Miyakogusa Predicted Gene
- Lj0g3v0278959.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0278959.1 tr|G7J3H4|G7J3H4_MEDTR Class III HD-Zip protein
OS=Medicago truncatula GN=MTR_3g109800 PE=3
SV=1,96.43,9.80909e-45,MEKHLA,MEKHLA,CUFF.18561.1
(84 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu... 174 8e-45
AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu... 174 8e-45
AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8 | c... 155 7e-39
AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-l... 130 2e-31
AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper ... 127 2e-30
AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper fami... 126 3e-30
AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu... 74 1e-14
>AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein | chr1:19409913-19413961
REVERSE LENGTH=837
Length = 837
Score = 174 bits (442), Expect = 8e-45, Method: Composition-based stats.
Identities = 76/84 (90%), Positives = 82/84 (97%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERAV 60
MLETTLVALQDI+LEKIFDDNG+K LCSEFPQIMQQGF C+QGGICLSSMGRP+SYERAV
Sbjct: 754 MLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 813
Query: 61 AWKVLNEEESAHCICFMFINWSFV 84
AWKVLNEEE+AHCICF+FINWSFV
Sbjct: 814 AWKVLNEEENAHCICFVFINWSFV 837
>AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein | chr1:19409913-19413961
REVERSE LENGTH=836
Length = 836
Score = 174 bits (442), Expect = 8e-45, Method: Composition-based stats.
Identities = 76/84 (90%), Positives = 82/84 (97%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERAV 60
MLETTLVALQDI+LEKIFDDNG+K LCSEFPQIMQQGF C+QGGICLSSMGRP+SYERAV
Sbjct: 753 MLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 812
Query: 61 AWKVLNEEESAHCICFMFINWSFV 84
AWKVLNEEE+AHCICF+FINWSFV
Sbjct: 813 AWKVLNEEENAHCICFVFINWSFV 836
>AT4G32880.1 | Symbols: ATHB-8, ATHB8, HB-8 | homeobox gene 8 |
chr4:15863587-15867822 REVERSE LENGTH=833
Length = 833
Score = 155 bits (391), Expect = 7e-39, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Query: 1 MLETTLVALQDITLEKIFDDN-GKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERA 59
MLETTLVALQDITL+KIFD+N GKK L SEFPQIMQQGFMCM GGIC+SSMGR ++YE+A
Sbjct: 749 MLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKA 808
Query: 60 VAWKVLNEEESAHCICFMFINWSFV 84
V WKVLN++E HCICFMF+NWSF+
Sbjct: 809 VGWKVLNDDEDPHCICFMFLNWSFI 833
>AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D |
Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein | chr2:14639548-14643993
REVERSE LENGTH=852
Length = 852
Score = 130 bits (327), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERAV 60
MLETTLVALQDI L+K D+ G+K LCSEFP+IMQQG+ + G+C SSMGR +SYE+A
Sbjct: 769 MLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQAT 828
Query: 61 AWKVLNEEESAHCICFMFINWSFV 84
WKVL ++ES HC+ FMF+NWSFV
Sbjct: 829 VWKVLEDDESNHCLAFMFVNWSFV 852
>AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper
family protein / lipid-binding START domain-containing
protein | chr5:24397734-24401933 FORWARD LENGTH=842
Length = 842
Score = 127 bits (319), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 71/88 (80%), Gaps = 4/88 (4%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERAV 60
MLETTLVALQDITLEKIFD++G+K +CS+F ++MQQGF C+ GIC+S+MGR +SYE+AV
Sbjct: 755 MLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAV 814
Query: 61 AWKVLNEEE----SAHCICFMFINWSFV 84
AWKV E + HC+ F F+NWSFV
Sbjct: 815 AWKVFAASEENNNNLHCLAFSFVNWSFV 842
>AT1G30490.1 | Symbols: PHV, ATHB9 | Homeobox-leucine zipper family
protein / lipid-binding START domain-containing protein
| chr1:10796328-10800744 REVERSE LENGTH=841
Length = 841
Score = 126 bits (316), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQGFMCMQGGICLSSMGRPISYERAV 60
MLETTLVALQDI L+K DD+G++ LCSEF +IMQQG+ + GIC+SSMGRP+SYE+A
Sbjct: 758 MLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQAT 817
Query: 61 AWKVLNEEESAHCICFMFINWSFV 84
WKV+++ ES HC+ F ++WSFV
Sbjct: 818 VWKVVDDNESNHCLAFTLVSWSFV 841
>AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein | chr1:19410118-19413961
REVERSE LENGTH=794
Length = 794
Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 1 MLETTLVALQDITLEKIFDDNGKKILCSEFPQIMQQ 36
MLETTLVALQDI+LEKIFDDNG+K LCSEFPQIMQQ
Sbjct: 753 MLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQ 788