------------------------MPSPH-IFSTLINGLGSDKR-LDEALEFYEK 320
+ P P ++ TL L ++K + +A + ++
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
G PE Y ++GA+C + A + + + P+ TY I+++ +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
++AY++F M +P V TY ++L + LDM+ +M A ++P + +
Sbjct: 651 PKQAYALFEDMKRR-DVKPDVVTYSVLLN---SDPELDMKR----EMEAFDVIPDVVYYT 702
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKL 500
++I+ CH N L F+ M I P ++ L + + + F +K D
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVF 762
Query: 501 RKTPLV 506
T L+
Sbjct: 763 YYTVLI 768
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 142/312 (45%), Gaps = 9/312 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A MEK+G+ P+V ++ +++ K+ ++ KA ++F+KM + + +
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + Q N ++ +E + D V Y + +A K K +EA+ + EM K
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++TLI G + +A + + G P+ YN + G + +A
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ + M+ GV P T+++++ LI A +A + + + + E S +++
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK-SRENDAS----MVK 540
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC-HANKLDAACKYFQQMLDVGIR 468
FC LD + +R LP V+F L ++LC + + A +M +G+
Sbjct: 541 GFCAAGCLDHAFERF--IRLEFPLPK-SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 469 PPANLFSTLKQA 480
P +++ L A
Sbjct: 598 PEKSMYGKLIGA 609
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 127/336 (37%), Gaps = 30/336 (8%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV+ F KM K + + ++ C+ + +A +LF + R + D Y +
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + + E+ REM + PDV+ Y LI C K +A EM
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P I++ L GL ++ EA E + + G P T+N V+ + +D A
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 351 RVVDEMKQ-------------CGVG----------------PNSRTYDIILHHLIKARTT 381
+ ++ C G P S + + +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
+A + RM ++G EP S Y ++ +C + ++ + + I+P + + +
Sbjct: 582 SKAQDLLDRM-WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+I+ C N+ A F+ M ++P +S L
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL 676
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F++M + G+ P+ + + L+ CK +++A+ +FD+M G+ PD+ YT L+
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
G + +L+ ++ +EM + +P + + A KAK
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAK 880
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 29/326 (8%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV-NE 246
P + FN LV CK K VE+A E+ KM G+ PD +Y + + Q+ +R +E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 247 VCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
V +M E +P+ T GI++ YC+ + + + F M+E + + +F++LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 306 -------GSDK--------RLDEALEFY--EKFKAN--------GFAPETPTYNAVVGAY 340
G D+ +E +E +K K + TY+ V+ A+
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
+ M+ A +V EM + GV P++ Y I+ ++A+ ++A + + E P
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE--SRPN 423
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
V + ++ +C +D M V+++M G+ P + F L+ + A + Q
Sbjct: 424 VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 483
Query: 461 QMLDVGIRPPANLFSTLKQALIDAGM 486
M G++P + F L +A AG+
Sbjct: 484 MMRGCGVKPENSTFLLLAEAWRVAGL 509
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 4/269 (1%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V KL++VL + +AQ +F + G P L SYT LL + Q+ ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
E++ + D + + +INA+ ++ ++AV +M+E + P+ ++TLI G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 310 RLDEALEFYEKFKANG---FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+ + + E + G P T+N +V A+C ++++A+ VV +M++CGV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 367 TYDIILH-HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
TY+ I ++ K T + V +M + +P T I++ +C E R+ +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDA 454
+M+ + + VF LI+ D
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 34/319 (10%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++E+ G K + FN +++ +S ++E A + KM+ GL P +Y L++G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 240 NLLRVNEVCREMKCEC---FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
R +E+ M E P++ T+ +L+ A+CK KK +EA +M+E + P
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 297 IFSTLIN-------GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++T+ + ++ + E + EK K NG T VVG YC R+ D
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG-----RTCGIVVGGYCREGRVRDG 279
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R V MK+ V N ++ +++ ++ V T ++L
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV---------------TLTLLLM 324
Query: 410 LFCDEERL----DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
F +E L M++ V M+ + + + +++A A ++ A + F++M+
Sbjct: 325 SFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 384
Query: 466 GIRPPANLFSTLKQALIDA 484
G++P A+ +S L + + A
Sbjct: 385 GVKPDAHAYSILAKGYVRA 403
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 32/311 (10%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK---VKEAVETFE 179
+F+ L++A K ++ + W +V+ M++ + DT K V+ E E
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP-DTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 180 KM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
KM K KP +V C+ V +M+ + +L + L+ G+ +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 239 QNLLRVNEVC-----------------REMKC-------EC-FEPDVVTYGILINAYCKA 273
+ ++EV ++MK EC + DV+TY ++NA+ A
Sbjct: 309 MDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSA 368
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
++A + EM + + P H +S L G K +A E E P +
Sbjct: 369 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIF 427
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
V+ +C + MDDA RV ++M + GV PN +T++ ++ ++ + +A V + M
Sbjct: 428 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 487
Query: 394 EMGCEPTVSTY 404
G +P ST+
Sbjct: 488 -CGVKPENSTF 497
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K V+ M++ +K +V ++ +++ + +EKA ++F +M G+ PD +Y+IL
Sbjct: 337 KMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 396
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+G+ + + + E+ + E P+VV + +I+ +C D+A+ +++M + +
Sbjct: 397 AKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 455
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ F TL+ G K+ +A E + + G PE T+ + A+ + D++ +
Sbjct: 456 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 515
Query: 352 VVDEMK 357
++ +K
Sbjct: 516 AINALK 521
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
FN+ V+++ K K Q + M+ + D+ +Y+ ++ WS + + +V +EM
Sbjct: 325 SFNEEVELVGNQKM--KVQ-VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM---PSPHIFSTLINGLGSD 308
+PD Y IL Y +AK+ +A E+ E ++ P+ IF+T+I+G S+
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLETLIVESRPNVVIFTTVISGWCSN 437
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+D+A+ + K G +P T+ ++ Y + A V+ M+ CGV P + T+
Sbjct: 438 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Query: 369 DIILHHLIKARTTQEA 384
++ A T E+
Sbjct: 498 LLLAEAWRVAGLTDES 513
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ L+N L R EA ++ G P +Y ++ A + +V E++Q
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
G +S ++ +++ ++ ++A +M E+G PT STY+ +++ + + +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK-ELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 419 MEMAVWDQMRARG---ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFS 475
+ D M G + P + F VL+ A C K++ A + ++M + G+RP ++
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 476 TLKQALIDAG 485
T+ + G
Sbjct: 228 TIATCYVQKG 237
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 35/428 (8%)
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQK-GFKHS 120
+ K LS+S ++DA S+ +S +V ++L + S L FF W + G+KHS
Sbjct: 36 LSKTLSQSGTRSLDAN----SIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHS 91
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFE 179
++ + + + + +L+ MK+ + L + K + A+ +
Sbjct: 92 ATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 180 KMEKYG--LKPEVSDFNKLVDVLCKS----------KSVEKAQELFDKMRHRGLV----P 223
ME+ G L P V D + L+ ++ K K +E + D R ++ P
Sbjct: 152 YMEELGDCLNPSVYD-SVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLP 210
Query: 224 DLKSYTILLEGWSQ---QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
+ LL G + + RV E + MK F+ D +Y I I+ + D A+
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR--FKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 281 GFYHEMQEKNMM------PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ EM+E++ + P +++LI+ L + +AL +++ K +G P+ TY
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYR 328
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
++ C S RMDDA R+ EM+ G P++ Y+ +L +KAR EA +F +M E
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 395 MGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDA 454
G + TY+I++ R + ++ ++ +G F ++ LC KL+
Sbjct: 389 -GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEG 447
Query: 455 ACKYFQQM 462
A K ++M
Sbjct: 448 AVKLVEEM 455
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPELVA--EVLNKLSNAGVLALSFFHWAEKQKG---FK 118
K+L S N + D + V P VA E+L L A + + F EK KG FK
Sbjct: 187 KLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRS-EFKRVFEKLKGMKRFK 245
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
T S++ I G +L ++MK+R +
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSV------------------------- 280
Query: 179 EKMEKYG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
YG P++ +N L+ VLC + A ++D+++ G PD +Y IL++G
Sbjct: 281 -----YGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC 335
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ + + EM+ F PD + Y L++ KA+K EA + +M ++ + S
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ LI+GL + R + + K G + T++ V C +++ A ++V+EM
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 357 KQCG 360
+ G
Sbjct: 456 ETRG 459
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI--LLEGWSQQQNLLRVNE 246
+V N + + + A +LF+ G V DL SYT ++ + ++
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG-VTDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
V +M D+ TY ++I K + D A + ++ +++TLIN LG
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
RLDEA + ++ K+NG P+ +YN ++ + ++ +AY+ + M G PN
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 367 TYDIILHHLIK 377
T D IL +L K
Sbjct: 772 T-DTILDYLGK 781
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 154/393 (39%), Gaps = 48/393 (12%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVK 172
Q+G + S +++ LI+ L + + + + L D+K++ + + T K++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
AV+ E+ME G ++ + L+ K + ++L +R LVP++ + +
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG----------- 281
E ++ + K + + P + G ++ D+
Sbjct: 507 EASLKRP----------QSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDP 556
Query: 282 -----FYHEMQEKNMMPSP-------------------HIFSTLINGLGSDKRLDEALEF 317
+ ++ + P P + +T ++ S L A +
Sbjct: 557 WSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKL 616
Query: 318 YEKFKANGFAPETP-TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+E F G T TYN+++ ++ A V+D+M + + TY++I+ L
Sbjct: 617 FEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLG 676
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K A +V R++ + G V Y+ ++ RLD ++D M++ GI P +
Sbjct: 677 KMGRADLASAVLDRLTKQGGYLDIV-MYNTLINALGKATRLDEATQLFDHMKSNGINPDV 735
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ +I A KL A KY + MLD G P
Sbjct: 736 VSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 144/384 (37%), Gaps = 76/384 (19%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVD------------------------------- 198
KV EA + FEKM + G++ +N L+D
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 199 ----VLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCE 254
LC+ +E A +L ++M RG DL + + LL G+ +Q ++ + ++
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREG 493
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
P+V+ + + A K + + M PS F +++ +GS+ A
Sbjct: 494 NLVPNVLRWNAGVEASLKRPQS-------KDKDYTPMFPSKGSFLDIMSMVGSEDDGASA 546
Query: 315 LEFY--------------------------------EKFKANGFAPETPTYNAVVGAYCW 342
E ++ +A + + N + Y
Sbjct: 547 EEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLS 606
Query: 343 SMRMDDAYRVVDEMKQCGVGP-NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
+ A ++ + GV S TY+ ++ +K Q A V +M C +
Sbjct: 607 KGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENF-CAADI 665
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
+TY++I++ R D+ AV D++ +G + ++ LI+AL A +LD A + F
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 462 MLDVGIRPPANLFSTLKQALIDAG 485
M GI P ++T+ + AG
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAG 749
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
TY +++++ K + A G +M E ++ +I GLG R D A ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
G + YN ++ A + R+D+A ++ D MK G+ P+ +Y+ ++ KA
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+EAY + M + GC P T D IL
Sbjct: 752 KEAYKYLKAM-LDAGCLPNHVT-DTIL 776
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 23/275 (8%)
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
L V ++ MK + D IL+++ ++ K++ A+G M+E +P ++ +
Sbjct: 108 LGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDS 167
Query: 301 LINGLGSDKRLDEALE-FYEKFKAN--------------GFAPETPTYNAV-VGAYCWSM 344
++ L L AL ++ +A+ + P T N + VG M
Sbjct: 168 VLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADM 227
Query: 345 RMDDAYRVVDEMKQCG-VGPNSRTYDIILHHLIKARTTQEAYSVFRRM---SSEMGCE-- 398
R + RV +++K ++ +Y+I +H A S+F+ M SS G
Sbjct: 228 R-SEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFG 286
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
P + TY+ ++ + C + + VWD+++ G P + +LI C + ++D A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 459 FQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ +M G P +++ L + A T A
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 170/389 (43%), Gaps = 33/389 (8%)
Query: 16 SNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPH----ADKICKILSKSPN 71
SNL Y +S+ P ++ +P+ + L + L+P + + D IC L+ S
Sbjct: 6 SNLRFFSSYSSSIVPRCSN----IPKPILNPL--YNLLPQSQNPSKIVDVICSTLNHSDY 59
Query: 72 STIDAALADLSVEVSPEL----VAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHAL 127
S + L D + P L ++ VL + + A++FF W + G + + ++ L
Sbjct: 60 SVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLL 119
Query: 128 IEALGKIRQFKVIWNLV----------EDMKQRKLLTRDTXXXXXXXXXXXXKVK----- 172
+ L ++F + + E++ ++L T VK
Sbjct: 120 LHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKL 179
Query: 173 ----EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
E F ++ G V N L++ L K +E +++ M G+ P+ ++
Sbjct: 180 GLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTF 239
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
IL + N V++ +M+ E FEPD+VTY L+++YC+ + EA Y M
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ ++P +++LI GL D R+ EA + + + G P+ +YN ++ AYC M
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ +++ EM V P+ T +I+ ++
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 139/324 (42%), Gaps = 22/324 (6%)
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH--RGLVPDLKSYTILLEGWSQQQNL 241
Y L P+ + +K+VDV+C + + L +R + L+P L I Q +
Sbjct: 34 YNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDA 93
Query: 242 LRVNEVCREMKCECFE-PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP------- 293
R + +K + + P+V Y +L++ +KK+ A+ F E+ E
Sbjct: 94 SRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFR 153
Query: 294 -----------SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
P +F L+ G ++E + + +GF+ T N ++
Sbjct: 154 VLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLK 213
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
M+D ++V M + G+ PN+ T++I+ + +E +M E G EP +
Sbjct: 214 LDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEE-GFEPDLV 272
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
TY+ ++ +C RL ++ M R ++P + + LI LC ++ A + F +M
Sbjct: 273 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 332
Query: 463 LDVGIRPPANLFSTLKQALIDAGM 486
+D GI+P ++TL A GM
Sbjct: 333 VDRGIKPDCMSYNTLIYAYCKEGM 356
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 124/302 (41%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ + M + G+ P FN L +V C + + + +KM G PDL +Y L+ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ L + + M PD+VTY LI CK + EA +H M ++ + P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++TLI + + ++ + + N P+ T +V + R+ A V E
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 356 MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEE 415
+++ V D ++ L + A + R+ E G E TY+ ++ +
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 416 RLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFS 475
++ + + +++ + + + LI LC + A +M D ++P + +
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Query: 476 TL 477
L
Sbjct: 522 AL 523
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 21/341 (6%)
Query: 177 TFEKMEKY--GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH-----------RGLVP 223
TF K K+ G +P V ++ L+ +L SK A + ++ R LV
Sbjct: 98 TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157
Query: 224 -------DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
D + +L++G+ + + V RE+ F VVT L+N K
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
++ Y M + P+ + F+ L N +D E +F EK + GF P+ TYN +
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
V +YC R+ +A+ + M + V P+ TY ++ L K +EA+ F RM + G
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM-VDRG 336
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
+P +Y+ ++ +C E + + +M ++P V++ +L +A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 457 KYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
+ ++ + + P + L +L G A H +I
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 43/290 (14%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXXXXXKV 171
G +T +F+ L F+ + + +E M++ L+T +T ++
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG---RL 287
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA ++ M + + P++ + L+ LCK V +A + F +M RG+ PD SY L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM----- 286
+ + ++ + + ++ EM PD T +++ + + + AV F E+
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 287 -------------------------------QEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+E+ P ++ LI L ++EAL
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
K K + TY A++G C R +A ++ EM V P+S
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/487 (19%), Positives = 198/487 (40%), Gaps = 81/487 (16%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L++++L K N V AL F A E+ + H+ + +I+ LGK + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 144 VEDMKQRKLLTRDTXXXXXXXX-XXXXKVKEAVETFEKMEK------------------- 183
+E MK+ +D+ ++++A+ F+ + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 184 ---------------YG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
YG + ++ N L+ VLC+ + A ++F +M ++G PD
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFE----PDVVTYGILINAYCKAKKYDEAVGF 282
SY IL++G+ + L + M + D+V Y IL++A C A + D+A+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 283 ---------------YHEMQE----------------------KNMMPSPHIFSTLINGL 305
YH ++ + +P +S + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPN 364
+ +L E E ++ GF P Y A V A C + ++ +A V++ EM Q P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
Y++++ L + EA ++MS ++ C TY ++ C + + V
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
++M + PG+ + ++I LC ++ A + ++M+ + P ++++ L +++
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFC 488
Query: 485 GMETTAI 491
++ I
Sbjct: 489 AIDVVEI 495
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/487 (19%), Positives = 198/487 (40%), Gaps = 81/487 (16%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L++++L K N V AL F A E+ + H+ + +I+ LGK + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 144 VEDMKQRKLLTRDTXXXXXXXX-XXXXKVKEAVETFEKMEK------------------- 183
+E MK+ +D+ ++++A+ F+ + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 184 ---------------YG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
YG + ++ N L+ VLC+ + A ++F +M ++G PD
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFE----PDVVTYGILINAYCKAKKYDEAVGF 282
SY IL++G+ + L + M + D+V Y IL++A C A + D+A+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 283 ---------------YHEMQE----------------------KNMMPSPHIFSTLINGL 305
YH ++ + +P +S + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPN 364
+ +L E E ++ GF P Y A V A C + ++ +A V++ EM Q P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
Y++++ L + EA ++MS ++ C TY ++ C + + V
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
++M + PG+ + ++I LC ++ A + ++M+ + P ++++ L +++
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFC 488
Query: 485 GMETTAI 491
++ I
Sbjct: 489 AIDVVEI 495
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 172/353 (48%), Gaps = 11/353 (3%)
Query: 106 SFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXX 164
+FF+W + + F T ++ +++L RQF++I + +M + + L T
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
+A+E FE+M K GL P+ ++ ++DV KS VE+ L+++ G PD
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
++++L + + + + + V +EMK +P+VV Y L+ A +A K A ++
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM E + P+ + L+ G + +AL+ +E+ KA + + YN ++ C +
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADI 409
Query: 345 RM-DDAYRVVDEMK---QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
+ ++A R+ ++MK QC P++ +Y +L+ ++A +F M + G +
Sbjct: 410 GLEEEAERLFNDMKESVQC--RPDNFSYTAMLNIYGSGGKAEKAMELFEEM-LKAGVQVN 466
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS--ALCHANK 451
V +++ +R+D + V+D RG+ P + L+S ALC +++
Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSE 519
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++M+ +KP V +N L++ + ++ A+ LF++M GL P+ K+ T L++ + +
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGK 373
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPH 296
+ ++ EMK + + D + Y L+N +EA +++M+E P
Sbjct: 374 ARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNF 433
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ ++N GS + ++A+E +E+ G +V + R+DD V D
Sbjct: 434 SYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLS 493
Query: 357 KQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
+ GV P+ R +L + ++++A V
Sbjct: 494 IKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE---- 233
F +M + GL P LV + K++ A +L+++M+ + D Y LL
Sbjct: 349 FNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCAD 408
Query: 234 -GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ L N++ ++C PD +Y ++N Y K ++A+ + EM + +
Sbjct: 409 IGLEEEAERL-FNDMKESVQCR---PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ + L+ LG KR+D+ + ++ G P+ ++ +DA +V
Sbjct: 465 VNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Query: 353 V 353
+
Sbjct: 525 M 525
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 196/427 (45%), Gaps = 15/427 (3%)
Query: 48 RIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+I + I DK+ +L P++ A+ DL + VS +L LNK ++ +L
Sbjct: 91 KILSFIQKETDPDKVADVLGALPST--HASWDDL-INVSVQLR---LNKKWDSIILVC-- 142
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL-VEDMKQRKLLTRDTXXXXXXXXX 166
W ++ F+ F+ LI+A G+ Q+K +L V+ ++ R + T DT
Sbjct: 143 -EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201
Query: 167 XXXKVKEAVETFEKMEKYGLKPE---VSDFNKLVDVLCKSK-SVEKAQELFDKMRHRGLV 222
++ A +M+ + + P+ V+ +N ++ L K K + E+A ++F +M+
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P ++Y +++ + + ++ EM+ +P++ TY L+NA+ + ++A
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++QE + P ++++ L+ A E + + G P+ +YN +V AY
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ DA V +EMK+ G+ P +++ ++L KAR + ++ + M SE G EP
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTF 440
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ +L L+ + + +M + + +LI+ A L+ + F ++
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 463 LDVGIRP 469
+ RP
Sbjct: 501 KEKNFRP 507
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F M+ G +P+ + +N +VD ++ A+ +F++M+ G+ P +KS+ +LL
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ +++ + + +EM EPD ++N Y + ++ + EM+
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LIN G L+ E + + K F P+ T+ + +GAY V
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+EM G P+ T ++L ++ SV R M
Sbjct: 533 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 1/283 (0%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + KP + + LV+ + EKA+E+F++++ GL PD+ Y L+E +S+
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
E+ M+ EPD +Y I+++AY +A + +A + EM+ + P+
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L++ + + + ++ NG P+T N+++ Y + +++ EM+
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
+ TY+I+++ KA + +F + E P V T+ + + ++
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ V+++M G P VL+SA +++ + M
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F+PDV+ + +LI+AY + +Y EA Y ++ E +P+ ++ LI ++ A
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 316 EFYEKFKANGFAPET---PTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+ + + +P+T YNA + G ++A V MK+ P + TY+++
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
++ KA + ++ ++ M S C+P + TY ++ F E + +++Q++ G
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+ P ++V+ L+ + A A + F M +G P ++ + A AG+ + A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+++ + P F+ LI+ G + EA Y + + + P TY ++ AYC +
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 346 MDDAYRVVDEMKQCGVGPNS---RTYDIILHHLIKAR-TTQEAYSVFRRMSSEMGCEPTV 401
++ A V+ EM+ V P + Y+ + L+K + T+EA VF+RM + C+PT
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR-CKPTT 264
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
TY++++ L+ + M ++ +MR+ P + + L++A + A + F+Q
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 462 MLDVGIRPPANLFSTLKQALIDAG 485
+ + G+ P +++ L ++ AG
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAG 348
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 196/427 (45%), Gaps = 15/427 (3%)
Query: 48 RIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+I + I DK+ +L P++ A+ DL + VS +L LNK ++ +L
Sbjct: 113 KILSFIQKETDPDKVADVLGALPST--HASWDDL-INVSVQLR---LNKKWDSIILVC-- 164
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL-VEDMKQRKLLTRDTXXXXXXXXX 166
W ++ F+ F+ LI+A G+ Q+K +L V+ ++ R + T DT
Sbjct: 165 -EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 223
Query: 167 XXXKVKEAVETFEKMEKYGLKPE---VSDFNKLVDVLCKSK-SVEKAQELFDKMRHRGLV 222
++ A +M+ + + P+ V+ +N ++ L K K + E+A ++F +M+
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P ++Y +++ + + ++ EM+ +P++ TY L+NA+ + ++A
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++QE + P ++++ L+ A E + + G P+ +YN +V AY
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ DA V +EMK+ G+ P +++ ++L KAR + ++ + M SE G EP
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SENGVEPDTF 462
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ +L L+ + + +M + + +LI+ A L+ + F ++
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 463 LDVGIRP 469
+ RP
Sbjct: 523 KEKNFRP 529
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F M+ G +P+ + +N +VD ++ A+ +F++M+ G+ P +KS+ +LL
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ +++ + + +EM EPD ++N Y + ++ + EM+
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LIN G L+ E + + K F P+ T+ + +GAY V
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+EM G P+ T ++L ++ SV R M
Sbjct: 555 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 1/283 (0%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + KP + + LV+ + EKA+E+F++++ GL PD+ Y L+E +S+
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
E+ M+ EPD +Y I+++AY +A + +A + EM+ + P+
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L++ + + + ++ NG P+T N+++ Y + +++ EM+
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
+ TY+I+++ KA + +F + E P V T+ + + ++
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ V+++M G P VL+SA +++ + M
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F+PDV+ + +LI+AY + +Y EA Y ++ E +P+ ++ LI ++ A
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 232
Query: 316 EFYEKFKANGFAPET---PTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+ + + +P+T YNA + G ++A V MK+ P + TY+++
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
++ KA + ++ ++ M S C+P + TY ++ F E + +++Q++ G
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+ P ++V+ L+ + A A + F M +G P ++ + A AG+ + A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+++ + P F+ LI+ G + EA Y + + + P TY ++ AYC +
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 346 MDDAYRVVDEMKQCGVGPNS---RTYDIILHHLIKAR-TTQEAYSVFRRMSSEMGCEPTV 401
++ A V+ EM+ V P + Y+ + L+K + T+EA VF+RM + C+PT
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR-CKPTT 286
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQ 461
TY++++ L+ + M ++ +MR+ P + + L++A + A + F+Q
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 462 MLDVGIRPPANLFSTLKQALIDAG 485
+ + G+ P +++ L ++ AG
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAG 370
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 154/358 (43%), Gaps = 28/358 (7%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHAL--------------------IEALGKIRQFKVIWNL 143
ALSF W + FKH+ S+ +L I++ +R + +
Sbjct: 43 ALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDF 102
Query: 144 VEDMKQ------RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLV 197
M++ + LT V+E + +M + + P++ FN LV
Sbjct: 103 CRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
+ CK V +A++ + G PD +YT + G +++ + +V +EM
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
+ V+Y LI +AKK DEA+ +M++ N P+ ++ LI+ L + EA+
Sbjct: 223 RNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+++ +G P+ Y ++ ++C +D+A +++ M + G+ PN TY+ ++ K
Sbjct: 283 FKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ +A + +M E P + TY+ ++ C LD + M G++P
Sbjct: 343 -KNVHKAMGLLSKM-LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V A + F++M + G + +L+ L ++K +++A L KM+ P++++YT
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++ + ++M +PD Y +LI ++C DEA G M E
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+MP+ ++ LI G K + +A+ K P+ TYN ++ C S +D A
Sbjct: 325 GLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 350 YRVVDEMKQCGVGPNSRT 367
YR++ M++ G+ PN RT
Sbjct: 384 YRLLSLMEESGLVPNQRT 401
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 41/257 (15%)
Query: 230 ILLEGWSQQQNLLRVNEVCREM-KCECFEPDVV----TYGILINAYCKAKKYDEAVGFYH 284
++++ + ++ L V + CR M K + FE Y L+++ + +E Y
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT 144
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM E + P + F+TL+NG + EA ++ G P+ TY + + +C
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTY 404
+D A++V EM Q G N +Y +++ L +A+ EA S+ +M + C
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC------- 257
Query: 405 DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD 464
P + + VLI ALC + + A F+QM +
Sbjct: 258 -----------------------------PNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 465 VGIRPPANLFSTLKQAL 481
GI+P +++ L Q+
Sbjct: 289 SGIKPDDCMYTVLIQSF 305
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 141/319 (44%), Gaps = 19/319 (5%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL--------FDKMRHRGLV 222
V+EA+E + ++ G+ V N ++ K++ +++ EL FD R R L+
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLI 220
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
L + EG+ E+ ++ + +P Y LI+ +C+ Y
Sbjct: 221 RALCDGGDVSEGY----------ELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV 270
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
H M N PS +I+ +I GL +K+ EA ++ K G+AP+ Y ++ +C
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ A ++ EM + G+ PN Y++++H K + + M G T+
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN-GYGGTML 389
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ + +++ FC + D ++ M G+ P + LI C NK++ K ++++
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 463 LDVGIRPPANLFSTLKQAL 481
+G++P ++ L + L
Sbjct: 450 KALGLKPSGMAYAALVRNL 468
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 139/325 (42%), Gaps = 5/325 (1%)
Query: 87 PELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P L+ + + LS G++ A+ ++ K G S + ++++ K R+ W L
Sbjct: 145 PTLLEQYVKCLSEEGLVEEAIEVYN-VLKDMGISSSVVTCNSVLLGCLKARKLDRFWELH 203
Query: 145 EDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
++M + + + V E E ++ K GL P + KL+ C+
Sbjct: 204 KEMVESEF-DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG 262
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
+ E+ M P + Y +++G + L + + +K + + PD V Y
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
+I +C+ A + EM +K M P+ ++ +I+G + FY + N
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
G+ + N ++ +C + D+A+ + M + GV PN+ TY+ ++ K ++
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILR 409
+++ + + +G +P+ Y ++R
Sbjct: 443 LKLYKELKA-LGLKPSGMAYAALVR 466
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 114/324 (35%), Gaps = 12/324 (3%)
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD---LKSYTILLEGWSQQQN 240
Y P N L L K+V+ A+ D G P+ L+ Y L +
Sbjct: 107 YDYTPGPVSLNILFGALLDGKAVKAAKSFLDTT---GFKPEPTLLEQYVKCLSEEGLVEE 163
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ V V ++M VVT ++ KA+K D + EM E
Sbjct: 164 AIEVYNVLKDMG---ISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRC 218
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI L + E E ++ G P Y ++ +C V+ M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
P+ Y I+ L + EAY +F+ + + G P Y ++R FC++ L
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDK-GYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+W +M +G+ P + V+I ++ ++ +ML G +T+ +
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 481 LIDAGMETTAIHFALKIDKLRKTP 504
G A + + TP
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTP 421
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 8/324 (2%)
Query: 176 ETFEKMEKYGLKPEVS---DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+ FE E L V+ + ++D LC+ + A + M+ +GL P SY ++
Sbjct: 290 DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAII 349
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + +R ++ E F P TY +L+ + CK +A M K
Sbjct: 350 HGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGA 409
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
I++ + GL E L P+ T N V+ C R+DDA +V
Sbjct: 410 DRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKV 469
Query: 353 VDEM---KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+D+M K C P++ T + ++ L+ +EA V R+ E +P V Y+ ++R
Sbjct: 470 LDDMMTGKFCA--PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIR 527
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ D M+V+ Q+ + + ++I LC NK+D A K++ ++ R
Sbjct: 528 GLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRH 587
Query: 470 PANLFSTLKQALIDAGMETTAIHF 493
A +++ + L +G + A HF
Sbjct: 588 DAFVYAAFLKGLCQSGYLSDACHF 611
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 11/330 (3%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M+ GLKP + +N ++ LCK +A +L ++ P +Y +L+E ++ +
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ V M + Y I + C E + M + + P + +T
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 301 LINGLGSDKRLDEALEFYEKFKANGF-APETPTYNAVVGAYCWSMRMDDAYRVVDE-MKQ 358
+INGL R+D+A++ + F AP+ T N V+ R ++A V++ M +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLD 418
+ P Y+ ++ L K EA SVF ++ + +TY II+ C ++D
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE-KASVTADSTTYAIIIDGLCVTNKVD 571
Query: 419 MEMAVWDQMRARGILP-GMHVFFV---LISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
M WD + I P G H FV + LC + L AC + + D G P +
Sbjct: 572 MAKKFWDDV----IWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 475 STLKQALIDAGMETTAIHFALKIDKLRKTP 504
+T+ +G++ A ++ K + P
Sbjct: 628 NTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 24/312 (7%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P ++++N+L++ LC V A +L MR+RG +PD+ ++T L+ G+ + + L ++V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-----QEKNMMPSPHIFSTLI 302
EM+ P+ +T +LI + K + + E+ E + F+ L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
+ + + ++ E E Y ++ + C R A R+V MK G+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
P +Y+ I+H L K AY + SE P+ TY +++ C E
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEE-GSEFEFFPSEYTYKLLMESLCKE-------- 390
Query: 423 VWDQMRARGILPGM---------HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
D +AR +L M ++ + + LC + ML RP
Sbjct: 391 -LDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYT 449
Query: 474 FSTLKQALIDAG 485
+T+ L G
Sbjct: 450 LNTVINGLCKMG 461
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 15/332 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A + M G P+V F L+ C+ + +E A ++FD+MR G+ P+ + +
Sbjct: 177 RVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLS 236
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFE---------PDVVTYGILINAYCKAKKYDEAV 280
+L+ G+ + +++ E R++ E +E + L+++ C+ +++
Sbjct: 237 VLIGGFLKMRDV----ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIF 292
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
M + + +I+ L +R A K+ G P +YNA++
Sbjct: 293 EIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
C AY++++E + P+ TY +++ L K T +A +V M + G + T
Sbjct: 353 CKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT 412
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
Y+I LR C + + V M P + +I+ LC ++D A K
Sbjct: 413 -RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 461 QMLDVGI-RPPANLFSTLKQALIDAGMETTAI 491
M+ P A +T+ L+ G A+
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 106/243 (43%), Gaps = 9/243 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTIL 231
E + M + +P+ N +++ LCK V+ A ++ D M + PD + +
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 232 LEGWSQQ----QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+ G Q + L +N V E K +P VV Y +I K K DEA+ + +++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENK---IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE 546
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ ++ ++ +I+GL ++D A +F++ + Y A + C S +
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLS 606
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
DA + ++ G PN Y+ ++ ++ +EAY + M G P T+ I+
Sbjct: 607 DACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN-GQAPDAVTWRIL 665
Query: 408 LRL 410
+L
Sbjct: 666 DKL 668
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/320 (18%), Positives = 129/320 (40%), Gaps = 43/320 (13%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ + + G +P+ + + ++ LC + ++A F G +PD ++ +++
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
++ V T G++ +GF +K +
Sbjct: 133 ARLLYSRS------------------PVSTLGVI----------HRLIGF-----KKEFV 159
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
PS ++ L+N L + R+ +A + + G P+ T+ ++G YC ++ A++V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRR----MSSEMGCEPTVSTYDIIL 408
DEM+ CG+ PNS T +++ +K R + + + M +E + + ++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFV---LISALCHANKLDAACKYFQQMLDV 465
C E + + + M + ++V F +I +LC + A + M
Sbjct: 280 DSMCREGYFNDIFEIAENM---SLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 466 GIRPPANLFSTLKQALIDAG 485
G++P ++ + L G
Sbjct: 337 GLKPRRTSYNAIIHGLCKDG 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 170 KVKEAVETFEKMEKYGL-KPEVSDFNKLVDVLCKSKSVEKAQELFDK-MRHRGLVPDLKS 227
+V +A++ + M P+ N ++ L E+A ++ ++ M + P + +
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y ++ G + V +++ D TY I+I+ C K D A F+ ++
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ +++ + GL L +A F +G P YN V+ S
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 348 DAYRVVDEMKQCGVGPNSRTYDII 371
+AY++++EM++ G P++ T+ I+
Sbjct: 642 EAYQILEEMRKNGQAPDAVTWRIL 665
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ K G + +V ++N ++ K+K EKA LF M+++G PD +Y L + +
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + EM +P TY +I +Y + +AV Y M++ + P+ +
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ +LING ++EA++++ + +G +++ AY +++A RV D+MK
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
GP+ + +L EA S+F + + C+ V ++ ++ L+ L
Sbjct: 683 DSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCD--VISFATMMYLYKGMGML 740
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
D + V ++MR G+L F +++ +L C+ F +ML
Sbjct: 741 DEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 152/366 (41%), Gaps = 2/366 (0%)
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFE 179
T +F+ LI+ GK + NL +M + + + T + EA +
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KME+ G+ P+ +N L+ + + +E A E + K+R GL PD ++ +L Q++
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ V V EM D + +++ Y +A + Q ++ S + +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
+ ++ FY K +G + YN ++ AY + + A + MK
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
G P+ TY+ + L EA + M + GC+P TY ++ + L
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 420 EMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQ 479
+ +++ M G+ P V+ LI+ + ++ A +YF+ M + G++ + ++L +
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 480 ALIDAG 485
A G
Sbjct: 664 AYSKVG 669
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 3/325 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A F +M K G+ + FN ++ + +A+ L KM +G+ PD K+Y
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL + ++ E R+++ PD VT+ +++ C+ K E EM
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ H ++ ++ + +A +E+F+ + T T AV+ Y +A
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAVIDVYAEKGLWVEA 498
Query: 350 YRVV-DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
V + G + Y++++ KA+ ++A S+F+ M ++ G P TY+ +
Sbjct: 499 ETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ-GTWPDECTYNSLF 557
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
++ + +D + +M G PG + +I++ L A ++ M G++
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 469 PPANLFSTLKQALIDAGMETTAIHF 493
P ++ +L ++GM AI +
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQY 642
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 140/327 (42%), Gaps = 29/327 (8%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ----QQNLLR 243
P V +N ++ L ++ ++ + + +M H G++P +Y +L++ + + ++ LL
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH---------------EMQE 288
+ + + M PD VT ++ + + ++D A F+ + +
Sbjct: 203 IKHMGQRMHF----PDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPK 258
Query: 289 KNMMPSP----HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE-TPTYNAVVGAYCWS 343
SP S + +G+ ++++L F ++ P T T+N ++ Y +
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
R++DA + EM + GV ++ T++ ++H EA S+ ++M E G P T
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM-EEKGISPDTKT 377
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
Y+I+L L D ++ + + ++R G+ P ++ LC + +M
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 464 DVGIRPPANLFSTLKQALIDAGMETTA 490
IR + + Q ++ G+ A
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQA 464
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 143/355 (40%), Gaps = 38/355 (10%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV+ +E MEK G+KP + L++ +S VE+A + F M G+ + T
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ +S+ L V +MK PDV +++ EA ++ ++EK
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 291 M--MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ S L G+G LDEA+E E+ + +G + ++N V+ Y ++ +
Sbjct: 721 TCDVISFATMMYLYKGMG---MLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 349 AYRVVDEM-KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE------------- 394
+ EM + + + T+ + L K EA S + +E
Sbjct: 778 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL 837
Query: 395 ---MG--------CEPTVS--------TYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
MG C+ S Y+ ++ + +DM + + +M+ +G+ P
Sbjct: 838 FSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPD 897
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+ L+ A ++ + ++ + P +LF ++ A + A + A
Sbjct: 898 IVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLA 952
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 21/298 (7%)
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
K T+LL+ ++ + +LRV + + + P+V+ Y I++ A +A K+DE + E
Sbjct: 113 KEQTVLLKEQTRWERVLRVFRFFQSH--QSYVPNVIHYNIVLRALGRAGKWDELRLCWIE 170
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M ++P+ + + L++ G + EAL + + P+ T VV + S
Sbjct: 171 MAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGE 230
Query: 346 MDDAYRV---------------VDEMKQCGVGP---NSRTYDIILHHLIKARTTQEAYSV 387
D A R +D+ + G N + + + + AR E
Sbjct: 231 FDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLH 290
Query: 388 FRRMSSEMGCEPTV-STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL 446
F S +P + ST++ ++ L+ RL+ ++ +M G+ F +I
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 447 CHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
L A ++M + GI P ++ L DAG A+ + KI K+ P
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 143/348 (41%), Gaps = 43/348 (12%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + +M K G+ P+ +N L+D CK + +A+ L D++ L+ ++TILL
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILL 234
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S NL + E R+M F+PDVVT+ +IN CK K E EM+E ++
Sbjct: 235 ---SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF-------------------------- 326
P+ ++TL++ L AL Y + G
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 327 ---------APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
P TY A+V C + + A ++ +M + V PN TY +++ +K
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
+EA S+ R+M + P TY ++ + +M + + +MR G+ +
Sbjct: 412 KGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+ L++ L ++ + M+ G+ +++L G
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 1/304 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++ M + G++P+++ FN +++ K E +L+DKM+ G+ P L S I++ +
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + +M P++ TY I ++ K K+ D + + + S +
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++TLI L +A +A GF P+T T+N+++ Y + A M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ G+ PN TY+ I+ L A +E M S G P TY+ ++ +
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR-GMRPDDFTYNALISGQAKIGNM 799
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
M ++ +M A G++P + VLIS + K+ A + ++M G+ P + + T+
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 478 KQAL 481
L
Sbjct: 860 ISGL 863
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 166/372 (44%), Gaps = 5/372 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEA 174
G + + AL+ L +I + K + LV+DM + + L + + A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ E+M++ G+ +V +N L+ + K V A + MR +G+ PD+ ++ I++
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNS 582
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+Q + + ++ +MK +P +++ I++ C+ K +EA+ ++M + P+
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ ++ KR D + +E + G YN ++ C A V+
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 702
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
+M+ G P++ T++ ++H ++A S + M E G P V+TY+ I+R D
Sbjct: 703 DMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVATYNTIIRGLSDA 761
Query: 415 ERLDMEMAVW-DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
L E+ W +M++RG+ P + LIS + + + +M+ G+ P +
Sbjct: 762 G-LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820
Query: 474 FSTLKQALIDAG 485
++ L + G
Sbjct: 821 YNVLISEFANVG 832
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E +ME+ + P + LVD L K+ A L+ +M RG+ DL YT
Sbjct: 274 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 333
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G + +L + + + + P+VVTY L++ CKA A +M EK
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+++P+ +S++ING L+EA+ K + P TY V+ + + + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EM+ GV N+ D +++HL + +E + + M S+ G Y ++
Sbjct: 454 IELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK-GVTLDQINYTSLID 512
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+F + +A ++M+ RG+ + + VLIS + K+ A Y + M + GI P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEP 571
Query: 470 PANLFSTLKQA 480
F+ + +
Sbjct: 572 DIATFNIMMNS 582
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 1/270 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++KM+ G+KP + N +V +LC++ +E+A + ++M + P+L +Y I L+ S+
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + + + + Y LI CK +A +M+ + +P
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F++L++G + +AL Y G +P TYN ++ + + + + + EMK
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
G+ P+ TY+ ++ K + + +++ M ++ G P STY++++ F + ++
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD-GLVPKTSTYNVLISEFANVGKM 834
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALC 447
+ +M RG+ P + +IS LC
Sbjct: 835 LQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 11/327 (3%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ KM G+ P+V N L+ CK + A L +R+R + D +Y ++ G +
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCE 173
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ EM PD V+Y LI+ +CK + A E+ E N++ +
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
S+ N L E Y +GF P+ T+++++ C ++ + ++ EM+
Sbjct: 234 LSSYYN-------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 286
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ V PN TY ++ L KA + A +++ +M G + Y +++ L
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR-GIPVDLVVYTVLMDGLFKAGDL 345
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ + +P + + L+ LC A L +A QML+ + P +S++
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 405
Query: 478 KQALIDAGMETTAIHFALKIDKLRKTP 504
+ GM A+ K++ P
Sbjct: 406 INGYVKKGMLEEAVSLLRKMEDQNVVP 432
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+T E + YG+K +N L+ LCK +KA + M RG +PD ++ L+ G+
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + M P+V TY +I A E + EM+ + M P
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++ LI+G + ++ Y + A+G P+T TYN ++ + +M A ++ E
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 356 MKQCGVGPNSRTYDIILHHLI------------KARTTQEAYSVFRRMSSEMGCEPTVST 403
M + GV PN+ TY ++ L KA EA + + M E G P T
Sbjct: 844 MGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQT 903
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 159/357 (44%), Gaps = 41/357 (11%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA +TF+ + + P V + LVD LCK+ + A+ + +M + ++P++ +Y+
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G+ ++ L + R+M+ + P+ TYG +I+ KA K + A+ EM+
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC--------- 341
+ + +I L+N L R+ E + + G + Y +++ +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 342 ------------WSM----------------RMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
W + D AY+ M++ G+ P+ T++I+++
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK---GMREKGIEPDIATFNIMMN 581
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
K ++ ++ +M S G +P++ + +I++ + C+ +++ + + +QM I
Sbjct: 582 SQRKQGDSEGILKLWDKMKS-CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIH 640
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
P + + + + + DA K + +L GI+ +++TL L GM A
Sbjct: 641 PNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 133/330 (40%), Gaps = 33/330 (10%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL-RVNEVC 248
VS F+ L + + + A M G+VPD + + L+ ++ + +V+ +
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+M PDV +LI+++CK + A+ ++ + + ++T+I+GL
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEH 174
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE------------- 355
DEA +F + G P+T +YN ++ +C A +VDE
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234
Query: 356 ---------------MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
M G P+ T+ I++ L K E + R M EM P
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM-EEMSVYPN 293
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
TY ++ +A++ QM RGI + V+ VL+ L A L A K F+
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 461 QMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+L+ P ++ L L AG ++A
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+A ME G P+ FN L+ V KA + M G+ P++ +Y +
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTI 754
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G S + V++ EMK PD TY LI+ K ++ Y EM +
Sbjct: 755 IRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGL 814
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+P ++ LI+ + ++ +A E ++ G +P T TY ++ C
Sbjct: 815 VPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G K S + ++ LI L K+ K ++ DM+ R + T V++A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ T+ M + G+ P V+ +N ++ L + +++ + +M+ RG+ PD +Y L+ G
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
++ N+ + EM + P TY +LI+ + K +A EM ++ + P+
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 295 PHIFSTLINGL 305
+ T+I+GL
Sbjct: 853 TSTYCTMISGL 863
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KE + +M+ G++P+ +N L+ K +++ + ++ +M GLVP +Y +
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC------------KAKKYDE 278
L+ ++ +L+ E+ +EM P+ TY +I+ C KA E
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAE 883
Query: 279 AVGFYHEM-QEKNMMP 293
A G EM +EK +P
Sbjct: 884 AKGLLKEMVEEKGYIP 899
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A+ +++M K KP+V FN L++ C+S + A +LF +M+ +G P++ S+
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 231 LLEGWSQQQNLLRVNEVCREM---KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
L+ G+ + ++ EM C E T IL++ C+ + D+A G ++
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSE---ATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
K ++PS + +L+ L + + A+E E+ G P +V S R +
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
A +++M G+ P+S T++++L L + + +A + R ++S G EP +TY ++
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLRLLASSKGYEPDETTYHVL 444
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKL 452
+ F E R + ++M + +LP + + L+ L K
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 267 INAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
I+AYC+A+K D A+ + M+ + P+ +++T++NG +D+AL FY++
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
P+ T+N ++ YC S + D A + EMK+ G PN +++ ++ + + +E
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 386 SVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
+ M E+GC + +T +I++ C E R+D + + + +LP + L+
Sbjct: 284 KMAYEMI-ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEK 342
Query: 446 LCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
LC NK A + +++ G P +TL + L +G A F K+
Sbjct: 343 LCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 194/487 (39%), Gaps = 90/487 (18%)
Query: 19 PLSKPYPASL---TPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTID 75
P++ P P P P I +P L TL P H++ + + + P+
Sbjct: 21 PITPPLPEIYRIPNPPPKLPEISIPPTL-------TLSPSPKHSNFVNFLENNLPHHQT- 72
Query: 76 AALADLSVEVSPE-LVAEVLNKLSNAGVLA---LSFFHWAEKQKGFKHSTESFHALIEAL 131
++P+ L+ + +K+ N + A + F+WA F+H +SF + +L
Sbjct: 73 ---------LTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSL 123
Query: 132 GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVS 191
+F ++ L+ + + + ++E
Sbjct: 124 AATHRFDDLYRLLSFVAANPC-----------------PCSSGIFSCPELEPI------- 159
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLV---PDLKSYTILLEGWSQQQNLLRVNEVC 248
F +D C+++ ++ A FD M+ L+ P++ Y ++ G+ + ++ +
Sbjct: 160 -FRSAIDAYCRARKMDYALLAFDTMKR--LIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+ M E +PDV T+ ILIN YC++ K+D A+ + EM+EK P+ F+TLI G S
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+++E ++ + G T +V C R+DDA CG
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA---------CG-------- 319
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
++L L K R + SE Y ++ C E + M + +++
Sbjct: 320 -LVLDLLNK-----------RVLPSEF-------DYGSLVEKLCGENKAVRAMEMMEELW 360
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMET 488
+G P L+ L + + + A + ++M++ GI P + F+ L + L + T
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHST 420
Query: 489 TAIHFAL 495
A L
Sbjct: 421 DANRLRL 427
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFK--ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
IF + I+ +++D AL ++ K +G P YN VV Y S MD A R
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
M + P+ T++I+++ ++ A +FR M E GCEP V +++ ++R F
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK-EKGCEPNVVSFNTLIRGFLSS 276
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLF 474
+++ + + +M G +L+ LC ++D AC +L+ + P +
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 475 STLKQALIDAGMETTAIHFALKIDKLRKTP 504
+L + L A+ ++ K +TP
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G + S + L++ L + + LV D+ +++L + K A
Sbjct: 293 GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRA 352
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E E++ K G P LV+ L KS EKA +KM + G++PD ++ +LL
Sbjct: 353 MEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRD 412
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ N + + +EPD TY +L++ + K + E +EM +K+M+P
Sbjct: 413 LCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Query: 295 PHIFSTLINGL 305
++ L++GL
Sbjct: 473 IFTYNRLMDGL 483
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 174/394 (44%), Gaps = 22/394 (5%)
Query: 50 HTLIPHTPHA-DKICKILSKSPNSTID---AALADLSVEVSPELVAEVLNKLSN--AGVL 103
H L+ + A ++ +I+S SP +D L +SV S LV +V+ N +
Sbjct: 27 HHLVDRSETALHEVIRIVS-SPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRR 85
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXX 162
L FF W+ K G + F+ ++ L + + + L+ D+ K+ + + + T
Sbjct: 86 LLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVA 145
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K ++A+ F+ ++K+ + ++ LC V++A + H+ ++
Sbjct: 146 ETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMH--HHKDVI 203
Query: 223 P--DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK-------A 273
+L Y LL GWS Q+N+ V ++MK PD+ + L+ C+ +
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
EA+ EM+ + P+ ++ L++ LG +R+ E+ + E+ K +G P+T +Y
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS- 392
VV + R ++VDEM + G P + Y ++ L A +F +M
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
Query: 393 SEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
S +G V YD+++ C + +W++
Sbjct: 384 SSVGGYGQV--YDLLIPKLCKGGNFEKGRELWEE 415
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 132/304 (43%), Gaps = 14/304 (4%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW---SQQQNLLRVNEVC 248
+FN ++ VL + K Q L +R D ++++I+ E ++++ + + ++
Sbjct: 105 EFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKIL 164
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+ C D T +I+A C A+G H ++ ++ +L+ G
Sbjct: 165 DKFSCP---QDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQ 221
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW-------SMRMDDAYRVVDEMKQCGV 361
+ + EA + K+ G P+ +N+++ C S + +A ++ EM+ +
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKI 281
Query: 362 GPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEM 421
P S +Y+I+L L + R +E+ + +M GC+P +Y ++R+ R
Sbjct: 282 QPTSMSYNILLSCLGRTRRVRESCQILEQMKRS-GCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 422 AVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ D+M RG P ++ LI LC +++ A + F++M + ++ L L
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 482 IDAG 485
G
Sbjct: 401 CKGG 404
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 110/255 (43%), Gaps = 13/255 (5%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D T+ I+ K K ++A+G + + + + + +I+ L S + AL
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
K E Y +++ + + +A RV+ +MK G+ P+ ++ +L L +
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCER 256
Query: 379 RTTQ-------EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+ EA ++ M S +PT +Y+I+L R+ + +QM+ G
Sbjct: 257 NVNRNPSGLVPEALNIMLEMRS-YKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSG 315
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
P ++ ++ L + + +M++ G RP + L L G+E +
Sbjct: 316 CDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL--CGVE--RV 371
Query: 492 HFALKI-DKLRKTPL 505
+FAL++ +K++++ +
Sbjct: 372 NFALQLFEKMKRSSV 386
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 157/373 (42%), Gaps = 12/373 (3%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF---KVIWNLVEDMKQRKLLTRDTXX 159
L W Q + S F LI A GK+ F + + +++ M + T
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM--- 216
EA+ F +M+ G +P + ++ + ++A+E+F+ +
Sbjct: 181 MESYGRGGKCNNAEAI--FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE 238
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
+ L PD K Y +++ + + N + +V M + VTY L++ Y
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS---Y 295
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
E Y +MQ ++ P ++ LI G +R +EAL +E+ G P YN +
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ A+ S ++ A V M++ + P+ +Y +L + A + A F+R+ + G
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD-G 414
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
EP + TY +++ + ++ M V+++MR GI + ++ A +A
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 474
Query: 457 KYFQQMLDVGIRP 469
++++M G+ P
Sbjct: 475 GWYKEMESCGVPP 487
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 7/289 (2%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
DF L+ K + A+ + + G P++ SYT L+E + + + R M
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 200
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN---MMPSPHIFSTLINGLGSD 308
+ EP +TY I++ + + K+ EA + + ++ + P ++ +I
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
++A + + G T TYN+++ + + ++ D+M++ + P+ +Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
+++ +AR +EA SVF M + G PT Y+I+L F ++ V+ MR
Sbjct: 318 ALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
I P + + ++SA +A+ ++ A K+F+++ G P + TL
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 425
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVK 172
KG ST ++++L+ ++ I+ D QR + D + + +
Sbjct: 276 KGVPQSTVTYNSLMSFETSYKEVSKIY----DQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ FE+M G++P +N L+D S VE+A+ +F MR + PDL SYT +L
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ ++ + + +K + FEP++VTYG LI Y KA ++ + Y +M+ +
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ I +T+++ G K AL +Y++ ++ G P+ N ++
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 142/290 (48%), Gaps = 9/290 (3%)
Query: 170 KVKEAVETFEKM---EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
K KEA E FE + +K LKP+ ++ ++ + K+ + EKA+++F M +G+
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L+ S + + V+++ +M+ +PDVV+Y +LI AY +A++ +EA+ + EM
Sbjct: 284 TYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ ++ L++ +++A ++ + + P+ +Y ++ AY + M
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS-SEMGCEPTVSTYD 405
+ A + +K G PN TY ++ KA ++ V+ +M S + T+ T
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
+ C + + + +M + G+ P VL+S ++L+ A
Sbjct: 461 MDASGRC--KNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+ + +LI AY K ++ A + + P+ ++ L+ G + + A + +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM---KQCGVGPNSRTYDIILHHLIK 377
+++G P TY ++ + + +A V + + K+ + P+ + Y ++++ K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A ++A VF M + G + TY+ ++ + + ++DQM+ I P +
Sbjct: 260 AGNYEKARKVFSSMVGK-GVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVV 315
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
+ +LI A A + + A F++MLD G+RP ++ L A +GM
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 162/372 (43%), Gaps = 11/372 (2%)
Query: 120 STESFHALIEALGK---IRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
S+E + A I+A G+ + + + ++ +++ +R ++ + K A E
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEK---ACE 526
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
FE M YG+ P+ +N LV +L + K + +KMR G V D Y ++ +
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ L EV +EM EPDVV YG+LINA+ +A+ + M+E + +
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV 646
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP---TYNAVVGAYCWSMRMDDAYRVV 353
I+++LI LDEA Y K + + P T N ++ Y + A +
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
D MKQ G N T+ ++L K +EA + ++M EM +Y+ +L LF
Sbjct: 707 DSMKQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQM-REMKILTDPLSYNSVLGLFAL 764
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANL 473
+ R + + +M + GI P F L + L A + +++ I+ L
Sbjct: 765 DGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLEL 824
Query: 474 FSTLKQALIDAG 485
+ + +L+ G
Sbjct: 825 WISTLSSLVGIG 836
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 151/327 (46%), Gaps = 10/327 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ETF++M + G+ P FN ++ + + + + L M+ PD ++Y
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYN 371
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ ++ ++ R +EMK + +PD V+Y L+ A+ +EA G EM +
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ + S L + L+++ ++++F G + Y+A + AY + +A
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMS-SEGYSANIDAYGERGYLSEA 490
Query: 350 YRVVDEMKQCGVGPNSRT---YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
RV C N RT Y++++ +++ ++A +F M S G P TY+
Sbjct: 491 ERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMS-YGVTPDKCTYNT 545
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++++ + ++MR G + + +IS+ +L+ A + +++M++
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 467 IRPPANLFSTLKQALIDAGMETTAIHF 493
I P ++ L A D G A+ +
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSY 632
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 8/322 (2%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
K V ++N ++ SKS EKA ELF+ M G+ PD +Y L++ + +
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+M+ + D + Y +I+++ K + + A Y EM E N+ P ++ LIN
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ-CGVG--P 363
+ +A+ + E K G + YN+++ Y +D+A + ++ Q C P
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
+ T + +++ + ++A ++F M E T+ ++L ++ R + +
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQR--GEANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
QMR IL + ++ + A + F++M+ GI+P + F +L L+
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 484 AGMETTAIHFALKIDKLRKTPL 505
GM A+ KI+++RK +
Sbjct: 800 LGMSKKAVR---KIEEIRKKEI 818
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 46/370 (12%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+++M + G+KP S + L+DV K A KM G+ PD + I+L+ + +
Sbjct: 210 WDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKK 269
Query: 238 QQNLLRVNEVCREMKCECFEPD------VVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ + E ++ C+ + D TY +I+ Y K+ + EA + M E+ +
Sbjct: 270 AREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI 329
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ F+T+I+ G++ +L E + K + AP+T TYN ++ + + ++ A
Sbjct: 330 VPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGA 388
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
EMK G+ P+ +Y +L+ +EA + M + E T + R++
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD-NVEIDEYTQSALTRMY 447
Query: 412 CDEERLDMEMAVW-------------------DQMRARGILPGMHVFF------------ 440
+ E L+ + W D RG L F
Sbjct: 448 VEAEMLEKSWS-WFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVI 506
Query: 441 ---VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKI 497
V+I A + + AC+ F+ M+ G+ P ++TL Q L A M + +
Sbjct: 507 EYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY---L 563
Query: 498 DKLRKTPLVA 507
+K+R+T V+
Sbjct: 564 EKMRETGYVS 573
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 12/263 (4%)
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
K TI+L+ +Q + R E+ K + C+E +V+ Y I++ KA K+ +
Sbjct: 155 KERTIILK---EQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWD 211
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM K + P + TLI+ AL + K G P+ T V+ Y +
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 345 RMDDAYRV-----VDEMK-QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
A DE K V +S TY+ ++ K+ +EA F+RM E G
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE-GIV 330
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
PT T++ ++ ++ + +L ++ M+ P + +LIS N ++ A Y
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAY 389
Query: 459 FQQMLDVGIRPPANLFSTLKQAL 481
F++M D G++P + TL A
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAF 412
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 139/278 (50%), Gaps = 10/278 (3%)
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWS-QQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
Q+ FD ++ V + +LL G+S ++ ++ + E+ CE V ++ L++
Sbjct: 113 QKKFDDIKSEDFVIRI----MLLYGYSGMAEHAHKLFDEMPELNCE---RTVKSFNALLS 165
Query: 269 AYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
AY +KK DEA+ + E+ EK + P ++T+I L +D+ L +E+ + NGF
Sbjct: 166 AYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFE 225
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
P+ ++N ++ + + R+ D MK + PN R+Y+ + L + + +A ++
Sbjct: 226 PDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNL 285
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
M +E G P V TY+ ++ + + L+ M +++M+ +G+ P + +LI LC
Sbjct: 286 IDVMKTE-GISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLC 344
Query: 448 HANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
LD A + ++ + + N++ + + L+ AG
Sbjct: 345 KKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAG 382
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+ EA++TF+++ EK G+ P++ +N ++ LC+ S++ +F+++ G PDL S+
Sbjct: 172 KLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
LLE + +++ + + + MK + P++ +Y + + KK+ +A+ M+
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P H ++ LI D L+E ++ Y + K G P+T TY ++ C +D
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
A V +E + + Y ++ L+ A EA + +
Sbjct: 352 AVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 141/288 (48%), Gaps = 11/288 (3%)
Query: 111 AEKQKGFKHSTES---------FHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXX 160
+K + FK S ES + A I L + ++F I +++ K+ + + D
Sbjct: 68 TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR 127
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR- 219
+ A + F++M + + V FN L+ SK +++A + F ++ +
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ PDL +Y +++ ++ ++ + + E++ FEPD++++ L+ + + + + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ M+ KN+ P+ +++ + GL +K+ +AL + K G +P+ TYNA++ A
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
Y +++ + +EMK+ G+ P++ TY +++ L K A V
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 2/242 (0%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAV 175
+ + +SF+AL+ A ++ +++ ++ +T D T + + +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
FE++EK G +P++ FN L++ + + + ++D M+ + L P+++SY + G
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + + MK E PDV TY LI AY +E + Y+EM+EK + P
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ LI L LD A+E E+ + Y VV + ++D+A ++V
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
Query: 356 MK 357
K
Sbjct: 394 GK 395
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 157/373 (42%), Gaps = 12/373 (3%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF---KVIWNLVEDMKQRKLLTRDTXX 159
L W Q + S F LI A GK+ F + + +++ M + T
Sbjct: 128 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 187
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM--- 216
EA+ F +M+ G +P + ++ + ++A+E+F+ +
Sbjct: 188 MESYGRGGKCNNAEAI--FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDE 245
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
+ L PD K Y +++ + + N + +V M + VTY L++ Y
Sbjct: 246 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSY 302
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
E Y +MQ ++ P ++ LI G +R +EAL +E+ G P YN +
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ A+ S ++ A V M++ + P+ +Y +L + A + A F+R+ + G
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD-G 421
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
EP + TY +++ + ++ M V+++MR GI + ++ A +A
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 481
Query: 457 KYFQQMLDVGIRP 469
++++M G+ P
Sbjct: 482 GWYKEMESCGVPP 494
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 7/289 (2%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
DF L+ K + A+ + + G P++ SYT L+E + + + R M
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 207
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN---MMPSPHIFSTLINGLGSD 308
+ EP +TY I++ + + K+ EA + + ++ + P ++ +I
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
++A + + G T TYN+++ + + ++ D+M++ + P+ +Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
+++ +AR +EA SVF M + G PT Y+I+L F ++ V+ MR
Sbjct: 325 ALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
I P + + ++SA +A+ ++ A K+F+++ G P + TL
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVK 172
KG ST ++++L+ ++ I+ D QR + D + + +
Sbjct: 283 KGVPQSTVTYNSLMSFETSYKEVSKIY----DQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ FE+M G++P +N L+D S VE+A+ +F MR + PDL SYT +L
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ ++ + + +K + FEP++VTYG LI Y KA ++ + Y +M+ +
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ I +T+++ G K AL +Y++ ++ G P+ N ++
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 170 KVKEAVETFEKM---EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
K KEA E FE + +K LKP+ ++ ++ + K+ + EKA+++F M +G+
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L+ S + + V+++ +M+ +PDVV+Y +LI AY +A++ +EA+ + EM
Sbjct: 291 TYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ ++ L++ +++A ++ + + P+ +Y ++ AY + M
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
+ A + +K G PN TY ++ KA ++ V+ +M G + +
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS-GIKANQTILTT 466
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
I+ + + + +M + G+ P VL+S ++L+ A
Sbjct: 467 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+ + +LI AY K ++ A + + P+ ++ L+ G + + A + +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM---KQCGVGPNSRTYDIILHHLIK 377
+++G P TY ++ + + +A V + + K+ + P+ + Y ++++ K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
A ++A VF M + G + TY+ ++ + + ++DQM+ I P +
Sbjct: 267 AGNYEKARKVFSSMVGK-GVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVV 322
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
+ +LI A A + + A F++MLD G+RP ++ L A +GM
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 11/281 (3%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXX 162
LAL F W +Q+G+KH+ E++H +I+ ++ + L+E++
Sbjct: 90 LALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCI 149
Query: 163 XXXXXXXKV--KEAVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKS--------VEKAQE 211
K A + + KM + KP++ + L+ L K + + +
Sbjct: 150 IRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRS 209
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
L +M+ G++PD ++++ +++ + V +EM EP+ TY L+ C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
+ + + +GFY EMQ K M+P+ + LI L ++RLDEA+E AN +P+
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TYN V+ C R +A +V+E K+ R Y ++
Sbjct: 330 TYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 69/134 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA+ F++M YG +P ++ LV +C+ V + + +M+ +G+VP+ Y
Sbjct: 238 EVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYM 297
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ S ++ L EV +M PD++TY ++ C+ + EA+ E +++
Sbjct: 298 VLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Query: 290 NMMPSPHIFSTLIN 303
+ + + TL++
Sbjct: 358 DPVMGERNYRTLMD 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ +MK GV P++ ++I+ K EA VF+ M+ G EP TY +++
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMAL-YGSEPNAYTYSYLVKGV 268
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
C++ R+ + + +M+ +G++P + VLI +L +LD A + ML + P
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 472 NLFSTLKQALIDAGMETTAI 491
++T+ L G + A+
Sbjct: 329 LTYNTVLTELCRGGRGSEAL 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
++ K+NG P+T N ++ AY + +D+A RV EM G PN+ TY ++ + +
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
+ ++ M + G P S Y +++ E RLD + V M A + P M
Sbjct: 272 GRVGQGLGFYKEMQVK-GMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
Query: 439 FFVLISALCHANKLDAACKYFQQ 461
+ +++ LC + A + ++
Sbjct: 331 YNTVLTELCRGGRGSEALEMVEE 353
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 152/354 (42%), Gaps = 28/354 (7%)
Query: 59 ADKICKILSKSPNS-TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKG- 116
A ++ +++K S ++ L ++ + +S V VL +L + AL+FFHW
Sbjct: 197 AGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSS 256
Query: 117 --FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKE 173
++HST +++A + L + W++V++MK + DT + E
Sbjct: 257 SGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAE 316
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCK------------SKSVEKAQELFDKMRHRGL 221
V+ +E M KP + D + L+ L S+ E + K + G+
Sbjct: 317 TVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGI 376
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
L S E E+ + M+ +EPD +TY L+ CKAK+ +EA G
Sbjct: 377 HRSLTSVGRFDEA----------EEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 426
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+M+ + P ++ LI G + LD+AL + GF ++ + ++ +
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 342 WSMRMDDAYRVVDEM-KQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
+ + A + EM K V P TY +++ L+K + ++EA + + M +
Sbjct: 487 IHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 177/460 (38%), Gaps = 46/460 (10%)
Query: 65 ILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESF 124
+L + ++ L + ++ E VL KL A F W + G ST +
Sbjct: 67 VLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLY 126
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET---FEK 180
++ L + R K W + +MKQ L DT +AV +E+
Sbjct: 127 SIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYER 186
Query: 181 MEKYG----LKPEVSDFNKLVDVLCKSKSVEKA-QELFDKMRHRGLVPDLK--------- 226
M K + EVS D C+ VE+ QE+ + ++ LK
Sbjct: 187 MLKENAMSVVAGEVSAVVTKGDWSCE---VERELQEMKLVLSDNFVIRVLKELREHPLKA 243
Query: 227 ---------------------SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
+Y L ++ ++ V EMK ++ D+ TY
Sbjct: 244 LAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIK 303
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS--DKRLDEALEFYEKFKA 323
+ + K++ E V Y M + PS S L+ L + LD K+++
Sbjct: 304 VSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYES 363
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQE 383
G + Y+ + + R D+A + M+ G P++ TY ++ L KA+ +E
Sbjct: 364 TGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEE 423
Query: 384 AYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
A V +M ++ GC P + T+ I+++ C LD +A + M +G ++ VLI
Sbjct: 424 ARGVLDQMEAQ-GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLI 482
Query: 444 SALCHANKLDAACKYFQQML-DVGIRPPANLFSTLKQALI 482
NK + A + +M+ + ++P + + L L+
Sbjct: 483 DGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA E + M G +P+ +++LV LCK+K +E+A+ + D+M +G PD+K++T
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QE 288
IL++G + L + M + F+ D +LI+ + K++ A F EM +
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
N+ P + LI+ L K+ +EAL+ + K + ++ + + ++D
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFG---TLED 561
Query: 349 AYRVVD 354
A + +D
Sbjct: 562 AKKFLD 567
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA ++ME G P++ + L+ CK+ ++KA F M +G D
Sbjct: 420 RLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLD 479
Query: 230 ILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L++G+ + EM K +P TY +LI+ K KK +EA+ M++
Sbjct: 480 VLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+N F + G+ L++A +F + + +P Y V+ A+ R+ D
Sbjct: 540 QNYPAYAEAFDGYLAKFGT---LEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTD 595
Query: 349 A 349
A
Sbjct: 596 A 596
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 131/267 (49%), Gaps = 6/267 (2%)
Query: 128 IEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKV-KEAVETFEKMEKYGL 186
+ L K R+F I L+E K + + + A+ TFE+M++YG
Sbjct: 74 VRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGT 133
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKM--RHRGLVPDLKSYTILLEGWSQQQNLLRV 244
FN L++ SK+ +K +LFD++ R+ ++PD SY IL++ + +
Sbjct: 134 PRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKA 193
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
E+ R+M+ + E + + ++++ K + + A ++EM +K ++ I
Sbjct: 194 IEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-- 251
Query: 305 LGSDKRLDEAL-EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
+ + K E + E E+ + G P+T +YN ++ AYC +D+A +V + ++ P
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRR 390
N+ T+ ++ HL +R ++ Y++F++
Sbjct: 312 NAATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 12/252 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKV 171
Q G S SF+AL+ A + F + L +++ QR K++
Sbjct: 130 QYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGT 189
Query: 172 KE-AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
E A+E +M+ G++ F ++ L K +E A L+++M +G D +Y +
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ +Q+++ RV E+ EM +PD ++Y L+ AYC+ DEA Y ++ N
Sbjct: 250 RIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA----VVGAYCWSMRM 346
P+ F TLI L + ++ Y FK + + + P +N VVG + +
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQG---YAIFKKSVYMHKIPDFNTLKHLVVG-LVENKKR 364
Query: 347 DDAYRVVDEMKQ 358
DDA ++ +K+
Sbjct: 365 DDAKGLIRTVKK 376
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 8/283 (2%)
Query: 173 EAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+A+E F+ + E+ +P+ + KL+ +L KS +AQ+LFD+M GL P ++ YT L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 232 LEGWSQQQNLLRVNEVCREMKC--ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L +++ + + +MK +C +PDV TY L+ A A ++D Y EM E+
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQC-QPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 224
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ + +++G G R D+ + + + P+ T N ++ + ++D
Sbjct: 225 LITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM 284
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
++ + G+ P +RT++I++ K R + SV M ++ T STY+ I+
Sbjct: 285 MESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM-RKLEFPWTTSTYNNII 343
Query: 409 RLFCD-EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHAN 450
F D + +ME+ +DQMR+ G+ F LI+ +A
Sbjct: 344 EAFADVGDAKNMEL-TFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
++P TY L+ K+ + + A + EM E+ + P+ +++ L+ +D+A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 316 EFYEKFKA-NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
+K K+ P+ TY+ ++ A + + D + EM + + PN+ T +I+L
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
+ + V M C+P V T +IIL +F + ++DM + +++ R GI P
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFA 494
F +LI + D + M + + ++ + +A D G A +
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVG---DAKNME 356
Query: 495 LKIDKLRKTPLVA 507
L D++R + A
Sbjct: 357 LTFDQMRSEGMKA 369
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
++ L++A QF ++ +L ++M +R L+T +T V F++ME
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDER-LITPNTVTQNIVLSGYGR-----VGRFDQME 250
Query: 183 KY--------GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
K KP+V N ++ V ++ + ++K R+ G+ P+ +++ IL+
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ +++ +++ V M+ F TY +I A+ + +M+ + M
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370
Query: 295 PHIFSTLINGL---GSDKRLDEALEFYEKFKANGFAPE-TPTYNAVVGAYCWSMRMDDAY 350
F LING G ++ +++ KF+ PE T YNAV+ A + + +
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEI----PENTAFYNAVISACAKADDLIEME 426
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
RV MK+ +SRT++I++ K + Y
Sbjct: 427 RVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIY 461
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 302 INGLGSDKRLDEALEFYEKFKANGF-APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
++ L + K+ +ALE ++ + F P+ TY ++ S + + A ++ DEM + G
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ P Y +L ++ +A+S+ +M S C+P V TY +L+ D + D+
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+++ +M R I P +++S + D K ML
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 150/338 (44%), Gaps = 43/338 (12%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA ETF KM + G++P+ + +++ ++ +++A EL +++ L P +YT
Sbjct: 597 RVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYT 656
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G+ + + + + +M + P+VV Y LI + K + + + M E
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 290 NMMPSPHIFSTLINGL----------------GSDKRLDE-------------------- 313
++ + TL++GL G +K L
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK 776
Query: 314 --ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
A+E K K + P +N ++ YC + R+D+AY ++ M++ G+ PN TY I+
Sbjct: 777 SFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+ I+A + A +F + CEP Y +L+ CD +R +A+ +M+ G
Sbjct: 836 MKSHIEAGDIESAIDLFEGTN----CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
I P + L+ LC++ A K + M + I P
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWP 929
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 3/306 (0%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+V + +V+ LCK + A + D M GL P + Y+ ++ +Q ++ E
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M +PD + Y I+IN Y + + DEA E+ + + PS ++ LI+G
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+++ ++ +K +G +P Y A++G + ++ + M + + +
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI--ILRLFCDEERLDMEMAVWD 425
Y +L L +A ++ V E + + T + I + M V
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIG 784
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+++ + I+P +++ +I+ C A +LD A + + M GI P ++ L ++ I+AG
Sbjct: 785 KVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 486 METTAI 491
+AI
Sbjct: 844 DIESAI 849
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ---QNLLRVNEVCREMKCECF 256
LC ++ A +KM + G P SY +++ Q+ ++L + + +E+ F
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD---F 543
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
PDV TY I++N CK D A M+E + P+ I+S++I LG R+ EA E
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI 376
+ K +G P+ Y ++ Y + R+D+A +V+E+ + + P+S TY +++ +
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K ++ +M E G P V Y ++ F + ++ M I
Sbjct: 664 KMGMMEKGCQYLDKM-LEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 437 HVFFVLISALCHA 449
+ L+S L A
Sbjct: 723 IAYITLLSGLWRA 735
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 128/322 (39%), Gaps = 30/322 (9%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR--- 249
+ L+ K ++KA +L +M G+VPD +Y +LL+ + L + +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 250 -----------------EMKCECFEPDV---------VTYGILINAYCKAKKYDEAVGFY 283
E+K E ++ V ++ A C + Y A+
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
+M P P ++++I L + +++ + F P+ TY VV C
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
D A+ ++D M++ G+ P Y I+ L K EA F +M E G +P
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM-LESGIQPDEIA 619
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
Y I++ + R+D + +++ + P + VLIS ++ C+Y +ML
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Query: 464 DVGIRPPANLFSTLKQALIDAG 485
+ G+ P L++ L + G
Sbjct: 680 EDGLSPNVVLYTALIGHFLKKG 701
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 24/342 (7%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + ME+ GL+P V+ ++ ++ L K V +A+E F KM G+ PD +Y I++
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+++ + NE+ E+ P TY +LI+ + K ++ + +M E + P
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +++ LI + + N + Y ++ +M +V+
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVI 745
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEM-----------GCEPTVS 402
E P +L LI+ + S S+ P +
Sbjct: 746 VE-------PGKEK---LLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLY 795
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
++ I+ +C RLD + M+ GI+P + + +L+ + A +++A F+
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE-- 853
Query: 463 LDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
P ++STL + L D A+ L++ K P
Sbjct: 854 -GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 161/419 (38%), Gaps = 47/419 (11%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPEL----VAEVLNKLSNAGV--LALSFFHWAEKQKGF 117
+++ S + + A +AD +V+ EL ++ KL+ G +A +F++ G
Sbjct: 68 RVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGI 127
Query: 118 KHSTESFHALIEALGKIRQF-KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ +++ L K+R+F + +L + +R++ + EA
Sbjct: 128 VPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH 187
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGW 235
FE++++ G + +L LC + +A + D + +P + Y L +
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCF 247
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + M+ + + D V Y L+ YCK A+ Y M E++ P
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV-VD 354
IF+TLI+G LD+ + + G TY+ ++G+YC +D A R+ V+
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 355 EMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDE 414
+ N Y ++ K +A + RM
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM----------------------- 404
Query: 415 ERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD--VGIRPPA 471
LD GI+P +FVL+ L ++L A Q +LD GI PP
Sbjct: 405 --LD-----------NGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV 450
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A E+ K++ + ++P+L + ++ G+ L M+ E P++VTY IL+
Sbjct: 779 AMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
++ +A + A+ + + N P ++STL+ GL KR +AL + + +G P
Sbjct: 838 SHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
+Y ++ C+S +A +VV +M + P S + +++ L + + +EA ++F
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 389 RRM 391
M
Sbjct: 955 AIM 957
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E K++K + P + N ++ C + +++A + M+ G+VP+L +YTIL++
Sbjct: 779 AMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ ++ CE PD V Y L+ C K+ +A+ EMQ+ + P
Sbjct: 838 SHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + L+ L + EA++ + A P + + ++ C ++ +A +
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 354 DEMKQCG 360
M Q G
Sbjct: 955 AIMVQSG 961
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 1/232 (0%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN-MMPSPHIFSTLINGLGSDKRLDEA 314
E D YG LI + + A FY++ N ++P + +++ L +R DEA
Sbjct: 91 IELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEA 150
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
++ A+G+AP + + VV C R +A+ +++K+ G G +
Sbjct: 151 RAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKG 210
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
L EA + + V+ Y + FC A++D M G
Sbjct: 211 LCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYV 270
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM 486
++ L+ C N + A + + +M++ +F+TL + GM
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM 322
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 26/335 (7%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQE---LFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+ P + +N + + E A E LF + + L P + ++ IL++G NL
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSNDNL 217
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK--NMMPSPHIFS 299
+ E+ +M + F D V Y L+ K D + Y E++EK + ++
Sbjct: 218 EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYG 277
Query: 300 TLINGLGSDKRLDEALEFYE-------KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
L+ G + EA+E YE K + + A YN V+ A + + D+A ++
Sbjct: 278 QLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMA-----YNYVLEALSENGKFDEALKL 332
Query: 353 VDEMKQCGVGP-----NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
D +K+ P N T++++++ +EA VFR+M + C P +++ +
Sbjct: 333 FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG-DFKCSPDTLSFNNL 391
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ CD E L ++ +M + + P + + +L+ K+D Y++ M++ +
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 468 RPPANLFSTLKQALIDAG-METTAIHFALKIDKLR 501
RP +++ L+ LI AG ++ F + + KL+
Sbjct: 452 RPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLK 486
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 49/348 (14%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
L P ++ F LV L + ++EKA E+ + M +G V D Y+ L+ G + + V
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 246 EVCREMK-----------------------------CECFEPDV----------VTYGIL 266
++ +E+K EC+E V + Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHI------FSTLINGLGSDKRLDEALEFYEK 320
+ A + K+DEA+ + ++ K P H+ F+ ++NG + + +EA+E + +
Sbjct: 317 LEALSENGKFDEALKLFDAVK-KEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+P+T ++N ++ C + + +A ++ EM++ V P+ TY +++ K
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
E + ++ M E P ++ Y+ + +LD + +D M ++ + F
Sbjct: 436 IDEGAAYYKTMV-ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKF 494
Query: 441 VLISALCHANKLDAACKYFQQMLDVG-IRPPANLFSTLKQALIDAGME 487
++ AL A +LD K +MLD +R L +K+ L G E
Sbjct: 495 IM-RALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGRE 541
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 170 KVKEAVETFEKMEKYGLKP-----EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
K EA++ F+ ++K P + FN +V+ C E+A E+F +M PD
Sbjct: 325 KFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPD 384
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
S+ L+ + L ++ EM+ + +PD TYG+L++ K K DE +Y
Sbjct: 385 TLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYK 444
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
M E N+ P+ +++ L + L +LD+A F++ + + Y ++ A +
Sbjct: 445 TMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLKMDDEAYKFIMRALSEAG 503
Query: 345 RMDDAYRVVDEM 356
R+D+ ++VDEM
Sbjct: 504 RLDEMLKIVDEM 515
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ E TFE+M +YG P FN L+DV K+K +K ELF + G+V D+ SY
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNT 738
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + ++ ++ + M+ + F + Y L++AY K K+ ++ M++
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P + ++ +IN G +DE + ++ K +G P+ +YN ++ AY +++A
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAV 858
Query: 351 RVVDEMKQCGVGPNSRTY 368
+V EM+ + P+ TY
Sbjct: 859 GLVKEMRGRNIIPDKVTY 876
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 141/298 (47%), Gaps = 3/298 (1%)
Query: 171 VKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++EA E M E+ + P+V F ++ + K +K Q L+ ++R G+ + + Y
Sbjct: 609 LEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYN 668
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ ++ L ++ EM F P+ VT+ +L++ Y KAK + + + + ++
Sbjct: 669 CVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKR 727
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++T+I G +K + + +GF+ YN ++ AY +M+
Sbjct: 728 HGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKF 787
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ MK+ GP+ TY+I+++ + E V + + E G P + +Y+ +++
Sbjct: 788 RSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL-KESGLGPDLCSYNTLIK 846
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ ++ + + +MR R I+P + L++AL ++ A K+ M +GI
Sbjct: 847 AYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA F M K+G+ E S ++ ++ + + + +KA+E+ D M+ + L+++ +
Sbjct: 261 VEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV 319
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+L +SQQ + + M+ F P+++ Y LI Y K K + A G +H +
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + ++I G G +EA +Y++ K G+ P + ++ D A
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 351 RVVDEMKQCG 360
+ +++M G
Sbjct: 440 KTIEDMTGIG 449
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
GF +T +F+ L++ GK + FK + L K+ ++ +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMS 753
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ M+ G + +N L+D K K +EK + + +M+ PD +Y I++ +
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIY 813
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+Q + V +V +E+K PD+ +Y LI AY +EAVG EM+ +N++P
Sbjct: 814 GEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK 873
Query: 296 HIFSTLINGLGSDKRLDEALE 316
++ L+ L +R DE LE
Sbjct: 874 VTYTNLVTAL---RRNDEFLE 891
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 156/352 (44%), Gaps = 6/352 (1%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKL-SNAGVLALSFFHWAEKQKGFKHSTESFHALIE 129
N ID + + S E +L +L S + A+ FF W + ++ ++
Sbjct: 123 NGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILR 182
Query: 130 ALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLK 187
LG+ ++ +L++++ + K VK A + F M ++G++
Sbjct: 183 VLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVR 242
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P V+ L+ + K+ +VE+A+ F MR G+V + +Y+ ++ +++ + + EV
Sbjct: 243 PNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEV 301
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
MK + + + +++NAY + K + A M+ P+ ++TLI G G
Sbjct: 302 IDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGK 361
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+++ A + + G P+ +Y +++ + + ++A E+K+CG PNS
Sbjct: 362 IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFN 421
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
+++ K A M+ +GC+ + S IIL+ + ++D+
Sbjct: 422 LFTLINLQAKYGDRDGAIKTIEDMTG-IGCQYS-SILGIILQAYEKVGKIDV 471
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 162/425 (38%), Gaps = 70/425 (16%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ ++I ++R + +++ MKQ ++ L + K++ A M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
E G P + +N L+ K +E AQ LF ++ + GL PD SY ++EGW + N
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF------------------- 282
+E+K ++P+ LIN K D A+
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIIL 460
Query: 283 --YHEMQEKNMMP-------SPHI------FSTLINGLGSDKRLDEALEFYEKFKANGFA 327
Y ++ + +++P HI FS+L+ +D+ L + K A
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 328 PETPTYNAVVGA-------------YCWSMRMD------------DAYRVVDE------- 355
E+ Y+ ++ + Y M D D Y V+ E
Sbjct: 521 FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 356 ---MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+K GV + + I++ +KA + +EA SV M + P V + +LR++
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ D ++ ++R GI ++ +I+ A LD F++M+ G P
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 473 LFSTL 477
F+ L
Sbjct: 701 TFNVL 705
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 144/326 (44%), Gaps = 22/326 (6%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL---LRVNEVCREMK 252
++D+ +A++L+ ++ G+V D ++I++ + + +L V E+ E K
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PDV + ++ Y K D+ Y+ +++ + + +++ +IN LD
Sbjct: 624 D--IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM----KQCGVGPNSRTY 368
E +E+ GF P T T+N ++ Y + ++ V+E+ K+ GV + +Y
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA----KLFKKVNELFLLAKRHGV-VDVISY 736
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
+ I+ K + S + M + G ++ Y+ +L + +++++ ++ +M+
Sbjct: 737 NTIIAAYGKNKDYTNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 429 ARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMET 488
P + + ++I+ +D +++ + G+ P ++TL +A GM
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 489 TAIHFALKI-------DKLRKTPLVA 507
A+ ++ DK+ T LV
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVT 881
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 6/343 (1%)
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVL 200
+++E K K L T + + A++ FE + E+ KP V + KL+ +L
Sbjct: 101 SIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVML 160
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC--ECFEP 258
K K EKA ELF +M + G V + + YT L+ +S+ + MK C +P
Sbjct: 161 GKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNC-QP 219
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE-F 317
DV TY ILI ++ + +D+ +M+ + + P+ ++TLI+ G K E
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ + P++ T N+ + A+ + +++ ++ + G+ PN RT++I+L K
Sbjct: 280 IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGK 339
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
+ ++ +V M + T+ TY++++ F L ++ M++ I P
Sbjct: 340 SGNYKKMSAVMEYM-QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 398
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
L+ A A+K D + + + IR F+ L A
Sbjct: 399 TLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDA 441
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
+++G + +T +++ LI+A GK + F + + + M D T +
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ +EK + G++P + FN L+D KS + +K + + M+ + +Y +
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++ + + +L ++ + R M+ E P VT L+ AY +A K D+ G ++ +
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ F+ L++ G ++ E E + GF P+ TY +V AY
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSY 228
+V EA + +++ + P+ +N L+ LCK K + E D+MR + PDL S+
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
TIL++ +NL + ++ F+PD Y ++ +C K EAVG Y +M+E
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ + P ++TLI GL R++EA + + G+ P+T TY +++ C
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 171 VKEAVETFEKMEKY--GLKPEVSDFNKLVDVLCKS--KSVEKAQELFDKMRHRGLVPDLK 226
V + V+ F+ + K +P S F L+ C++ S+ + + M + GL PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ I + + + ++ +E+ + PD TY L+ CK K F EM
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 287 QEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
++ ++ P F+ LI+ + + K L EA+ K GF P+ YN ++ +C +
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+A V +MK+ GV P+ TY+ ++ L KA +EA + M + G EP +TY
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM-VDAGYEPDTATYT 339
Query: 406 IILRLFC 412
++ C
Sbjct: 340 SLMNGMC 346
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M GL+P+ + V LC++ V++A++L ++ + PD +Y LL+ + ++
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 241 LLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
L V E EM+ + +PD+V++ ILI+ C +K EA+ ++ P +++
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
T++ G + + EA+ Y+K K G P+ TYN ++ + R+++A + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 360 GVGPNSRTYDIILHHLIK 377
G P++ TY +++ + +
Sbjct: 330 GYEPDTATYTSLMNGMCR 347
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 129/304 (42%), Gaps = 43/304 (14%)
Query: 202 KSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCREMK-----CEC 255
KS ++ A+ LF+ + +P DLK + +L+ + ++ VN+ + +
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYG---SIAVVNDTVKLFQHILKSQPN 117
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F P T+ IL++ C+A D ++ H + + ++N
Sbjct: 118 FRPGRSTFLILLSHACRAP--DSSISNVH-----------RVLNLMVN------------ 152
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
NG P+ T + V + C + R+D+A ++ E+ + P++ TY+ +L HL
Sbjct: 153 --------NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
K + Y M + +P + ++ I++ C+ + L M + ++ G P
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG-METTAIHFA 494
++ ++ C +K A +++M + G+ P ++TL L AG +E ++
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 495 LKID 498
+D
Sbjct: 325 TMVD 328
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 118 KHS---TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVK 172
KHS T +++ L++ L K + V++ V++M+ + D + ++
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ K+ G KP+ +N ++ C +A ++ KM+ G+ PD +Y L+
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
G S+ + + M +EPD TY L+N C+
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 149/329 (45%), Gaps = 10/329 (3%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
++P V ++ + + + L ++ H++ K+K + TES +AL+ + K Q K+ +
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYS-KRKDY-QPTESLYALM--INKFGQAKMYDEIE 115
Query: 145 EDMKQRKLLTRDTXXX------XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVD 198
E M+ KL R ++ A+E M +G P FN +++
Sbjct: 116 EVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILN 175
Query: 199 VLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
+L +K ++ ++F G+ D IL++G + NL ++ E + P
Sbjct: 176 LLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRP 235
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
+V+T+ LI +C K++EA M+++ + P F+ LI+GL R++E ++
Sbjct: 236 NVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLL 295
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
E+ K G P TY V+ R +A ++ +M G+ P+ +Y ++ L +
Sbjct: 296 ERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCET 355
Query: 379 RTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
++ E V R+M + T+ + ++
Sbjct: 356 KSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P ++ ++N AK +DE + + + + LI GL L+ AL+
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
++F P T++ ++ +C + ++A+++++ M++ + P++ T++I++ L K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 378 ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH 437
+E + RM + GCEP TY +L D++R + QM + G+ P
Sbjct: 285 KGRVEEGIDLLERMKVK-GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFL 343
Query: 438 VFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
+ ++ LC + +QM++ G P ++ + Q ++
Sbjct: 344 SYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
Y +++ + Q + + EV R +K E C + Y ++ A + + A+
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + PS F+ ++N L S K DE + + G + N ++ C S
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
++ A +++DE Q PN T+ ++ +EA+ + RM E EP T++
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER-IEPDTITFN 276
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
I++ + R++ + + ++M+ +G P + ++ L + A + QM+
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 466 GIRP 469
G+RP
Sbjct: 337 GMRP 340
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNMMPSPHIFSTLINGLGS-DKRLDE 313
++P Y ++IN + +AK YDE ++ EK S F L+ G+ R++
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINR 150
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
A+E G P + ++N ++ + D+ +++ + GV ++ +I++
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 374 HLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGIL 433
L ++ + A + + P V T+ ++R FC++ + + + ++M I
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
P F +LIS L +++ ++M G P + + L+D
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A++ ++ + +P V F+ L+ C E+A +L ++M + PD ++ I
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G ++ + ++ MK + EP+ TY ++ K+ EA +M
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M PS + ++ GL K + E + +GF P+T + VV S DD+
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV-SKNNDDSQ 396
Query: 351 RVVDEMKQC 359
+D + C
Sbjct: 397 ANLDRITAC 405
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 177/445 (39%), Gaps = 43/445 (9%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI-RQFKVIWNLVEDMKQRKLLTRD 156
S A + L+FF W KQ + H +F ++ + K+ R++ I ++E +K +
Sbjct: 49 SPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKP 108
Query: 157 TXXXXXXXXXXXXKVKE-AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
+ + A+E + M +G P N ++DV K V A E+F+
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQ---NLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
+R R S+ I L + + +L+ V V + M E F P+ +G ++ C+
Sbjct: 169 IRFRNFF----SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
EA M + S +++S L++G +A++ + K G +P T
Sbjct: 225 TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVT 284
Query: 333 YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMS 392
Y +++ + +D+A+ V+ +++ G+ P+ ++++H + +EA VF +
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE 344
Query: 393 SEMGCEPTVSTYDIILRLFCDEERLDM--------------------------------E 420
P T+ IL C + D+
Sbjct: 345 KRK-LVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYA 403
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQA 480
+ V M + + + V +SALC AA K ++ ++ A+ S + +
Sbjct: 404 LKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
Query: 481 LIDAGMETTAIHFALKIDKLRKTPL 505
LI+ G TA+H K L K PL
Sbjct: 464 LIELGKYNTAVHL-FKRCILEKYPL 487
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA K++ GL P++ N ++ + E+A+++F + R LVPD ++
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 231 LLE----------------GWSQQQNLLRVN----------------EVCREMKCECFEP 258
+L G +L+ N +V M + F
Sbjct: 358 ILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D TY + ++A C+ A+ Y + ++ H S +I+ L + + A+ +
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKA 378
++ + + +Y + + R+++AY + +MK+ G+ PN RTY I+ L K
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Query: 379 RTTQEAYSVFRRMSSE 394
+ T++ + R E
Sbjct: 538 KETEKVRKILRECIQE 553
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 186/462 (40%), Gaps = 53/462 (11%)
Query: 82 SVEVSPELVAEVLNKLSN--AGVLALSFFHWAEKQKGFKHSTESF----HALIEALGKIR 135
S+++S L+ +L + N ALSFFHW+ + +H +S+ H L++A I
Sbjct: 72 SIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLID 131
Query: 136 QFKVI----------WNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE---AVETFEKME 182
+I +LV+ + ++ T K++ + F+++
Sbjct: 132 ARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLC 191
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
G V N L+ KSK + +++ + + P+ + I+++ ++ L
Sbjct: 192 DCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLK 251
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
V ++ + + P V+ L+ + + +E++ + KNM+ +S ++
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV 311
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
+ L A + +++ GF+ + Y V C + +A R++ EM++ GV
Sbjct: 312 YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 363 PNSRTYDIILH---------------HLIKARTTQEAYSVFRRM---------------- 391
P T++ ++ ++ R + S F M
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 392 ---SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
S + G P TY ++R F + +D + ++ +M R + PG VF LI LC
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT 491
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
K++A KY + M I P A+++ L +A G +T A
Sbjct: 492 CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNA 533
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
VKEA +ME+ G+ P FN L+ + EK E + M RGL+P ++
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++ S+ +N+ R NE+ + + F PD TY LI + + D+A+ ++EM+ +
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P +F +LI GL + +++ ++ + K P Y+A++ A+ +A
Sbjct: 475 MSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNAD 534
Query: 351 RVVDEM 356
RV +EM
Sbjct: 535 RVYNEM 540
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 172 KEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
KEA + +M K YG++P++ +N+++ VLC+S S + + +M + + P S+ +
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G+ +++ V +V R M V TY I+I CK KK EA +
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
M P+ +S LI+G S++ LDEA+ +E NG+ P++ Y ++ C
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXK 170
K G + E+++ +I L + +++V +M +RK + T + K
Sbjct: 174 KMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM-ERKWIKPTAASFGLMIDGFYKEEK 232
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
E + M+++G+ V+ +N ++ LCK K +A+ L D + + P+ +Y++
Sbjct: 233 FDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL 292
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ ++NL + M C ++PD Y LI+ CK ++ A+ E EKN
Sbjct: 293 LIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFY----EKFKAN 324
+PS + L+NGL S ++DEA E EKF N
Sbjct: 353 WVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRN 390
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEPDV 260
++ ++++ + F + + +KS LL ++ N V EM K EPD+
Sbjct: 123 RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDL 182
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
TY +I C++ + EM+ K + P+ F +I+G +++ DE +
Sbjct: 183 ETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRM 242
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
G TYN ++ C + +A ++D + C + PNS TY +++H
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
EA ++F M G +P Y ++ C + + + + + +P V
Sbjct: 303 LDEAMNLFEVMVCN-GYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMK 361
Query: 441 VLISALCHANKLDAA 455
L++ L +K+D A
Sbjct: 362 WLVNGLASRSKVDEA 376
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 7/314 (2%)
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS----YTILLEGWSQQQ 239
+ LK S K D L KS + + R L PD +++ + ++++
Sbjct: 30 FTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREK 89
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGI-LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + V+++ +P ++ + I Y +A D ++ + +++ + +
Sbjct: 90 HFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSL 149
Query: 299 STLINGLGSDKRLDEALEFY-EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ L+ K EA Y E K G P+ TYN ++ C S +Y +V EM+
Sbjct: 150 NALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEME 209
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERL 417
+ + P + ++ +++ K E V R M E G V+TY+I+++ C ++
Sbjct: 210 RKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR-MMDEFGVHVGVATYNIMIQCLCKRKKS 268
Query: 418 DMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
A+ D + + + P + +LI C LD A F+ M+ G +P + + TL
Sbjct: 269 AEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTL 328
Query: 478 KQALIDAGMETTAI 491
L G TA+
Sbjct: 329 IHCLCKGGDFETAL 342
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E E+ G P V +N L++ C + +A++++++M+ RG+V D+ +Y ++ G
Sbjct: 270 EMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSN 329
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+++ E+ R+M + E +TY L+N YCKA D + Y EM+ K
Sbjct: 330 FEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI 389
Query: 299 STLINGLGSDK---RLDEALEFY-EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
L+ GL D+ R+ EA + + + F P Y +V C +MD A +
Sbjct: 390 EALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQA 449
Query: 355 EMKQCGVGPNSRTY 368
EM G P+ TY
Sbjct: 450 EMVGKGFKPSQETY 463
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 131/298 (43%), Gaps = 27/298 (9%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK------------------SVEKAQE 211
++ AV K+ G+ ++S N L+ + + + SV++A++
Sbjct: 177 EIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAY 270
+ K++ P+ ++ ++ + ++ V + REM+ E P+V +Y +L+ AY
Sbjct: 237 MIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAY 291
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C EA + EM+ + ++ ++T+I GL S+ + +A E + G
Sbjct: 292 CARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC 351
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ---EAYSV 387
TY +V YC + +D V EMK+ G + T + ++ L R Q EA +
Sbjct: 352 LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADI 411
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
+ E P+ + Y+++++ C++ ++D + + +M +G P + I
Sbjct: 412 VKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV- 352
+P +F LI K +D A+ K ++ G + T NA++ + Y++
Sbjct: 161 APFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMY 220
Query: 353 ----------VDEMKQC--GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
VDE K+ + PN+ T++ ++ + T+ ++R M E+GC P
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
V +Y++++ +C + VW++M+ RG++ + + +I LC ++ A + F+
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340
Query: 461 QMLDVGIRPPANLFSTLKQALIDAG 485
M GI + L AG
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAG 365
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 148/335 (44%), Gaps = 10/335 (2%)
Query: 174 AVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ FE G L P + + LV LC+ V++ ++L ++ G D Y+ +
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ + L+ REM + DVV+Y ILI+ K +EA+G +M ++ +
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I GL +L+EA + + + G + Y ++ C ++ A+ +
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ +M+Q G+ P+ TY+ +++ L A EA V + G V TY +L +
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK------GVVGDVITYSTLLDSYI 423
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+ +D + + + I + + +L+ A A ++ M ++ + P
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 473 LFSTLKQALIDAGMETTAIHFALKIDKLRKTPLVA 507
++T+ + G A+ ++LRK+ + A
Sbjct: 484 TYATMIKGYCKTGQIEEALEM---FNELRKSSVSA 515
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM--KCECFEPDVVTYGILINA 269
L D +R+ G P ++ L+ + ++ + EV M K + D +I+
Sbjct: 121 LRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 270 YCKAKKYDEAVGFYHEMQEKN-MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+CK K + A+GF+ + ++P+ ++TL++ L ++DE + + + GF
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
+ Y+ + Y + DA EM + G+ + +Y I++ L K +EA +
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 389 RRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
+M E G EP + TY I+R C +L+ +++++ + GI ++ LI +C
Sbjct: 301 GKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR 359
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
L+ A M GI+P ++T+ L AG + A
Sbjct: 360 KGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 49/294 (16%)
Query: 184 YGLKPEVSD-----FNKLVDVLCKSKSVEKAQELFDKMRHRGL------------VPDLK 226
YGL+ SD N + +LCK S E A E++ MR +GL V +L+
Sbjct: 575 YGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 227 S----------------------YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
S YTI++ G ++ L++ +C K + +TY
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
LIN C+ EA+ + ++ ++PS + LI+ L + +A + + +
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
G P YN++V YC + +DA RVV V P++ T ++ K +EA
Sbjct: 755 GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHV 438
SVF + + +++ FC + R++ ARG+L M V
Sbjct: 815 LSVFTEFKDK-NISADFFGFLFLIKGFCTKGRME---------EARGLLREMLV 858
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/440 (18%), Positives = 155/440 (35%), Gaps = 113/440 (25%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ A ME+ G++P + +N +++ LC + V +A E+ +G+V D+ +Y+
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYS 416
Query: 230 ILLEGWSQQQNLLRVNEVCRE----------MKCECF----------------------- 256
LL+ + + QN+ V E+ R + C
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 476
Query: 257 --EPDVVTYGILINAYCKAKKYDEAVGFYHEMQ--------------------------- 287
PD TY +I YCK + +EA+ ++E++
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTAT 536
Query: 288 -------EKNMMPSPHIFSTLINGL---GSDKRL-------------------------- 311
EK + H TL++ + G DK +
Sbjct: 537 EVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLL 596
Query: 312 ------DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP-N 364
+ A+E Y + G P+ ++ ++R DAY +V + + +
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTLSSMD 654
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
Y II++ L K +A ++ S G TY+ ++ C + L + ++
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSR-GVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
D + G++P + +LI LC A K M+ G+ P +++++
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 485 GMETTAIHFALKIDKLRKTP 504
G A+ + R TP
Sbjct: 774 GQTEDAMRVVSRKMMGRVTP 793
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
++N L G L AL+ +A K +G +T ++++LI L + L + ++
Sbjct: 661 IINGLCKEGFLVKALNLCSFA-KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 151 KLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
L+ + T +A + + M GL P + +N +VD CK E A
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+ + + PD + + +++G+ ++ ++ V E K + D + LI
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 270 YCKAKKYDEAVGFYHEM 286
+C + +EA G EM
Sbjct: 840 FCTKGRMEEARGLLREM 856
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 2/326 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+E ++ + K V N ++ L K+ ++ +LFD+M+ GL PD+ +Y
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 231 LLEGWSQQQNLL-RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + +N + E+ E+ + D V YG ++ + +EA F +M+ +
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ + +S+L+N +A E + K+ G P ++ Y D +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ E++ G N Y +++ L KA +EA S+F M + G I++
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK-GVRSDGYANSIMIS 385
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
C +R + + + ++ A C A ++++ + ++M + + P
Sbjct: 386 ALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSP 445
Query: 470 PANLFSTLKQALIDAGMETTAIHFAL 495
N F L + I + A L
Sbjct: 446 DYNTFHILIKYFIKEKLHLLAYQTTL 471
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 130/285 (45%), Gaps = 4/285 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++ ++ FE M+++G K VS ++ + + +K+V KA E++ + ++ +
Sbjct: 115 QDLIQLFEWMQQHG-KISVSTYSSCIKFV-GAKNVSKALEIYQSIPDESTKINVYICNSI 172
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK-YDEAVGFYHEMQEKN 290
L + L ++ +MK + +PDVVTY L+ K K Y +A+ E+
Sbjct: 173 LSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNG 232
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ T++ S+ R +EA F ++ K G +P Y++++ +Y W A
Sbjct: 233 IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
++ EMK G+ PN +L IK + + + S G Y +++
Sbjct: 293 ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA-GYAENEMPYCMLMDG 351
Query: 411 FCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 455
+L+ +++D M+ +G+ + ++ISALC + + A
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 127/276 (46%), Gaps = 4/276 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS-VEKAQELFDKMRHRGLVPDLKSY 228
K+ ++ F++M++ GLKP+V +N L+ K K+ KA EL ++ H G+ D Y
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L + ++MK E P++ Y L+N+Y Y +A EM+
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS 300
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++P+ + +TL+ D + E + ++ G+A Y ++ + ++++
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPT-VSTYDII 407
A + D+MK GV + I++ L +++ +EA + R SE E + + +
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR--DSETTYEKCDLVMLNTM 418
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
L +C ++ M + +M + + P + F +LI
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +EA ++M+ G P + ++ L++ +KA EL +M+ GLVP+ T
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+ + + R E+ E++ + + + Y +L++ KA K +EA + +M+ K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + S +I+ L KR EA E + + N ++ AYC + M+
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
R++ +M + V P+ T+ I++ + IK + AY M S+
Sbjct: 432 MRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSK 476
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 92/217 (42%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+A E +M+ GL P L+ V K ++++EL ++ G + Y +L
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G S+ L + +MK + D I+I+A C++K++ EA + +
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ +T++ ++ + +K +P+ T++ ++ + AY+
Sbjct: 409 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQ 468
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
+M G +++HL K R EA+SV+
Sbjct: 469 TTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVY 505
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 200/515 (38%), Gaps = 84/515 (16%)
Query: 25 PASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE 84
P SL SP+++ + +LR T + A+++ L + S ++ LA +V+
Sbjct: 2 PNSLISRLVSPSLRSQPSKISALRFLTTVSA---AERLYGQL-QGCTSNLEKELASANVQ 57
Query: 85 VSPELVAEVLNKLS-NAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
+ + EVL + N L FF WA +HS + + L KIR +
Sbjct: 58 LDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDIL-KIRAKPDL--- 113
Query: 144 VEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
+K +E++ K E + V ++V LC
Sbjct: 114 ---------------------------IKYVIESYRKEECF---VNVKTM-RIVLTLCNQ 142
Query: 204 KSV-EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
++ ++A + K + D +Y +++ ++ + +L + + +EM C PDV+T
Sbjct: 143 ANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVIT 202
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY---E 319
Y +IN YC A K D+A EM + + + + +S ++ G+ ++ ALE E
Sbjct: 203 YTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME 262
Query: 320 KFKANGF-APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH----- 373
K G +P TY V+ A+C R+++A V+D M G PN T +++
Sbjct: 263 KEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN 322
Query: 374 -------------------------------HLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
LI+ + +EA +FR M G P
Sbjct: 323 DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR-GVRPDGL 381
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGM--HVFFVLISALCHANKLDAACKYFQ 460
+ R C ER ++ ++ + + + + VL+ LC A K +
Sbjct: 382 ACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAK 441
Query: 461 QMLDVGIRPPANLFSTLKQALIDAGMETTAIHFAL 495
MLD +R + + +AL G E F++
Sbjct: 442 SMLDKKMRLKVSHVEKIIEALKKTGDEDLMSRFSI 476
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 143/327 (43%), Gaps = 4/327 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC-KSKSVEKAQELFDKMRHRGLVPDLKSY 228
+++EA+E F K+ + P N L+ VL K +S+E E+ K G+ + ++
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 182
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYD--EAVGFYHEM 286
IL++ + + E+ R M + D Y L+++ CK K + +G+ ++
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 242
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
++ P ++ ++ L R E + + K + P+ Y V+
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
A ++ DE+ G+ P+ TY++ ++ L K + A + M+ ++G EP V TY+I
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMN-KLGSEPNVVTYNI 361
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+++ L +W +M G+ H F ++ISA +++ A ++ ++
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 467 IRPPANLFSTLKQALIDAGMETTAIHF 493
+ ++ + L + G+ A+
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVEL 448
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 131/290 (45%), Gaps = 3/290 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E K + G++ E S F L+D LC+ V+ A EL M ++ D + Y+ LL
Sbjct: 165 EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV 224
Query: 236 SQQQN--LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ V +++ F P + Y +++ + + E V ++M+ + P
Sbjct: 225 CKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEP 284
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ ++ G+ +D+ +A + +++ G AP+ TYN + C ++ A +++
Sbjct: 285 DLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMM 344
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
M + G PN TY+I++ L+KA A ++++ M + G T+DI++ + +
Sbjct: 345 SSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETN-GVNRNSHTFDIMISAYIE 403
Query: 414 EERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ + + ++ + +IS LC +D A + ++
Sbjct: 404 VDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 18/258 (6%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
S ELV E+L K GV + +F LI+AL +I + LV
Sbjct: 159 SLELVPEILVKACRMGV---------------RLEESTFGILIDALCRIGEVDCATELVR 203
Query: 146 DMKQRKLLTRDTXXXXXXXXXXXXKVK---EAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
M Q ++ K + + E + K P + D+ ++ L +
Sbjct: 204 YMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVE 263
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
++ + ++M+ + PDL YTI+L+G ++ + +++ E+ PDV T
Sbjct: 264 GGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYT 323
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y + IN CK + A+ M + P+ ++ LI L L A +++ +
Sbjct: 324 YNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
Query: 323 ANGFAPETPTYNAVVGAY 340
NG + T++ ++ AY
Sbjct: 384 TNGVNRNSHTFDIMISAY 401
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 151/360 (41%), Gaps = 12/360 (3%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
L+ E L K S+ + L F W +KQ+ + + LI +GK Q ++ L +MK
Sbjct: 102 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK 160
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY-----GL---KPEVSDFNKLVDVL 200
R ++ + EK+ Y G+ +P V +N L+
Sbjct: 161 NSG--CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
+S V++ LF + + PD+ ++ +++ + + + + V M+ +PD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+T+ +LI++Y K +++++ + + P+ F+++I G + +D+A ++K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+ P TY ++ Y + + A + +E+ + + T + +L +
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
EA +F +S P STY + + + + + + +M GI+P F
Sbjct: 399 YIEADKLFHN-ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 457
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKN-MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
+L K+ K+ + + + MQ++ +P ++S LI+ +G + A+ + + K
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVV----DEMK---QCGVGPNSRTYDIILHHLI 376
+G P+ YNA++ A+ + A V D+MK +C PN TY+I+L
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ--PNVVTYNILLRAFA 219
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
++ + ++F+ + P V T++ ++ + + AV +MR+ P +
Sbjct: 220 QSGKVDQVNALFKDLDMS-PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
F VLI + + + + F+ ++ +P F+++
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM 319
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN- 324
+IN Y + ++ A + EM E+N + F+ L+N + K+ D +++
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
P+ +YN ++ C +A ++DE++ G+ P+ T++I+LH +E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
++ RM E + + +Y+ L E + + ++++D+++ + P + F +I
Sbjct: 232 EQIWARMV-EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 445 ALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAG 485
KLD A +++++ G RP +F++L A+ AG
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSYTILL 232
A + F++M + K FN L++ SK + + +F ++ + + PD+ SY L+
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G + + + E++ + +PD +T+ IL++ K++E + M EKN+
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++ + GL + + +E + ++K K N P+ T+ A++ + ++D+A
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
E+++ G P ++ +L + KA + AY + + +
Sbjct: 305 YKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+++ L+NA +KK+D G + E+ K ++ P ++TLI GL EA+ +
Sbjct: 142 LSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALID 201
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
+ + G P+ T+N ++ + ++ ++ M + V + R+Y+ L L
Sbjct: 202 EIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMEN 261
Query: 380 TTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVF 439
++E S+F ++ +P V T+ +++ F E +LD + + ++ G P VF
Sbjct: 262 KSEEMVSLFDKLKGNE-LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVF 320
Query: 440 FVLISALCHANKLDAA 455
L+ A+C A L++A
Sbjct: 321 NSLLPAICKAGDLESA 336
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 13/274 (4%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEK------QKGFKHSTESFHALIEALGKIRQFKVIWN 142
VA ++N G+ F A+K ++ K + SF+AL+ A ++F ++
Sbjct: 108 FVARIINLYGRVGM-----FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEG 162
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVL 200
+ +++ + + D K EAV +++E GLKP+ FN L+
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
E+ ++++ +M + + D++SY L G + + + + ++K +PDV
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
T+ +I + K DEA+ +Y E+++ P +F++L+ + L+ A E ++
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
A + VV A + D+A +V+
Sbjct: 343 IFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +E + + +M + +K ++ +N + L E+ LFDK++ L PD+ ++T
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT 286
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + L +E++ P + L+ A CKA + A E+ K
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
++ + +++ L + DEA E E K N +
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ +++M+ G V+ FN ++ CK + +A +F +M G+ P++ S+ ++++G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 236 SQQQNL---LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ ++ L++ M P+ VTY +IN +CKA + D A +M + +
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ + L++ G DEAL ++ + G T YN++V ++ A V
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ +M + + T I++ L + +EA F+R SE + ++ ++ F
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVE-FQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPAN 472
+++L + M +G+ F LI KL+ A + + M+ +
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 473 LFSTLKQALIDAGMETTA 490
+++++ L GM A
Sbjct: 503 IYNSIVNGLSKRGMAGAA 520
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 164/374 (43%), Gaps = 23/374 (6%)
Query: 85 VSPELVA--EVLNKLSNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIW 141
VSP V V+N AG L L+ + K G + ++ AL++A G+
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 142 NLVEDMKQRKLLTRDTXXXXXXX-XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVL 200
L ++M + L+ ++ A+ M ++ + +V L
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
C++ V++A E ++ + LV D+ + L+ + + + L +++ M + D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL------GSDKRLDEA 314
+++G LI+ Y K K + A+ Y M + N + I+++++NGL G+ + + A
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-KQCGVGPNSR-TYDIIL 372
+E + TYN ++ + +++A ++ +M KQ G S T++I++
Sbjct: 527 MEI----------KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+HL K + ++A V + M E G P TY ++ F + + + D + +G+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMV-ERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
Query: 433 LPGMHVFFVLISAL 446
P H++ ++ L
Sbjct: 636 TPHEHIYLSIVRPL 649
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 136/340 (40%), Gaps = 42/340 (12%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G+ + LVD ++ S ++A L D+M +GLV + Y ++ + +
Sbjct: 317 MVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS------ 294
+ V R+M + + D T I++ C+ EAV F ++ EK ++
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 295 --PHI---------------------------FSTLINGLGSDKRLDEALEFYEKFKANG 325
H F TLI+G + +L+ ALE Y+
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAY 385
YN++V A VV+ M+ + TY+ +L+ +K +EA
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEAD 552
Query: 386 SVFRRMSSEMGCEPTVS--TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLI 443
+ +M + G E +VS T++I++ C + V M RG++P + LI
Sbjct: 553 DILSKMQKQDG-EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLI 611
Query: 444 SALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALID 483
++ + + ++ G+ P +++ ++ + L+D
Sbjct: 612 TSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLD 651
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 8/206 (3%)
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
SP +F +L+ + A E E+ +A GF N +G +D ++V
Sbjct: 146 SSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
EM G N T++++++ K EA SVF RM + G P V ++++++ C
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML-KCGVWPNVVSFNMMIDGAC 264
Query: 413 DEERLDMEMAV-----WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
DM A+ M + P + +I+ C A +LD A + M+ G+
Sbjct: 265 KTG--DMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 468 RPPANLFSTLKQALIDAGMETTAIHF 493
+ L A AG A+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRL 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
PDV + L+ A + A + + + S H + + L + +D +
Sbjct: 148 PDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
Y++ + G+ T+N V+ ++C ++ +A V M +CGV PN ++++++ K
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 378 ARTTQEAYSVFRRMSSEMG--CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPG 435
+ A + +M G P TY+ ++ FC RLD+ + M G+
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 436 MHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
+ L+ A A D A + +M G+ +++++
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
ELF +M RGLV + +YT L++G Q + E+ +EM + PD++TY IL++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 271 CK---------AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
CK A K ++ + + K + P+ ++T+I+G +EA + K
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKAR 379
K +G P++ TYN ++ A+ + ++ EM+ C ++ TY ++ L R
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 179
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E F +M + GL + L+ L ++ + AQE+F +M G+ PD+ +Y ILL+G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 235 WSQQQNLLRVNEVCR---------EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
+ L + + + + +P+VVTY +I+ +CK +EA + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
M+E +P ++TLI D + E ++ ++ FA + TY V
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 172
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA---------QELFDKMRHRGLVPD 224
A E F++M G+ P++ +N L+D LCK+ +EKA +LF + +G+ P+
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ +YT ++ G+ ++ + R+MK + PD TY LI A+ + +
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
EM+ + L+ + D RLD+
Sbjct: 155 EMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV++ + F + G+KP V + ++ CK E+A LF KM+ G +PD +Y
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
L+ + + E+ +EM+ F D TYG++ +
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 10/179 (5%)
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
+E + + G T TY ++ + D A + EM GV P+ TY+I+L
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 375 LIK---------ARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWD 425
L K A ++ + +F +S + G +P V TY ++ FC + + ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 426 QMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
+M+ G LP + LI A A+ + ++M A+ + + L D
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 151/360 (41%), Gaps = 12/360 (3%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
L+ E L K S+ + L F W +KQ+ + + LI +GK Q ++ L +MK
Sbjct: 102 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK 160
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY-----GL---KPEVSDFNKLVDVL 200
R ++ + EK+ Y G+ +P V +N L+
Sbjct: 161 NSG--CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
+S V++ LF + + PD+ ++ +++ + + + + V M+ +PD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+T+ +LI++Y K +++++ + + P+ F+++I G + +D+A ++K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+ P TY ++ Y + + A + +E+ + + T + +L +
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
EA +F S+ P STY + + + + + + +M GI+P F
Sbjct: 399 YIEADKLFHNASA-FRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 457
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKN-MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
+L K+ K+ + + + MQ++ +P ++S LI+ +G + A+ + + K
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVV----DEMK---QCGVGPNSRTYDIILHHLI 376
+G P+ YNA++ A+ + A V D+MK +C PN TY+I+L
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ--PNVVTYNILLRAFA 219
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
++ + ++F+ + P V T++ ++ + + AV +MR+ P +
Sbjct: 220 QSGKVDQVNALFKDLDMS-PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
F VLI + + + + F+ ++ +P F+++
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSM 319
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 150/355 (42%), Gaps = 38/355 (10%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KG S+E + LI A + R+ + L ++ +KLL
Sbjct: 275 KDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLK------------------ 316
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
PE+ K+V + + ++E E+ MR L ++
Sbjct: 317 --------------DPEMC--LKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIV 360
Query: 233 EGWSQQQNLLRVNEVCR-EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G+S+Q+ +V MK EC E VTY I INAYC+ +KY++A + EM +K
Sbjct: 361 NGFSKQRGFAEAVKVYEWAMKEEC-EAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF 419
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+S +++ G +RL +A+ K K G P YN+++ + +M + A +
Sbjct: 420 DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEK 479
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ EMK+ V P+ +Y ++ +++ + +++ G + + I++ +F
Sbjct: 480 IWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG-KIDRAMAGIMVGVF 538
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
R+D M + M+ G ++ ++AL A L++ ++ Q+ D
Sbjct: 539 SKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG-LNSQIRWLQESFDAA 592
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ G+KP F+ ++ LC+ ++V+ A+ L M +G P + +++ S+ +L
Sbjct: 369 RRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
EV + M+ +PDV TY ++I+ Y K DEA E ++K+ SP + LI
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW-SMRMDDAYRVVDEMKQCGV 361
G + DEAL+ + G P YN ++ ++C ++ + A + +EMKQ G+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Query: 362 GPNSRTYDII 371
N+ + +I
Sbjct: 545 HLNAISQGLI 554
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 185/456 (40%), Gaps = 58/456 (12%)
Query: 60 DKICKILS--KSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+K+ +LS +S +++ L L+V++ + V V +G + F WA + +
Sbjct: 128 EKLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLKWATQNEEI 187
Query: 118 KHSTESFHALIEALGK-IRQFKV--IWNLVEDMKQRK---LLTRDTXXXXXXXXXXXXKV 171
+T +L+ A+ R+ +W+LV+++ +++ +L + K
Sbjct: 188 TVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKS 247
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A + F K E++G P + ++ LCK ++ A + +KM G +L
Sbjct: 248 KAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG---------VL 298
Query: 232 LEGWSQQQNLLRVNEVCREMKCE--------------CFEPDVVTYGILINAYCKAKKYD 277
EG Q N+ + C+E K E P V LI A CK D
Sbjct: 299 SEG-EQMGNI--ITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKN---D 350
Query: 278 EAVGFYHEM--------QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+ F EM + + + P FS +I+ L + + +A + G AP
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPG 406
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFR 389
+N VV A + +D+A V+ M+ G+ P+ TY +I+ K EA +
Sbjct: 407 NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 390 RMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC-H 448
+ V TY ++R +C E D + + ++M G+ P + LI + C
Sbjct: 467 EAKKKHKKLSPV-TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDA 484
A + A F++M G+ + + Q LI A
Sbjct: 526 ALDWEKAEVLFEEMKQKGLH-----LNAISQGLIRA 556
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 21/309 (6%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F M+ K VS +N L+ L + K + +A ELF+KM + D+ S+T ++
Sbjct: 328 EAKAVFGVMKN---KDSVS-WNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMI 379
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+S + + + C E+ E D +T+ +I+A+ Y+EA+ ++H+M +K +
Sbjct: 380 KGFSGKGEISK----CVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ + FS++++ S L E L+ + + + N++V YC +DAY++
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
C PN +Y+ ++ ++A +F + S G EP T+ +L
Sbjct: 496 F----SCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS-GKEPNGVTFLALLSACV 550
Query: 413 DEERLDMEMAVWDQMRAR-GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPA 471
+D+ + M++ I PG + ++ L + LD A M +P +
Sbjct: 551 HVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM---PCKPHS 607
Query: 472 NLFSTLKQA 480
++ +L A
Sbjct: 608 GVWGSLLSA 616
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 2/260 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE-LFDKMRHRGLVPDLKSYTI 230
K+A++TF M+ YG K V FN + VL + + E L D G+ D S+ I
Sbjct: 123 KQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNI 182
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + L REM+ PDVVTY LI+A K ++ G ++ M K
Sbjct: 183 AIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKG 242
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ F+ I L + +R +A + P++ TYN V+ + + D A
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAE 302
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
RV M G PN + Y ++H+L KA AY++ + + P + T +++L+
Sbjct: 303 RVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK-KWYPNLDTVEMLLKG 361
Query: 411 FCDEERLDMEMAVWDQMRAR 430
+ +LD ++ + + R
Sbjct: 362 LVKKGQLDQAKSIMELVHRR 381
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 2/241 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX--XXXKVKE 173
G K S +SF+A ++ L IW + D + + D +
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +MEK GL P+V + L+ L K + L++ M +G P+L ++ + ++
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ N++ M EPD +TY ++I + A+ D A Y M K P
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ I+ T+I+ L D A + + P T ++ ++D A ++
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
Query: 354 D 354
+
Sbjct: 376 E 376
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 10/267 (3%)
Query: 128 IEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGL 186
++ L K ++F I L+E K K+ T A++ FE+M+K G
Sbjct: 74 VQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKM--RHRGLVPDLKSYTILLEGWSQQQNLLRV 244
V FN L+ S E+ +LFD+ R+ + PD SY +L++ + +
Sbjct: 134 PRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKA 193
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST-LIN 303
E+ R+M+ + E ++ + ++ + K DEA + EM K +++ L+N
Sbjct: 194 MEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN 253
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
+ + + E E+ + G P+T +YN ++ AYC M +A +V + ++Q P
Sbjct: 254 --AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----P 307
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRR 390
N+ T+ ++ HL + +VF++
Sbjct: 308 NAATFRTLIFHLCINGLYDQGLTVFKK 334
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E + + P+ + +V + +++A+++ +M G+ + +Y +LL+G
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 235 WSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q + R ++ REM + EPDVV+Y I+I+ A+ F++EM+ + + P
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAP 556
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++TL+ + A +++ + + +N +V YC ++DA RV
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRV 616
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
V MK+ G PN TY + + + +AR +A +++ +
Sbjct: 617 VSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN---GFAPETPTYNAVVGAYCWSMR 345
K P I++TL+ G + R+ + E + P+ TY VV A+ +
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
MD A +V+ EM + GV N TY+++L K A + R M+ + G EP V +Y+
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 406 IILR--LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
II+ + D+ +A +++MR RGI P + L+ A + + A + F +M+
Sbjct: 528 IIIDGCILIDDSA--GALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Query: 464 D 464
+
Sbjct: 586 N 586
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 140/350 (40%), Gaps = 18/350 (5%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-----KLLTRDTXXXXXXXXXXXX 169
KG K + H+L+ A + +V+ M+++ K+L
Sbjct: 300 KGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEA 359
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK--SKSVEKAQE--LFDKMRHRGLVPDL 225
+ E ++ Y + EVS+ +VDV K SV+ + E L K+ PD
Sbjct: 360 EDDEDAFEDDEDSGYSARDEVSE-EGVVDVFKKLLPNSVDPSGEPPLLPKV----FAPDS 414
Query: 226 KSYTILLEGWSQQ---QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ YT L++G+ + + R+ E R PD VTY +++A+ A D A
Sbjct: 415 RIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQV 474
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYC 341
EM + + ++ L+ G ++D A + + + G P+ +YN ++
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTV 401
A +EM+ G+ P +Y ++ + + A VF M ++ + +
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 402 STYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANK 451
+++++ +C ++ V +M+ G P + + L + + A K
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E E G++P+V +N ++D A F++MR RG+ P SYT L++ ++
Sbjct: 512 EMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
Query: 239 QNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
N V EM + + D++ + +L+ YC+ ++A M+E P+
Sbjct: 572 GQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVAT 631
Query: 298 FSTLINGLGSDKRLDEALEFYEKFK 322
+ +L NG+ ++ +AL +++ K
Sbjct: 632 YGSLANGVSQARKPGDALLLWKEIK 656
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILL 232
A+ F +M G+ P + L+ S + A +FD+M + V DL ++ +L+
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
EG+ + + V MK F P+V TYG L N +A+K +A+ + E++E+
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA F + GL+P+V +N ++ + S+ +A++L+ +M RGLVPD +Y
Sbjct: 29 KFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYN 84
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G +Q L + +V + C T+ LIN YCKA + + + + EM +
Sbjct: 85 SMIHGLCKQNKLAQARKVSKS--CS-------TFNTLINGYCKATRVKDGMNLFCEMYRR 135
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
++ + ++TLI+G + AL+ +++ +NG + T+ ++ C
Sbjct: 136 GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F+ M + + + + +N ++ LCK+ ++A +F + GL PD+++Y +++ S
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS- 60
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
L R ++ EM PD +TY +I+ CK K +A + + S
Sbjct: 61 ---LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCST 108
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+TLING R+ + + + + G TY ++ + + A + EM
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS 393
GV +S T+ IL L + ++A ++ + SS
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSS 204
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
+F MR + D Y I++ G + + + +PDV TY ++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
+ A Y EM + ++P ++++I+GL +L +A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
T+N ++ YC + R+ D + EM + G+ N TY ++H + A +F+ M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 392 SSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
S G + T+ IL C + L +A+ Q
Sbjct: 168 VSN-GVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ M+E NM ++ +I+GL + DEA + +G P+ TYN ++
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVS 402
+ A ++ EM + G+ P++ TY+ ++H L K +A V + S
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKSCS 107
Query: 403 TYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
T++ ++ +C R+ M ++ +M RGI+ + + LI + A FQ+M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 463 LDVGIRPPANLF 474
+ G+ + F
Sbjct: 168 VSNGVYSSSITF 179
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P +TY +I+ +CK + D+A M K P FSTLING KR+D +E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ + G T TY ++ +C +D A +++EM CGV P+ T+ +L L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 378 ARTTQEAYSVFRRM 391
+ ++A+++ +
Sbjct: 128 KKELRKAFAILEDL 141
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M ++ + P +N ++D CK V+ A+ + D M +G
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC------------------- 41
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
PDVVT+ LIN YCKAK+ D + + EM + ++ + ++T
Sbjct: 42 ----------------SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
LI+G LD A + + + G AP+ T++ ++ C + A+ +++++++
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A + M G P+V F+ L++ CK+K V+ E+F +M RG+V + +YT
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ G+ Q +L ++ EM PD +T+ ++ C K+ +A ++Q+
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSV 387
P T TYN+++ +C R+DDA R++D M G P+ T+ +++ KA+ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 388 FRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALC 447
F M G TY ++ FC LD + ++M + G+ P F +++ LC
Sbjct: 68 FCEMHRR-GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 448 HANKLDAA 455
+L A
Sbjct: 127 SKKELRKA 134
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
P + TY+ ++ K +A + M+S+ GC P V T+ ++ +C +R+D M
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
++ +M RGI+ + LI C LDAA +M+ G+ P F + L
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P+ ++++I+G R+D+A + + G +P+ T++ ++ YC + R+D+
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+ EM + G+ N+ TY ++H + A + M S G P T+ +L
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS-CGVAPDYITFHCMLA 123
Query: 410 LFCDEERLDMEMAVWDQMR 428
C ++ L A+ + ++
Sbjct: 124 GLCSKKELRKAFAILEDLQ 142
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSYTILL 232
A + FE+M K V FN L+ SK + +ELF+++ + + PD+ SY L+
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYG-ILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ ++ +L + E++ + +PD+VT+ +L+++Y K +++ + +M EKN+
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKG-QFELGEEIWAKMVEKNV 246
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
++ + GL ++ + E + + + KA+G P+ ++NA++ +MD+A
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSE 394
E+ + G P+ T+ ++L + KA + A +F+ S+
Sbjct: 307 WYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
R+M E F +++ Y KA ++ A + EM ++ S F+ L++
Sbjct: 104 RDMSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS 157
Query: 309 KRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
K+ D E + + P+ +YN ++ A C + +A ++DE++ G+ P+ T
Sbjct: 158 KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVT 217
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
++ +L + ++ +M E + TY+ L +E + + ++ ++
Sbjct: 218 FNTLLLSSYLKGQFELGEEIWAKMV-EKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
+A G+ P + F +I + K+D A ++++++ G RP F+ L A+ AG
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 488 TTAIHF 493
+AI
Sbjct: 337 ESAIEL 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAV 175
K S SF+AL+ A ++F V+ L ++ + + D K + EAV
Sbjct: 141 KRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAV 200
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+++E GLKP++ FN L+ E +E++ KM + + D+++Y L G
Sbjct: 201 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 260
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + + E+K +PDV ++ +I K DEA +Y E+ + P
Sbjct: 261 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 320
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
F+ L+ + + A+E +++ + + T +V + ++A +V
Sbjct: 321 ATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 27/318 (8%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+E + K +KP + N L++V S + +++ M+ + D+ SY ILL+
Sbjct: 290 YEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCL 347
Query: 238 QQNLLRVNEVCREMK----CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ +E K + D TY +I + AK + A+ +M+ + P
Sbjct: 348 AGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTP 407
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ H +S+LI+ + +++A +E+ A+G P + +N ++ A + + D A+R+
Sbjct: 408 NTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLF 467
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTT---------------QEAYSVFRRMSSEMGCE 398
K V + DI+ K RT+ + + S + + S +
Sbjct: 468 QSWKGSSVNESLYADDIV----SKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFK 523
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKY 458
PT +TY+I+L+ + E+ D+M++ G+ P + LI + ++ A +
Sbjct: 524 PTTATYNILLKACGTDYYRGKELM--DEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 459 FQQMLDVGIRPPANLFST 476
+ M G RP ++T
Sbjct: 582 LRTMHSAGTRPDVVAYTT 599
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 195/482 (40%), Gaps = 76/482 (15%)
Query: 14 FSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTP---HADKICKILSKSP 70
F+ LP S P S +P S S T L + S +R IP +AD K+
Sbjct: 41 FTKLLP-SLPQQHSPSPASVSATHSLSSHFSNVVR---WIPDGSLEYYADFASKLAE--- 93
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLAL-SFFHWAEKQKGFKHSTES--FHAL 127
D + D++ L+AE L S A V S + KG + ++
Sbjct: 94 ----DGRIEDVA------LIAETLAAESGANVARFASMVDYDLLSKGISSNLRQGKIESV 143
Query: 128 IEALGKIRQFKVI-WNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGL 186
+ L +I + + +LV+D KL+ + +V++A++ E + G
Sbjct: 144 VYTLKRIEKVGIAPLDLVDD-SSVKLMRKQ-----FRAMANSVQVEKAIDLMEILAGLGF 197
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI-LLEGWSQQQNLLRV- 244
K +LVD KS + +R+ L+P + ++ G+ ++ +++ V
Sbjct: 198 K-----IKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGDMVSVM 252
Query: 245 --NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
E C+++ P++ +I+ Y ++ Y ++ ++N+ P+ ++ ++L+
Sbjct: 253 TAYEACKQI---LDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLM 309
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
N D L L+ Y+ + + +YN ++ C + R+D A
Sbjct: 310 NVNSHD--LGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLA------------- 354
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMA 422
Q+ Y +RM S + TY I+++F D + +
Sbjct: 355 -------------------QDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALK 395
Query: 423 VWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALI 482
V D M++ G+ P H + LISA +A ++ A F++ML G P + F+ L A +
Sbjct: 396 VKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACV 455
Query: 483 DA 484
+A
Sbjct: 456 EA 457
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 18/222 (8%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A FE+M G +P FN L+ ++ ++A LF + + L + I
Sbjct: 425 VEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDI 484
Query: 231 LLEGWSQQQNLLRVNE------------VCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+ +G + N+L+ N + K CF+P TY IL+ A C Y
Sbjct: 485 VSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY-R 542
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
EM+ + P+ +STLI+ G ++ A+ + G P+ Y +
Sbjct: 543 GKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK 602
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKART 380
+ + A+ + +EM++ + PN TY+ L+KAR+
Sbjct: 603 ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT----LLKARS 640
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E ++M+ GL P ++ L+D+ S VE A + M G PD+ +YT ++
Sbjct: 545 ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC 604
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINA---YCKAKKYDEAVGFYHEMQEKNMM 292
++ + L + EM+ +P+ VTY L+ A Y + + + Y +M+
Sbjct: 605 AENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYK 664
Query: 293 PSPHIFSTLI----------NGLGSDKRLDE 313
P+ H LI NG DK D+
Sbjct: 665 PNDHFLKELIEEWCEGVIQENGQSQDKISDQ 695
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 137/342 (40%), Gaps = 37/342 (10%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRK--LLTRDTXXXXXXXXXXXXKVKEAVETFEK 180
+F A +E L + + F + NL++ + + L + + ++ F
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 141
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+EK+ + V N L+ +K ++A+ ++ +M K Y I
Sbjct: 142 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMP--------KMYGI---------- 183
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
EPD+ TY +I +C++ + EM+ K + P+ F
Sbjct: 184 ----------------EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G ++ + DE + K G TYN + + C + +A ++D M G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDME 420
+ PN+ TY ++H +EA +F+ M + GC+P Y ++ C +
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR-GCKPDSECYFTLIYYLCKGGDFETA 346
Query: 421 MAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+++ + + +P + L++ L +K++ A + Q+
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K E + M+ G+ VS +N + LCK K ++A+ L D M G+ P+ +Y+
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + ++ + M +PD Y LI CK ++ A+ E EK
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
N +PS I +L+NGL D +++EA E + K F +N V A
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWNEVEAA 405
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 2/225 (0%)
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY-EKFKANGFAP 328
Y +A D ++ + ++++ + + + L+ K EA Y E K G P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVF 388
+ TYN ++ +C S +Y +V EM++ G+ PNS ++ +++ + E V
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 389 RRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCH 448
M + G VSTY+I ++ C ++ A+ D M + G+ P + LI C+
Sbjct: 246 AMMK-DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 449 ANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
+ + A K F+ M++ G +P + + TL L G TA+
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 17/298 (5%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLV---PDLKS-----YTILLEGWSQQQNLLRV 244
F+ V+ L + K L D G + PDLKS + I+L ++Q L
Sbjct: 83 FSAAVENLAEKKHFSAVSNLLD-----GFIENRPDLKSERFAAHAIVL--YAQANMLDHS 135
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSPHIFSTLIN 303
V R+++ V + L+ A AK Y EA Y EM + + P ++ +I
Sbjct: 136 LRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIK 195
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
+ + + G P + ++ ++ + + D+ +V+ MK GV
Sbjct: 196 VFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNI 255
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAV 423
TY+I + L K + ++EA ++ M S G +P TY ++ FC+E+ + +
Sbjct: 256 GVSTYNIRIQSLCKRKKSKEAKALLDGMLS-AGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 424 WDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ M RG P +F LI LC + A ++ ++ P ++ +L L
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 147/328 (44%), Gaps = 8/328 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EAVE ++MEK G+ P + +N L+ + + A +L KM G+ D+ ++T
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G + ++ R+M P+ VT ++A K ++ + +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++L++ +L++A + ++ K + T+N+++ YC + A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKA 437
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
Y + M+ + PN T++ ++ IK EA +F+RM + + +T+++I+
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ + D + ++ +M+ +P L+ A AN L A K +++ +R
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC--ANLLGA--KMVREIHGCVLRR 553
Query: 470 PANLFSTLKQALIDAGMETTAIHFALKI 497
+ +K AL D ++ I ++ I
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTI 581
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 151/357 (42%), Gaps = 12/357 (3%)
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
+ + M++R L T + +E + F M K G+ P+ F K++
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSREN---RWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
VE + + + G+ L+ +L +++ L + R M+ E DV+
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIA 249
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ ++ AYC+ K++EAV EM+++ + P ++ LI G + D A++ +K +
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
G + T+ A++ + A + +M GV PN+ T + +
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
+ V ++ +MG V + ++ ++ +L+ V+D ++ + + + + +
Sbjct: 370 QGSEV-HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSM 424
Query: 443 ISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDK 499
I+ C A A + F +M D +RP ++T+ I G E A+ +++K
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 12/295 (4%)
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
D LC++ S+ +A++ D + +G +Y LLE + + + + E
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGS-IHLGRILHARFGLFTE 112
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
PDV L++ Y K +A + M+E+N+ +S +I + R E +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFT----WSAMIGAYSRENRWREVAKL 168
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK-QCGVGPNSRTYDIILHHLI 376
+ +G P+ + ++ C + +A +V+ + + G+ R + IL
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQG-CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
K A FRRM E V ++ +L +C + + + + +M GI PG+
Sbjct: 228 KCGELDFATKFFRRMR-----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGL 282
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAI 491
+ +LI K DAA Q+M GI ++ + LI GM A+
Sbjct: 283 VTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 140/339 (41%), Gaps = 52/339 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A + F+ ++ +V +N ++ C++ KA ELF +M+ L P++ ++
Sbjct: 402 KLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++ G+ + + ++ + M+ + + + T+ ++I Y + K DEA+ + +MQ
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 289 KNMMPSPHIFSTLI----NGLGSD----------KRLDEALEFYEKFKANGFAP------ 328
MP+ +L+ N LG+ +R +A+ + + +A
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 329 -----------ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY-DIILHHLI 376
+ T+N+++G Y A + ++MK G+ PN T IIL H +
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 377 KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGM 436
E VF ++++ P + ++ L+ RL+ + +M + P
Sbjct: 638 MG-NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIW 696
Query: 437 HVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFS 475
F L H + +D+ I NLFS
Sbjct: 697 ESF--LTGCRIHGD------------IDMAIHAAENLFS 721
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 1/310 (0%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P S ++D + +E A LF + +G P + +IL+ + + +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
R + E D V Y LI A +A K A Y M + S ++T+I+ G
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+LD+A+E + + +G + Y ++ Y +M +A + EM++ G+ P + +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 368 YDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
Y++++ +R E + + M C +STY +++++ + + +
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERNGRC-TDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
+ +GI F L+SAL A ++ A + + +M + GI P + T+ + + G
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDA 1000
Query: 488 TTAIHFALKI 497
I F K+
Sbjct: 1001 EKGILFYEKM 1010
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
F + VL + + + ++ F M+ P + YTI+L + Q + E EM
Sbjct: 155 FRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEM 214
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
EPD V G ++ Y + ++ + FY +QE+ ++ S +++ +++ L
Sbjct: 215 LEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFH 274
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+ ++ + + G P TY VV +Y ++A + EMK G P TY +
Sbjct: 275 GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Query: 372 LHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARG 431
+ +KA ++A ++ M S+ G P+ T +L L+ E ++++ M R
Sbjct: 335 ISLSVKAGDWEKAIGLYEDMRSQ-GIVPSNYTCATMLSLYYKTENYPKALSLFADME-RN 392
Query: 432 ILPGMHVFFVLI 443
+P V LI
Sbjct: 393 KIPADEVIRGLI 404
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 93/222 (41%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++ A E +E+M G+ + +N ++ V + ++KA E+F R GL D K YT
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + + + EM+ + +P +Y +++ ++ + E M+
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ TLI + EA + K G +++++ A + M++A
Sbjct: 909 GRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEA 968
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
R +M + G+ P+S IL + ++ + +M
Sbjct: 969 ERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX 166
FF W + Q ++ S + ++ G++ + K+ +M +
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTY 233
Query: 167 XXXKVKEAVETFEK-MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
A+ TF K +++ + S +N ++ L K K +L+ +M G+ P+
Sbjct: 234 ARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE 293
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
+YT+++ +++Q + EMK F P+ VTY +I+ KA +++A+G Y +
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+ + ++PS + +T+++ + +AL + + N + ++ Y
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGL 413
Query: 346 MDDAYRVVDEMKQCGVGPNSRTY 368
DA + +E ++ + + +TY
Sbjct: 414 FHDAQSMFEETERLNLLADEKTY 436
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA++ F +M+ G PE ++ ++ + K+ EKA L++ MR +G+VP + +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + + +N + + +M+ D V G++I Y K + +A + E + N+
Sbjct: 370 LSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNL 429
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + + + + +AL+ E K Y ++ Y +D A
Sbjct: 430 LADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEE 489
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ + G+ P++ + + +L+ + ++A +++ + + Y +R++
Sbjct: 490 AFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ-VHFDIELYKTAMRVY 547
Query: 412 CDE 414
C E
Sbjct: 548 CKE 550
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 21/282 (7%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A +MEK G+KP+ +N L EKA ++ KM+ +G+ P++ S+T
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-- 288
+ G S+ N +V +M+ E P+ T L+ K + H +E
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL-------KILGCLSLLHSGKEVH 419
Query: 289 -----KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
KN++ ++ + L++ G L A+E + K A ++N ++ Y
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMF 475
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVST 403
R ++ M + G+ P++ T+ +L + QE + F M S G PT+
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISA 445
++ L LD WD ++ + P ++ +S+
Sbjct: 536 CSCMVDLLGRSGYLD---EAWDFIQTMSLKPDATIWGAFLSS 574
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+ ++ME GLKP++ +N L+ + A + +M+ GL P S +
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+ ++ +L + + DV LI+ Y K A + M KN
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++ +++L++GL L +A + + G P+ T+N++ Y + + A
Sbjct: 291 IVA----WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 351 RVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRL 410
V+ +MK+ GV PN ++ I K + A VF +M E G P +T +L++
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKI 405
Query: 411 F 411
Sbjct: 406 L 406
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 9/286 (3%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N LV L + ++ A+ L +M G+ PD ++ L G++ + +V +MK
Sbjct: 294 WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ P+VV++ + + K + A+ + +MQE+ + P+ STL+ LG L
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
E + + A+V Y S + A + +K + +++ +L
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCML 469
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR-G 431
+E + F M E G EP T+ +L + + + +D MR+R G
Sbjct: 470 MGYAMFGRGEEGIAAFSVM-LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 432 ILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTL 477
I+P + ++ L + LD A + Q M ++P A ++
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAF 571
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 145/341 (42%), Gaps = 36/341 (10%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++AVE F +M+ G K S KL+ V + + +++ + GL ++ L
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +S+ L +V MK + ++ ++ ++++Y K D+A+G EM+ +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA------------ 339
P +++L++G S +A+ ++ + G P T + ++++ A
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 340 -YCWSMRMDDAYRV------VDEMKQCGVGPNSR------------TYDIILHHLIKART 380
+ + +R Y V +D + G P +R ++ ++ L A
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 381 TQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
++A ++ RM E G +P T++ + + + + + V +M+ +G+ P + +
Sbjct: 307 LKDAEALMIRMEKE-GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQAL 481
+ S A K F +M + G+ P A STL + L
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 136/319 (42%), Gaps = 19/319 (5%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N++V V +S + EKA ELF +M+ G + LL+ S ++ ++ +
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
E +V LI Y + K + + ++ M+++N+ I S+ LG +D
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK-LG---YVD 172
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A+ ++ + G P+ T+N+++ Y DA V+ M+ G+ P++ + +L
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLL 232
Query: 373 HHL-----IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
+ +K Y + ++ ++ E T ++ ++ L V+D M
Sbjct: 233 QAVAEPGHLKLGKAIHGYILRNQLWYDVYVETT------LIDMYIKTGYLPYARMVFDMM 286
Query: 428 RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGME 487
A+ I+ + L+S L +A L A +M GI+P A +++L G
Sbjct: 287 DAKNIVA----WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 488 TTAIHFALKIDKLRKTPLV 506
A+ K+ + P V
Sbjct: 343 EKALDVIGKMKEKGVAPNV 361
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 22/304 (7%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 124 SKFHETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 182
Query: 132 GKIRQFKVIWNLVED-MKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKM---EKYGLK 187
G + ++ + ++V + R + + K+ AV F M + +
Sbjct: 183 GAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECR 242
Query: 188 PEVSDFNKLVDVLCKSKS--------VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
P + ++ L L + +E + LF +M G+ PD+ + L++G+
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS- 301
Query: 240 NLLRVNEVCR-----EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
L VN+ R + +C EP+ TY LI+ C + A EM+ K +P+
Sbjct: 302 --LHVNDALRIFHQMSVVYDC-EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+++L+N +D+A++ + NG + +Y +V C + D+A R+++
Sbjct: 359 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Query: 355 EMKQ 358
+++
Sbjct: 419 MLRE 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 171 VKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V +A+ F +M Y +P ++ L+ LC A+EL +M+ +G VP+ KSY
Sbjct: 304 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 363
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ ++ + + EM D ++Y L++ C+ KYDEA ++EK
Sbjct: 364 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 290 NMMPSPHIFSTLINGLGSD 308
++ + L+N L D
Sbjct: 424 QLVDRDS-YDKLVNVLHKD 441
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F + +Y I I AK Y E +++ + + ++++++I +L A+
Sbjct: 168 FTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAV 227
Query: 316 EFYEKFKANGFAPETPT-------YNAVVG----AYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + PT + A++G +Y + M+ + +M G+ P+
Sbjct: 228 NIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPD 287
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVW 424
+ ++ + + +A +F +MS CEP TYD ++ C + R +
Sbjct: 288 VFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELL 347
Query: 425 DQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
+M+ +G +P + L++A + ++D A K +M++ G
Sbjct: 348 SEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 161/345 (46%), Gaps = 29/345 (8%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
S++ +I+ + + L ++M +R +++ ++ ++ EA+ FE+M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRG---RIDEAMNLFERMP 198
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ +V + +VD L K+ V++A+ LFD M R ++ S+ ++ G++Q +
Sbjct: 199 R----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRID 250
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+++ + M E D ++ +I + + ++ ++A G + M EKN++ ++T+I
Sbjct: 251 EADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS----WTTMI 302
Query: 303 NGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDAYRVVD--EMKQC 359
G +K +EAL + K +G P TY +++ A C D +V+ ++ Q
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA-C-----SDLAGLVEGQQIHQL 356
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRM-SSEMGCEPTVSTYDIILRLFCDEERLD 418
+ +I+ L+ + R+M + + C+ + +++ ++ ++
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 419 MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
+ +++QMR G P + L+ A HA ++ ++F+ ++
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 155/326 (47%), Gaps = 35/326 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + F+ + + +V + ++ K + +A+ELFD++ R ++ ++T
Sbjct: 61 KIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWT 113
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + + L + +EM E +VV++ +I+ Y ++ + D+A+ + EM E+
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N++ +++++ L R+DEA+ +E+ + ++ A+V + ++D+A
Sbjct: 170 NIVS----WNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEA 221
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
R+ D C N +++ ++ + EA +F+ M E ++++ ++
Sbjct: 222 RRLFD----CMPERNIISWNAMITGYAQNNRIDEADQLFQVMP-----ERDFASWNTMIT 272
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML-DVGIR 468
F ++ ++D+M + ++ + +I+ + + A F +ML D ++
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVIS----WTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 469 PPANLFSTLKQALID-AGM-ETTAIH 492
P + ++ A D AG+ E IH
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIH 354
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 131/289 (45%), Gaps = 34/289 (11%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
+P V L+ LCK + +A++LFD + R D+ ++T ++ G+ + ++ E
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARE 98
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ + +VVT+ +++ Y ++K+ A + EM E+N++ ++T+I+G
Sbjct: 99 LFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYA 151
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
R+D+ALE +++ ++N++V A R+D+A + + M + V
Sbjct: 152 QSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDV----V 203
Query: 367 TYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQ 426
++ ++ L K EA +F M E + +++ ++ + R+D ++
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQV 258
Query: 427 MRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFS 475
M R + +I+ +++ AC F +M P N+ S
Sbjct: 259 MPERDFAS----WNTMITGFIRNREMNKACGLFDRM------PEKNVIS 297
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 151/340 (44%), Gaps = 22/340 (6%)
Query: 60 DKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
+++CKI+ K + ++ L DL +E ++V VL KL AL FF W ++ FK
Sbjct: 219 NRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFK 278
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
H ++++A+ LGK + +++E+++ + +T +KEAVE
Sbjct: 279 HDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVEL 338
Query: 178 FEKMEKYGLKPEVSDF------NKLVDVLCKSKSVEKAQELFDK-----MRHRGLVPDLK 226
FE + + +S+ + L+ + +K ++ +LF + + +VPD+
Sbjct: 339 FE----FAMAGSISNTPTPHCCSLLLKKIVTAKKLD--MDLFTRTLKAYTGNGNVVPDVM 392
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ L+ + NEV + M + P ++ + + K DEA + M
Sbjct: 393 LQHV-LKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFM 451
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK-FKANGFAPETPTYNAVVGAYCWSMR 345
+ ++L+ G K L+EA E ++K G + + +V AYC S +
Sbjct: 452 EASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQ 511
Query: 346 MDDAYRVVDEM-KQCGVGPNSRTYDIILHHLIKARTTQEA 384
D Y++ E+ KQ + P TY I++ +L+ + ++
Sbjct: 512 ARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDG 551
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 174 AVETFEKMEKYGLKPE-------VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
A+E +E + G +P VS FN L+ K L +KM +GL P +
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ +L S+ ++ + M +P V++YG L++A K K YDEA ++ M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ + ++T+ + L ++ + ++ + G P T+NAV+ +
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
AY MK V PN TY++++ L + AY + + +E G + + YD
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNE-GLKLSSKPYDA 638
Query: 407 ILR 409
+++
Sbjct: 639 VVK 641
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 20/264 (7%)
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
RV ++ M P + LI A + + Y Y ++E+ S + + LI
Sbjct: 329 RVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLI 388
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-------------GAYCWSMRMDDA 349
+G K+ ALE YE G P +Y VV G + W +R+
Sbjct: 389 WLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRL--- 445
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+++M+ G+ P R ++ +L KA T A +F+ M G +PTV +Y +L
Sbjct: 446 ---LNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDN-GEKPTVISYGALLS 501
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
+ D VW+ M GI P ++ + + S L K + ++M GI P
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Query: 470 PANLFSTLKQALIDAGMETTAIHF 493
F+ + G+ A +
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEW 585
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 14/283 (4%)
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+L + M G+ P + + L+ +++++ + E+ + ++ E + LI
Sbjct: 332 KLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLM 391
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHI---------FSTLINGLGSDKRLDEALEFYEKF 321
KAKK+ A+ Y ++ ++ P P+ F+ L++ + K
Sbjct: 392 GKAKKWWAALEIYEDLLDEG--PEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKM 449
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTT 381
+ G P+ +NAV+ A + A ++ M G P +Y +L L K +
Sbjct: 450 EDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLY 509
Query: 382 QEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFV 441
EA+ V+ M ++G EP + Y + + +++ ++ + +M ++GI P + F
Sbjct: 510 DEAFRVWNHMI-KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 442 LISALCHANKLDA-ACKYFQQMLDVGIRPPANLFSTLKQALID 483
+IS C N L A ++F +M + P + L +AL +
Sbjct: 569 VISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALAN 610
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 132/329 (40%), Gaps = 41/329 (12%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+ P + +N L+ + + +A+++ M G+VP++ +Y L+ + ++ L+
Sbjct: 183 IGPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS---------PH 296
+ K + FEP+ +TY + Y + + A+ F+ E++EK
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEF 299
Query: 297 IFSTLINGLG-------------SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
F L N +G D L+ + G P + ++ W+
Sbjct: 300 EFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLI----WA 355
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI----KARTTQEAYSVFRRMSSEMGCEP 399
++ Y V E+ + S + +HLI KA+ A ++ + E G EP
Sbjct: 356 CTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDE-GPEP 414
Query: 400 TVSTYDIILRLFCDEERLDMEMAVW-------DQMRARGILPGMHVFFVLISALCHANKL 452
+Y++++ F + +W ++M +G+ P + ++ A A++
Sbjct: 415 NNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASET 474
Query: 453 DAACKYFQQMLDVGIRPPANLFSTLKQAL 481
AA + F+ M+D G +P + L AL
Sbjct: 475 TAAIQIFKAMVDNGEKPTVISYGALLSAL 503
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 107/232 (46%), Gaps = 8/232 (3%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+D+ CK K + A+ +FD+M+ + +V S+T ++ G+ Q ++ +M+
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+PD T G I+A +E F+ + ++ + ++L+ G +D++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+ + + ++ A+V AY R + ++ D+M Q G+ P+ T ++
Sbjct: 427 RLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQM 427
+A ++ F+ M+SE G P++ Y ++ LF RL+ M + M
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 45/323 (13%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA+E F +M+ GLK + F ++ ++ + +++ + + + L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + + L V MK + +VV++ ++ Y + + +EAV + +MQ +
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P + I+ + L+E +F+ K +G N++V Y +DD+ R
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ +EM + + AY+ F R V T ++LF
Sbjct: 428 LFNEMN--------------VRDAVSWTAMVSAYAQFGR---------AVET----IQLF 460
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML-DVGIRPP 470
D+M G+ P +ISA A ++ +YF+ M + GI P
Sbjct: 461 -------------DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 471 ANLFSTLKQALIDAGMETTAIHF 493
+S + +G A+ F
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRF 530
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 128/316 (40%), Gaps = 15/316 (4%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N L+ L +E A +LF RG+ D S+ +++G +Q E REMK
Sbjct: 208 YNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ + D +G ++ A +E + + N ++ S LI+ K L
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A +++ K ++ A+V Y + R ++A ++ +M++ G+ P+ T +
Sbjct: 323 YAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
+ +E S F + G V+ + ++ L+ +D ++++M R
Sbjct: 379 SACANVSSLEEG-SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGM-ETTAI 491
+ + ++SA + + F +M+ G++P + + A AG+ E
Sbjct: 438 VS----WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 492 HFALKIDKLRKTPLVA 507
+F L + P +
Sbjct: 494 YFKLMTSEYGIVPSIG 509
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+++ E F+KM++ GL P ++D LCK V++A +LF MR +G +P++ YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + + + + R+M+ P+ +YG+L+ D+AV F EM E
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
P+ F L++ L K +++A + GFA
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA++ F M G PEV + +V+ CK+ +E A+ +F KM++ G+ P+ SY +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G L C EM P+V T+ L++A C+ K ++A + +K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
+D+ + +MK+ G+ PN+ +L L K QEA +F M + G P V Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDK-GTIPEVVIYTA 171
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ FC +++ ++ +M+ GI P + VL+ L + N LD A + +ML+ G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 467 IRPPANLFSTLKQAL 481
P F L AL
Sbjct: 232 HSPNVPTFVELVDAL 246
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+E+ ++MK P+ V +++ CK EA+ + M++K +P I++ ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGP 363
++++A + K + NG AP +Y +V G Y +M +DDA EM + G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSP 234
Query: 364 NSRTYDIILHHLIKARTTQEAYSVF 388
N T+ ++ L + + ++A S
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAI 259
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+++ E F+KM++ GL P ++D LCK V++A +LF MR +G +P++ YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + + + + R+M+ P+ +YG+L+ D+AV F EM E
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
P+ F L++ L K +++A + GFA
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA++ F M G PEV + +V+ CK+ +E A+ +F KM++ G+ P+ SY +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G L C EM P+V T+ L++A C+ K ++A + +K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
+D+ + +MK+ G+ PN+ +L L K QEA +F M + G P V Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDK-GTIPEVVIYTA 171
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++ FC +++ ++ +M+ GI P + VL+ L + N LD A + +ML+ G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 467 IRPPANLFSTLKQAL 481
P F L AL
Sbjct: 232 HSPNVPTFVELVDAL 246
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+E+ ++MK P+ V +++ CK EA+ + M++K +P I++ ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGP 363
++++A + K + NG AP +Y +V G Y +M +DDA EM + G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSP 234
Query: 364 NSRTYDIILHHLIKARTTQEAYSVF 388
N T+ ++ L + + ++A S
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAI 259
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 151/337 (44%), Gaps = 15/337 (4%)
Query: 60 DKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
D++CKI+ K ++ + DL+VE +LV ++ +L AL FF W ++ FK
Sbjct: 225 DRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFK 284
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
H ++++A+ LGK + N+V +M+ + +T +KEAV+
Sbjct: 285 HDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDL 344
Query: 178 FE---KMEKYGLKPEVSDFNKLVDVLCKSKSVE-----KAQELFDKMRHRGLVPDLKSYT 229
FE P F L+ + +K ++ +A +++ K + LKS
Sbjct: 345 FEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKS-- 402
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + + NE+ +EMK + P ++ ++ + K DEA F M+
Sbjct: 403 -VLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESS 461
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDD 348
++L+ G LDEAL +EK N G + ++ +V AYC ++ D
Sbjct: 462 GNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRD 521
Query: 349 AYRVVD-EMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
AY+++ ++ + + P TY ++ +L+ + ++
Sbjct: 522 AYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDG 558
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 189/487 (38%), Gaps = 76/487 (15%)
Query: 62 ICKILSK-SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS 120
+ I S+ S I L V +S +L +VL KL + +A SFF W ++ + S
Sbjct: 90 VIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELS 149
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQ-----------------------------RK 151
+++++ ++ LG W LV+ MK+ RK
Sbjct: 150 SKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRK 209
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG--LKPEVSDFN-----KLVDVLCKSK 204
L T D V + V E++G ++ V D N LV ++ +
Sbjct: 210 LFTSDC------LDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 205 SVEKAQELF--------DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
VE + L D +H D K+Y + +++ L R + EM+ +
Sbjct: 264 DVEPRKALLFFRWIDESDLFKH-----DEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGY 318
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYH---EMQEKNMMPSPHIFSTLINGLGSDKRLD- 312
E ++ TY + +C+ K EAV + + P+PH F L+ + + K LD
Sbjct: 319 EVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDM 378
Query: 313 ----EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
A++ Y K NG A +V+ + R++ + ++ EMK+ G P+
Sbjct: 379 DLFSRAVKVYTK---NGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQ 435
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMR 428
+I L + EA M S G ++ +CD LD + +++M
Sbjct: 436 SMIASSLSRKGKKDEADEFVDFMESS-GNNLDDKAMASLVEGYCDSGNLDEALVCFEKMV 494
Query: 429 AR-GILPGMHVFFVLISALCHANKLDAACKYFQ-QMLDVGIRPPANLFSTLKQALI---- 482
G+ + F L+ A C+ N++ A K Q+ ++P + + +L L+
Sbjct: 495 GNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKI 554
Query: 483 --DAGME 487
D G E
Sbjct: 555 ARDGGFE 561
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 146/334 (43%), Gaps = 12/334 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+ A F KM+ G N+++ +L K +K ++ + L P+L +Y I
Sbjct: 243 VRTAEAVFNKMKDLGFPLSTFTCNQML-ILYKRVDKKKIADVLLLLEKENLKPNLNTYKI 301
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ ++ + ++ MK E E D+ ++ Y A ++A EM+ ++
Sbjct: 302 LIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGES 361
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD--- 347
+ + H+ L++ G +R DE ++ E P YN V+ A ++D
Sbjct: 362 LEENRHMCKDLLSVYGYLQREDEVRRVWK------ICEENPRYNEVLAAILAFGKIDKVK 415
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
DA V +++ + +S Y ++L + + E + ++M S+ GC T+D +
Sbjct: 416 DAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQM-SDSGCNIGALTWDAV 474
Query: 408 LRLFCDEERLD-MEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
++L+ + ++ E ++ ++++ I P M F L+ + K FQ+M G
Sbjct: 475 IKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAG 534
Query: 467 IRPPANLFSTLKQALIDAGMETTAIHFALKIDKL 500
+ + TL QA ++A + +K D +
Sbjct: 535 YQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNI 568
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 41/319 (12%)
Query: 172 KEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A++ F + K + +P + KL VL K ++A LF+ M GL P + YT
Sbjct: 125 QSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTS 184
Query: 231 LLEGWSQQQNLLRVNEVCREMKC--ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ + + + L + MK +C +PDV T+ +LI+ CK ++D EM
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDC-KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSY 243
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA-PETPTYNAVVGAYCWSMRMD 347
+ S ++T+I+G G +E +G + P+ T N+++G+Y
Sbjct: 244 LGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY------- 296
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDII 407
G G N R + YS F+ M G +P ++T++I+
Sbjct: 297 ------------GNGRN-------------MRKMESWYSRFQLM----GVQPDITTFNIL 327
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
+ F +V D M R + ++I A +++ F++M G+
Sbjct: 328 ILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
Query: 468 RPPANLFSTLKQALIDAGM 486
+P + + +L A AG+
Sbjct: 388 KPNSITYCSLVNAYSKAGL 406
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 162/395 (41%), Gaps = 24/395 (6%)
Query: 87 PELVAEVLNKL--SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P+ V E L++ N AL F+ KQ ++ +++ L + LG +Q L
Sbjct: 108 PKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLF 167
Query: 145 EDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG-LKPEVSDFNKLVDVLCK 202
E M L T D + +A T E M+ KP+V F L+ CK
Sbjct: 168 EVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCK 227
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE-PDVV 261
+ + + +M + G+ +Y +++G+ + + V +M + PDV
Sbjct: 228 LGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVC 287
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD---KRLDEALEFY 318
T +I +Y + + +Y Q + P F+ LI G K++ ++F
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMR---MDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
EK F+ T TYN V+ + + R MDD +R +MK GV PNS TY +++
Sbjct: 348 EK---RFFSLTTVTYNIVIETFGKAGRIEKMDDVFR---KMKYQGVKPNSITYCSLVNAY 401
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVST--YDIILRLFCDEERLDMEMAVWDQMRARGIL 433
KA + SV R++ + + + T ++ I+ + L ++ QM R
Sbjct: 402 SKAGLVVKIDSVLRQI---VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCK 458
Query: 434 PGMHVFFVLISALCHANKLDAACKYFQQML--DVG 466
P F +I DA + +QM+ D+G
Sbjct: 459 PDKITFATMIKTYTAHGIFDAVQELEKQMISSDIG 493
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-----KLLTRDTXXXXXXXXXXXXK 170
G ST +++ +I+ GK F+ + +++ DM + + T ++ K
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ F+ M G++P+++ FN L+ K+ +K + D M R +Y I
Sbjct: 305 MESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNI 361
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++E + + + ++++V R+MK + +P+ +TY L+NAY KA + ++ +
Sbjct: 362 VIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSD 421
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++ F+ +IN G L E Y + + P+ T+ ++ Y D
Sbjct: 422 VVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQ 481
Query: 351 RVVDEMKQCGVGPNSRT 367
+ +M +G T
Sbjct: 482 ELEKQMISSDIGKKRLT 498
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F+ D TY +++ + +A + +H M+EK ++ +++LI+ + S +D A+
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHL 375
+E+ + NG P +Y A + R+++A V EM + V PN TY +++ +L
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Query: 376 IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+ +EA +F +M E+G +P + +I++
Sbjct: 238 VATGKCEEALDIFFKM-QEIGVQPDKAACNILI 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 21/301 (6%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + ++D+ ++ ++ +F M+ +G++ D +YT L+ S ++
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ EM+ EP VV+Y + + +EA Y EM + P+ H ++ L+
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
L + + +EAL+ + K + G P+ N ++ RV+ MK+ GV
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV--- 293
Query: 365 SRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE----------PTVSTYD--------I 406
Y I + L + E+ + R ++S + E PT D +
Sbjct: 294 VLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRV 353
Query: 407 ILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVG 466
I + ++ L + +QMR R I V +I C + + A F L++G
Sbjct: 354 ISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMG 413
Query: 467 I 467
I
Sbjct: 414 I 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEA 384
GF + TY ++ + + R+ Y V MK+ GV ++ TY ++H + + A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 385 YSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLIS 444
++ M GCEPTV +Y +++ + R++ V+ +M + P H + VL+
Sbjct: 177 MRLWEEMRDN-GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 445 ALCHANKLDAACKYFQQMLDVGIRP 469
L K + A F +M ++G++P
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQP 260
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%)
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+G D +YT +L+ + + + + V MK + D VTY LI+ + D
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ + EM++ P+ ++ + L +D R++EA E Y++ + +P TY ++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIK 377
+ + ++A + +M++ GV P+ +I++ +K
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALK 274
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A SFF W Q GF H + ++ L + Q +++ L+ ++ + L T
Sbjct: 394 AWSFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLII 453
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFN------KLVDVLCKSKSVEKAQELFDKM 216
K + A++ F E L +SDFN L+ L K K +A E + M
Sbjct: 454 DLYGISKKPEAAIKVFN--EDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDM 511
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
G+ PD+++++ L+ ++ Q + V + ++ EPD +L+ AYC+ ++
Sbjct: 512 MLTGVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERS 571
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNA 335
A + +M++ N+MP L+ L +++ EA E + + N +
Sbjct: 572 VLAYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEAAAVEESYEEENDNKNSSNVLRL 631
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQC 359
+ + W++ D RV + + C
Sbjct: 632 ALKGHVWTISSTDISRVYNLYRDC 655
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 256 FEPDVV-TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
FE + + + ++ + ++ + + +G + + +N+ S F L+N + D
Sbjct: 103 FETETLHAFATVLAKFQRSSELNSLIGVVNAWKFRNVHFS---FMNLLNLYATAGDFDSV 159
Query: 315 LEFYEKFKANGFAPE--TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
L+ +++++ +G + T +YN V+ Y + +A + D++ G PNSRT+ I++
Sbjct: 160 LKTWDEYRCSGEEKKGCTESYNIVMQVYMTLGKDSEAVQTFDQIINEGGIPNSRTFTIMI 219
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
HL+K A +F + M T+ Y +++ F D +R D + +M++ G
Sbjct: 220 EHLVKLGNLDAAMKIFETLPL-MRITRTLKHYSVLVEAFVDAQRFDEVKTLIAEMKSDGK 278
Query: 433 LPG 435
P
Sbjct: 279 FPS 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 4/207 (1%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G + +++ +L ++ VE +L K+R G+ + ++++ + +
Sbjct: 406 GFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEAA 465
Query: 245 NEVCREMKCECFEPD----VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+V E + C ++ Y L+ K K+ EA+ +M + P FS
Sbjct: 466 IKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMMLTGVSPDIQTFSG 525
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L+ + + + G P+ +V AYC R AYRV +MK
Sbjct: 526 LMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERSVLAYRVFQDMKDSN 585
Query: 361 VGPNSRTYDIILHHLIKARTTQEAYSV 387
+ P+ T ++++ L + +EA +V
Sbjct: 586 LMPDRETKELLVKSLWREEKRKEAAAV 612
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 136/328 (41%), Gaps = 10/328 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSD--FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
VKE +ME++G V++ F L+ KA LFD MR +GLVP Y
Sbjct: 163 VKEVELLLMEMERHG-DTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCY 221
Query: 229 TILLEGWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
IL++ + +C E + E ++ + G +I C +K EA +
Sbjct: 222 QILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARK 281
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+ + + I+S + G + ++ L F + K + P+ N ++ + C
Sbjct: 282 LVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK---YEPDVFVGNRILHSLCRRFG 338
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYD 405
+ AY ++E++ G + T+ I++ + A + S+ G +P V +Y+
Sbjct: 339 SERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSK-GYKPDVYSYN 397
Query: 406 IILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDV 465
IL + + D+M+ G++ + F ++++ C A + + A + +M
Sbjct: 398 AILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGY 457
Query: 466 GIRPPANLFSTLKQALIDAGMETTAIHF 493
G+ + + L +A G + A+
Sbjct: 458 GLIEASKVEDPLSEAFSLVGFDPLAVRL 485
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 127/324 (39%), Gaps = 47/324 (14%)
Query: 186 LKPEVSDFNKLVDVL----CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
L +S +NK+ +V+ CK + K +E+ M + ++ +KSY
Sbjct: 830 LSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSY------------- 876
Query: 242 LRVNEVCREMKCECFEPD--------------------VVTYGILINAYCKAKKYDEAVG 281
E R+M C EP V+ Y +LI +AK + E
Sbjct: 877 ---REYVRKM---CLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNK 930
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
EMQ + ++P F+ L++G S +L + + G P + AV + C
Sbjct: 931 VLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLC 990
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDI-ILHHLIKARTTQEAYSVFRRMSSEMGCEPT 400
+ + A + M+ G S I+ LI +A R++ P
Sbjct: 991 DNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN 1050
Query: 401 VSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQ 460
YD I++ D LD+ + + + M +PG + +I+ L N+LD A +
Sbjct: 1051 ---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 461 QMLDVGIRPPANLFSTLKQALIDA 484
+M+++G+ P + +S L +A
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEA 1131
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 15/214 (7%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+KP + LC + V+KA +L+ M +G +L S + + + L+
Sbjct: 974 GMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGW--NLGSSVVQTK---IVETLISK 1028
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKK-------YDEAVGFYHEMQEKNMMPSPHI 297
E+ K E F V G++ Y K D AV + M + +P
Sbjct: 1029 GEI---PKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSS 1085
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ ++INGL +LD+A++F+ + G +P T++ +V +C + ++ ++ R++ M
Sbjct: 1086 YDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMV 1145
Query: 358 QCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
G P+ + ++ + T +A + M
Sbjct: 1146 GLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMM 1179
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 112/272 (41%), Gaps = 2/272 (0%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN-EVCRE 250
+FN L+ + ++ A L D+M G +S+ +L+ + LRV+ + +
Sbjct: 530 EFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEK 589
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
++ D T L+ YCK + +H+M + + +++LI +
Sbjct: 590 WPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKET 649
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
L++ L + + + + P+ + +++ ++ + + S I
Sbjct: 650 LNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRI 709
Query: 371 ILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRAR 430
+ L + A+SV +R+ E GC Y+ +++ C E++ A+ D+M +
Sbjct: 710 FVEKLTVLGFSCIAHSVVKRLEGE-GCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDK 768
Query: 431 GILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+P + +LI LC ANK A +Q+
Sbjct: 769 KHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI 800
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 17/312 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++K A + FE+ K + +N L++ C++K + A LF M R + S++
Sbjct: 176 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWS 231
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ L R ++ M E +VV++ LIN + + Y+ A+ Y EM EK
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + + +++ L + + NG + A+V Y +D A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
V M + ++ ++ +A FR+M G +P + +L
Sbjct: 348 ATVFSNMNHKDI----LSWTAMIQGWAVHGRFHQAIQCFRQMMYS-GEKPDEVVFLAVLT 402
Query: 410 LFCDEERLDMEMAVWDQMRAR-GILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
+ +D+ + +D MR I P + + +++ L A KL+ A + + M I
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM---PIN 459
Query: 469 PPANLFSTLKQA 480
P ++ L +A
Sbjct: 460 PDLTTWAALYRA 471
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 97/254 (38%), Gaps = 33/254 (12%)
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKN-------------------------MMPS 294
++ + +LIN YC+AK A + M E+N +MP
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 295 PHIFS--TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++ S TLING + A+ Y + G P T AV+ A S + R+
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
+ G+ + ++ K A +VF M+ + + ++ +++ +
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK-----DILSWTAMIQGWA 370
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM-LDVGIRPPA 471
R + + QM G P VF +++A +++++D +F M LD I P
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
Query: 472 NLFSTLKQALIDAG 485
+ + L AG
Sbjct: 431 KHYVLVVDLLGRAG 444
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+ F++M + + +N ++ ++ + A ELF +M+ G + + + T +
Sbjct: 211 EDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 232 LEGWSQQQNLLRVNEVCREMKCEC--FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L + L + E+ + ++ D++ L++ YCK ++A+ +++M+E+
Sbjct: 267 LRACTG----LALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+++ +ST+I+GL + EAL+ +E+ K++G P T V+ A + ++D
Sbjct: 323 DVIT----WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 350 YRVVDEMKQC-GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+ MK+ G+ P Y ++ L KA +A ++ +EM CEP T+ +L
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV----KLLNEMECEPDAVTWRTLL 434
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISAL-CHANKLDAACKYFQQMLDVGI 467
C +R +M +A + + + P + L+S + ++ K D+ + +M D GI
Sbjct: 435 GA-CRVQR-NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 468 R 468
+
Sbjct: 493 K 493
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 140/347 (40%), Gaps = 85/347 (24%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ----QQN 240
G +P + N L+++ K + A +LFD+M R ++ S+T ++ +S+ Q+
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKA 146
Query: 241 L------LRVN------------EVC------REMKC----ECFEPDVVTYGILINAYCK 272
L LR N C R + C E E DV LI+ + K
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
+ ++A+ + EM + + +++++I G + R D ALE +++ K GF E T
Sbjct: 207 LGEPEDALSVFDEMVTGDAI----VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 333 Y---------------------------------NAVVGAYCWSMRMDDAYRVVDEMKQC 359
NA+V YC ++DA RV ++MK+
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 360 GVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
V T+ ++ L + +QEA +F RM S G +P T I+ LF +
Sbjct: 323 DV----ITWSTMISGLAQNGYSQEALKLFERMKSS-GTKPNYIT--IVGVLFACSHAGLL 375
Query: 420 EMAVWDQMRAR----GILPGMHVFFVLISALCHANKLDAACKYFQQM 462
E W R+ GI P + +I L A KLD A K +M
Sbjct: 376 EDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 122/318 (38%), Gaps = 55/318 (17%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
LC + + +A + D ++ GL D +Y+ L++ + + N +CR + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ +LIN Y K ++A + +M ++N++ ++T+I+ K +ALE
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVIS----WTTMISAYSKCKIHQKALELLV 151
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLI--- 376
+ P TY++V+ + M D M CG+ D+ + +
Sbjct: 152 LMLRDNVRPNVYTYSSVLRS---CNGMSDV-----RMLHCGIIKEGLESDVFVRSALIDV 203
Query: 377 --KARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
K ++A SVF M + ++ I+ F R D+ + ++ +M+ G +
Sbjct: 204 FAKLGEPEDALSVFDEMVT-----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 435 --------------------GM--HVFFV-----------LISALCHANKLDAACKYFQQ 461
GM HV V L+ C L+ A + F Q
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 462 MLDVGIRPPANLFSTLKQ 479
M + + + + S L Q
Sbjct: 319 MKERDVITWSTMISGLAQ 336
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 16/341 (4%)
Query: 181 MEKYG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+EK+ L+P+V +N +++ + K E A + +++ RG P +Y +++E
Sbjct: 582 LEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLAC 641
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ V+E R+M+ P+ + Y +L+N K K DEAV +M+ + ++ S ++
Sbjct: 642 EKYNLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALY 700
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
L L S R +E L +K P TY ++ A S + +A + D+MK+
Sbjct: 701 YDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK 760
Query: 359 CGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSS-----------EMGCEPTVSTYDII 407
PN T +I+L ++ +EA +F++MS E P T++ +
Sbjct: 761 V-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTM 819
Query: 408 LRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
L ++E+ D + +M G ++ A K + ++ M
Sbjct: 820 LDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNR 879
Query: 468 RPPANLFSTLKQALIDAGMETTAIHFALKID-KLRKTPLVA 507
PP+ L ++ G +AI ++ K+ +T L A
Sbjct: 880 IPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRA 920
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 34/269 (12%)
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNMMP 293
W Q+Q+ + N++ + Y +N K+++ EA+ +H M + + P
Sbjct: 494 WLQRQDRYKSNKI------------RIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYP 541
Query: 294 SPHIFSTLINGLGSDKRLDEALEFY----------EKFKANGFA-------PETPTYNAV 336
+ ++ LG + E FY +KFK P+ YNAV
Sbjct: 542 DMVAYRSIAVTLGQAGHIKEL--FYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAV 599
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMG 396
+ A + + A+ V+ ++KQ G P+ TY +I+ ++ + FR+M +
Sbjct: 600 LNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM--QKS 657
Query: 397 CEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAAC 456
P Y +++ E + D + + M +RGI+ +++ L LC A + +
Sbjct: 658 SIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGL 717
Query: 457 KYFQQMLDVGIRPPANLFSTLKQALIDAG 485
+++ V +P ++ L QA +D+G
Sbjct: 718 NMLKKICRVANKPLVVTYTGLIQACVDSG 746
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 146/364 (40%), Gaps = 47/364 (12%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+P V N ++ + ++K ++ LF + +VP++ SY ++ + N+
Sbjct: 177 RPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEAL 236
Query: 246 EVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
EV R + F P VTY L +A + +A EM K +++ LI G
Sbjct: 237 EVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRG 296
Query: 305 LGSDKRLDEALEFYEKFKA-----NGFAPET----------------------------- 330
D+A+EF+++ K+ +G T
Sbjct: 297 YLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMH 356
Query: 331 -PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP-----NSRTYDIILHHLIKARTTQEA 384
PT N ++ + + D+A+ + +EM P NS T I+++ K EA
Sbjct: 357 PPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEA 416
Query: 385 YSVFRRMSSEMGCEPTVSTY----DIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFF 440
+ F+++ S++ +P V Y +I+ R FC++ L + + +R +
Sbjct: 417 INTFKKVGSKVTSKPFVMDYLGYCNIVTR-FCEQGMLTEAERFFAEGVSRSLPADAPSHR 475
Query: 441 VLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFALKIDKL 500
+I A A ++D A K +M+DV +R A+ + + LI G T + K+ +
Sbjct: 476 AMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGER 535
Query: 501 RKTP 504
P
Sbjct: 536 EPKP 539
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 49/296 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A +M G + + +N L+ +KA E FD+++ + V D
Sbjct: 267 RIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNA 326
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+E W ++ N E R + + F T +L+ + K K DEA ++EM +
Sbjct: 327 TFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD- 385
Query: 290 NMMPSPHI--------------------FSTLING---LGS------------------- 307
N P P+I FS IN +GS
Sbjct: 386 NHAP-PNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVT 444
Query: 308 ----DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
L EA F+ + + + P++ A++ AY + R+DDA +++D M +
Sbjct: 445 RFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRV 504
Query: 364 NSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
+ + LIK E+ V +M E +P S YD+++R CD + LD
Sbjct: 505 VADFGARVFGELIKNGKLTESAEVLTKM-GEREPKPDPSIYDVVVRGLCDGDALDQ 559
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+EK G + N ++D+ K +SVE A+++FD++ R + +++ G+ + N
Sbjct: 127 VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR----KGSDWNVMISGYWKWGN 182
Query: 241 LLRVNEVCREMKCECF----EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+E C+ F E DVV++ ++I + K K + A ++ M EK+++
Sbjct: 183 --------KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVS--- 231
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA-----YR 351
++ +++G + ++AL + G P T+ V+ A C S R D + +
Sbjct: 232 -WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA-C-SFRADPSLTRSLVK 288
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
++DE + V N +L K R Q A RR+ +E+G + + T++ ++ +
Sbjct: 289 LIDEKR---VRLNCFVKTALLDMHAKCRDIQSA----RRIFNELGTQRNLVTWNAMISGY 341
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP 470
+ ++D M R ++ + LI+ H + A ++F+ M+D G P
Sbjct: 342 TRIGDMSSARQLFDTMPKRNVVS----WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 133/294 (45%), Gaps = 23/294 (7%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A++ FEKM + + +N ++ L K+ + A+ LFD+M R DL S+
Sbjct: 170 VRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNT 221
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+L+G+++ + + + E+ +M E + V++ ++ Y KA + A + +M
Sbjct: 222 MLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMP--- 274
Query: 291 MMPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+P+ ++ ++ +I G L EA ++ A+G + +++ A S +
Sbjct: 275 -LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL 333
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
R+ +K+ +G N+ + +L K ++A+ VF + + + +++ +L
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK-----DLVSWNTML 388
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ ++ +MR GI P F ++ + HA +D YF M
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
N L+D+ K +++KA ++F+ + + DL S+ +L G + E+ M+
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTLINGLGSDKRL 311
E PD VT+ ++ + A DE + +++ M++ +++P + L++ LG RL
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ---CGVGPNSRTY 368
EA++ + P + A++GA +D A V+D + + C G S
Sbjct: 469 KEAIKVVQTMP---MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS--- 522
Query: 369 DIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
+L ++ A E + R MG E
Sbjct: 523 --LLSNIYAAAEDWEGVADIRSKMKSMGVE 550
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 119/309 (38%), Gaps = 42/309 (13%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E V +++ +SD++KL+ + K +E + + KM G+ PD+ + T
Sbjct: 369 KVAEGV-----LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTAT 423
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ +S+ N R E +K PD Y +I Y A K EMQ K
Sbjct: 424 ALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAK 483
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ S ++ L+ + + ANG A
Sbjct: 484 ELKASEEVYMALLRA------------YAQMGDANGAAG--------------------- 510
Query: 350 YRVVDEMKQCGVGPNS-RTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIIL 408
+ M+ GP S Y + + KA +A S F M ++G +P ++
Sbjct: 511 --ISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEM-RKLGHKPDDKCIANLV 567
Query: 409 RLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIR 468
R + E LD + + Q+ GI G+ + VL+ + + ++ A + ++ +G
Sbjct: 568 RAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEA 627
Query: 469 PPANLFSTL 477
PP L +L
Sbjct: 628 PPFELQVSL 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 94/250 (37%)
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
F + Y LI+ + K ++ +M + + P + L++ + A
Sbjct: 379 SFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERA 438
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHH 374
E +E K+ G P+ Y A++ Y + + R++ EM+ + + Y +L
Sbjct: 439 TEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRA 498
Query: 375 LIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILP 434
+ A + M + Y + + + ++D + +D+MR G P
Sbjct: 499 YAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKP 558
Query: 435 GMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHFA 494
L+ A N LD A + Q+ GI ++ L + + G+ A
Sbjct: 559 DDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
Query: 495 LKIDKLRKTP 504
+KI +L + P
Sbjct: 619 VKISQLGEAP 628
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 11/288 (3%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXXXXXXXX 166
H +K F+ T ALI+ K R +K + + ++K R L++ ++
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
+ AVE FEK++ GLKP+ + +N L+ + V +A + F++M +VP LK
Sbjct: 313 QH---ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
T LL S L E+ + E D+ LI+ Y K A +
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA--YCWSM 344
+ K P ++ +I+G G + A+E +E + P T+ AV+ A +C ++
Sbjct: 430 EPKP--KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNV 487
Query: 345 -RMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRM 391
+ +R++ E + G P++ ++ L ++ +EA V +M
Sbjct: 488 EKGSQIFRLMQE--EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA+ F++M ++ VS +N ++ ++ E A++LFD+M R DL S+
Sbjct: 79 RCNEALRVFKRMPRW---SSVS-YNGMISGYLRNGEFELARKLFDEMPER----DLVSWN 130
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++++G+ + +NL + E+ M E DV ++ +++ Y + D+A + M EK
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 290 NMMPSPHIFST---------------------------LINGLGSDKRLDEALEFYEKFK 322
N + + S L+ G K++ EA +F++
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQ 382
+ ++N ++ Y S ++D+A ++ DE V T+ ++ I+ R +
Sbjct: 247 VR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVE 298
Query: 383 EAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVL 442
EA +F +M E +++ +L + ER++M ++D M R + + +
Sbjct: 299 EARELFDKMP-----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STWNTM 349
Query: 443 ISALCHANKLDAACKYFQQM 462
I+ K+ A F +M
Sbjct: 350 ITGYAQCGKISEAKNLFDKM 369
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 139/318 (43%), Gaps = 22/318 (6%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + F++ +V + +V +++ VE+A+ELFDKM R V S+
Sbjct: 265 KIDEARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV----SWN 316
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L G+ Q + + E+ M C +V T+ +I Y + K EA + +M ++
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +I G EAL + + + G ++++ + + ++
Sbjct: 373 D----PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ + + G + +L K + +EA +F+ M+ + + +++ ++
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-----DIVSWNTMIA 483
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML-DVGIR 468
+ ++ + ++ M+ G+ P ++SA H +D +YF M D G+
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 469 PPANLFSTLKQALIDAGM 486
P + ++ + L AG+
Sbjct: 544 PNSQHYACMVDLLGRAGL 561
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 50/336 (14%)
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN----LLRVNEVCR 249
N L+++ K S+E+A+++F+KM R D ++T L+ G+SQ LL N++ R
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 250 -------------------EMKCEC------------FEPDVVTYGILINAYCKAKKYDE 278
E + C F+ +V L++ Y + D+
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A + ++ +N + ++ LI G ++ALE ++ +GF P +Y ++ G
Sbjct: 215 AQLVFDALESRNDVS----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCE 398
A + ++ V M + G + + +L K+ + +A +F R++
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR---- 326
Query: 399 PTVSTYDIILRLFCDEERLDMEMAVW-DQMRARGILPGMHVFFVLISALCHANKLDAACK 457
V +++ +L + + E W ++MR GI P F +++A H+ LD
Sbjct: 327 -DVVSWNSLLTAYA-QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 458 YFQQMLDVGIRPPANLFSTLKQALIDAGMETTAIHF 493
Y++ M GI P A + T+ L AG A+ F
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++A+E F+ M + G +P + L + +E+ + + M G +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+ +++ ++ ++ + + DVV++ L+ AY + EAV ++ EM+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLA----KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F +++ LDE +YE K +G PE Y VV + ++ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 351 RVVDEM 356
R ++EM
Sbjct: 419 RFIEEM 424
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEAV FE+M + G++P F ++ S +++ ++ M+ G+VP+ Y +
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY---HEMQE 288
++ + +L R EM EP + L+NA C+ K E +G Y H +
Sbjct: 405 VDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNA-CRMHKNTE-LGAYAAEHVFEL 459
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
P PH+ L N S R ++A +K K +G E
Sbjct: 460 DPDDPGPHVI--LYNIYASGGRWNDAARVRKKMKESGVKKE 498
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 43/263 (16%)
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTLINGLGSDKRLDEAL 315
EPDV+ + +++A+ K Y+EA+G ++ M K ++P F T++ G+ +RL +
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 316 EFYEKFKANGFAPETPTYNAVVGAY--CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILH 373
E + K NG ++++ Y C S+R +A +V + M + NS ++ +L
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVR--EARQVFNGMSK----KNSVSWSALLG 339
Query: 374 HLIKARTTQEAYSVFR-----------------------RMSSEM-------GCEPTVST 403
+ ++A +FR R+ E+ GC V
Sbjct: 340 GYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
++ L+ +D V+ +M R ++ + ++SAL + + A +F M+
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMI----TWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 464 DVGIRPPANLFSTLKQALIDAGM 486
GI+P F + A GM
Sbjct: 456 KKGIKPDYISFIAILTACGHTGM 478
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 19/316 (6%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTIL 231
+A F++M + P+V + ++ K+ E+A LF M R +GLVPD ++ +
Sbjct: 216 DARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + L + E+ ++ +VV L++ Y K EA ++ M +KN
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ +S L+ G + ++A+E + + + A G ++R+
Sbjct: 332 VS----WSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLA--AVRLGK--E 383
Query: 352 VVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLF 411
+ + + G N ++ K+ A V+ +MS + T++ +L
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-----NMITWNAMLSAL 438
Query: 412 CDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML-DVGIRPP 470
R + ++ ++ M +GI P F +++A H +D YF M GI+P
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPG 498
Query: 471 ANLFSTLKQALIDAGM 486
+S + L AG+
Sbjct: 499 TEHYSCMIDLLGRAGL 514
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 148/384 (38%), Gaps = 82/384 (21%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KE + + K G ++ L+ + ++ +E A ++FDK HR D+ SYT L
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTAL 206
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G++ + + ++ E+ + DVV++ +I+ Y + Y EA+ + +M + N+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 292 MPSPHIFSTLI---------------------NGLGSDKRLDEAL-EFYEKF----KANG 325
P T++ +G GS+ ++ AL + Y K A G
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 326 FAPETP-----TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL-------- 372
P ++N ++G Y +A + EM + G PN T IL
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 373 -------HHLIKAR----------------------TTQEAYSVFRRMSSEMGCEPTVST 403
H I R + A+ VF + ++S+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-----LHKSLSS 437
Query: 404 YDIILRLFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQML 463
++ ++ F R D ++ +MR GI P F L+SA H+ LD F+ M
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 464 -DVGIRPPANLFSTLKQALIDAGM 486
D + P + + L +G+
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGL 521
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 141/324 (43%), Gaps = 24/324 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F+++ + P+ +N ++ ++ + EKAQ FD+M + D S+
Sbjct: 108 RMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWN 159
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G++++ + E RE+ E + V++ +I+ Y + ++A F+ +
Sbjct: 160 TMITGYARRGEM----EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ ++ +I G K+++ A ++ N T+NA++ Y + R +D
Sbjct: 216 GVVA----WTAMITGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDG 268
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
++ M + G+ PNS L + Q + + +S C V+ ++
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLIS 327
Query: 410 LFCDEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRP 469
++C L +++ M+ + ++ + +IS D A F++M+D IRP
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRP 383
Query: 470 PANLFSTLKQALIDAGMETTAIHF 493
F + A AG+ + +
Sbjct: 384 DWITFVAVLLACNHAGLVNIGMAY 407
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 138/313 (44%), Gaps = 22/313 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A E F M + K EVS +N ++ + +EKA F RG+V ++T
Sbjct: 170 EMEKARELFYSMME---KNEVS-WNAMISGYIECGDLEKASHFFKVAPVRGVV----AWT 221
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + + + + ++M ++VT+ +I+ Y + + ++ + + M E+
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ S+ + G L + ++ + + +++ YC + DA
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 350 YRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILR 409
+++ + MK+ V ++ ++ + +A +FR M P T+ +L
Sbjct: 339 WKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDN-KIRPDWITFVAVL- 392
Query: 410 LFCDEERL-DMEMAVWDQM-RARGILPGMHVFFVLISALCHANKLDAACKYFQQMLDVGI 467
L C+ L ++ MA ++ M R + P + ++ L A KL+ A K + M
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---PF 449
Query: 468 RPPANLFSTLKQA 480
RP A +F TL A
Sbjct: 450 RPHAAVFGTLLGA 462
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
+S ++AL+ + + +V W +V +MK+RK L K+A+
Sbjct: 51 YSVRLYNALVS---RYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGI 107
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSK---------SVEKAQELFDKMRHRGLVPDLKSY 228
E++ + GL +V +N ++D K S E EL K++ +G+ P +
Sbjct: 108 VEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLF 167
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L ++QQ + +V + M+ E EP+++ +LINA+ A K+ EA+ YH ++E
Sbjct: 168 CTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKE 227
Query: 289 KNMM-PSPHIFSTLINGLGSDKRLD 312
+ P +STL+ K+ +
Sbjct: 228 TVWIHPDVVTYSTLMKAFTRAKKYE 252
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD--LKSYTILLEGWSQQQNLL 242
G +P+ + ++ L + +A LF ++ + ++ Y L+ + +++
Sbjct: 11 GSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSW 70
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
RV EMK F + YG +I Y + +A+G E++E + I++++I
Sbjct: 71 RV---VNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVI 127
Query: 303 NGLGSDKRLDEALEF--YE-------KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ G LDE L+F +E K K+ G AP + + AY +V+
Sbjct: 128 DTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVL 187
Query: 354 DEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCD 413
M+ G+ PN +++++ A EA S++ + + P V TY +++ F
Sbjct: 188 KMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTR 247
Query: 414 EERLDM 419
++ +M
Sbjct: 248 AKKYEM 253
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 14/288 (4%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E +E +++ GL+ + N L+D+ K + +A+ +FD + R +V S+T ++ G+
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGY 333
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ L +V R++ + E DVV + +I +AK+ +A+ + EMQ N P
Sbjct: 334 ARCGLL----DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDE 389
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++ LD + + + + ++V Y + +A V
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 356 MKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEE 415
++ NS TY I+ L A S F M + G P T+ +L C
Sbjct: 450 IQT----RNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAPDEITFIGLLSACCHGG 504
Query: 416 RLDMEMAVWDQMRAR-GILPGMHVFFVLISALCHANKLDAACKYFQQM 462
+ + QM++R + P + + +++ L A L+ A + + M
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 107/289 (37%), Gaps = 57/289 (19%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+V++ LIN Y K + ++A+ Y M+ + + P L++ L+ EFY
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ---------------CGVGP 363
E K NG P NA++ + + +A R+ D +++ CG+
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 364 NSRTY-------DIILHHL-----IKARTTQEAYSVFRRMS------------------S 393
SR D++L + ++A+ Q+A ++F+ M S
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 394 EMGC-------EPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGILPGMH-----VFFV 441
++G + Y + L + +DM + A + G+ +
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 442 LISALCHANKLDAACKYFQQMLDVGIRPPANLFSTLKQALIDAGMETTA 490
+I L A YF +M+D GI P F L A GM T
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 210 QELFDKMRHRGLVPD-LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
QE+F KMR G + +K + L + + L E+ ++K + PDVV + ++
Sbjct: 185 QEIFHKMRTEGFTNEAVKMFDALSKDGRTHEAL----ELFSQIKDKNRMPDVVAHTAIVE 240
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD-KRLDEALEFYEKFKANGFA 327
AY A + E + + M + P+ + +S LI GL +D K +A ++ + NG +
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS 300
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
P TY AV A+ + + A ++ EMK G P+ +
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEK 339
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F KM G E K+ D L K +A ELF +++ + +PD+ ++T ++E +
Sbjct: 186 EIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY-CKAKKYDEAVGFYHEMQEKNMMPS 294
+ +V M P+ TY +LI K + +A + EM M P+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
++ + + + + A E ++ K GF P+
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+ + L D R EALE + + K P+ + A+V AY + + + +V M G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 361 VGPNSRTYDIILHHL-IKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDM 419
V PN+ TY +++ L +T ++A M G P +TY + F E + +
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN-GMSPNAATYTAVFEAFVREGKEES 321
Query: 420 EMAVWDQMRARGILP 434
+ +M+ +G +P
Sbjct: 322 ARELLQEMKGKGFVP 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+ E+ +M+ E F + V + +A K + EA+ + ++++KN MP + ++
Sbjct: 184 LQEIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVG 362
+ + E L+ + + A+G +P TY+ ++ G DA + + EM G+
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS 300
Query: 363 PNSRTYDIILHHLIKARTTQEAYSVFRRM 391
PN+ TY + ++ + A + + M
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEM 329
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 31/298 (10%)
Query: 176 ETFEKMEKYGLKPE--VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
E E + L PE + +N LVD L KS + A++LFD+M R D+ SYT +++
Sbjct: 191 ELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMID 246
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+++ +++ ++ E + DV + LI Y + + +EA + EM KN+ P
Sbjct: 247 GYAKGGDMVSARDLFEEAR----GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 294 SPHIFSTLINGLGSDK--RLDEALEFY-----EKFKANGFAPETPTYNAVVGAYCWSMRM 346
I L++ L E ++ Y KF ++ P NA G M
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCG------HM 356
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDI 406
D A ++ +EM Q + +Y ++ + EA +F +M E G P + +
Sbjct: 357 DRAAKLFEEMPQ----RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE-GIVPDEVAFTV 411
Query: 407 ILRLFCDEERLDME-MAVWDQMRAR-GILPGMHVFFVLISALCHANKLDAACKYFQQM 462
IL++ C + RL E + ++ MR + IL + +++ L KL A + + M
Sbjct: 412 ILKV-CGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 92 SKFQETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 150
Query: 132 GKIRQFKVIW--NLVEDM-KQRKLLTRDTXXXXXXXXXXXXK----------VKEAVET- 177
G + K+I N+ M R L R T E V +
Sbjct: 151 GAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 210
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +M G++P+V N LV K +++ +EL +M+ +G VP+ KSY L+ ++
Sbjct: 211 FRQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFAL 265
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + EM D ++Y L++ C+ KYDEA ++EK ++
Sbjct: 266 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 320
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 117 SKFQETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 175
Query: 132 GKIRQFKVIW--NLVEDM-KQRKLLTRDTXXXXXXXXXXXXK----------VKEAVET- 177
G + K+I N+ M R L R T E V +
Sbjct: 176 GAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 235
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +M G++P+V N LV K +++ +EL +M+ +G VP+ KSY L+ ++
Sbjct: 236 FRQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFAL 290
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + EM D ++Y L++ C+ KYDEA ++EK ++
Sbjct: 291 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 345
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 137/333 (41%), Gaps = 19/333 (5%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A FE M + P++ FN + + + + LF ++ G++PD ++ LL+
Sbjct: 82 ARHLFEAMSE----PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 234 GWSQQQNLLRVNEV-CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + L ++ C MK + +V LIN Y + + D A + + E
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVE---- 192
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ +I G R +EAL + + + P T +V+ + +D +
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 353 VDEMKQCGVGPNSRTYDIILHHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFC 412
K+ + ++ K + +A S+F +M + + ++ +
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-----DTQAWSAMIVAYA 307
Query: 413 DEERLDMEMAVWDQMRARGILPGMHVFFVLISALCHANKLDAACKYFQQMLD-VGIRPPA 471
+ + + M ++++MR+ + P F L++A H +++ KYF QM+ GI P
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 472 NLFSTLKQALIDAGMETTAIHFALKIDKLRKTP 504
+ ++ L AG A F IDKL +P
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEF---IDKLPISP 397
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+V+E + F +M K+G+ P + + +VD+L ++ ++E A E DK+ + P +
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL---PISPTPMLW 402
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVV---TYGILINAYCKAKKYDEAVGFYHE 285
ILL S NL +V + FE D Y IL N Y + KK++
Sbjct: 403 RILLAACSSHNNLDLAEKVSERI----FELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 286 MQEKNMMPSPHIFSTLINGL-----------GSDKRLDEAL-EFYEKFKANGFAPET 330
M+++ + P S +N + + +L AL E ++ K +G+ P+T
Sbjct: 459 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDT 515
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+V++ L++ Y + EA + EM+EKN++ + +I+GL + +E L+ +
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS----WMIMISGLAENGFGEEGLKLF 405
Query: 319 EKFKANGFAPETPTYN------AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
K GF P ++ AV+GAYC + + ++ + G + + ++
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYC------NGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 373 HHLIKARTTQEAYSVFRRMSSEMGCEPTVSTYDIILRLFCDEERLDMEMAVWDQMRARGI 432
K +EA VFR M C +VS ++ ++ + V+++M +GI
Sbjct: 460 TMYAKCGVVEEARQVFRTMP----CLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 433 LPGMHVFFVLISALCHANKLDAACKYFQQMLDVGIRPP-ANLFSTLKQALIDAG 485
P +++A HA +D KYF M V PP A+ ++ L L +G
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
+G +P N+L+DV CKS + A++LFD++ PD + T ++ G+ ++
Sbjct: 43 FGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKIARTTMVSGYCASGDITL 98
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
V K D V Y +I + A+ + +M+ + P F++++
Sbjct: 99 ARGVFE--KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 304 GL---GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--CWS--MRMDDAYRVVDEM 356
GL D++ + ++F+ +G T NA+V Y C S + A +V DE+
Sbjct: 157 GLALVADDEK--QCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214