Miyakogusa Predicted Gene
- Lj0g3v0279449.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0279449.1 tr|A2Q1B8|A2Q1B8_MEDTR Homeobox domain, ZF-HD
class; ZF-HD homeobox protein Cys/His-rich dimerisatio,58.01,0,no
description,Homeodomain-like; Homeodomain-like,Homeodomain-like;
homeo_ZF_HD: homeobox domain, ZF,CUFF.18585.1
(260 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39760.1 | Symbols: AtHB23, HB23, ZHD10 | homeobox protein 23... 96 2e-20
AT3G28920.1 | Symbols: AtHB34, HB34, ZHD9 | homeobox protein 34 ... 91 1e-18
AT2G02540.1 | Symbols: ATHB21, ZFHD4, HB21, ZHD3 | homeobox prot... 86 3e-17
AT1G14440.2 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 ... 82 3e-16
AT1G14440.1 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 ... 82 3e-16
AT4G24660.1 | Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox prot... 82 3e-16
AT5G65410.1 | Symbols: ATHB25, ZFHD2, HB25, ZHD1 | homeobox prot... 82 4e-16
AT5G15210.1 | Symbols: ATHB30, ZFHD3, HB30, ZHD8 | homeobox prot... 79 2e-15
AT1G69600.1 | Symbols: ZFHD1, ATHB29, ZHD11 | zinc finger homeod... 78 6e-15
AT1G75240.1 | Symbols: AtHB33, HB33, ZHD5 | homeobox protein 33 ... 75 3e-14
AT2G18350.1 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 ... 75 4e-14
AT3G50890.1 | Symbols: AtHB28, HB28, ZHD7 | homeobox protein 28 ... 74 7e-14
AT5G60480.1 | Symbols: AtHB26, HB26, ZHD12 | homeobox protein 26... 72 5e-13
AT5G42780.1 | Symbols: AtHB27, HB27, ZHD13 | homeobox protein 27... 52 3e-07
>AT5G39760.1 | Symbols: AtHB23, HB23, ZHD10 | homeobox protein 23 |
chr5:15911543-15912547 FORWARD LENGTH=334
Length = 334
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRD 184
Q QKEKM +FAERVGWKMQK+DED V+DFC +IG+++ VLKVWMHNNKNTF +RD
Sbjct: 209 QFQKEKMHEFAERVGWKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRD 263
>AT3G28920.1 | Symbols: AtHB34, HB34, ZHD9 | homeobox protein 34 |
chr3:10940598-10941536 REVERSE LENGTH=312
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 132 QKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTF 180
QKEKM +FA+R+GWK+QK+DED V+DFC EIG+++GVLKVWMHNNKN+F
Sbjct: 203 QKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSF 251
>AT2G02540.1 | Symbols: ATHB21, ZFHD4, HB21, ZHD3 | homeobox protein
21 | chr2:684302-685234 FORWARD LENGTH=310
Length = 310
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QEQKEKM+ FAERVGWK+Q+++E VQ C EIGI R VLKVWMHNNK K+
Sbjct: 231 QEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQNLSKK 284
>AT1G14440.2 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 |
chr1:4939076-4940014 REVERSE LENGTH=312
Length = 312
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRD 184
EQKEKML FAE+VGWK+Q++++ VQ FC EIG++R VLKVWMHNNK F K++
Sbjct: 228 EQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIHFSKKN 281
>AT1G14440.1 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 |
chr1:4939076-4940014 REVERSE LENGTH=312
Length = 312
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRD 184
EQKEKML FAE+VGWK+Q++++ VQ FC EIG++R VLKVWMHNNK F K++
Sbjct: 228 EQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNKIHFSKKN 281
>AT4G24660.1 | Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox protein
22 | chr4:12724851-12725513 REVERSE LENGTH=220
Length = 220
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
EQKEKML FAER+GW++QK D+ V+ FC E G+ R VLK+WMHNNKN+ GK+
Sbjct: 167 EQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219
>AT5G65410.1 | Symbols: ATHB25, ZFHD2, HB25, ZHD1 | homeobox protein
25 | chr5:26136179-26137018 FORWARD LENGTH=279
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 43/52 (82%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGK 182
EQKE+ML AER+GW++Q++D++ +Q FC E G+ R VLKVW+HNNK+T GK
Sbjct: 201 EQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKHTLGK 252
>AT5G15210.1 | Symbols: ATHB30, ZFHD3, HB30, ZHD8 | homeobox protein
30 | chr5:4937874-4938689 REVERSE LENGTH=271
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 98 MLLALSTGLAAPPENAAGPXXXXXXXXXXXXXQEQKEKMLKFAERVGWKMQKKDEDFVQD 157
MLLALS G N A P Q QKEKM +F+ERVGW+M K D+ V++
Sbjct: 160 MLLALSGGRGG--ANTAVPMSRKRFRTKFS--QYQKEKMFEFSERVGWRMPKADDVVVKE 215
Query: 158 FCNEIGIERGVLKVWMHNNK 177
FC EIG+++ V KVWMHNNK
Sbjct: 216 FCREIGVDKSVFKVWMHNNK 235
>AT1G69600.1 | Symbols: ZFHD1, ATHB29, ZHD11 | zinc finger
homeodomain 1 | chr1:26182470-26183198 FORWARD
LENGTH=242
Length = 242
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTF 180
EQK KM FAE+ GWK+ DE V++FCNE+GIERGVLKVWMHNNK +
Sbjct: 166 EQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNKYSL 215
>AT1G75240.1 | Symbols: AtHB33, HB33, ZHD5 | homeobox protein 33 |
chr1:28241576-28242505 FORWARD LENGTH=309
Length = 309
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGK 182
+QKE+M+ FAE++GW+M K+DE+ ++ FC EIG++R V KVWMHNNKN K
Sbjct: 250 DQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKVWMHNNKNNAKK 301
>AT2G18350.1 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 |
chr2:7971122-7971910 REVERSE LENGTH=262
Length = 262
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRD 184
+EQKEKM++FAE++GW+M K ++D V FC EI ++R V KVWMHNNK K+D
Sbjct: 207 EEQKEKMMEFAEKIGWRMTKLEDDEVNRFCREIKVKRQVFKVWMHNNKQAAKKKD 261
>AT3G50890.1 | Symbols: AtHB28, HB28, ZHD7 | homeobox protein 28 |
chr3:18916420-18917169 FORWARD LENGTH=249
Length = 249
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRDGS 186
+EQKEKM +FAER+GW+MQKKDE+ + FC + + R V KVWMHNNK KR+ S
Sbjct: 190 EEQKEKMKEFAERLGWRMQKKDEEEIDKFCRMVNLRRQVFKVWMHNNKQAM-KRNNS 245
>AT5G60480.1 | Symbols: AtHB26, HB26, ZHD12 | homeobox protein 26 |
chr5:24323594-24324169 FORWARD LENGTH=191
Length = 191
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNK 177
EQK KM FAER GWK+ DE +V++FC+E+GIER VLKVW+HNNK
Sbjct: 125 EQKVKMRGFAERAGWKINGWDEKWVREFCSEVGIERKVLKVWIHNNK 171
>AT5G42780.1 | Symbols: AtHB27, HB27, ZHD13 | homeobox protein 27 |
chr5:17154841-17155569 FORWARD LENGTH=242
Length = 242
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKN 178
EQ EKM +AE++ WK++ + ++ V++FC EIG+ R ++WM+N+K+
Sbjct: 189 EQTEKMRDYAEKLRWKVRPERQEEVEEFCVEIGVNRKNFRIWMNNHKD 236