Miyakogusa Predicted Gene

Lj0g3v0279519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0279519.1 Non Chatacterized Hit- tr|I1KYP5|I1KYP5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,40.88,5e-19,no
description,DNA-binding pseudobarrel domain; B3,B3 DNA binding domain;
B3 DNA binding domain,B3 D,CUFF.18596.1
         (241 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18990.1 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional...    73   1e-13
AT3G18960.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    68   7e-12
AT1G49475.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    65   4e-11
AT4G01580.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    65   4e-11
AT4G33280.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    49   3e-06

>AT3G18990.1 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional
           factor family protein | chr3:6549077-6551568 REVERSE
           LENGTH=341
          Length = 341

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%)

Query: 45  FFRIITLPCLEAGELILPNGFMKKYSGGMSNPVFLKAPDNISWEVHWSKHDSYFWFQKGW 104
           F ++I    ++   L +P+ F+ K+   +S  V L  PD   W V   K D+  WFQ GW
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65

Query: 105 KEFVKYYSLDHEHLVLFEFKDASHFRVHIFDKSTLEIEYPSNENQGEEHN 154
           +EFV  YS+   +L++F ++  S F V+IF+ S  EI Y S       HN
Sbjct: 66  QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHN 115


>AT3G18960.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:6542618-6543568 FORWARD LENGTH=209
          Length = 209

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 35  NKQIPNS-ATRFFRIITLPCLEAGELILPNGFMKKYSGGMSNPVFLKAPDNISWEVHWSK 93
           ++Q P S   +FF+++    ++   + +P  F+K     +S  V L+ P      +   +
Sbjct: 19  SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78

Query: 94  HDSYFWFQKGWKEFVKYYSLDHEHLVLFEFKDASHFRVHIFDKSTLEIEYP 144
                WF +GW EF + +S++  H +LFE+K+ S FRV IF+ S  E +YP
Sbjct: 79  IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129


>AT1G49475.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr1:18312983-18313748 FORWARD LENGTH=190
          Length = 190

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 41  SATRFFRIITLPCLEAGELILPNGFMKKYSGGMSNPVFLKAPDNISWEVHWSKHDSYFWF 100
           +  +F +II L  +    + +P  F++ +   +++ V L+ P      +   +     WF
Sbjct: 30  TVKKFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWF 88

Query: 101 QKGWKEFVKYYSLDHEHLVLFEFKDASHFRVHIFDKSTLEIEYP---SNENQGEEHNPDQ 157
           +KGW EF + +SL   H + F ++  S FRV IFD S  EIEYP   +++N+ E  + D+
Sbjct: 89  EKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDE 148

Query: 158 IG 159
            G
Sbjct: 149 QG 150


>AT4G01580.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr4:685791-686668 FORWARD LENGTH=190
          Length = 190

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)

Query: 35  NKQIPNS-ATRFFRIITLPCLEAGELILPNGFMKKYSGGMSNPVFLKAPDNISWEVHWSK 93
           ++Q P S   +FF+++    ++   + +P  F+K     +S  V L  P      +   +
Sbjct: 19  SQQDPESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKR 78

Query: 94  HDSYFWFQKGWKEFVKYYSLDHEHLVLFEFKDASHFRVHIFDKSTLEIEYP 144
                WF +GW EF + +S++  H +LFE+K  S FRV IF+ S  E  YP
Sbjct: 79  IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129


>AT4G33280.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr4:16047357-16049310 REVERSE LENGTH=337
          Length = 337

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 59  LILPNGFMKKYSGGMSNPVFLKAPDNISWEVHWSKHDS-YFWFQKGWKEFVKYYSLDHEH 117
           L++P  F       +   V LK+P  +++ V   + D     F+ GW +FVK +SL+   
Sbjct: 37  LVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEND 96

Query: 118 LVLFEFKDASHFRVHIFDKSTLEIEYPSN 146
           L++F+F   S F V +FD  TL  E P++
Sbjct: 97  LLVFKFHGVSEFEVLVFDGQTL-CEKPTS 124